View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5829-14 (Length: 141)
Name: Solexa-NF5829-14
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5829-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 4e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 21641108 - 21640969
Alignment:
| Q |
2 |
atgaaagtgatcatacgtacattaatgaatataggtttgttataagataaattataagagagaaaacaatcaatcaaagcctttgcttcttcagcaaaac |
101 |
Q |
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| T |
21641108 |
atgaaagtgatcatacgtacattaatgagtataggtttgttaaaagataaattataagagagaaaacaatcaatcaaagcctttgcttcttcagcaaaac |
21641009 |
T |
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| Q |
102 |
aaggttacacgagatacctaaaactatagtcacatatatt |
141 |
Q |
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| T |
21641008 |
aaggttacacgagatacctaaaactataggcgcatatatt |
21640969 |
T |
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