View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: Solexa-NF5826-8 (Length: 87)
Name: Solexa-NF5826-8
Description: NF5826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5826-8 |
 |  |
|
| [»] chr5 (8 HSPs) |
 |  |
|
| [»] scaffold0283 (1 HSPs) |
 |  |  |
|
| [»] scaffold0092 (1 HSPs) |
 |  |  |
|
| [»] scaffold0065 (1 HSPs) |
 |  |  |
|
| [»] scaffold0019 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 50; Significance: 3e-20; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 30966714 - 30966634
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgctaaggaacttaaa |
87 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| | ||||||||||| ||||||||||| |
|
|
| T |
30966714 |
cagttaactgtcgaggaaaatagaaccggctgcagctaacta-cgaggaaaacttcggcagttaactgccgaggaacttaaa |
30966634 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 38971594 - 38971663
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaa-ccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||| ||||||||||| ||| ||||| |||||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
38971594 |
cagttaactatcgaggaaaattgaaaccggcggcagttaactgtcgaggaaaacttcggcagttaactgc |
38971663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 30192515 - 30192562
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
30192515 |
agaaccggctgcagttaactgtcgaggaaaacttcggcagttaactgc |
30192562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 35671105 - 35671152
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
35671105 |
agaaccggctgcagttaactgccgaggaaaactttggcagttaactgc |
35671152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 27532690 - 27532620
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||| ||||||||| || ||| | |||||||||||||||||| ||||| | | ||||||||||| |
|
|
| T |
27532690 |
acagttaactgccgaggaaaaataaaactgactgcagttaactatcgaggaaaacctcggcagttaactgc |
27532620 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 30966093 - 30966146
Alignment:
| Q |
7 |
agttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| |||||||| |||| ||||||| |
|
|
| T |
30966093 |
agttaactgccgaggaaaatataaccggctgtagttaactcccgaggaaaactt |
30966146 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 20421920 - 20421984
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||| ||||||||| ||||| || ||||||||||| |||| ||||||| | ||||||||| |
|
|
| T |
20421920 |
cagttaactgccgaggaaaa--gaaccagcggcagttaactaccgaggaaaacttcggcagttaact |
20421984 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 42099154 - 42099087
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||| |||| || ||| ||||| |||||||||||||| ||||| | | ||||||||| |
|
|
| T |
42099154 |
cagttaactgtcgagaaaaaataaaactggctgtagttaactatcgaggaaaacctcggcagttaact |
42099087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 1e-16; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 33052538 - 33052605
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
33052538 |
cagttaactgtcgaggaaaataaaaccgtctgcagttaactaccgagaaaaatctcgacagttaactg |
33052605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 26184678 - 26184613
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaa |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||| ||| ||||| | ||||||||| |
|
|
| T |
26184678 |
cagttaactgtcgaggaaaaataaaaccggctgcagttaactaccgatgaaaacatcgacagttaa |
26184613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 31496236 - 31496302
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| ||| |||| ||||| | | ||||||||| |
|
|
| T |
31496236 |
agttaactgtcgaggaaaaataaaaccggctgcagttatctaccgaggaaaacctcggcagttaact |
31496302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 31501622 - 31501688
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| ||| |||| ||||| | | ||||||||| |
|
|
| T |
31501622 |
agttaactgtcgaggaaaattaaaaccggctgcagttatctaccgaggaaaacctcggcagttaact |
31501688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 17596942 - 17596983
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaact |
46 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
17596942 |
cagttaactgtcgaggaaaaataaaaccggctgcagttaact |
17596983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 9049132 - 9049077
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgctaaggaactt |
84 |
Q |
| |
|
||||||||||||||||||| |||| ||||||| | |||||||||| |||||||| |
|
|
| T |
9049132 |
aaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaactt |
9049077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 51325982 - 51326048
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||| | |||||||| | ||||||||||| |
|
|
| T |
51325982 |
agttaactgtcgaggaaaaataaaaccggctgcagttaactaccaagaaaaacctcgacagttaact |
51326048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 19341068 - 19341114
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
19341068 |
gaaccggctgcagttaactaccgaggaaaacttcgacagttaactgc |
19341114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 55176418 - 55176351
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||||||| | || ||||||| ||||||||||||||||| ||||||| | ||||||||||| |
|
|
| T |
55176418 |
acagttaactgtcga--attatggaaccggatgcagttaactatcgaggaaaacttcggcagttaactgc |
55176351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 6144347 - 6144303
