View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5829-3 (Length: 233)

Name: Solexa-NF5829-3
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5829-3
Solexa-NF5829-3
[»] chr1 (62 HSPs)
chr1 (8-104)||(46894561-46894657)
chr1 (154-233)||(34712370-34712449)
chr1 (162-233)||(5376495-5376566)
chr1 (163-225)||(6427351-6427413)
chr1 (167-233)||(13436451-13436517)
chr1 (167-228)||(39953146-39953207)
chr1 (167-228)||(41877470-41877531)
chr1 (161-233)||(17754304-17754376)
chr1 (157-233)||(20157340-20157416)
chr1 (161-233)||(38503313-38503385)
chr1 (156-226)||(1486698-1486768)
chr1 (169-219)||(12713329-12713379)
chr1 (169-219)||(12717420-12717470)
chr1 (161-223)||(21038086-21038148)
chr1 (168-233)||(27471567-27471632)
chr1 (168-233)||(36878454-36878519)
chr1 (160-229)||(44296488-44296556)
chr1 (161-222)||(44482234-44482295)
chr1 (161-233)||(40285648-40285720)
chr1 (161-228)||(25361884-25361951)
chr1 (164-231)||(34371709-34371775)
chr1 (167-218)||(39130767-39130818)
chr1 (169-231)||(1864882-1864944)
chr1 (168-230)||(2784552-2784614)
chr1 (163-233)||(9828037-9828107)
chr1 (167-225)||(14332642-14332700)
chr1 (160-233)||(19562613-19562687)
chr1 (163-233)||(36905990-36906060)
chr1 (175-228)||(25098563-25098616)
chr1 (180-233)||(34298429-34298482)
chr1 (163-219)||(7918207-7918263)
chr1 (169-233)||(13997876-13997940)
chr1 (179-227)||(34257922-34257970)
chr1 (167-219)||(35999322-35999374)
chr1 (167-231)||(40181866-40181930)
chr1 (162-233)||(113292-113363)
chr1 (162-233)||(9629895-9629966)
chr1 (170-233)||(42325553-42325616)
chr1 (175-233)||(398773-398831)
chr1 (167-233)||(7353493-7353559)
chr1 (167-225)||(9709821-9709879)
chr1 (175-233)||(10233246-10233304)
chr1 (169-219)||(12707875-12707925)
chr1 (175-233)||(17831539-17831597)
chr1 (167-233)||(19637761-19637827)
chr1 (164-214)||(25272494-25272544)
chr1 (175-229)||(26238121-26238174)
chr1 (167-233)||(29163381-29163447)
chr1 (182-220)||(37055871-37055909)
chr1 (168-218)||(41017405-41017455)
chr1 (167-233)||(52903242-52903308)
chr1 (168-233)||(2896122-2896187)
chr1 (176-233)||(12443469-12443526)
chr1 (163-228)||(12993192-12993257)
chr1 (175-228)||(23714712-23714765)
chr1 (167-231)||(29229456-29229521)
chr1 (175-228)||(32724106-32724159)
chr1 (161-218)||(47989505-47989562)
chr1 (168-228)||(5898267-5898327)
chr1 (162-218)||(6612166-6612222)
chr1 (169-233)||(21378571-21378635)
chr1 (169-229)||(23738675-23738735)
[»] chr7 (54 HSPs)
chr7 (111-233)||(33384526-33384648)
chr7 (161-231)||(8160411-8160481)
chr7 (163-227)||(5235985-5236049)
chr7 (169-229)||(27093415-27093475)
chr7 (169-229)||(27184826-27184886)
chr7 (158-233)||(1433447-1433522)
chr7 (162-220)||(7328686-7328744)
chr7 (167-233)||(20549784-20549850)
chr7 (168-233)||(22484018-22484083)
chr7 (157-233)||(5233622-5233698)
chr7 (161-233)||(32308113-32308185)
chr7 (157-228)||(5548674-5548745)
chr7 (157-228)||(13770689-13770760)
chr7 (157-231)||(16341491-16341565)
chr7 (161-215)||(17307904-17307958)
chr7 (163-233)||(27945034-27945104)
chr7 (157-226)||(7758322-7758391)
chr7 (164-233)||(49107814-49107882)
chr7 (163-219)||(18013070-18013126)
chr7 (170-233)||(2948676-2948739)
chr7 (161-228)||(15902820-15902887)
chr7 (162-233)||(22602705-22602776)
chr7 (175-218)||(27732247-27732290)
chr7 (167-233)||(9482927-9482993)
chr7 (175-233)||(17851424-17851482)
chr7 (167-233)||(28155563-28155629)
chr7 (167-220)||(3721099-3721152)
chr7 (168-233)||(19206043-19206108)
chr7 (169-233)||(29787373-29787435)
chr7 (168-228)||(5835245-5835305)
chr7 (175-231)||(12278830-12278886)
chr7 (158-225)||(21138987-21139051)
chr7 (161-233)||(24339635-24339707)
chr7 (167-226)||(21568622-21568681)
chr7 (167-226)||(21880152-21880211)
chr7 (167-233)||(3554506-3554572)
chr7 (167-233)||(15680802-15680868)
chr7 (175-233)||(22868035-22868093)
chr7 (167-233)||(25481895-25481961)
chr7 (164-218)||(35297669-35297723)
chr7 (168-218)||(38143231-38143281)
chr7 (168-233)||(598201-598266)
chr7 (164-233)||(6630909-6630978)
chr7 (168-233)||(11061077-11061142)
chr7 (167-208)||(18213033-18213074)
chr7 (156-220)||(5409825-5409889)
chr7 (161-233)||(9408328-9408400)
chr7 (166-226)||(19992001-19992061)
chr7 (163-227)||(21140978-21141042)
chr7 (168-232)||(24146810-24146874)
chr7 (161-233)||(26329376-26329448)
chr7 (167-227)||(26733303-26733363)
chr7 (167-227)||(32287463-32287523)
chr7 (168-228)||(37742521-37742581)
[»] chr5 (39 HSPs)
chr5 (164-225)||(36838544-36838605)
chr5 (162-233)||(15410443-15410514)
chr5 (161-228)||(18592071-18592138)
chr5 (166-228)||(11685937-11685999)
chr5 (161-231)||(32766937-32767007)
chr5 (163-228)||(3966501-3966566)
chr5 (158-231)||(6471880-6471953)
chr5 (167-228)||(16203795-16203856)
chr5 (156-227)||(38749552-38749623)
chr5 (156-227)||(39205879-39205950)
chr5 (175-233)||(27144456-27144514)
chr5 (156-227)||(43001799-43001870)
chr5 (179-233)||(12927647-12927701)
chr5 (182-228)||(27932233-27932279)
chr5 (167-233)||(28588674-28588740)
chr5 (167-225)||(30502388-30502446)
chr5 (167-225)||(30542731-30542789)
chr5 (163-233)||(35017030-35017100)
chr5 (159-216)||(14873527-14873584)
chr5 (163-228)||(19579699-19579764)
chr5 (177-229)||(2577190-2577242)
chr5 (161-233)||(6035476-6035547)
chr5 (164-233)||(16734859-16734930)
chr5 (163-231)||(41091253-41091321)
chr5 (163-221)||(2236781-2236839)
chr5 (175-225)||(12264837-12264887)
chr5 (169-227)||(23220982-23221040)
chr5 (167-233)||(33178018-33178084)
chr5 (170-223)||(17593725-17593778)
chr5 (180-233)||(22013407-22013460)
chr5 (166-227)||(28296327-28296388)
chr5 (156-233)||(31084316-31084393)
chr5 (157-233)||(2436915-2436991)
chr5 (161-229)||(7677702-7677770)
chr5 (174-218)||(19293430-19293474)
chr5 (161-233)||(21522743-21522815)
chr5 (161-233)||(21533309-21533381)
chr5 (161-233)||(21814254-21814326)
chr5 (169-233)||(23012410-23012473)
[»] chr3 (33 HSPs)
chr3 (162-231)||(11313795-11313864)
chr3 (161-233)||(16192744-16192816)
chr3 (161-225)||(8039829-8039893)
chr3 (154-220)||(25948874-25948940)
chr3 (164-233)||(11665937-11666006)
chr3 (167-231)||(7928445-7928509)
chr3 (175-228)||(32804548-32804601)
chr3 (167-227)||(40993335-40993396)
chr3 (161-233)||(9800033-9800105)
chr3 (175-223)||(49505162-49505210)
chr3 (164-199)||(15314873-15314908)
chr3 (181-231)||(3618876-3618926)
chr3 (167-233)||(8383250-8383316)
chr3 (167-233)||(8789550-8789616)
chr3 (164-233)||(4990964-4991033)
chr3 (161-233)||(4987285-4987357)
chr3 (167-231)||(7614415-7614479)
chr3 (164-220)||(28678309-28678365)
chr3 (163-218)||(16789020-16789075)
chr3 (161-231)||(1509534-1509604)
chr3 (164-233)||(25064902-25064969)
chr3 (161-218)||(2731820-2731877)
chr3 (168-225)||(4201397-4201454)
chr3 (164-225)||(10455791-10455852)
chr3 (181-226)||(27277852-27277897)
chr3 (180-233)||(32429393-32429446)
chr3 (159-228)||(49651778-49651847)
