View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5826-4 (Length: 146)

Name: Solexa-NF5826-4
Description: NF5826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5826-4
Solexa-NF5826-4
[»] chr4 (31 HSPs)
chr4 (14-146)||(12402532-12402664)
chr4 (9-146)||(22134053-22134190)
chr4 (9-146)||(22782173-22782310)
chr4 (9-146)||(16933584-16933721)
chr4 (20-146)||(22046151-22046277)
chr4 (9-146)||(11008004-11008141)
chr4 (9-146)||(12395296-12395432)
chr4 (9-146)||(12400258-12400394)
chr4 (9-146)||(9175908-9176045)
chr4 (20-145)||(47563526-47563651)
chr4 (14-146)||(3578130-3578262)
chr4 (14-146)||(18536940-18537072)
chr4 (14-146)||(5136735-5136867)
chr4 (14-146)||(5872458-5872590)
chr4 (9-145)||(36920935-36921071)
chr4 (14-146)||(52094755-52094887)
chr4 (30-145)||(10113639-10113754)
chr4 (22-145)||(14788870-14788993)
chr4 (14-133)||(22802186-22802305)
chr4 (14-146)||(8394061-8394193)
chr4 (14-146)||(7123351-7123483)
chr4 (14-146)||(12743321-12743453)
chr4 (14-113)||(36379049-36379148)
chr4 (20-145)||(16454074-16454199)
chr4 (42-132)||(4588623-4588713)
chr4 (22-128)||(9224978-9225084)
chr4 (14-139)||(26558352-26558477)
chr4 (37-113)||(5207089-5207165)
chr4 (22-128)||(16624579-16624685)
chr4 (34-131)||(42191445-42191542)
chr4 (86-143)||(5350578-5350635)
[»] chr8 (16 HSPs)
chr8 (16-146)||(15069335-15069465)
chr8 (9-146)||(18811469-18811606)
chr8 (9-146)||(27827746-27827883)
chr8 (9-146)||(43080363-43080500)
chr8 (14-146)||(31577730-31577861)
chr8 (14-146)||(34255899-34256031)
chr8 (16-144)||(21481264-21481392)
chr8 (14-145)||(41383419-41383550)
chr8 (30-144)||(17848308-17848422)
chr8 (14-146)||(4732301-4732433)
chr8 (14-132)||(5591528-5591646)
chr8 (22-128)||(10684838-10684944)
chr8 (22-128)||(35744797-35744903)
chr8 (20-128)||(18853735-18853843)
chr8 (22-128)||(6813100-6813206)
chr8 (33-125)||(26300748-26300840)
[»] chr5 (30 HSPs)
chr5 (9-146)||(18467390-18467527)
chr5 (9-146)||(34478855-34478992)
chr5 (14-146)||(10750409-10750541)
chr5 (9-146)||(6745774-6745911)
chr5 (9-146)||(15356285-15356422)
chr5 (9-146)||(23665752-23665889)
chr5 (9-146)||(31543439-31543576)
chr5 (9-143)||(658724-658858)
chr5 (14-146)||(29721018-29721150)
chr5 (14-146)||(9788614-9788746)
chr5 (29-146)||(20043710-20043827)
chr5 (14-146)||(26171410-26171542)
chr5 (9-145)||(27911138-27911274)
chr5 (14-146)||(16407978-16408110)
chr5 (14-146)||(40380759-40380891)
chr5 (15-145)||(25806173-25806303)
chr5 (14-146)||(16545080-16545215)
chr5 (41-145)||(18510851-18510955)
chr5 (33-146)||(534421-534534)
chr5 (33-132)||(42427838-42427937)
chr5 (22-128)||(33790722-33790828)
chr5 (22-128)||(37557198-37557304)
chr5 (14-146)||(13694534-13694666)
chr5 (22-128)||(27449229-27449335)
chr5 (22-128)||(43598139-43598245)
chr5 (22-128)||(43603631-43603737)
chr5 (22-128)||(43609123-43609229)
chr5 (83-146)||(13294851-13294914)
chr5 (22-128)||(31397566-31397672)
chr5 (27-146)||(34842005-34842124)
[»] chr3 (44 HSPs)
chr3 (9-146)||(456592-456729)
chr3 (9-146)||(10957759-10957896)
chr3 (9-146)||(43226762-43226899)
chr3 (9-146)||(4309946-4310083)
chr3 (9-146)||(5192335-5192472)
chr3 (9-146)||(6065229-6065366)
chr3 (9-146)||(11168786-11168923)
chr3 (9-146)||(18098607-18098744)
chr3 (9-146)||(5898094-5898231)
chr3 (9-145)||(3315367-3315503)
chr3 (14-146)||(7769245-7769377)
chr3 (29-146)||(23634150-23634267)
chr3 (14-146)||(23199531-23199663)
chr3 (9-145)||(42990984-42991120)
chr3 (16-145)||(28101445-28101574)
chr3 (20-145)||(43422907-43423030)
chr3 (14-146)||(5259715-5259847)
chr3 (14-146)||(27421328-27421460)
chr3 (14-146)||(10209844-10209976)
chr3 (14-146)||(37407332-37407464)
chr3 (14-145)||(53917111-53917242)
chr3 (14-132)||(4600126-4600244)
chr3 (36-146)||(25634589-25634699)
chr3 (14-146)||(10056888-10057020)
chr3 (14-146)||(10061332-10061464)
chr3 (14-146)||(10063554-10063686)
chr3 (14-146)||(10065776-10065908)
chr3 (14-132)||(22834415-22834533)
chr3 (14-146)||(10059110-10059242)
chr3 (29-120)||(1619936-1620027)
chr3 (14-132)||(6717156-6717274)
chr3 (14-146)||(9635516-9635648)
chr3 (14-146)||(7762914-7763046)
chr3 (34-146)||(29811532-29811644)
chr3 (33-132)||(32891752-32891851)
chr3 (14-132)||(15830648-15830766)
chr3 (29-128)||(32479747-32479846)
chr3 (14-109)||(53597916-53598011)
chr3 (22-128)||(8516501-8516607)
chr3 (14-128)||(23409742-23409856)
chr3 (55-132)||(15822092-15822169)
chr3 (22-128)||(3324121-3324228)
chr3 (34-128)||(16263770-16263863)
chr3 (33-146)||(30844936-30845049)
[»] chr1 (29 HSPs)
chr1 (9-146)||(28841128-28841265)
chr1 (9-146)||(51750743-51750880)
chr1 (14-146)||(16226879-16227011)
chr1 (9-144)||(51758240-51758375)
chr1 (9-146)||(20300837-20300974)
chr1 (9-146)||(28203135-28203272)
chr1 (24-146)||(27338569-27338691)
chr1 (9-146)||(47178068-47178205)
chr1 (14-145)||(6996295-6996426)
chr1 (17-146)||(8348501-8348630)
chr1 (9-145)||(31736913-31737049)
chr1 (9-144)||(25250719-25250854)
chr1 (14-146)||(3805574-3805706)
chr1 (14-146)||(50078230-50078362)
chr1 (14-132)||(28222828-28222946)
chr1 (54-146)||(16429699-16429791)
chr1 (14-146)||(50168743-50168874)
chr1 (14-132)||(3157306-3157424)
chr1 (14-132)||(31657847-31657965)
chr1 (21-146)||(13127171-13127296)
chr1 (20-141)||(28997696-28997817)
chr1 (20-141)||(29003412-29003533)
chr1 (14-132)||(16456361-16456479)
chr1 (22-128)||(41397646-41397752)
chr1 (9-143)||(31424473-31424595)
chr1 (22-128)||(47099392-47099498)
chr1 (22-125)||(19359412-19359515)
chr1 (29-146)||(17346095-17346212)
chr1 (27-131)||(33094279-33094383)
[»] scaffold0140 (1 HSPs)
scaffold0140 (9-146)||(22832-22969)
[»] chr7 (35 HSPs)
chr7 (9-146)||(36165-36302)
chr7 (9-146)||(7093897-7094034)
chr7 (9-146)||(38394701-38394838)
chr7 (9-146)||(1048725-1048862)
chr7 (9-146)||(7351087-7351224)
chr7 (9-146)||(22135518-22135655)
chr7 (9-146)||(40550545-40550682)
chr7 (9-146)||(44725290-44725427)
chr7 (16-145)||(24749309-24749438)
chr7 (9-146)||(13289935-13290072)
chr7 (20-145)||(7471418-7471543)
chr7 (27-145)||(20298048-20298166)
chr7 (61-146)||(31159138-31159223)
chr7 (15-145)||(28486286-28486416)
chr7 (21-122)||(4295401-4295502)
chr7 (16-145)||(21678781-21678910)
chr7 (14-146)||(24816806-24816932)
chr7 (14-146)||(6593926-6594058)
chr7 (14-146)||(18391564-18391696)
chr7 (14-146)||(48490048-48490180)
chr7 (14-132)||(47675544-47675662)
chr7 (14-140)||(6047204-6047330)
chr7 (22-128)||(12405744-12405850)
chr7 (22-128)||(24261897-24262003)
chr7 (34-144)||(26213460-26213569)
chr7 (22-128)||(16884334-16884440)
chr7 (31-132)||(6570647-6570748)
chr7 (22-128)||(5817759-5817865)
chr7 (22-128)||(18413065-18413171)
chr7 (29-128)||(49091084-49091183)
chr7 (22-128)||(21645432-21645538)
chr7 (35-128)||(21988327-21988420)
chr7 (35-146)||(3890827-3890938)
chr7 (34-113)||(3903899-3903978)
chr7 (29-128)||(9185738-9185837)
[»] chr2 (13 HSPs)
chr2 (9-146)||(35217406-35217543)
chr2 (9-146)||(36560577-36560714)
chr2 (14-146)||(22405366-22405498)
chr2 (9-146)||(21520130-21520267)
chr2 (9-146)||(19503772-19503909)
chr2 (14-146)||(6263590-6263722)
chr2 (9-128)||(34574612-34574731)
chr2 (22-128)||(19348684-19348790)
chr2 (22-128)||(25403057-25403163)
chr2 (14-143)||(28569864-28569993)
chr2 (29-128)||(23079048-23079147)
chr2 (22-128)||(10446014-10446120)
chr2 (61-144)||(42019284-42019367)
[»] scaffold0011 (1 HSPs)
scaffold0011 (29-146)||(34276-34393)
[»] chr6 (23 HSPs)
chr6 (9-146)||(33309595-33309732)
chr6 (9-146)||(26067831-26067968)
chr6 (9-146)||(26931999-26932136)
chr6 (14-145)||(3395107-3395238)
chr6 (16-146)||(12936685-12936815)
chr6 (9-144)||(17012769-17012904)
chr6 (14-146)||(5408462-5408594)
chr6 (14-146)||(5412787-5412919)
chr6 (9-145)||(15534039-15534175)
chr6 (14-144)||(12157962-12158092)
chr6 (16-146)||(25462901-25463031)
chr6 (14-140)||(26944235-26944361)
chr6 (29-145)||(3631380-3631496)
chr6 (14-146)||(16553319-16553451)
chr6 (14-146)||(16629875-16630007)
chr6 (14-146)||(16651579-16651711)
chr6 (14-146)||(34165527-34165659)
chr6 (62-146)||(12911009-12911093)
chr6 (14-146)||(30444004-30444136)
chr6 (29-128)||(33331027-33331126)
chr6 (22-128)||(14738146-14738252)
chr6 (26-128)||(18232267-18232369)
chr6 (22-128)||(9035704-9035810)
[»] scaffold1899 (1 HSPs)
scaffold1899 (9-146)||(330-467)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-146)||(72953-73090)
[»] scaffold0133 (1 HSPs)
scaffold0133 (9-144)||(26328-26463)
[»] scaffold0004 (1 HSPs)
scaffold0004 (9-145)||(80572-80708)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-145)||(50737-50860)
[»] scaffold1674 (1 HSPs)
scaffold1674 (9-142)||(892-1025)
[»] scaffold0016 (1 HSPs)
scaffold0016 (14-146)||(115246-115378)
[»] scaffold0197 (1 HSPs)
scaffold0197 (22-128)||(14883-14989)
[»] scaffold0355 (1 HSPs)
scaffold0355 (25-128)||(454-557)
[»] scaffold0028 (1 HSPs)
scaffold0028 (22-128)||(149529-149635)
[»] scaffold0219 (1 HSPs)
scaffold0219 (35-133)||(26822-26920)
[»] scaffold0006 (1 HSPs)
scaffold0006 (31-128)||(1914-2011)
[»] scaffold0188 (1 HSPs)
scaffold0188 (22-128)||(18518-18624)
[»] scaffold1991 (1 HSPs)
scaffold1991 (55-128)||(1028-1101)
[»] scaffold0184 (1 HSPs)
scaffold0184 (73-128)||(30108-30163)
[»] scaffold0078 (1 HSPs)
scaffold0078 (73-128)||(42681-42736)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 2e-62; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 12402664 - 12402532
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12402664 aggaaccaaccgtgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 12402565  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||| |||||||||||||||||    
T  12402564 caggatggtggagtcgaaggccatcatggagca 12402532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 22134190 - 22134053
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22134190 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttttatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 22134091  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22134090 tcattcaggatggtagagtcaaaggccatcatggagca 22134053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 22782310 - 22782173
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22782310 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctac 22782211  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22782210 tcattcaggatggtagagtcaaaggccatcatggagca 22782173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 16933721 - 16933584
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  16933721 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaaacaacgactctac 16933622  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||  |||||||||||||||||||||||    
T  16933621 tcattcaggatggaagagtcaaaggccatcatggagca 16933584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 22046277 - 22046151
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    ||||| || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22046277 caacctcggcatcgatgtgggcaaatttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctactcattcaggat 22046178  T
Q  120 ggtggagtcaaaggccatcatggagca 146  Q
    ||| |||||||||||||||||||||||    
T  22046177 ggtagagtcaaaggccatcatggagca 22046151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 11008141 - 11008004
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||    
T  11008141 agcaaaggaagcaaccgcggcatcgatgtgggaaaagatggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgaatctac 11008042  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11008041 tcattcaggatggtagagtcaaaggccatcatggagca 11008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 12395432 - 12395296
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  12395432 agcaaaggagccaaccgtgacatcgatgtgggcaaagttggaatctttgtat-tgaaaaagtctttggctcatcggcaattcctaaagcaacaactctac 12395334  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||||| || |||||||||||||||||    
T  12395333 tcattcaggatggtggaatcgaaggccatcatggagca 12395296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 12400394 - 12400258
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  12400394 agcaaaggagccaaccgtgacatcgatgtgggcaaagttggaatctttgtat-tgaaaaagtctttggctcatcggcaattcctaaagcaacaactctac 12400296  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||||| || |||||||||||||||||    
T  12400295 tcattcaggatggtggaatcgaaggccatcatggagca 12400258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 9176045 - 9175908
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| ||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  9176045 agcaaaggaagcaaccacgacatcgatgtgggaaaagtgggaatctttgtatatgacaaagtctttggctgatcggcaattcctaaagcaacgactctac 9175946  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||  || ||||||||||||||||||||    
T  9175945 tcattcaggatggaagactcaaaggccatcatggagca 9175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 47563526 - 47563651
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||    
T  47563526 caaccgcgacatcgatgtgggaaaagttggaatctttgtatatgacaaagtcgttggctcatcgacaattcctaaagcaacaactttactcattcaagat 47563625  T
Q  120 ggtggagtcaaaggccatcatggagc 145  Q
    |||  | | |||||||||||||||||    
T  47563626 ggtaaatttaaaggccatcatggagc 47563651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 3578262 - 3578130
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||| |||||| ||| |  ||||||||||||||||||||||    