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| | ||||||||| |
|
|
| T |
6144347 |
gaaccggctgcagttaactaccgaggaaaacttcggcagttaact |
6144303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 6525358 - 6525322
Alignment:
| Q |
37 |
gcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
6525358 |
gcagctaactatcgagaaaaactttggcagttaactg |
6525322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21343543 - 21343499
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| | ||||||||| |
|
|
| T |
21343543 |
gaaccggctgcagttaactaccgaggaaaacttcggcagttaact |
21343499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 31890312 - 31890232
Alignment:
| Q |
7 |
agttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgctaaggaacttaaa |
87 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||||||||| || ||| ||||||| | ||||||||||| | ||||||||| |
|
|
| T |
31890312 |
agttaactgccgatgaaaaaagaaccggctgcagttagttacagaggaaaacttcggcagttaactgccgatgaacttaaa |
31890232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42148316 - 42148348
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
42148316 |
gaaccggctgcagttaactatcgaggaaaactt |
42148348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 52514312 - 52514344
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
52514312 |
gaaccggctgcagttaactatcgaggaaaactt |
52514344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 6143694 - 6143741
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
6143694 |
agaaccggctgcagttaactgccgaggaaaacttcggcagttaactgc |
6143741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 10658846 - 10658893
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||| ||||| |||| ||||||||| ||||||||||| |
|
|
| T |
10658846 |
agaaccggctgcagctaactgccgaggaaaactttggcagttaactgc |
10658893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 19341640 - 19341597
Alignment:
| Q |
31 |
ccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
19341640 |
ccggctgcagttaactaccgaggaaaacttcggcagttaactgc |
19341597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 32593162 - 32593115
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| || |||||||||| |
|
|
| T |
32593162 |
agaaccggctgcagttaacttccgaggaaaacttcgatagttaactgc |
32593115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.000000000007; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 40055377 - 40055444
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaac |
71 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||| |
|
|
| T |
40055377 |
acagttaactatcgaggaaaactaaaaccggctgcagttaactaccgaggaaaaccttggcagttaac |
40055444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 29407937 - 29407890
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
29407937 |
agaaccggctgcagttaactaacgaggaaaacttcggcagttaactgc |
29407890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 31567942 - 31567995
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaac |
58 |
Q |
| |
|
||||||||||||||| |||| || | ||| |||||||||||||||||||||||| |
|
|
| T |
31567942 |
cagttaactgtcgagaaaaaataaatccgactgcagttaactatcgagaaaaac |
31567995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 40156424 - 40156469
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
40156424 |
aaccggctgcagttaactgacgaggaaaacttcgacagttaactgc |
40156469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 2528693 - 2528724
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaact |
59 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
2528693 |
gaaccggctgcagttaactatcgaggaaaact |
2528724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 19848191 - 19848140
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaa |
57 |
Q |
| |
|
||||||||| ||||||||| || |||||| |||||||||||| ||||||||| |
|
|
| T |
19848191 |
agttaactgccgaggaaaaataaaaccggttgcagttaactaccgagaaaaa |
19848140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 33222639 - 33222686
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
33222639 |
agaaccggctgcagttaactgccgaggaaaacttcggcagttaactgc |
33222686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.00000000003; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 38857127 - 38857173
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| | ||||||||||| |
|
|
| T |
38857127 |
gaaccggctgcatttaactatcgagaaaaacttcggcagttaactgc |
38857173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 29097221 - 29097266
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| |||| ||||||| |
|
|
| T |
29097221 |
gaaccggctgcagttaactaccgaggaaaacttcgacaattaactg |
29097266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 29112398 - 29112450
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgctaaggaa |
81 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| | |||||||||||| ||||| |
|
|
| T |
29112398 |
aaccggctgcagttaactgccgaggaaaacttcggcagttaactgctgaggaa |
29112450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 26833526 - 26833479
Alignment:
| Q |
25 |
atagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| |||| |||| |
|
|
| T |
26833526 |
atagaaccggctgcagttaactaccgaagaaaactttggcagtaaact |
26833479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.00000000003; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 11565889 - 11565935