chr3 (177-233)||(1438797-1438853)
chr3 (168-228)||(8842328-8842387)
chr3 (177-233)||(12704000-12704056)
chr3 (167-223)||(21419455-21419511)
chr3 (156-228)||(27505244-27505316)
chr3 (167-223)||(38731221-38731277)
[»] chr8 (32 HSPs)
chr8 (162-227)||(14634136-14634201)
chr8 (176-233)||(39954288-39954345)
chr8 (177-232)||(4611528-4611583)
chr8 (164-231)||(11803254-11803321)
chr8 (167-233)||(4786338-4786404)
chr8 (167-233)||(13844596-13844662)
chr8 (155-221)||(34222952-34223018)
chr8 (169-226)||(12570736-12570793)
chr8 (175-231)||(14731707-14731763)
chr8 (161-233)||(24362196-24362268)
chr8 (175-227)||(34897084-34897136)
chr8 (169-228)||(7658461-7658520)
chr8 (163-226)||(25172694-25172757)
chr8 (167-233)||(22595987-22596053)
chr8 (161-199)||(29447471-29447509)
chr8 (164-233)||(15816126-15816195)
chr8 (168-225)||(33382020-33382077)
chr8 (169-225)||(7442846-7442902)
chr8 (164-228)||(11927083-11927147)
chr8 (162-198)||(12402686-12402722)
chr8 (175-226)||(12570516-12570567)
chr8 (156-199)||(16641963-16642006)
chr8 (170-233)||(31236580-31236643)
chr8 (167-218)||(33405384-33405435)
chr8 (175-225)||(20785473-20785523)
chr8 (175-233)||(27213540-27213598)
chr8 (166-227)||(7472514-7472575)
chr8 (166-231)||(8342967-8343032)
chr8 (164-233)||(11944658-11944727)
chr8 (166-227)||(36934669-36934730)
chr8 (163-219)||(2572052-2572108)
chr8 (179-219)||(13203648-13203688)
[»] scaffold0020 (2 HSPs)
scaffold0020 (157-233)||(135302-135378)
scaffold0020 (163-217)||(137789-137843)
[»] chr4 (36 HSPs)
chr4 (159-231)||(15659752-15659824)
chr4 (162-228)||(13134448-13134514)
chr4 (167-233)||(2361975-2362041)
chr4 (168-233)||(715608-715674)
chr4 (168-233)||(752934-753000)
chr4 (167-229)||(8423718-8423780)
chr4 (175-233)||(40613443-40613501)
chr4 (161-231)||(51701253-51701323)
chr4 (162-227)||(5775353-5775418)
chr4 (161-233)||(22234884-22234957)
chr4 (161-233)||(35723378-35723451)
chr4 (161-230)||(43368075-43368144)
chr4 (177-233)||(903915-903971)
chr4 (156-228)||(3947755-3947827)
chr4 (165-233)||(13783274-13783342)
chr4 (184-228)||(17446069-17446113)
chr4 (169-225)||(36635325-36635381)
chr4 (167-226)||(15029765-15029824)
chr4 (176-227)||(22440609-22440660)
chr4 (161-224)||(30982872-30982935)
chr4 (161-228)||(40742589-40742656)
chr4 (175-218)||(55941011-55941054)
chr4 (156-198)||(7970547-7970589)
chr4 (157-231)||(18513231-18513305)
chr4 (162-216)||(18576032-18576086)
chr4 (161-199)||(19500852-19500890)
chr4 (175-233)||(24343500-24343558)
chr4 (168-222)||(33950140-33950194)
chr4 (167-228)||(4672085-4672146)
chr4 (168-225)||(7214523-7214580)
chr4 (179-228)||(21539879-21539928)
chr4 (163-220)||(30838216-30838273)
chr4 (175-227)||(999356-999408)
chr4 (175-227)||(26504307-26504359)
chr4 (163-199)||(46083987-46084023)
chr4 (161-233)||(46160889-46160961)
[»] chr6 (57 HSPs)
chr6 (162-233)||(20576628-20576699)
chr6 (167-226)||(32511666-32511725)
chr6 (154-220)||(7086801-7086867)
chr6 (157-226)||(9025484-9025553)
chr6 (164-233)||(9195751-9195820)
chr6 (168-225)||(32298608-32298665)
chr6 (157-233)||(9027171-9027247)
chr6 (169-233)||(9658872-9658936)
chr6 (162-226)||(10888969-10889033)
chr6 (167-223)||(24614413-24614469)
chr6 (167-233)||(5732510-5732576)
chr6 (167-225)||(7265593-7265651)
chr6 (175-233)||(19040345-19040403)
chr6 (156-233)||(12696317-12696394)
chr6 (165-225)||(7151413-7151473)
chr6 (161-233)||(26562682-26562754)
chr6 (161-221)||(34073341-34073401)
chr6 (167-218)||(14721249-14721300)
chr6 (167-233)||(7377972-7378038)
chr6 (167-233)||(9629376-9629442)
chr6 (175-233)||(10842525-10842583)
chr6 (163-225)||(21395304-21395365)
chr6 (175-233)||(30866152-30866210)
chr6 (176-225)||(1532241-1532290)
chr6 (171-231)||(7569172-7569232)
chr6 (153-220)||(8805560-8805625)
chr6 (161-233)||(8931596-8931668)
chr6 (175-227)||(13851735-13851787)
chr6 (161-233)||(16766690-16766762)
chr6 (175-219)||(17302354-17302398)
chr6 (156-208)||(17327644-17327696)
chr6 (177-233)||(24833243-24833299)
chr6 (182-226)||(25038086-25038130)
chr6 (179-231)||(33817944-33817996)
chr6 (164-215)||(7973665-7973716)
chr6 (193-231)||(322514-322552)
chr6 (163-233)||(677830-677900)
chr6 (167-233)||(7977830-7977896)
chr6 (163-233)||(18252747-18252817)
chr6 (167-233)||(20371110-20371176)
chr6 (167-225)||(20518346-20518404)
chr6 (175-221)||(24832593-24832639)
chr6 (167-228)||(30851600-30851659)
chr6 (167-233)||(33001289-33001355)
chr6 (166-231)||(4040461-4040526)
chr6 (168-233)||(7938109-7938174)
chr6 (167-228)||(7996378-7996439)
chr6 (167-228)||(8022362-8022423)
chr6 (166-223)||(9617437-9617494)
chr6 (160-205)||(16111750-16111795)
chr6 (167-228)||(21924935-21924996)
chr6 (156-216)||(9024165-9024225)
chr6 (161-233)||(9107364-9107436)
chr6 (164-228)||(10294105-10294169)
chr6 (161-233)||(16488584-16488656)
chr6 (161-233)||(18367829-18367901)
chr6 (158-226)||(19147842-19147910)
[»] chr2 (39 HSPs)
chr2 (164-231)||(44860315-44860382)
chr2 (175-233)||(31808070-31808128)
chr2 (168-233)||(42832277-42832342)
chr2 (161-233)||(34784976-34785048)
chr2 (170-233)||(23718019-23718082)
chr2 (170-233)||(24105691-24105754)
chr2 (175-233)||(21616755-21616813)
chr2 (163-219)||(18622613-18622669)
chr2 (157-233)||(24894382-24894458)
chr2 (182-233)||(21091716-21091767)
chr2 (162-233)||(30527590-30527661)
chr2 (167-225)||(31018591-31018649)
chr2 (168-218)||(40361755-40361805)
chr2 (176-225)||(2665897-2665946)
chr2 (162-231)||(17087935-17088003)
chr2 (180-233)||(19573971-19574024)
chr2 (175-228)||(37411252-37411305)
chr2 (168-228)||(18276519-18276579)
chr2 (163-227)||(24975321-24975385)
chr2 (167-218)||(22085012-22085063)
chr2 (177-228)||(28677907-28677958)
chr2 (163-226)||(29970545-29970608)
chr2 (180-231)||(31456654-31456705)
chr2 (163-226)||(35447883-35447946)
chr2 (156-231)||(44776594-44776669)
chr2 (161-219)||(12668417-12668475)
chr2 (158-216)||(13204035-13204093)
chr2 (161-191)||(18054797-18054827)
chr2 (169-218)||(2415325-2415374)
chr2 (162-231)||(17077007-17077075)
chr2 (161-198)||(35056896-35056933)
chr2 (182-227)||(39323263-39323308)
chr2 (167-219)||(5367199-5367251)
chr2 (157-228)||(14996213-14996285)
chr2 (163-231)||(17070937-17071004)
chr2 (181-233)||(21782832-21782884)
chr2 (167-223)||(23921256-23921312)
chr2 (167-223)||(34691805-34691861)
chr2 (167-223)||(34714217-34714273)
[»] scaffold1528 (1 HSPs)
scaffold1528 (161-233)||(1028-1100)
[»] scaffold0022 (1 HSPs)
scaffold0022 (163-227)||(99892-99956)
[»] scaffold0110 (1 HSPs)
scaffold0110 (158-233)||(28843-28918)
[»] scaffold0123 (1 HSPs)
scaffold0123 (161-226)||(44519-44584)
[»] scaffold0004 (1 HSPs)
scaffold0004 (182-233)||(92800-92851)
[»] scaffold0793 (1 HSPs)
scaffold0793 (168-233)||(4884-4950)
[»] scaffold0376 (1 HSPs)
scaffold0376 (161-231)||(6307-6377)
[»] scaffold0171 (1 HSPs)
scaffold0171 (156-233)||(23413-23490)