T  3578262 aggaaccaaccgcgacatcgatgtggtcaaagttggagtctttatatatgacaaagtctttggatcatcgccaacttttaaagcaacaactctactcatt 3578163  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||| ||||| |||||||||||||    
T  3578162 caagatggtggagacaaagtccatcatggagca 3578130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 18537072 - 18536940
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||| |||| ||||||||||| ||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18537072 aggaaccaatcgcggcatcgatgtggtcaaagttcgtatatttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactttactcatt 18536973  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||  ||||| |||||||||||||||||    
T  18536972 caagatggaagagtcgaaggccatcatggagca 18536940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 5136735 - 5136867
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  5136735 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 5136834  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  5136835 caagatggtggagtcaaagaccgtgatggagca 5136867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 5872458 - 5872590
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| | ||||||||| |||||||||| || ||| | ||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  5872458 aggaaccaaccgcgccgtcgatgtggtcaaagttggagtcgttgcatatgaccaagtctttggctcataggcaattccttaagcaacaaatctactcatt 5872557  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| |||| ||||||||    
T  5872558 caagatggtggagtcaaagaccatgatggagca 5872590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 36921071 - 36920935
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||| |||| |||| ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| ||||| || ||||||||||||| |||    
T  36921071 agcaaaggatccaatcgcggcatcgatgtggtcaaagtttgaatatttgtatatgacaaagtctttggctcattggcaagtcttaaagcaacaactttac 36920972  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| ||||||  |||||||||||||||||||||    
T  36920971 tcattcaagatggtaaagtcaaaggccatcatggagc 36920935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 52094887 - 52094755
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||||| ||||||||||| |||||||||| || ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  52094887 aggaacctaccgcggcatcgatgtggtcaaagttggagtcattgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 52094788  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||| |||||| || | ||||||||    
T  52094787 caagatggtggattcaaagaccgtgatggagca 52094755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 10113639 - 10113754
Alignment:
Q  30 atcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtca 129  Q
    |||||||||| |||||||||| || ||||| ||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||| || ||||||||||    
T  10113639 atcgatgtggtcaaagttggagtcattgtatatgactaagtctttggctcacaggcaattcctaaatcaacaactctactcattcaagacggtggagtca 10113738  T
Q  130 aaggccatcatggagc 145  Q
    ||||||||||||||||    
T  10113739 aaggccatcatggagc 10113754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 14788993 - 14788870
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||| ||||| | |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  14788993 accgcggcatcgatgtggtcaaagatcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcattcaagatgg 14788894  T
Q  122 tggagtcaaaggccatcatggagc 145  Q
    |  |||||||||| ||||||||||    
T  14788893 taaagtcaaaggctatcatggagc 14788870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 22802305 - 22802186
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| ||||||||||||| |||||| ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  22802305 aggaaacaaccgcgacatcaatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcatt 22802206  T
Q  114 caggatggtggagtcaaagg 133  Q
    || ||||||  |||||||||    
T  22802205 caagatggtaaagtcaaagg 22802186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 8394061 - 8394193
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  8394061 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattcctcaagcaacaactctactcatt 8394160  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  8394161 caagatggtggagtcaaagaccgtgatggagca 8394193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 7123351 - 7123483
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||| |||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  7123351 aggaaccaaacgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcatt 7123450  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  7123451 caagatggtggagtcaaagaccgtgatggagca 7123483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 12743453 - 12743321
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||||| | ||||||||| |||||||| |||| ||||| ||||| |||||||||||| || |||||||||| ||| ||||||| ||||||||    
T  12743453 aggaacctaccgcggcgtcgatgtggtcaaagttgaaatcattgtatatgaccaagtctttggcttataggcaattccttaagaaacaactatactcatt 12743354  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  12743353 caagatggtggagtcaaagaccgtgatggagca 12743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 36379049 - 36379148
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||| | ||||||||| | ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  36379049 aggaaccaaccgtggcatcgatgtagtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcatt 36379148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 16454074 - 16454199
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    |||||||||||||||||||| |||| || |||| |||||| | ||||||| ||||||||||||| ||| |||||||||||||||| |||| ||||| |||    
T  16454074 caaccgcgacatcgatgtggtcaaattttgaatatttgtatacgacaaagactttggctcatcgacaagtcctaaagcaacaactttactaattcaagat 16454173  T
Q  120 ggtggagtcaaaggccatcatggagc 145  Q
    |||  |||||||||||| ||| ||||    
T  16454174 ggtaaagtcaaaggccaccatagagc 16454199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 4588623 - 4588713
Alignment:
Q  42 aaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    ||||||||| || ||||| ||||| || |||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  4588623 aaagttggagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaattctactcattcaagatggtggagtcaaag 4588713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 9224978 - 9225084
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  9224978 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 9225077  T
Q  122 tggagtc 128  Q
    |||||||    
T  9225078 tggagtc 9225084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 26558352 - 26558477
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||| ||| ||| |||||||||| || ||||| ||||| |  || |||||| ||  |||||| | |||||| ||||||||||||||    
T  26558352 aggaaccaaccgcggcatggatatggtcaaagttggagtcgttgtatatgaccatatccttggcttatatgcaatttcgaaagcatcaactctactcatt 26558451  T
Q  114 caggatggtggagtcaaaggccatca 139  Q
    || |||||||||||||||||||||||    
T  26558452 caagatggtggagtcaaaggccatca 26558477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 5207165 - 5207089
Alignment:
Q  37 tgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| | ||| ||||||| |||||| ||||||||||    
T  5207165 tgggcaaagttggagtctttgtatatgacaaagtctttggctcatagacaaatcctaaatcaacaaatctactcatt 5207089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 16624579 - 16624685
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || || ||||||||| || || || | || ||||||||||| ||||||| |||||    
T  16624579 accgcggcatcgatgtgggctaagttggagtcattgtacatgacgaaatcgttggctcataggaaactcttgaaacaacaactctattcattcaagatgg 16624678  T
Q  122 tggagtc 128  Q
    |||||||    
T  16624679 tggagtc 16624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 42191542 - 42191445
Alignment:
Q  34 atgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaa 131  Q
    |||||||| ||||| || || || || ||||| ||||| |||| |||| | ||||||||||| ||| ||||||||||||| ||||| |||||||||||    
T  42191542 atgtgggctaagttagagtcattatacatgaccaagtcgttggttcatagtcaattcctaaaacaaaaactctactcatttaggatagtggagtcaaa 42191445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 5350578 - 5350635
Alignment:
Q  86 aattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatgga 143  Q
    ||||| |||| ||||||||||||||||| | || |||||||||||| ||| |||||||    
T  5350578 aattcttaaaacaacaactctactcatttaagaaggtggagtcaaatgccgtcatgga 5350635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 4e-61; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 15069335 - 15069465
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15069335 gaaccaactgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 15069434  T
Q  116 ggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||||||||||||||    
T  15069435 ggatggtggagtcaaaggccatcatggagca 15069465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 18811469 - 18811606
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18811469 agcaaaggaagcaaccgcggcatcgatgtgggcaaagatggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 18811568  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18811569 tcattcaggatggtagagtcaaaggccatcatggagca 18811606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 27827746 - 27827883
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  27827746 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctac 27827845  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27827846 tcattcaggatggtagagtcaaaggccatcatggagca 27827883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 43080363 - 43080500
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43080363 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaaacaacgactctac 43080462  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||  |||||||||||||||||||||||    
T  43080463 tcattcaggatggaagagtcaaaggccatcatggagca 43080500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 31577861 - 31577730
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||  ||| ||||||||||| |||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  31577861 aggaaccaattgcgtcatcgatgtggtcaaagttggagtctgtgtatatgacaaagtctttggctcttcggcaattcctaaagcaacaactctact-att 31577763  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||| |||||||||||||||    
T  31577762 caagatggtggagtcaatggccatcatggagca 31577730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 34256031 - 34255899
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||||| |||||||||||| |||||||||| || ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  34256031 aggaaccaaccgcaacatcgatgtggtcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 34255932  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  34255931 caagatggtggagtcaaagaccgtgatggagca 34255899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 21481264 - 21481392
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    ||||||||||||||||| |||||| ||||||| |||| |||||| ||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||    
T  21481264 gaaccaaccgcgacatcaatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcgccaattcctaaagaaacaattttactcattca 21481363  T
Q  116 ggatggtggagtcaaaggccatcatggag 144  Q
     |||||| ||||||||| |||||||||||    
T  21481364 agatggtagagtcaaagaccatcatggag 21481392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 41383419 - 41383550
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||||||||||||||||||| |||||||  ||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  41383419 aggaaacaaccgcgacatcgatgtggtcaaagttcaaatatttgtatatgacaaagtctttgactcatcggcaagtcctaaagcaacaactttactcatt 41383518  T
Q  114 caggatggtggagtcaaaggccatcatggagc 145  Q
       ||||||  |||||||||| ||||||||||    
T  41383519 tgagatggtaaagtcaaaggctatcatggagc 41383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 17848308 - 17848422
Alignment:
Q  30 atcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtca 129  Q
    |||||||||| |||||||||| |||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||    
T  17848308 atcgatgtggtcaaagttggagtctttgtatatgacaatctctttggctcatcggaaattcctaaagcaacaactctactcattgaagatgttggagtca 17848407  T
Q  130 aaggccatcatggag 144  Q
    |||  ||||||||||    
T  17848408 aagttcatcatggag 17848422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 4732301 - 4732433
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||| | | ||||||||| ||||||||||  | ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4732301 aggaacctaccgtggcgtcgatgtggtcaaagttggagacattgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 4732400  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  4732401 caagatggtggagtcaaagaccgtgatggagca 4732433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 5591528 - 5591646
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| | ||||||||| |||||||||| || ||||| ||||  ||||||||||||||| |||||||||| |||||||||||||| |||||    
T  5591528 aggaaccaaccgcggcgtcgatgtggtcaaagttggagtcattgtatatgatcaagtctttggctcataggcaattccttaagcaacaactctattcatt 5591627  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||| ||||    
T  5591628 caagatggtggagttaaag 5591646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 10684838 - 10684944
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  10684838 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 10684937  T
Q  122 tggagtc 128  Q
    |||||||    
T  10684938 tggagtc 10684944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 35744903 - 35744797
