View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5829-16 (Length: 138)
Name: Solexa-NF5829-16
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5829-16 |
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Alignment Details
Target: chr7 (Bit Score: 124; Significance: 4e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 7173427 - 7173562
Alignment:
| Q |
1 |
cagagatcacacgtgacaacgacacactatgcagccactaaaagtcaaaacaacttacacgctacgttacaaaatgaaacgtgattatcataataataat |
100 |
Q |
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| T |
7173427 |
cagaaatcacacgtgacaacgacacactacgcagccactaaaagtcaaaacaacttacacgctacgttacaaaacgaaacgtgattatcataataataat |
7173526 |
T |
|
| Q |
101 |
ccattaaacaactcttcctataaataatcacttatt |
136 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
7173527 |
ccattaaacaactcttcctataaataatcacttatt |
7173562 |
T |
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