[»] scaffold0044 (1 HSPs)
scaffold0044 (161-233)||(53173-53245)
[»] scaffold0036 (1 HSPs)
scaffold0036 (164-228)||(9744-9808)
[»] scaffold0236 (1 HSPs)
scaffold0236 (164-218)||(25765-25819)
[»] scaffold0049 (1 HSPs)
scaffold0049 (168-225)||(63774-63831)
[»] scaffold0003 (1 HSPs)
scaffold0003 (164-233)||(241587-241656)
[»] scaffold1449 (1 HSPs)
scaffold1449 (163-231)||(1262-1329)
[»] scaffold0722 (1 HSPs)
scaffold0722 (167-227)||(7032-7092)
[»] scaffold0320 (1 HSPs)
scaffold0320 (169-225)||(17038-17094)
[»] scaffold0223 (1 HSPs)
scaffold0223 (161-233)||(20165-20237)
[»] scaffold0008 (1 HSPs)
scaffold0008 (161-225)||(263366-263430)


Alignment Details
Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 46894657 - 46894561
Alignment:
Q  8 gacatgtgccagacatcagacaagttgagaagtgttggtgctacaagagttgttatttgtttttcttgatgtgttaatttgattctgaaaaatgaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46894657 gacatgtgccagacatcagacaagttgagaagtgttggtgctacaaaagttgttatttgtttttcttgatctgttaatttgattctgaaaaatgaaa 46894561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 34712370 - 34712449
Alignment:
Q  154 cacgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||||  |||||||||||||||||||||||||  ||||||| ||||||||||| ||| ||||||||    
T  34712370 cacgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgt 34712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 5376495 - 5376566
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| |||| | |||||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgt 5376566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 6427413 - 6427351
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||||||||| | |||||||  ||||||| ||||||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 13436517 - 13436451
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||||||||||| ||||||| ||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgt 13436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 39953146 - 39953207
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcgg 39953207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 41877470 - 41877531
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| |||| | |||||||||||||||||| |||||||| |||||||||||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcgg 41877531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 17754376 - 17754304
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||  ||||||||| ||||||| ||||||| |||||| | ||||||||||||||||||||||||    
T  17754376 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 17754304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 20157340 - 20157416
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||  ||||||| | |||||||||||||||| |||||    
T  20157340 gtgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgt 20157416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 38503385 - 38503313
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||||| ||||||||||||||||| || |||   ||||||| ||||||||||||||||||||||||    
T  38503385 ccgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgt 38503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 1486698 - 1486768
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||||||||||||| |||| |||||||||||| |||||||  ||||| | ||||||||||| |||||    
T  1486698 cgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 12713329 - 12713379
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 12717420 - 12717470
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 21038148 - 21038086
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||||||||  || ||||| |||||||| ||||||| |||||||||||||||||||||||    
T  21038148 ccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggt 21038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 27471567 - 27471632
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||||| |||||||   |||||| |||||||||||||| |||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgt 27471632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 36878519 - 36878454
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||| |||||||||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 36878454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 44296488 - 44296556
Alignment:
Q  160 tccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    |||||||||||||| |||||||| |||| |||||||||||  ||||||| ||||||||| ||||||||||    
T  44296488 tccgacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattattaccggtgtcggt 44296556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 44482295 - 44482234
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcgg 222  Q
    ||||||||||||| ||||||||||||||||| |||||||  ||||||| ||||||| |||||    
T  44482295 ccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 40285648 - 40285720
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | |||||||| | |||||| |||||||  ||||||| |||||||||||||||| |||||||    
T  40285648 ccgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgt 40285720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 25361951 - 25361884
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||  ||||||||||||||||| |||||||  ||||||| ||||||| || ||||||||    
T  25361951 ccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcgg 25361884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 34371775 - 34371709
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||| ||||||||||||||||| |||||||  |||||| | |||||||||||||||| ||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttc-tcaattattagcggtgtcagtgt 34371709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 39130767 - 39130818
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 1864882 - 1864944
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||| ||||||||||||||||| |||||||  ||||||| ||||||||| | ||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 2784614 - 2784552
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtg 230  Q
    |||||| ||||||||||||| ||| |||||||  ||||||||||||| ||| |||||||||||    
T  2784614 gacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcggtg 2784552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 9828107 - 9828037
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| ||||||| ||||||||| |||||||  ||||| | |||||||||| |||||||| ||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 14332642 - 14332700
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| | |||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 19562613 - 19562687
Alignment:
Q  160 tccgacac-gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| |||||| ||||||||||||||||| || ||||  ||||||| ||||||||||| ||||||| ||||    
T  19562613 tccgacactgacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgt 19562687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 36906060 - 36905990