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| | ||| || | |||||||||||||||||||||| |||||    
T  35744903 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatgg 35744804  T
Q  122 tggagtc 128  Q
    |||||||    
T  35744803 tggagtc 35744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 18853735 - 18853843
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    |||||||| ||||||||||||| || ||||| || ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| |||    
T  18853735 caaccgcggcatcgatgtgggctaaattggagtcattgtatatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagat 18853834  T
Q  120 ggtggagtc 128  Q
    |||||||||    
T  18853835 ggtggagtc 18853843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 6813206 - 6813100
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    ||||||||||| |||||||| |||||||| || ||||| ||||| || || ||||||||| || || || | || ||||||||||||||||| | |||||    
T  6813206 accgcgacatcaatgtgggctaagttggagtcattgtacatgacgaaatcgttggctcataggaaactcttgaaacaacaactctactcattgaagatgg 6813107  T
Q  122 tggagtc 128  Q
    |||||||    
T  6813106 tggagtc 6813100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 26300840 - 26300748
Alignment:
Q  33 gatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtgga 125  Q
    ||||||||| |||||||| || ||||| |||||||| |||||||||||| | ||| || | || ||||||||||| ||||||| | |||||||    
T  26300840 gatgtgggctaagttggagtcattgtacatgacaaaatctttggctcatagacaactcttgaaacaacaactctattcattcaaggtggtgga 26300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 1e-60; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 18467390 - 18467527
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18467390 agcaaaggaacgaaccgcgacatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 18467489  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18467490 tcattcaggatggtggagtcaaagaccatcatggagca 18467527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 34478992 - 34478855
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34478992 agcaaaggaagcaaccgcgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctac 34478893  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34478892 tcattcaggatggtagagtcaaaggccatcatggagca 34478855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 6e-60
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10750409 - 10750541
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10750409 aggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 10750508  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||| |||||||||||||||||||||||    
T  10750509 caggatggtagagtcaaaggccatcatggagca 10750541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 6745774 - 6745911
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6745774 agcaaaggaacgaaccgcggcatcaatgtgggcaaagttgtaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 6745873  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6745874 tcattcaggatggtggagtcaaaggccatcatggagca 6745911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 15356422 - 15356285
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15356422 agcaaaggaagcaaccgcggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 15356323  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15356322 tcattcaggatggtagagtcaaaggccatcatggagca 15356285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 23665752 - 23665889
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23665752 agcaaaggaagcaaccgcggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 23665851  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23665852 tcattcaggatggtagagtcaaaggccatcatggagca 23665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 31543439 - 31543576
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  31543439 agcaaaggaagcaaccgcgacatcgatgtgggcaaagttagaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctac 31543538  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||  |||||||||||||||||||||||    
T  31543539 tcattcaagatggaagagtcaaaggccatcatggagca 31543576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 8e-47
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 658724 - 658858
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||    
T  658724 agcaaaggaaccaaccgcgacatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttac 658823  T
Q  109 tcattcaggatggtggagtcaaaggccatcatgga 143  Q
    ||||||| ||||||  |||||||||||||||||||    
T  658824 tcattcaagatggtaaagtcaaaggccatcatgga 658858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 29721018 - 29721150
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  29721018 aggaaccaaccgcggcatcgatgtggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 29721117  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  29721118 caagatggtggagtcaaagaccgtgatggagca 29721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 9788746 - 9788614
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9788746 aggaaccaaccgcggcatcgatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 9788647  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  9788646 caagatggtggagtcaaagaccgtgatggagca 9788614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 20043710 - 20043827
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||| | ||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||||    
T  20043710 catcgatgtagtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactttactcattcaagatggcagagtc 20043809  T
Q  129 aaaggccatcatggagca 146  Q
    ||||||||||||||||||    
T  20043810 aaaggccatcatggagca 20043827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 26171410 - 26171542
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||| | ||||||| ||| ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  26171410 aggaaccaaccgtggcatcgatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 26171509  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  26171510 caagatggtggagtcaaagaccgtgatggagca 26171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 27911138 - 27911274
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||| ||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||| || |||||||||||||||| |||    
T  27911138 agcaaaggaatcaactgcggcatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggaaagtcctaaagcaacaactttac 27911237  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| ||||||  |||||||||| ||||||||||    
T  27911238 tcattcaagatggtaaagtcaaaggctatcatggagc 27911274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16407978 - 16408110
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||||||  |||||| ||  ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  16407978 aggaaccaaccgcggaatcgatatgatcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 16408077  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||||| |||| || | ||||||||    
T  16408078 caagatggtggagtaaaagaccgtgatggagca 16408110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 40380759 - 40380891
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  40380759 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcatt 40380858  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  40380859 caagatggtggagtcaaagaccgtgatggagca 40380891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 25806173 - 25806303
Alignment:
Q  15 ggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattc 114  Q
    |||| |||||||  ||||||||||| ||||||| |||| |||||| || |||||||||||||||||| || || |||||||||||||||| |||||||||    
T  25806173 ggaaacaaccgcagcatcgatgtggtcaaagttcgaatatttgtatattacaaagtctttggctcattggaaagtcctaaagcaacaactttactcattc 25806272  T
Q  115 aggatggtggagtcaaaggccatcatggagc 145  Q
    | ||||||  |||||||||| ||||||||||    
T  25806273 aagatggtaaagtcaaaggctatcatggagc 25806303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16545080 - 16545215
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaa---gtctttggctcatcggcaattcctaaagcaacaactctactc 110  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||   ||| ||||||||| |||||||||| |||||||||||||||||    
T  16545080 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaacaagtcgttggctcataggcaattccttaagcaacaactctactc 16545179  T
Q  111 attcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||| |||||||||||||||| || | ||||||||    
T  16545180 attcaagatggtggagtcaaagaccgtgatggagca 16545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 18510955 - 18510851
Alignment:
Q  41 caaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcat 140  Q
    ||||||| |||| |||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||  |||||||||| |||||    
T  18510955 caaagttcgaatatttgtatatgacaaagtctttggcttatcggcaagtcctaaagcaacaactttactcattcaagatggtaaagtcaaaggctatcat 18510856  T
Q  141 ggagc 145  Q
    |||||    
T  18510855 ggagc 18510851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 534421 - 534534
Alignment:
Q  33 gatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    ||||||| |||||||||| || ||||| ||||| |||||||||| | || |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  534421 gatgtggtcaaagttggagtcattgtatatgaccaagtctttggttgataggcaattccttaagcaacaactctactcattcaagatggtggagtcaaag 534520  T
Q  133 gccatcatggagca 146  Q
     || | ||||||||    
T  534521 accgtgatggagca 534534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 42427937 - 42427838
Alignment:
Q  33 gatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    ||||||| |||||||| | || ||||| ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  42427937 gatgtggtcaaagttgtagtcattgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagtcaaag 42427838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 33790828 - 33790722
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| | ||| || | |||||||||||||||||||||| |||||    
T  33790828 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatgg 33790729  T
Q  122 tggagtc 128  Q
    |||||||    
T  33790728 tggagtc 33790722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 37557198 - 37557304
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||||||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  37557198 accgcgacatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 37557297  T
Q  122 tggagtc 128  Q
    |||||||    
T  37557298 tggagtc 37557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 13694666 - 13694534
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| ||||||| || ||||||| |||| ||||| || ||||| ||||| || ||||||||||||  |||||||||| | ||||||||||||| |||    
T  13694666 aggaacctaccgcgatattgatgtggtcaaatttggagtcgttgtatatgaccaaatctttggctcatatgcaattcctatatcaacaactctacttatt 13694567  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
     | ||||||||||||||| | ||||||||||||    
T  13694566 taagatggtggagtcaaatgtcatcatggagca 13694534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 27449335 - 27449229
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| |||||||| ||||| |||||| ||||| || | |||||||||||||| ||||||| |||||    
T  27449335 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacaaaatctttagctcataggcaactcttgaagcaacaactctattcattcaagatgg 27449236  T
Q  122 tggagtc 128  Q
    |||||||    
T  27449235 tggagtc 27449229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 43598245 - 43598139
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || ||||| |||||| ||||| || | |||||||||||||| ||||||| |||||    
T  43598245 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttagctcatgggcaactcttgaagcaacaactctattcattcaagatgg 43598146  T
Q  122 tggagtc 128  Q
    |||||||    
T  43598145 tggagtc 43598139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 43603737 - 43603631
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || ||||| |||||| ||||| || | |||||||||||||| ||||||| |||||    
T  43603737 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttagctcatgggcaactcttgaagcaacaactctattcattcaagatgg 43603638  T
Q  122 tggagtc 128  Q
    |||||||    
T  43603637 tggagtc 43603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 43609229 - 43609123
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || ||||| |||||| ||||| || | |||||||||||||| ||||||| |||||    
T  43609229 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttagctcatgggcaactcttgaagcaacaactctattcattcaagatgg 43609130  T
Q  122 tggagtc 128  Q
    |||||||    
T  43609129 tggagtc 43609123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 13294851 - 13294914
Alignment:
Q  83 ggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13294851 ggcaattcagaaagcaacaactctactcattcatgatggtggagtcaaagggcatcatggagca 13294914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 31397566 - 31397672
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||| ||||||| ||||||||| || || || |||||||| |||||||||||| ||||| || | |||||||||||||| ||||| | |||||    
T  31397566 accgcggcatcaatgtgggaaaagttggagtcattctatatgacaaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatgg 31397665  T
Q  122 tggagtc 128  Q
    |||||||    
T  31397666 tggagtc 31397672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 34842124 - 34842005
Alignment:
Q  27 gacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggag 126  Q
    ||||||||||||||| ||||||||  | ||||| |||||||| ||||| |||| | | |||||  | ||  |||||||||||||||||| ||||||||||    
T  34842124 gacatcgatgtgggctaagttggagccattgtacatgacaaaatctttagctcgtagacaatttttgaaataacaactctactcattcaagatggtggag 34842025  T
