View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5829-15 (Length: 140)
Name: Solexa-NF5829-15
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5829-15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 132; Significance: 6e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7173765 - 7173904
Alignment:
| Q |
1 |
ttggagttattcatgataaaggaatcaaagctactcttttagggttcttcatgaacttcatcaagtaatctaaatcatcacatgcattatatagtttata |
100 |
Q |
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| T |
7173765 |
ttggagttattcatgataaaggaatcaaagctactcttttagggttcttcatgaacttcatcaagtaatcaaaatcatcacatgcattatatagttcata |
7173864 |
T |
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| Q |
101 |
cttttcaaataattagctgtgttgattagtgattagtctt |
140 |
Q |
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| T |
7173865 |
cttttcaaataattagctgtgttgattagtgattagtctt |
7173904 |
T |
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