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| || ||||||||||||||||| || |||||||  ||||||| | |||||||||||||| |||||||    
T  36906060 gacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgt 36905990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 25098563 - 25098616
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||||| |||||||  ||||||| ||||||| |||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcgg 25098616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 34298482 - 34298429
Alignment:
Q  180 tataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| |||||||  ||||||| |||||||||| |||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgt 34298429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 7918207 - 7918263
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||||||  ||||||||||||||||| |||||||  ||||||| ||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 13997940 - 13997876
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||||||||| |||||||  ||||| |||||| |||| ||||||||| ||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgt 13997876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 34257922 - 34257970
Alignment:
Q  179 atataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtcg 34257970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 35999322 - 35999374
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||| ||||||||||||||| ||||||||||   ||||||||||||||||||    
T  35999322 cgacatcaacacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 40181930 - 40181866
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||| | ||||||||||||||| |||||||  ||||||| ||||||||||| ||||| ||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctgtgt 40181866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 113363 - 113292
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| |||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 9629895 - 9629966
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| |||| |||||| ||||| ||||||   ||||| | |||||||||||||||||| |||||    
T  9629895 cgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgt 9629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 42325616 - 42325553
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||  ||||||| |||||||  ||||||| ||||||||| |||||| |||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgttggtgtgt 42325553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 398773 - 398831
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| |||||||||||| |||||||  ||||| | ||||||||||||||||||| ||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgt 398831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 7353493 - 7353559
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||| ||||||||||||||||||||| |||||| |  ||||| |||| | ||||||||||    
T  7353493 cgacaccgacatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgt 7353559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 9709879 - 9709821
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| |||||||||||||||   |||||||  ||||||| ||||||||||||||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 10233304 - 10233246
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| || ||||||| ||||| |||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgt 10233246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 12707875 - 12707925
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||| |||||||||| |||||||||||   ||||||||||||||||||    
T  12707875 acaccaatacatataattgcactaaattatatgattttcttaaattattag 12707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 17831539 - 17831597
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| |||||||| ||| |||  ||||||| ||||||||||||||||||| ||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgt 17831597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 19637827 - 19637761
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||||||| |||||| | ||| |||  ||||||||||||||||| |||||||| |||||    
T  19637827 cgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcgatgtgt 19637761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 25272544 - 25272494
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaatt 214  Q
    |||||||||| |||| ||||||||||||||||||||  ||||||| |||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 26238121 - 26238174
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    ||||||||| ||||||| |||||||  ||||||| ||||||||||||||||||||    
T  26238121 acacatata-ttacactgaattatgttattttctcaaattattagcggtgtcggt 26238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 29163381 - 29163447
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||| | | |||||||  |||||| |||||| ||||||||||||| ||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgt 29163447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 37055871 - 37055909
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagc 220  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 41017405 - 41017455
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||| ||||||||||| |||||||||  ||||||| |||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 52903308 - 52903242
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||| ||||||   ||||| ||||||||||| |||| |||| ||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgt 52903242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 2896122 - 2896187
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| ||| |||||  |||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 2896187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 12443469 - 12443526
Alignment:
Q  176 cacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| ||||||||| |||||||  ||||||| ||||||||||| ||||||| ||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 12993257 - 12993192
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||| ||||| ||| ||||||||||| | ||||| | ||||| | ||||||||||||||||||||    
T  12993257 gacacaacaccgacatatataattacattgaattacgtaatttacgtaaattattagcggtgtcgg 12993192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 23714712 - 23714765
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||| |||||||||||| ||||||| ||||||||  |||| |||||||||||||    
T  23714712 acacgtataattacacttaattatgtaattttctctaatttttagcggtgtcgg 23714765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 29229521 - 29229456
Alignment:
Q  167 cgacaccaacacatataattac-actaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||| |||||||||||||| ||||||| |||  ||||||| ||||||||||| ||||| ||||    
T  29229521 cgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtcagtgt 29229456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 32724106 - 32724159
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||| ||||||||| || ||||| ||||||||| || ||||||    