Q  127 tcaaaggccatcatggagca 146  Q
    || ||  | |||||||||||    
T  34842024 tctaaacctatcatggagca 34842005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 1e-60; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 456592 - 456729
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  456592 agcaaaggaagcaaccgcgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 456691  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  456692 tcattcaagatggtagagtcaaaggccatcatggagca 456729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 10957896 - 10957759
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10957896 agcaaaggaaccaaccgtggcatcgatttgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 10957797  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10957796 tcattcaggatggtagagtcaaaggccatcatggagca 10957759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 43226762 - 43226899
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43226762 agcaaaggaacgaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 43226861  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  43226862 tcattcaagatggtggagtcaaagaccatcatggagca 43226899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 4310083 - 4309946
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||| |||| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4310083 agcaaaggaacgaaccgcggcatcaatatgggcaaagttgaaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 4309984  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4309983 tcattcaggatggtggagtcaaagaccatcatggagca 4309946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 5192335 - 5192472
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  5192335 agcaaaggaagcaactgcgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcagcaattcctaaagcaacgactctac 5192434  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5192435 tcattcaggatggtagagtcaaaggccatcattgagca 5192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 6065366 - 6065229
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  6065366 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatacgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 6065267  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| ||| || |||||||||||||||||||||||    
T  6065266 tcattcaagatcgtagagtcaaaggccatcatggagca 6065229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 11168786 - 11168923
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  11168786 agcagaggaagcaaccgcagcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaactactctac 11168885  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  11168886 tcattctggatggtagagtcaaaggccatcatggagca 11168923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 18098744 - 18098607
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18098744 agcaaaggaaccaaccgcggcatcaatgtgggcaaagatggaatctttgtatatgacaaagtctttggctcataggcaattcctaaagcaacaactctac 18098645  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    | |||||||||||| |||||||||||||||||||||||    
T  18098644 ttattcaggatggttgagtcaaaggccatcatggagca 18098607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 5898094 - 5898231
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  5898094 agcaaaggaacgaaccgcgacatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcttaaagcaacaactctac 5898193  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||| | |||||||||||| ||| |||||||||||||    
T  5898194 tcatttaagatggtggagtcgaagaccatcatggagca 5898231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 3315367 - 3315503
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||     
T  3315367 agcaaaggaaccaaccgcgacatcgatgtgtgcaaagttggaatatttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactttat 3315466  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| |||||| |||||||||||||||| |||||    
T  3315467 tcattcaagatggtagagtcaaaggccatcacggagc 3315503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 7769245 - 7769377
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7769245 aggaaccaattgcgacatcgatgtggtcaaagttggagtctttgtatatgacaaagtctttggctcatcggcaattcctaaagaaacaactctactcatt 7769344  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||||| |||||||||||    
T  7769345 caagatggtggagtcaaaggctatcatggagca 7769377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 23634150 - 23634267
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  23634150 catcgatgaggtcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaatttctaaagcaacaactctagtcattcaagatggtggagtc 23634249  T
Q  129 aaaggccatcatggagca 146  Q
    ||||||||||||||||||    
T  23634250 aaaggccatcatggagca 23634267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 23199663 - 23199531
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||||||||| |||||    
T  23199663 aggaaccaaccgcgacatcgatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctaatcatt 23199564  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| |||| ||||||||    
T  23199563 caagatggtggagtcaaagaccatgatggagca 23199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 42990984 - 42991120
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| |||    
T  42990984 agcaaaggaacgaaccgcgacatcgatgtgggcaaagttggaatctttatatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttac 42991083  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    |||||||  |||||  ||||||||||| || ||||||    
T  42991084 tcattcaatatggtaaagtcaaaggccttcttggagc 42991120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 28101574 - 28101445
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    ||||||||||||||||| |||||| ||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28101574 gaaccaaccgcgacatcaatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggtaattcctaaagtaacaactctactcattca 28101475  T
Q  116 ggatggtggagtcaaaggccatcatggagc 145  Q
     ||||||  ||| |||||||||||||||||    
T  28101474 agatggtaaagttaaaggccatcatggagc 28101445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 43423030 - 43422907
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||  ||||    
T  43423030 caaccgcgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaagtcccaaatcaacaactttactcatt--ggat 43422933  T
Q  120 ggtggagtcaaaggccatcatggagc 145  Q
     ||  |||||||||||||||||||||    
T  43422932 tgtaaagtcaaaggccatcatggagc 43422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 5259847 - 5259715
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| |||| |||||| |||||||||| || ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5259847 aggaaccaaccgcggcatctatgtggtcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 5259748  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  5259747 caagatggtggagtcaaagaccttgatggagca 5259715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 27421328 - 27421460
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||||||| ||||||| |||||||||| || ||||   ||||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  27421328 aggaaccaaccgcgacattgatgtggtcaaagttggagtcgttgttattgacaaaatctttggctcatcggcaattcctaaaacaacaactttactcatt 27421427  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||| |||||||||| ||||||||||||    
T  27421428 caagatggtagagtcaaaggtcatcatggagca 27421460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10209844 - 10209976
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10209844 aggaaccaaccgcggcatcgatatggtctaagttggaatcattgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10209943  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  10209944 caagatggtggagtcaaagaccgtgatggagca 10209976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 37407332 - 37407464
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| |||| |||||| |||||||||| || ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37407332 aggaaccaaccgcggcatcaatgtggtcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcatt 37407431  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||||| |||| || | ||||||||    
T  37407432 caagatggtggagttaaagaccgtgatggagca 37407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 53917242 - 53917111
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||| ||| ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  53917242 aggaaacaactgcggcatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcatt 53917143  T
Q  114 caggatggtggagtcaaaggccatcatggagc 145  Q
     | ||||||  |||||||| ||||||||||||    
T  53917142 taagatggtaaagtcaaagaccatcatggagc 53917111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 4600244 - 4600126
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  4600244 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 4600145  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  4600144 caagatggtggagtcaaag 4600126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 25634589 - 25634699
Alignment:
Q  36 gtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggcc 135  Q
    |||| ||||||| || ||||| || ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25634589 gtggtcaaagttagagtctttatatatgacaaagtctttgactcatcagcaattcctaaagccacaactctactcattcaagatggtggagtcaaaggcc 25634688  T
Q  136 atcatggagca 146  Q
    |||||||||||    
T  25634689 atcatggagca 25634699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10056888 - 10057020
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10056888 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10056987  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  10056988 caagatggtggagtcaaagaccgtgatggagca 10057020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10061332 - 10061464
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10061332 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10061431  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  10061432 caagatggtggagtcaaagaccgtgatggagca 10061464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10063554 - 10063686
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10063554 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10063653  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  10063654 caagatggtggagtcaaagaccgtgatggagca 10063686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10065776 - 10065908
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10065776 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10065875  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  10065876 caagatggtggagtcaaagaccgtgatggagca 10065908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 22834533 - 22834415
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| | ||||||||| |||||||||| || ||||| ||||  ||||||||||||||| |||||||||| |||||||||||||| |||||    
T  22834533 aggaaccaaccgcggcgtcgatgtggtcaaagttggagtcattgtatatgatcaagtctttggctcataggcaattccttaagcaacaactctattcatt 22834434  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||| ||||    
T  22834433 caagatggtggagttaaag 22834415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 10059110 - 10059242
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  10059110 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 10059209  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||| | |||| || | ||||||||    
T  10059210 caagatggtggatttaaagaccgtgatggagca 10059242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 1620027 - 1619936
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatg 120  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  1620027 catcgatgtggtcaaagttggagtctttgcatatgacaaagtctttggctcattggtaattcctaaagcaacaactctactcattcaagatg 1619936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 6717156 - 6717274
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | || ||||| |||| |||||||||||||||    
T  6717156 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacatttccttaagcgacaactctactcatt 6717255  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  6717256 caagatggtggagtcaaag 6717274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 9635648 - 9635516
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| |||| | |||| ||||||||||  | ||||| ||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  9635648 aggaaccaaccgcggcatctacgtggtcaaagttggagccgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaaatctactcatt 9635549  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||| | |||||| || | ||||||||    
T  9635548 caagatggtgcattcaaagaccgtgatggagca 9635516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 7762914 - 7763046
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||| |||||||  |||||||||| |||||||||| || || || ||||| |||||||||||||||  ||||||| | |||||||||||||| |||||    
T  7762914 aggaactaaccgcggaatcgatgtggtcaaagttggagtcattatatatgaccaagtctttggctcataagcaattctttaagcaacaactctattcatt 7763013  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
     | |||||||||||||||| || | ||||||||    
T  7763014 taagatggtggagtcaaagaccgtgatggagca 7763046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 29811532 - 29811644
Alignment:
Q  34 atgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagg 133  Q
    |||||| |||||||||| || ||||| || || | |||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||     
T  29811532 atgtggtcaaagttggagtcattgtatataaccaggtctttggctcataagcaattccttaagcaacaactctactcattcaagatggtggagtcaaaga 29811631  T