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
11565889 |
agaaccggctgcagttaactgtcgaggaaaacttcgacagttaactg |
11565935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 40334471 - 40334525
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaac |
58 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||| ||| |||||| |
|
|
| T |
40334471 |
acagttaactgtcgaggaaaaataaaaccggctgcagttaactaccgaaaaaaac |
40334525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 21538561 - 21538506
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
|||||||||| |||||||||||| ||||| ||||||||||||| ||| ||||||| |
|
|
| T |
21538561 |
acagttaactatcgaggaaaatataaccgactgcagttaactactgaggaaaactt |
21538506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 32538374 - 32538328
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| | |||| |||||| |
|
|
| T |
32538374 |
gaaccggctgcagttaactatcgaaaaaaacttcggcagtaaactgc |
32538328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18884552 - 18884507
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||| |||||||||||| | ||||||||||| |
|
|
| T |
18884552 |
aaccggctgcagttaactgccgagaaaaacttcggcagttaactgc |
18884507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 26791674 - 26791719
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||||||||||| |||||||||| | | ||||||||||| |
|
|
| T |
26791674 |
aaccggctgcagttaactaccgagaaaaacctcggcagttaactgc |
26791719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 17139626 - 17139677
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaa |
57 |
Q |
| |
|
||||||||||||||| || | | |||||||||||||||||| ||||||||| |
|
|
| T |
17139626 |
cagttaactgtcgagaaataaaaaaccggctgcagttaactgccgagaaaaa |
17139677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 53536013 - 53536044
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaact |
59 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
53536013 |
gaaccggctgcagttaactatcgaggaaaact |
53536044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.00000000003; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 7820151 - 7820197
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
7820151 |
gaaccggctgcagttaactatcgaaaaaaacttcggcagttaactgc |
7820197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 1167563 - 1167630
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||| ||||||||| || ||||| |||||||||||||||||| ||||| | | ||||||||| |
|
|
| T |
1167563 |
cagttaactgccgaggaaaagtaaaaccgactgcagttaactatcgaggaaaacctcggcagttaact |
1167630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 11828269 - 11828203
Alignment:
| Q |
7 |
agttaactgtcgaggaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||| |||| |||||||||||| || ||||||||| |||||||||||| | ||||||||||| |
|
|
| T |
11828269 |
agttaactgccgagaaaaatagaaccga-tgtagttaactaccgagaaaaacttcggcagttaactgc |
11828203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 13147514 - 13147565
Alignment:
| Q |
22 |
aaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| ||||| | |||||||||||| |
|
|
| T |
13147514 |
aaaatagaaccgactgcagttaactaccgaggaaaacctcgacagttaactg |
13147565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 13761094 - 13761047
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
13761094 |
agaaccggctgcagttaactgccgaggaaaacttcgacagttaactgc |
13761047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 28456773 - 28456738
Alignment:
| Q |
25 |
atagaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28456773 |
atagaaccggctgcagttaactatcgaggaaaactt |
28456738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 26770601 - 26770556
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||||||||||| |||| |||| |||| ||||||||||| |
|
|
| T |
26770601 |
aaccggctgcagttaactaccgaggaaaattttggcagttaactgc |
26770556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41459284 - 41459215
Alignment:
| Q |
5 |
acagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaactg |
73 |
Q |
| |
|
||||||||||| ||||||||| || |||| |||||||||||||| |||| ||||| | | |||||||||| |
|
|
| T |
41459284 |
acagttaactgccgaggaaaaataaaaccagctgcagttaactaccgaggaaaacctcggcagttaactg |
41459215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 5845559 - 5845507
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaac |
58 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||||||||| |||| ||||| |
|
|
| T |
5845559 |
agttaactgccgaggaaaaataaaaccggctgcagttaactaccgaggaaaac |
5845507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 23442295 - 23442327
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
23442295 |
gaaccggctgcagttaactatcgaggaaaactt |
23442327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27649277 - 27649321
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| |||||| |||| |
|
|
| T |
27649277 |
gaaccggctgcagttaactaccgaggaaaacttcgacagtaaact |
27649321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 28456474 - 28456506
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
28456474 |
gaaccggctgcagttaactatcgaggaaaactt |
28456506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 45203364 - 45203404
Alignment:
| Q |
7 |
agttaactgtcgaggaaaa-tagaaccggctgcagttaact |