T  32724106 acacatataattacattaaattatgtaaatttctcaaattattaacgatgtcgg 32724159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 47989562 - 47989505
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||||||||| |||| | |||||||||| |||||||  ||||| |||||||||||    
T  47989562 ccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 5898267 - 5898327
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| || |||||||||||||| |||||||  ||||| | | |||||||||||||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcgg 5898327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 6612166 - 6612222
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||||| |||| | |||||||||| ||||||| |||||| | |||||||||    
T  6612166 cgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 21378635 - 21378571
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| |||| | |||||||||| ||||||| |||||| | || |||||||| ||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgt 21378571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 23738735 - 23738675
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    |||||||||||| ||||| |||| |||||||  ||||| | ||||||||||| ||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 23738675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 233
Target Start/End: Original strand, 33384526 - 33384648
Alignment:
Q  111 tgtttattgaaatgtttgttgatatatgaagcaccgacacttccacgtgtccgacacgacaccaacacatataattacactaaattatggaattttctta 210  Q
    |||||||| |||||| ||||||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||| |    
T  33384526 tgtttattaaaatgtatgttgatctatgaagcactgacacttccacctgtccgacaccacaccaacacatataattacactaaattataggattttctca 33384625  T
Q  211 aattattagcggtgtcggtgtgt 233  Q
     ||||||| ||||||||||||||    
T  33384626 gattattaacggtgtcggtgtgt 33384648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 8160481 - 8160411
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  8160481 ccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtcagtgt 8160411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 5236049 - 5235985
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||| | | ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcg 5235985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 27093415 - 27093475
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    ||||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcggt 27093475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 27184886 - 27184826
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    ||||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcggt 27184826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 1433522 - 1433447
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||| |||||||||||||||| |||| |||  ||||||| ||||||||| ||||||||| ||||    
T  1433522 tgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgt 1433447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 7328686 - 7328744
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||| |||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 20549850 - 20549784
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||| ||||| |  ||||||| ||||||||||||||||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgt 20549784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 22484083 - 22484018
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| ||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||| ||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgt 22484018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 5233698 - 5233622
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||  ||||||| ||||||||| | || |||||||||    
T  5233698 gtgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgt 5233622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 32308185 - 32308113
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||  ||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  32308185 ccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 32308113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 5548745 - 5548674
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||||  ||||||||||||||||| ||||||   ||||||| ||||||| |||||||||||    
T  5548745 gtgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcgg 5548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 13770760 - 13770689
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||| | |||| | |||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  13770760 gtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcgg 13770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 16341565 - 16341491
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||||||||  |||||||||||||||| |||||||  ||||||| ||||||||| | ||||| ||||    
T  16341565 gtgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtccgtgt 16341491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaatta 215  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 27945104 - 27945034
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| |||| | |||||||||| ||||||| |||||||| |||||||||| |||||||| ||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgt 27945034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 7758391 - 7758322
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||||||||||| ||||| ||||||| ||| ||||||  |||||||| |||||||||| ||||||    
T  7758391 gtgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtc 7758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 49107882 - 49107814
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| ||||||||||| ||||| |||||||   |||||| ||||||||||||||||||||||||    
T  49107882 acacgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgt 49107814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 18013070 - 18013126
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 2948739 - 2948676
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| ||||||||||||||||||||||| |  ||||||| ||||||| ||||||||||| ||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgt 2948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 15902887 - 15902820
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| ||||| |||||||||||||||||||||||||  ||||| | |||||||||  ||||||||    
T  15902887 ccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcgg 15902820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 22602705 - 22602776
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| ||||||||||||||||| |||||||  ||||||| |||| |||  ||||||||| ||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgt 22602776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 27732247 - 27732290
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||    
T  27732247 acacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 9482993 - 9482927