Q  134 ccatcatggagca 146  Q
    || | ||||||||    
T  29811632 ccgtgatggagca 29811644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 32891752 - 32891851
Alignment:
Q  33 gatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    ||||||| |||||||||| || ||||| ||||| || |||||||||||| |||||||||| |||||||||||||||||||| | | ||||||||||||||    
T  32891752 gatgtggtcaaagttggagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctactcatttaaggtggtggagtcaaag 32891851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 15830766 - 15830648
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| ||| ||||||||| |||| |||||||||| |  ||||| ||||| |||||| ||| |||| ||||||||||||||||| |||| ||||||||    
T  15830766 aggaacctaccacgacatcgaggtggtcaaagttggagttattgtatatgactaagtctatggttcataggcaattcctaaagcaagaactttactcatt 15830667  T
Q  114 caggatggtggagtcaaag 132  Q
     | ||||||||||||||||    
T  15830666 taagatggtggagtcaaag 15830648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 32479846 - 32479747
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    |||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||| | ||||||||||||    
T  32479846 catcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatggtggagtc 32479747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 53597916 - 53598011
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctact 109  Q
    ||||| |||||||| ||||||||||| |||| ||| | |||||||| ||||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  53597916 aggaatcaaccgcggcatcgatgtggtcaaaattgaagtctttgtatatgacaaagtctttacctcatcggcaatttctaaagcaagaactctact 53598011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 8516607 - 8516501
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||||||||| || || || || ||||| || |||||||||||| ||||| || | |||||||||||||| ||||| | |||||    
T  8516607 accgcggcatcgatgtgggcaaagttagagtcattatatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatgg 8516508  T
Q  122 tggagtc 128  Q
    |||||||    
T  8516507 tggagtc 8516501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 23409856 - 23409742
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||||| | ||||| ||| |||| || || || ||||| ||||| || |||||||||||| ||||| |||| |||||||||||||||| |||    
T  23409856 aggaacctaccgcggcgtcgatatggtcaaattttgagtcattgtatatgaccaaatctttggctcataggcaactccttaagcaacaactctacttatt 23409757  T
Q  114 caggatggtggagtc 128  Q
     | ||||||||||||    
T  23409756 taagatggtggagtc 23409742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 15822169 - 15822092
Alignment:
Q  55 ttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    ||||| ||||| |||||||| ||||||  | ||||||||||||||||||||||||| || |  |||||||||||||||    
T  15822169 ttgtatatgactaagtctttagctcatatgtaattcctaaagcaacaactctactcgtttaaaatggtggagtcaaag 15822092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 3324121 - 3324228
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgac-aaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatg 120  Q
    |||||| | ||||||||||| |||||||| || ||||| | ||| ||| || ||||||||| ||||| || | || ||||||||||| ||||||| ||||    
T  3324121 accgcggcgtcgatgtgggctaagttggagtcattgtacaagacgaaaatcgttggctcataggcaactcttgaaacaacaactctattcattcaagatg 3324220  T
Q  121 gtggagtc 128  Q
    ||||||||    
T  3324221 gtggagtc 3324228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 16263863 - 16263770
Alignment:
Q  34 atgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    |||||||| |||||||| || ||||| ||||| || ||||||| |||| ||||  || | || ||||||||||| ||||||| ||||||||||||    
T  16263863 atgtgggctaagttggagtcattgtacatgacgaaatctttgg-tcataggcagctcttgaaacaacaactctattcattcaagatggtggagtc 16263770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 30845049 - 30844936
Alignment:
Q  33 gatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaag 132  Q
    |||||||| || |||||| || ||||| || || ||||| ||||||||| | |||||| | |  ||| |||||||||||||||| |||||||| || ||     
T  30845049 gatgtgggaaaggttggagtcgttgtatataaccaagtcattggctcatagacaattcatcatacaaaaactctactcattcagaatggtggaatctaaa 30844950  T
Q  133 gccatcatggagca 146  Q
     ||||||| |||||    
T  30844949 accatcatagagca 30844936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 1e-60; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 28841128 - 28841265
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28841128 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 28841227  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28841228 tcattcaggatggtagagtcaaaggccatcatggagca 28841265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 51750743 - 51750880
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51750743 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 51750842  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  51750843 tcattcaggatggtagagtcaaaggccatcatggagca 51750880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16226879 - 16227011
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16226879 aggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctactcatt 16226978  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||  |||||||||||||||||||||||    
T  16226979 caggatggaagagtcaaaggccatcatggagca 16227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 51758240 - 51758375
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  51758240 agcaaaggaagcaaccgcgacatcgatgtgggcaaaattggaatctttgtatacgacaaagtctttggctcatcgacaattcctaaagcaacaactctac 51758339  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggag 144  Q
    |||||||||||||| |||||||||||||||||||||    
T  51758340 tcattcaggatggtagagtcaaaggccatcatggag 51758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 20300837 - 20300974
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20300837 agcaaaggaacaaaccgtggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcgtcaattcctaaagcaacaactctac 20300936  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20300937 tcattcaggatggtagagtcaaaggccatcatggagca 20300974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 28203272 - 28203135
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  28203272 agcaaaggaaccaaccgcggcatcgatgtgggcaaagttggaatctttgtataagacaaagtctttgactcatcgacaattcctaaagcaacaactctac 28203173  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  28203172 tcattcaagatggtggagtcaaaagccatcatggagca 28203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 27338691 - 27338569
Alignment:
Q  24 cgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtg 123  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27338691 cgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttgactcattggcaattcctaaagcaacaactctactcattcaggatggtg 27338592  T
Q  124 gagtcaaaggccatcatggagca 146  Q
    ||||||||| |||||||||||||    
T  27338591 gagtcaaagaccatcatggagca 27338569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 47178068 - 47178205
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  47178068 agcaaaggaagcaatcgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtcattggctcatcggcaattcctaaaacaacgactctac 47178167  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||  |||||||||||||||||||||||    
T  47178168 tcattcaggatggaagagtcaaaggccatcatggagca 47178205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 6996295 - 6996426
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||| ||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  6996295 aggatccaaccgcgacatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcatt 6996394  T
Q  114 caggatggtggagtcaaaggccatcatggagc 145  Q
     | ||||||  |||||||| ||||||||||||    
T  6996395 taagatggtaaagtcaaagaccatcatggagc 6996426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 8348630 - 8348501
Alignment:
Q  17 aaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcag 116  Q
    ||||||||| | | ||||||||| ||||||| || |||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||     
T  8348630 aaccaaccgtggcgtcgatgtggtcaaagttagagtctttgtatatgacaaagtctttgggacatcgacaattcctaaagcaacaactctactcattcaa 8348531  T
Q  117 gatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||||||||||||| ||||    
T  8348530 gatggtggagtcaaaggccatcatgtagca 8348501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 31737049 - 31736913
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||| || |||||||||||||||| |||    
T  31737049 agcaaaggaacgaaccgcggcatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggaaagtcctaaagcaacaactttac 31736950  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| ||||||  |||||||||| ||||||||||    
T  31736949 tcattcaagatggtaaagtcaaaggctatcatggagc 31736913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 25250854 - 25250719
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| ||||||||  ||||||||||  ||||||  ||| |||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  25250854 agcaaaggaaacaaccgcggtatcgatgtggttaaagttcaaatatttgtatatggcaaagtctttggctcttcggtaattcctaaagcaacaactctac 25250755  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggag 144  Q
    ||||||| |||||| |||||||||||||||||||||    
T  25250754 tcattcaagatggtagagtcaaaggccatcatggag 25250719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 3805706 - 3805574
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||||||||||||||| ||| ||| || |  ||||  ||||| || |||||||||||| |||||||||||||||||||||| || |||||    
T  3805706 aggaaccaaccgcgacatcgatgtggtcaacgttagagttgttgtttatgaccaaatctttggctcattggcaattcctaaagcaacaactgtaatcatt 3805607  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||  |||||||||||||||||||||||    
T  3805606 caagatggcagagtcaaaggccatcatggagca 3805574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 50078362 - 50078230
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||| ||| |||| |||||| ||||||| |||| |||||| |||||||| |||| ||||||||||||| |||||||||||||||| ||||||||    
T  50078362 aggaaacaactgcggcatcaatgtggtcaaagtttgaatatttgtatatgacaaaatcttgggctcatcggcaagtcctaaagcaacaactttactcatt 50078263  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||  | |||||||||||||||||||||||    
T  50078262 caagattatagagtcaaaggccatcatggagca 50078230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 28222946 - 28222828
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||  ||||||||||| |||||||||  || ||||| ||||| || |||||||||||| |||||||||| |||||||||||||| |||||    
T  28222946 aggaaccaaccgcagcatcgatgtggtcaaagttggtgtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctattcatt 28222847  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  28222846 caagatggtggagtcaaag 28222828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 16429699 - 16429791
Alignment:
Q  54 tttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  16429699 tttgtatatgacaaagtctttggctcatcagaaattcctaaagtaacaactttactcattcaagatggtagagtcaaaggccatcatggagca 16429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 50168874 - 50168743
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||| |||| ||||| ||| |||||||||| |||| ||| ||||| |||| |||||||||| |||||||||| |||||||||||||| |||||    
T  50168874 aggaaccaaccacgacgtcgatatggtcaaagttggagtctt-gtatatgaccaagtttttggctcataggcaattccttaagcaacaactctattcatt 50168776  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  50168775 caagatggtggagtcaaagaccgtgatggagca 50168743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 3157306 - 3157424
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||||| | ||||||||| |||||||||| || || || ||||| ||||||||||||||| | |||||||| |||||||||||||| |||||    
T  3157306 aggaacctaccgcggcgtcgatgtggtcaaagttggagtcattctatatgaccaagtctttggctcatagacaattccttaagcaacaactctattcatt 3157405  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  3157406 caagatggtggagtcaaag 3157424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 31657847 - 31657965
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| | ||||||||| |||||||||| || ||||| ||||| || ||||||||| || || ||||||| ||||||||||| ||||||||    
T  31657847 aggaaccaaccgcggcgtcgatgtggtcaaagttggagtcattgtatatgaccaaatctttggcttataggaaattccttaagcaacaactttactcatt 31657946  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  31657947 caagatggtggagtcaaag 31657965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 13127296 - 13127171
Alignment:
Q  21 aaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatg 120  Q
    |||||||||||||||||   |||||||||| |||||||| |||||||| |||||||||||||| |||||| ||||| ||||||| ||||||||||  |||    
T  13127296 aaccgcgacatcgatgtcttcaaagttggagtctttgtatatgacaaattctttggctcatcgacaattcttaaagaaacaactatactcattcaatatg 13127197  T
Q  121 gtggagtcaaaggccatcatggagca 146  Q
    | ||||||||||  ||||||| ||||    
T  13127196 gcggagtcaaagatcatcatgtagca 13127171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 28997817 - 28997696
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    ||||| ||||||| |||||| |||||||  ||| |||||| |||||||| |||||| ||||||||||| |||||||||||||||| |||||||||  |||    
T  28997817 caaccacgacatcaatgtggtcaaagttcaaatatttgtatatgacaaaatctttgactcatcggcaagtcctaaagcaacaactttactcattcgagat 28997718  T
Q  120 ggtggagtcaaaggccatcatg 141  Q
    |||  |||||||||| ||||||    
T  28997717 ggtaaagtcaaaggctatcatg 28997696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 29003533 - 29003412