46 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
45203364 |
agttaagtgtcgaggaaaaatagaaccggctgcagttaact |
45203404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 23603511 - 23603570
Alignment:
| Q |
22 |
aaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgctaaggaa |
81 |
Q |
| |
|
|||||| ||| | |||||||||||||||||| ||||| ||| ||||||||| || ||||| |
|
|
| T |
23603511 |
aaaataaaacagactgcagttaactatcgaggaaaaccttggcagttaactactgaggaa |
23603570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 47585598 - 47585665
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaa-tagaaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||||||| |||| ||||| | | ||||||||| |
|
|
| T |
47585598 |
cagttgactgtcgaggaaaaataaaatcggctgcagttaactaccgaggaaaacctcggcagttaact |
47585665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 49875028 - 49875059
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaact |
59 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
49875028 |
gaaccggctgcagttaactatcgaggaaaact |
49875059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000001; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 4174100 - 4174153
Alignment:
| Q |
21 |
gaaaatagaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||| ||||||||||||||||| || ||| |||||||| ||||||||||||| |
|
|
| T |
4174100 |
gaaaatcgaaccggctgcagttaattaccgaaaaaaacttcgacagttaactgc |
4174153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 42732829 - 42732795
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactttg |
62 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
42732829 |
gaaccggctgcagttaactatcgaggaaaactttg |
42732795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 36313966 - 36314003
Alignment:
| Q |
37 |
gcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
36313966 |
gcagttaactaccgagaaaaactttggcagttaactgc |
36314003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 43519926 - 43519958
Alignment:
| Q |
28 |
gaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
43519926 |
gaaccggctgcagttaactatcgaggaaaactt |
43519958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 44886845 - 44886817
Alignment:
| Q |
32 |
cggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
44886845 |
cggctgcagttaactatcgagaaaaactt |
44886817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 7120925 - 7120968
Alignment:
| Q |
29 |
aaccggctgcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
||||||||||||||| || |||||||||||||| ||||||||| |
|
|
| T |
7120925 |
aaccggctgcagttagctgccgagaaaaactttggcagttaact |
7120968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 23512816 - 23512781
Alignment:
| Q |
25 |
atagaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
23512816 |
atagaaccggctgtagttaactaccgagaaaaactt |
23512781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 33483547 - 33483512
Alignment:
| Q |
22 |
aaaatagaaccggctgcagttaactatcgagaaaaa |
57 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| |
|
|
| T |
33483547 |
aaaataaaaccggctgcagttaactatcgaggaaaa |
33483512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 39582524 - 39582559
Alignment:
| Q |
37 |
gcagttaactatcgagaaaaactttgacagttaact |
72 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39582524 |
gcagttaactatcgagaaaaacttcggcagttaact |
39582559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 40740929 - 40740976
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
40740929 |
agaaccggctgcagttaactgccgaggaaaacttcggcagttaactgc |
40740976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 45133345 - 45133290
Alignment:
| Q |
6 |
cagttaactgtcgaggaaaatagaac-cggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||| |||| ||||||| |
|
|
| T |
45133345 |
cagttaactgtcgaggaaaaatgaaatcggctgcagttaactaccgaggaaaactt |
45133290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0283 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0283
Description:
Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 556 - 584
Alignment:
| Q |
32 |
cggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
556 |
cggctgcagttaactatcgagaaaaactt |
584 |
T |
 |
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Target: scaffold0092 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 54588 - 54635
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||||||||||||||||||| |||| ||||| | ||||||||||||| |
|
|
| T |
54588 |
agaaccggctgcagttaactgccgaggaaaacatcgacagttaactgc |
54635 |
T |
 |
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Target: scaffold0065 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 65341 - 65388
Alignment:
| Q |
27 |
agaaccggctgcagttaactatcgagaaaaactttgacagttaactgc |
74 |
Q |
| |
|
|||| ||||||||||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
65341 |
agaatcggctgcagttaactgtcgaggaaaacttcggcagttaactgc |
65388 |
T |
 |
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Target: scaffold0019 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 134366 - 134331
Alignment:
| Q |
25 |
atagaaccggctgcagttaactatcgagaaaaactt |
60 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
134366 |
atagaaccggctgcagttaactaccgaggaaaactt |
134331 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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