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||| |||| ||  ||||||| ||||||| |||| |||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgt 9482927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 17851482 - 17851424
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||| ||| |||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgt 17851424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 28155629 - 28155563
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| | |||||||||  ||||||| |||||||| ||||||||||||||||||| ||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 3721152 - 3721099
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    ||||||| ||||||||||||| |||||||||||  ||||||| |||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 19206108 - 19206043
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| ||||||||||||| | | |||||||  ||||||| ||||||||||||||||||| ||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19206043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 29787373 - 29787435
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||  |||||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 5835305 - 5835245
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| ||||||||||||||||| |||||||  ||||||| ||| |||||| ||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcgg 5835245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 12278886 - 12278830
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||||||||| |||||||  ||||||||||||||||| | |||| |||||    
T  12278886 acacatataattacactgaattatgtcattttcttaaattattatcagtgttggtgt 12278830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 21138987 - 21139051
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||||||||| ||||||||||||||| | |||||||  ||||||| ||||||||| ||||||    
T  21138987 tgtccgacacgacaccgacacatataattacagt-aattatg--attttctcaaattattaacggtgt 21139051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 24339707 - 24339635
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  24339707 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 21568622 - 21568681
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||| || ||||| |||||||| |||||||  ||||||||||||||||||| |||||    
T  21568622 cgacaccgactcatatgattacacttaattatgagattttcttaaattattagccgtgtc 21568681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 21880211 - 21880152
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||| |||| | |||||||||| ||||||| |||||||| |||||||||||| ||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 21880152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 3554506 - 3554572
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||  |||||||||| ||||||||| |||||||||||||||| |  |||||||| ||||    
T  3554506 cgacaccgacatctataattacattaaattatgtaattttcttaaattatcattggtgtcggcgtgt 3554572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 15680868 - 15680802
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| ||||||||||||||||||||  ||||| || ||||||||||  |||||| ||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgt 15680802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 22868093 - 22868035
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| | |||||||| |||||||| ||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgt 22868035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 25481961 - 25481895
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||||||||||||||||| | | |||||||  ||||||| |||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 38143281 - 38143231
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||||||||||||||| |||||||||  ||||| | |||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 598266 - 598201
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||| || ||||||| | ||||| |  |||||||||||||||||||||||||| |||||    
T  598266 gacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgt 598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 6630909 - 6630978
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| | ||||||||||||||||| ||||| |  | ||||| |||||||||| |||||||| ||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgt 6630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 11061077 - 11061142
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||| | |||||| |||||||||||  ||||| | ||||||||||| ||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgt 11061142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 18213033 - 18213074
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttct 208  Q
    ||||||| |||||||||||||||||||||||||  |||||||    
T  18213033 cgacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 5409825 - 5409889
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    |||||||||||||||||| |||| | ||||| |||| |||||||  ||||| | |||||||||||    
T  5409825 cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 9408328 - 9408400
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| |||||||| |||| | ||||||||||||||||||  ||||| | |||||||||   ||||||||||||    
T  9408328 ccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgt 9408400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||| |||| |||||||||||| || ||||  ||||||| ||||||||||| |||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 21140978 - 21141042
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||| || |||| |||||| ||||| ||||||   |||||||||||||||||| |||||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcg 21141042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 24146874 - 24146810
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtg 232  Q
    |||||| ||||||||||||| | | |||||||  ||||||| |||||||||||  ||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagcattgtcggtgtg 24146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 26329376 - 26329448
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| || ||||||||||||||||| |||| ||   |||||| ||||||||| || |||||| ||||    
T  26329376 ccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgt 26329448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 26733363 - 26733303
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||| |||||| |||||| ||| |||||||  ||||| | ||||||||||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcg 26733303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 32287463 - 32287523
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||| ||||||||| || |||| |||||||  ||||||| | ||||||||||||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 37742581 - 37742521
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| |||||||| |||||| | ||| ||| |||||| |||||||||||| ||||||||    
T  37742581 gacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcgg 37742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 15410443 - 15410514