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    ||||| ||||||| |||||| |||||||  ||| |||||| |||||||| |||||| ||||||||||| |||||||||||||||| |||||||||  |||    
T  29003533 caaccacgacatcaatgtggtcaaagttcaaatatttgtatatgacaaaatctttgactcatcggcaagtcctaaagcaacaactttactcattcgagat 29003434  T
Q  120 ggtggagtcaaaggccatcatg 141  Q
    |||  |||||||||| ||||||    
T  29003433 ggtaaagtcaaaggctatcatg 29003412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16456361 - 16456479
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| | | ||||||  |||||||||| || ||||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  16456361 aggaaccaactgcggcgttgatgtgatcaaagttggagtcattgtatatgaccaagactttggctcataggcaaatcctaaagcaacaactctactcatt 16456460  T
Q  114 caggatggtggagtcaaag 132  Q
    || |||| | |||||||||    
T  16456461 caagatgatagagtcaaag 16456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 41397752 - 41397646
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| ||||     
T  41397752 accgcggcatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatga 41397653  T
Q  122 tggagtc 128  Q
    |||||||    
T  41397652 tggagtc 41397646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 31424595 - 31424473
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||            ||||||||||||  ||||| |||||||||||  | |||    
T  31424595 agcaaaggaaccaaccacgacatagatgtgggcaaagttggaatctttgt------------ctttggctcatcaacaatttctaaagcaacatatttac 31424508  T
Q  109 tcattcaggatggtggagtcaaaggccatcatgga 143  Q
    ||||||| |||||| ||||||||||||||||||||    
T  31424507 tcattcaagatggtagagtcaaaggccatcatgga 31424473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 47099392 - 47099498
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || || || ||||| || || ||||||||| ||||| || | || ||||||||||| ||||||| |||||    
T  47099392 accgcggcatcgatgtgggctaagttggagtcattttacatgacgaaatcgttggctcataggcaactcgtgaaacaacaactctattcattcaagatgg 47099491  T
Q  122 tggagtc 128  Q
    |||||||    
T  47099492 tggagtc 47099498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 19359412 - 19359515
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||| | || ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| | |||    
T  19359412 accgcggcatcgatgtgggctaagttgaagtcattgtacatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaaggtgg 19359511  T
Q  122 tgga 125  Q
    ||||    
T  19359512 tgga 19359515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 17346095 - 17346212
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    |||| |||||||| || ||||| || ||||| ||||| || || |||| | || ||||| || | || ||||||||||||||||||| |||||| |||||    
T  17346095 catcaatgtgggctaaattggagtcattgtacatgacgaaatcgttggttgataggcaactcttgaaacaacaactctactcattcaagatggtagagtc 17346194  T
Q  129 aaaggccatcatggagca 146  Q
     ||  | |||||||||||    
T  17346195 taaatcaatcatggagca 17346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 33094383 - 33094279
Alignment:
Q  27 gacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggag 126  Q
    |||| |||||||| ||| |||||| ||||| || ||||| ||||  || | ||||  | ||||||| || ||| ||||||||||||| || |||||||||    
T  33094383 gacaacgatgtggtcaaggttggagtctttatatatgaccaagttgttaggtcatatgtaattcctcaaacaataactctactcatttagaatggtggag 33094284  T
Q  127 tcaaa 131  Q
    |||||    
T  33094283 tcaaa 33094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 114; Significance: 4e-58; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 22832 - 22969
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22832 agcaaaggaagcaaccgcggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 22931  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22932 tcattcaggatggtagagtcaaaggccatcatggagca 22969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 4e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 36165 - 36302
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| | |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  36165 agcaaaggaagctaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttagctcatcggcaattcctaaagcaacaactctac 36264  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36265 tcattcaggatggtggagtcaaaggccatcatggagca 36302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 7094034 - 7093897
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7094034 agcaaaggaagcaaccgcgacatcgatgtgggcaaagttggagtctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctac 7093935  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7093934 tcattcaggatggtagagtcaaaggccatcatggagca 7093897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 38394701 - 38394838
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38394701 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 38394800  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  38394801 tcattcaagatggtagagtcaaaggccatcatggagca 38394838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 1048862 - 1048725
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1048862 agcaaaggaagcaaccgcggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggcgcatcggcaattcctaaagcaacaactctac 1048763  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1048762 tcattcaggatggtagagtcaaaggccatcatggagca 1048725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 7351224 - 7351087
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7351224 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 7351125  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||| |||||||||| ||||||||||||    
T  7351124 tcattcaagatggtagagtcaaaggtcatcatggagca 7351087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 22135518 - 22135655
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135518 agcaaaggaagcaaccgcggcatcaatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 22135617  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22135618 tcattcaggatggtagagtcaaaggccatcatggagca 22135655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 40550545 - 40550682
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40550545 agcaaaggaagcaaccgcggcatcaatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 40550644  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  40550645 tcattcaggatggtagagtcaaaggccatcatggagca 40550682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 44725290 - 44725427
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  44725290 agcaaaggaaccaaccgcggcatcgatttgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagtaacaactctac 44725389  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    | |||||||||||||||||||||||||||||| |||||    
T  44725390 ttattcaggatggtggagtcaaaggccatcatagagca 44725427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 24749309 - 24749438
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    |||||||||  | |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  24749309 gaaccaaccatggcatcgatgtgggcaaagttgaaatctttgtatatgacaaagtctttggctgatcggcaattcctaaagcaataactctactcattca 24749408  T
Q  116 ggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||||||||||||||||||||||||||    
T  24749409 ggatggtggagtcaaaggccatcatggagc 24749438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 13290072 - 13289935
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||| ||||| ||||||| |||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13290072 agcaaaggaaccaaccgggacattgatgtggtcaaagttggagtcattgtatatgacaaagtctttggctcatcggtaattcctaaagcaacaactctac 13289973  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  13289972 tcattcaagatggtggagttaaaggccatcatggagca 13289935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 7471543 - 7471418
Alignment:
Q  20 caaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggat 119  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  7471543 caaccgcggcatcgatgtggtcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcattcaagat 7471444  T
Q  120 ggtggagtcaaaggccatcatggagc 145  Q
    |||  ||| |||||| ||||||||||    
T  7471443 ggtaaagtaaaaggctatcatggagc 7471418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 20298048 - 20298166
Alignment:
Q  27 gacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggag 126  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||  ||    
T  20298048 gacatcgatgtgggcaaagtcggaatctttgtatatgacaaagtctttggctcatcgacaagtcctaaagcaacaactttactcattcaagatggtaaag 20298147  T
Q  127 tcaaaggccatcatggagc 145  Q
    ||||||||| |||||||||    
T  20298148 tcaaaggccttcatggagc 20298166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 31159223 - 31159138
Alignment:
Q  61 atgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31159223 atgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtcaaaggccatcatggagca 31159138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 28486286 - 28486416
Alignment:
Q  15 ggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattc 114  Q
    |||| |||||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  28486286 ggaaacaaccgcggcatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcatcggaaagtcctaaagcaacaactttactcattc 28486385  T
Q  115 aggatggtggagtcaaaggccatcatggagc 145  Q
    | ||||||  |||||||||| ||||||||||    
T  28486386 aagatggtaaagtcaaaggctatcatggagc 28486416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 4295502 - 4295401
Alignment:
Q  21 aaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatg 120  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  4295502 aaccgcggcatcgatgtgggaaaagttggaatctttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcattcaagatg 4295403  T
Q  121 gt 122  Q
    ||    
T  4295402 gt 4295401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 21678781 - 21678910
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    |||||||||||||||||||||||| ||||||| |||||||||||  | ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21678781 gaaccaaccgcgacatcgatgtggtcaaagttcgaatctttgtattttacaaagtctttggctcatcggcagttcctaaagcaacaactttactcattca 21678880  T
Q  116 ggatggtggagtcaaaggccatcatggagc 145  Q
     ||||||  | | |||||| ||||||||||    
T  21678881 agatggtaaaataaaaggcaatcatggagc 21678910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 24816932 - 24816806
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||||||||||||||| || |||||||||||| ||||      |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  24816932 aggaaccaaccgcgacatcgatgcggtcaaagttggaatttttg------acaaagtctttggctcatctacaattcctaaagcaacaactctactcatt 24816839  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||| ||||||| ||||||||||||    
T  24816838 caagatggtggattcaaaggtcatcatggagca 24816806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 6594058 - 6593926
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  6594058 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 6593959  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  6593958 caagatggtggagtcaaagaccgtgatggagca 6593926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 18391696 - 18391564
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  18391696 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 18391597  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  18391596 caagatggtggagtcaaagaccgtgatggagca 18391564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 48490048 - 48490180
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| || ||| | ||||||||| |||||||||| || ||||| || ||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  48490048 aggaacctactgcggcgtcgatgtggtcaaagttggagtcattgtatattacaaaatctttggctcataggcaattccttaagcaacaactctactcatt 48490147  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  48490148 caagatggtggagtcaaagaccgtgatggagca 48490180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 47675662 - 47675544
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||| |||||| | ||||||||| ||||||| || || ||||| ||||| || |||||||||||| |||||||||| |||||||||||||| |||||    
T  47675662 aggaacctaccgcggcgtcgatgtggtcaaagtttgagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctaatcatt 47675563  T
Q  114 caggatggtggagtcaaag 132  Q
    || ||||||||||||||||    
T  47675562 caagatggtggagtcaaag 47675544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 6047204 - 6047330
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||| |||| |||| ||| |  |||| ||||| || ||||| ||||  || ||||||||||||  ||||||||||||||||||||||||||||||    
T  6047204 aggaaccaatcgcggcatcaatgcgatcaaatttggagtcgttgtatatgaacaaatctttggctcatacgcaattcctaaagcaacaactctactcatt 6047303  T
Q  114 caggatggtggagtcaaaggccatcat 140  Q
    || |||||||||||||||| |||||||    
T  6047304 caagatggtggagtcaaagtccatcat 6047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 12405850 - 12405744
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||||||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  12405850 accgcgacatcgatgtgggcgaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 12405751  T
Q  122 tggagtc 128  Q
    |||||||    
T  12405750 tggagtc 12405744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 24261897 - 24262003
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  24261897 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 24261996  T
Q  122 tggagtc 128  Q
    |||||||    
T  24261997 tggagtc 24262003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 26213460 - 26213569
Alignment:
Q  34 atgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagg 133  Q
    |||||| |||| ||||| || ||||| | ||| || ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26213460 atgtggtcaaatttggagtcattgtataggaccaaatctttggctcatttgcaattcctaaagcaacaactctactcattcaagatggtggagtcaaagg 26213559  T
Q  134 ccatcatggag 144  Q
    || ||||||||    
T  26213560 cc-tcatggag 26213569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 16884440 - 16884334
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||| | |||||    
T  16884440 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatgg 16884341  T
Q  122 tggagtc 128  Q
    |||||||    
T  16884340 tggagtc 16884334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 6570647 - 6570748
Alignment:
Q  31 tcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaa 130  Q
    ||||||||| |||||||| | || ||||| ||||| || |||||||||||| |||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  6570647 tcgatgtggtcaaagttgcagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctcctcattcaagattgtggagtcaa 6570746  T
Q  131 ag 132  Q
    ||    
T  6570747 ag 6570748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 5817759 - 5817865
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| |||||||| || ||| ||||| || || || | || ||||||||||||||||||| |||||    
T  5817759 accgcggcatcgatgtgggctaagttggagtcattgtatatgacaaaatcgttgactcataggaaactcttgaaacaacaactctactcattcaagatgg 5817858  T
Q  122 tggagtc 128  Q
    |||||||    
T  5817859 tggagtc 5817865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 18413171 - 18413065
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||| || |||||||| || ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| |||||    
T  18413171 accgcggcatcgatgtgagctaagttggagtcattgtacatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatgg 18413072  T
Q  122 tggagtc 128  Q
    |||||||    
T  18413071 tggagtc 18413065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 49091183 - 49091084
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||||| |||||||| || ||||| ||||| || || ||||||||| ||||| || | || |||||| |||| ||||||| ||||||||||||    
T  49091183 catcgatgtgggctaagttggagtcattgtacatgacgaaatcgttggctcataggcaactcttgaaacaacaattctattcattcaagatggtggagtc 49091084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 21645538 - 21645432
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||||||||||||||||| |||||||| |  ||||| ||||| || ||||| ||||||  |||| || | || |||||||| || ||||||| |||||    
T  21645538 accgcgacatcgatgtgggctaagttggagttattgtacatgacgaaatctttagctcataagcaactcttgaaacaacaactttattcattcaagatgg 21645439  T
Q  122 tggagtc 128  Q
    |||||||    
T  21645438 tggagtc 21645432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 21988420 - 21988327
Alignment:
Q  35 tgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||| |||||||| || ||||| ||||| || || |||| |||| ||||| || | || ||||||||||||||||||| ||||||||||||    
T  21988420 tgtgggctaagttggagtcattgtacatgacgaaatcgttggatcataggcaactcttgaaacaacaactctactcattcaagatggtggagtc 21988327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 3890938 - 3890827
Alignment:
Q  35 tgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggc 134  Q
    |||||||||||||| | |  ||||| ||||| ||| ||||| ||||| ||||||||||||| | | ||||||| ||||| |  |||| |||||||||||     
T  3890938 tgtgggcaaagttgaagttattgtatatgaccaagcctttgactcataggcaattcctaaaaccaaaactctattcattaaatatgggggagtcaaaggt 3890839  T
Q  135 catcatggagca 146  Q
    ||||||| ||||    
T  3890838 catcatgaagca 3890827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 3903978 - 3903899
Alignment:
Q  34 atgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||||||||| || ||||| ||||| ||||||||| ||| | | ||||||||||| ||| |  ||||||||||    
T  3903978 atgtgggcaaagttggagtcattgtatatgaccaagtctttgactcctagacaattcctaaaacaaaatttctactcatt 3903899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 9185738 - 9185837
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||||| |||||||| || |||||  |||  || |||||||||||| ||||  ||   || ||||||||||| ||||||| ||||||||||||    
T  9185738 catcgatgtgggctaagttggagtcattgtacgtgatgaaatctttggctcataggcagctctcgaaacaacaactctattcattcaagatggtggagtc 9185837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 4e-58; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 35217543 - 35217406
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35217543 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttatatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 35217444  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  35217443 tcattcaggatggtagagtcaaaggccatcatggagca 35217406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 36560714 - 36560577
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36560714 agcaaaggaagcaaccgcggcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 36560615  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  36560614 tcattcaggatggtagagtcaaaggccatcatggagca 36560577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 22405498 - 22405366
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| | ||||||||||    
T  22405498 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggcttatcagcaattcctaaagcaacgattctactcatt 22405399  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||||||||||||||||||||||||    
T  22405398 caagatggtggagtcaaaggccatcatggagca 22405366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 21520267 - 21520130
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21520267 agcaaaggaaccaaccgcagcatcgatgtggccaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 21520168  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||| ||||||||||||| ||| ||||||||||||||    
T  21520167 tcatttaggatggtggagttaaatgccatcatggagca 21520130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 19503909 - 19503772
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  |||||||    
T  19503909 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttgcctcatcggcaattcctaaagcaatgactctac 19503810  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||| | |||||||||||||||||||||||    
T  19503809 tcattcaggatgatagagtcaaaggccatcatggagca 19503772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 6263722 - 6263590
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||| |||||||| ||||||||||| |||||||   || |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  6263722 aggaaacaaccgcggcatcgatgtggtcaaagttcagatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcatt 6263623  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||| |||||||||||||||||||||||    
T  6263622 caagatggtagagtcaaaggccatcatggagca 6263590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 34574731 - 34574612
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||| ||||||||||| ||||||||| || |||||||||||||    
T  34574731 agcaaaggaaccaaccgcggcatcgatgtggtcaaagttggagtctttgtatatgacaaagcctttggctcataggcaattccaaatgcaacaactctac 34574632  T
Q  109 tcattcaggatggtggagtc 128  Q
    ||||| | |||| |||||||    
T  34574631 tcatttaagatgttggagtc 34574612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 19348790 - 19348684
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    ||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||| | ||| || | |||||||||||||||||||||| |||||    
T  19348790 accgcgacatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatgg 19348691  T
Q  122 tggagtc 128  Q
    |||||||    
T  19348690 tggagtc 19348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 25403163 - 25403057
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| |||||    
T  25403163 accgcggcatcgatgtgggctaagttggagtcattgtacatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatgg 25403064  T
Q  122 tggagtc 128  Q
    |||||||    
T  25403063 tggagtc 25403057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 28569993 - 28569864
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||||||  |||||| ||  |||||||||| || | ||| ||||| || ||||| |||||||| ||  ||||||| ||| |||| ||||||||    
T  28569993 aggaaccaaccgcggaatcgatatgatcaaagttggagtcgtggtatatgaccaaatctttagctcatcgacagatcctaaaacaaaaactttactcatt 28569894  T
Q  114 caggatggtggagtcaaaggccatcatgga 143  Q
    || |||||| ||||||||||||||||||||    
T  28569893 caagatggtagagtcaaaggccatcatgga 28569864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 23079048 - 23079147
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| ||||||||||||    
T  23079048 catcgatgtgggctaagttggagtcattgtacatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatggtggagtc 23079147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 10446014 - 10446120
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| | ||||||||||| |||||||| || ||||| ||||| || || ||||||||| || || || | || ||||||||||| ||||||| |||||    
T  10446014 accgcggcgtcgatgtgggctaagttggagtcattgtacatgacgaaatcgttggctcataggaaactcttgaaacaacaactctattcattcaagatgg 10446113  T
Q  122 tggagtc 128  Q
    |||||||    
T  10446114 tggagtc 10446120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 42019367 - 42019284
Alignment:
Q  61 atgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatggag 144  Q
    ||||| |||||||||||| || ||||||||||||| || ||||| ||  |||| | ||||||||||||||||| |||| |||||    
T  42019367 atgaccaagtctttggcttataggcaattcctaaaacaccaactttatacatttaagatggtggagtcaaaggtcatcgtggag 42019284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 110; Significance: 9e-56; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 34276 - 34393
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34276 catcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactccactcattcaggatggtggagtc 34375  T
Q  129 aaaggccatcatggagca 146  Q
    ||||||||||||||||||    
T  34376 aaaggccatcatggagca 34393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 9e-56; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 33309595 - 33309732
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33309595 agcaaaggaagcaaccgcagcatcgatatgggcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 33309694  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33309695 tcattcaggatggtagagtcaaaggccatcatggagca 33309732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 26067968 - 26067831
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  26067968 agcaaaggaagcaaccgcggcatcgatgtgggcaaagttggaatctttgtatatgacaaagtctttggctcatcagcaattcctaaagcaacgactctac 26067869  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||  ||||||||||||||||| |||||    
T  26067868 tcattcaggatggaagagtcaaaggccatcattgagca 26067831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 26932136 - 26931999
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  26932136 agcaaaggaagcaaccgcggcatcgttgtgggcaaagttgaaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctac 26932037  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    ||||||| |||||  |||||||||||||||||||||||    
T  26932036 tcattcaagatggaagagtcaaaggccatcatggagca 26931999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 3395107 - 3395238
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  3395107 aggaaccaaccgccgcatcgatgtgtgcaaagttggaatctttgtatatgacaaagtctttggctcattggcaattcctaaagcaacaactttactcatt 3395206  T
Q  114 caggatggtggagtcaaaggccatcatggagc 145  Q
    || |||||| |||||||||||||||| |||||    
T  3395207 caagatggtagagtcaaaggccatcacggagc 3395238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 8e-47
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 12936815 - 12936685
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| |    
T  12936815 gaaccaaccgcgccatcgatgtggtcaaagttggagtctttgtatatgacaaaatctttggctcattggcaattcctaaagcaacaactctactcattta 12936716  T
Q  116 ggatggtggagtcaaaggccatcatggagca 146  Q
     ||||||||||| ||||||||||||||||||    
T  12936715 agatggtggagttaaaggccatcatggagca 12936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 17012769 - 17012904
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||| ||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||||||||||| |||||||||||| |||    
T  17012769 agcaaaggaaccaactgcgacatcgatgtggtcaaagttcgaatatttgtatatgataaagtctttggctcatcggcaattccaaaagcaacaactttac 17012868  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggag 144  Q
    ||||||| |||||| |||||||||||||||||||||    
T  17012869 tcattcaagatggtagagtcaaaggccatcatggag 17012904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 5408594 - 5408462
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||| ||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5408594 aggaactaaccgcgacatcgatgtggtcaaagttggagtcgttgtatatgacaaagtctttggctcataggcaattccttaagcaacaactctactcatt 5408495  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  5408494 caagatggtggagtcaaagaccgtgatggagca 5408462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 5412919 - 5412787
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||| ||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5412919 aggaactaaccgcgacatcgatgtggtcaaagttggagtcgttgtatatgacaaagtctttggctcataggcaattccttaagcaacaactctactcatt 5412820  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  5412819 caagatggtggagtcaaagaccgtgatggagca 5412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 15534175 - 15534039