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||||||||||||| |||||||| ||| ||  |||||||||||||||||||||||||||| ||||    
T  15410443 cgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgt 15410514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 18592138 - 18592071
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||||||  |||||||||||||| | ||||||| |||||||||||| |||||||||||||||    
T  18592138 ccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcgg 18592071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 11685999 - 11685937
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||| |||||||||||||||||||||||||  | ||||| |||||||||||||||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcgg 11685937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 32766937 - 32767007
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||| |||||||||||||||| | |||| ||  ||||||| ||||||||||||||||||||||    
T  32766937 ccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcggtgt 32767007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 3966566 - 3966501
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||| ||||||||||||||||| |||| ||  ||||||| |||||||||||||||||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcgg 3966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6471880 - 6471953
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||| |||||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||| ||||| ||||    
T  6471880 tgtcccacacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgt 6471953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 16203795 - 16203856
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||| |||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcgg 16203856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 38749552 - 38749623
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||||||| ||||||||||||||||||||| | |||||||  ||||| | ||||||||| ||||||||    
T  38749552 cgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcg 38749623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 39205950 - 39205879
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||| ||||||||||||||||||||||||||||  ||||||   ||||||| ||||||||||| ||||||    
T  39205950 cgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcg 39205879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 27144514 - 27144456
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||||||||||  |||| || ||||||||||||||||||| ||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgt 27144456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 43001870 - 43001799
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||  ||||||||| | |||||||||| ||||||| |||||| | ||||||||||| ||||||    
T  43001870 cgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcg 43001799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 12927701 - 12927647
Alignment:
Q  179 atataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||||||   ||||||| |||||||||||| |||||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgt 12927647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 27932279 - 27932233
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcgg 27932233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 28588674 - 28588740
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| |||||||||||| |||||||  ||||||| ||||||||| ||||||||| ||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| ||||||||||||||||| ||||| |  ||||||| ||||||||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| ||||||||||||||||| ||||| |  ||||||| ||||||||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 35017100 - 35017030
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| | | ||||||||||||||||||||||  ||||||| |||||||||| ||| |||| ||||    
T  35017100 gacacgacactatcccatataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgt 35017030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 14873584 - 14873527
Alignment:
Q  159 gtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattat 216  Q
    |||||||| |||||| |||||||||||||||||||||||||   |||||| |||||||    
T  14873584 gtccgacatgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 19579764 - 19579699
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||| |||| | ||||| ||||||||||||  ||||||| ||||||||||| |||||||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcgg 19579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 2577190 - 2577242
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    |||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgtcggt 2577242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 6035547 - 6035476
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| ||| ||||||||||||| ||||||   | ||||| ||||||||||||||||||| ||||    
T  6035547 ccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgt 6035476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 16734930 - 16734859
Alignment:
Q  164 acacgacaccaacacatataattacac--taaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| ||||||||||||||||  |  |||||  |||||||||||||||||| ||||||||| ||||    
T  16734930 acacgacaccgacacatataattacacacttgattatataattttcttaaattattaacggtgtcggcgtgt 16734859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 41091253 - 41091321
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||| | ||||||||||||||||| |||||||  ||||||| |||| |||||| ||||| ||||    
T  41091253 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtccgtgt 41091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 2236781 - 2236839
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcg 221  Q
    ||||||||||| |  |||| ||||||| ||||||||  |||||||||||||||||||||    
T  2236781 gacacgacaccgatgcataaaattacattaaattatataattttcttaaattattagcg 2236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 12264837 - 12264887
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||| ||| ||| |||||||| |||| |||||||||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 23221040 - 23220982
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||| |||||||| || |||||||||||||  ||||| | ||||||||||||||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcg 23220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 33178084 - 33178018
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| | ||||||||||||||||||  ||||| ||||||||||||  ||||||| ||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 17593725 - 17593778
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    |||||||| ||||||||||||| ||||| |  ||||||| ||||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 22013460 - 22013407
Alignment:
Q  180 tataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||||| ||||||   ||||||||||| ||||||| ||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgt 22013407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 28296388 - 28296327