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  15534175 agcaaaggaaccaaccgcgacatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcattggcaagtcctaaagcaacaactttac 15534076  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| |||||| ||||||||  ||||||||||||    
T  15534075 tcattcaagatggtagagtcaaaaaccatcatggagc 15534039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 12157962 - 12158092
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||| |||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  12157962 aggaaccaaacgcgacatcgatgtggtcaaagttggagtcattgtatatgacaaagtctttggctcattggcaattcctaaagcaagcactctactcatt 12158061  T
Q  114 caggatggtggagtcaaaggccatcatggag 144  Q
    || |||||||||||||||| ||| |||||||    
T  12158062 caagatggtggagtcaaagaccaccatggag 12158092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 25463031 - 25462901
Alignment:
Q  16 gaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattca 115  Q
    ||||||| |||| ||||||||| |  ||||||  | |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25463031 gaaccaaacgcggcatcgatgtagttaaagttatagtctttgtatatgacaaagtcttaggctcatcggcaattcctaaagcaacaactctactcattca 25462932  T
Q  116 ggatggtggagtcaaaggccatcatggagca 146  Q
     ||||||||||||||||||||||||||||||    
T  25462931 agatggtggagtcaaaggccatcatggagca 25462901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 26944235 - 26944361
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||||||||||| |||||| || | |||    
T  26944235 aggaaccaaccgcgccatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggcttatcgacaattcctaaagcgacaactttaataatt 26944334  T
Q  114 caggatggtggagtcaaaggccatcat 140  Q
    || |||||| |||||||||||||||||    
T  26944335 caagatggtagagtcaaaggccatcat 26944361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 3631496 - 3631380
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||  ||||||||||||||| |||| |||||||||| ||||||  ||||    
T  3631496 catcgatgtggccaaagttggaagctttgtatatgacaaagtctttgactcatcaacaattcctaaagcaataactttactcattcaagatggtaaagtc 3631397  T
Q  129 aaaggccatcatggagc 145  Q
    |||||||||||||||||    
T  3631396 aaaggccatcatggagc 3631380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16553319 - 16553451
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  16553319 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcatt 16553418  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  16553419 caagatggtggagtcaaagaccgtgatggagca 16553451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16629875 - 16630007
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  16629875 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcatt 16629974  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  16629975 caagatggtggagtcaaagaccgtgatggagca 16630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 16651579 - 16651711
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||    
T  16651579 aggaaccaaccgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcatt 16651678  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  16651679 caagatggtggagtcaaagaccgtgatggagca 16651711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 34165527 - 34165659
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||| ||| ||||||| ||| | ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  34165527 aggaaccaactgcggcatcgatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcatt 34165626  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || |||||||||||||||| || | ||||||||    
T  34165627 caagatggtggagtcaaagaccgtgatggagca 34165659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 12911093 - 12911009
Alignment:
Q  62 tgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12911093 tgacaaagtctttggctcattgggaattcctaaagcaacaactctactcattcaagatggtggagttaaaggccatcatggagca 12911009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 30444004 - 30444136
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    ||||||||||| || ||||||||||| |||||||||| || ||||| ||||| ||||||||||||||| | ||||| ||||||| |||||||||||||||    
T  30444004 aggaaccaaccacggcatcgatgtggtcaaagttggagtcgttgtatatgaccaagtctttggctcatagacaatttctaaagccacaactctactcatt 30444103  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
     | |||| |||| | | |  |||||||||||||    
T  30444104 taagatgatggatttatacaccatcatggagca 30444136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 33331027 - 33331126
Alignment:
Q  29 catcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    |||||||||||||||||||||| || ||||| ||||  || |||||||||||| ||||| || | |||||||||||||| ||||||| ||||||||||||    
T  33331027 catcgatgtgggcaaagttggagtcattgtatatgatgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatggtggagtc 33331126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 14738146 - 14738252
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||| ||| |||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| ||||     
T  14738146 accgcggcatcgatgttggcgaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatga 14738245  T
Q  122 tggagtc 128  Q
    |||||||    
T  14738246 tggagtc 14738252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 18232369 - 18232267
Alignment:
Q  26 cgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtgga 125  Q
    |||||||||||||||| | |||||| || ||||| |||||||| || ||||||||| || || || | || ||||||||||| ||||||| |||| ||||    
T  18232369 cgacatcgatgtgggctacgttggagtcattgtacatgacaaaatcgttggctcataggaaactcttgaaacaacaactctattcattcaagatgatgga 18232270  T
Q  126 gtc 128  Q
    |||    
T  18232269 gtc 18232267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 9035810 - 9035704
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    ||||||||||||||||||||||||| | | || ||||| ||||  || |||||||| ||| || || |  | || ||||||||||||| ||||| |||||    
T  9035810 accgcgacatcgatgtgggcaaagtcgaagtcattgtacatgatgaaatctttggcccataggaaactgttgaaacaacaactctactgattcaagatgg 9035711  T
Q  122 tggagtc 128  Q
    |||||||    
T  9035710 tggagtc 9035704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 106; Significance: 2e-53; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 330 - 467
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  330 agcaaaggaagcaaccgtggcatcgatgtgggcaaagttggaatctttgtatatgacaaagcctttggctcatcggcaattcctaaagcaacgactctac 429  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  430 tcattcaggatggtagagtcaaaggccatcatggagca 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 102; Significance: 5e-51; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 73090 - 72953
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||| ||| ||| |||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  73090 agcaaaggaacgaactgcggcatctatgtgggcaaagttggaatctttgtatatgacaaaatctttgactcatcggcaattcctaaagcaacaactctac 72991  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagca 146  Q
    |||||||||||||||||||||||| |||||||||||||    
T  72990 tcattcaggatggtggagtcaaagaccatcatggagca 72953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 92; Significance: 5e-45; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 26463 - 26328
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| |||||||||| ||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||||||||||| |||||||||||| |||    
T  26463 agcaaaggaaccaactgcgacatcgatgtggtcaaagttcgaatatttgtatatgataaagtctttggctcatcggcaattccaaaagcaacaactttac 26364  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggag 144  Q
    ||||||| |||||| |||||||||||||||||||||    
T  26363 tcattcaagatggtagagtcaaaggccatcatggag 26328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 80572 - 80708
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||| ||| || |||||||||||||||| |||    
T  80572 agcaaaggaaacaaccgcgccatcgatgtggtcaaagttcgaatatttgtatatgacaaagtctttggctcaacggaaagtcctaaagcaacaactttac 80671  T
Q  109 tcattcaggatggtggagtcaaaggccatcatggagc 145  Q
    ||||||| ||||||  |||||||||| ||||||||||    
T  80672 tcattcaagatggtaaagtcaaaggctatcatggagc 80708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 50737 - 50860
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||| ||||| | |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  50737 accgcggcatcgatgtggtcaaagatcgaatatttgtatatgacaaagtctttggctcatcggcaagtcctaaagcaacaactttactcattcaagatgg 50836  T
Q  122 tggagtcaaaggccatcatggagc 145  Q
    |  |||||||||| ||||||||||    
T  50837 taaagtcaaaggctatcatggagc 50860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 70; Significance: 6e-32; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 1025 - 892
Alignment:
Q  9 agcataggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctac 108  Q
    |||| ||||| |||||||| ||||||||||| |||| || |||| |||||| |||||||||||||||||| ||||| || |||||||||||||||| |||    
T  1025 agcaaaggaaacaaccgcgtcatcgatgtggtcaaattttgaatttttgtatatgacaaagtctttggcttatcggaaagtcctaaagcaacaactttac 926  T
Q  109 tcattcaggatggtggagtcaaaggccatcatgg 142  Q
    ||||||| ||||||  |||||||||| |||||||    
T  925 tcattcaagatggtaaagtcaaaggctatcatgg 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 2e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 115246 - 115378
Alignment:
Q  14 aggaaccaaccgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatt 113  Q
    |||||||||||||| |||||| |||| |||||||| | || ||||| ||||| ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  115246 aggaaccaaccgcggcatcgacgtggtcaaagttgtagtcattgtatatgaccaagtctttggctcatagacaattccttaagcaacaactctactcatt 115345  T
Q  114 caggatggtggagtcaaaggccatcatggagca 146  Q
    || ||||||||| |||||| || | ||||||||    
T  115346 caagatggtggattcaaagaccgtgatggagca 115378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 14883 - 14989
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||||| |||||    
T  14883 accgcggcatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcattcaagatgg 14982  T
Q  122 tggagtc 128  Q
    |||||||    
T  14983 tggagtc 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 454 - 557
Alignment:
Q  25 gcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtgg 124  Q
    |||||||||||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | ||||||||||| || ||||||| ||||||||    
T  454 gcgacatcgatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactttattcattcaagatggtgg 553  T
Q  125 agtc 128  Q
    ||||    
T  554 agtc 557  T

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Target: scaffold0028 (Bit Score: 51; Significance: 1e-20; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 149529 - 149635
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| |||| ||||||||||||||||| || ||||| ||||| || |||||||||||| ||||| || | |||||||||||||| ||||| | |||||    
T  149529 accgcggcatcaatgtgggcaaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatgg 149628  T
Q  122 tggagtc 128  Q
    |||||||    
T  149629 tggagtc 149635  T

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Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 26920 - 26822
Alignment:
Q  35 tgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagg 133  Q
    ||||| |||||||||| || |||||  ||||||| ||||||||||||   ||||||||||| | ||| |||||||| || | |||||||||||||||||    
T  26920 tgtggtcaaagttggagtcgttgtatgtgacaaattctttggctcatacacaattcctaaaactacatctctactcgtttaagatggtggagtcaaagg 26822  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 2011 - 1914
Alignment:
Q  31 tcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||||| |||||||| || ||||| ||||| || || ||||||||| ||||| || | || ||||||||||| |||||||  |||||||||||    
T  2011 tcgatgtgggctaagttggagtcattgtacatgacgaaatcgttggctcataggcaactcttgaaacaacaactctattcattcaaaatggtggagtc 1914  T

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Target: scaffold0188 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 18518 - 18624
Alignment:
Q  22 accgcgacatcgatgtgggcaaagttggaatctttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatgg 121  Q
    |||||| ||||||||||||| |||||||| || ||||| ||||| || |||||||||||| ||||| |  | || |||||||||||  ||| || |||||    
T  18518 accgcggcatcgatgtgggctaagttggagtcattgtacatgacgaaatctttggctcataggcaacttttgaaacaacaactctatgcatccaagatgg 18617  T
Q  122 tggagtc 128  Q
     ||||||    
T  18618 cggagtc 18624  T

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Target: scaffold1991 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1991
Description:

Target: scaffold1991; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 1028 - 1101
Alignment:
Q  55 ttgtagatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||| ||||| || |||||||||||| ||||| || | || ||||||||||| ||||||| ||||||||||||    
T  1028 ttgtatatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatggtggagtc 1101  T

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Target: scaffold0184 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 30108 - 30163
Alignment:
Q  73 ttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||| ||||| || | || |||||||||||||| |||| ||||||||||||    
T  30108 ttggctcattggcaactcttgaaacaacaactctactctttcaagatggtggagtc 30163  T

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Target: scaffold0078 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 42736 - 42681
Alignment:
Q  73 ttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 128  Q
    ||||||||| ||||| || | || |||||||||||||| |||| ||||||||||||    
T  42736 ttggctcattggcaactcttgaaacaacaactctactctttcaagatggtggagtc 42681  T

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