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||| | |||| | |||||||  ||||||| ||||||||| ||||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcg 28296327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 31084393 - 31084316
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||| | |||| | |||||||| | |||||||  ||||| | ||||||||||| ||||||| ||||    
T  31084393 cgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgt 31084316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 2436991 - 2436915
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||| ||||||||||| |||   |||||||  |||||   ||||||||||||||||||| ||||    
T  2436991 gtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgt 2436915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 7677770 - 7677702
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    ||||||||||||| |||| | ||||| |||| |||||||  ||||| | ||||||||||| ||||||||    
T  7677770 ccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 7677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 19293430 - 19293474
Alignment:
Q  174 aacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||||| |||||||| |||||||  |||||||||||||||||    
T  19293430 aacacatatgattacacttaattatgttattttcttaaattatta 19293474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 21522815 - 21522743
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||  | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  21522815 ccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21522743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 21533381 - 21533309
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||  | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  21533381 ccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21533309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 21814326 - 21814254
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||||||||||||  ||| ||  ||||||| |||  |||||| ||||||| ||||    
T  21814326 ccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt 21814254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 23012410 - 23012473
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||||||| ||||||||   ||||||| |||||||||||  |||||||||||    
T  23012410 acaccgacacatataattacattaaattatatgattttctcaaattattagc-atgtcggtgtgt 23012473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 11313795 - 11313864
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcggtgt 11313864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 16192744 - 16192816
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||||| ||||||||||||||    
T  16192744 ccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgt 16192816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 8039829 - 8039893
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||| ||||||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  8039829 ccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25948874 - 25948940
Alignment:
Q  154 cacgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||  ||||| | |||||||||||    
T  25948874 cacgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 11666006 - 11665937
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| |||||||||||||||||||||| ||  ||||| | |||||||||||| |||||||||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgt 11665937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 7928509 - 7928445
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||| ||||||||||||||||| |||||||  ||||| | ||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 32804548 - 32804601
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcgg 32804601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 40993335 - 40993396
Alignment:
Q  167 cgacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcg 227  Q
    ||||||| ||||||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcg 40993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 9800105 - 9800033
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||| || ||||||||  ||||||| |||||||| |||||||||| |||||||| ||||    
T  9800105 ccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgt 9800033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 49505162 - 49505210
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  49505162 acacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 15314873 - 15314908
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatg 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatg 15314908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 3618926 - 3618876
Alignment:
Q  181 ataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||| || |||||||||||||||| ||||||||||||||||| ||||    
T  3618926 ataattacgctgaattatggaattttctcaaattattagcggtgtcagtgt 3618876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 8383316 - 8383250
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| |||||||||||| ||||||   ||||||| ||||||||||||||||||| ||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgt 8383250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 8789550 - 8789616
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||  |||||||  ||||||| ||||||| ||| ||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgt 8789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 4990964 - 4991033
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| || |||| | |||||||||| ||||||| |||||||| ||| ||||||||||||||| ||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgt 4991033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 4987285 - 4987357
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| ||||||||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  4987285 ccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 4987357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 7614415 - 7614479
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||| ||| ||||||||| ||| |||||||  ||||||||||||||||| | ||||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgt 7614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 28678365 - 28678309
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    |||||||||| ||||||| ||||| |||||||||||  ||||| |||||||||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 16789075 - 16789020
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||||||||| |||||||||||| ||||||   ||||| |||||||||||    
T  16789075 gacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 1509604 - 1509534
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||| |||||||| |||| | ||||||||||||||||||  ||||| | ||||||||||| ||||| ||||    
T  1509604 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 1509534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 25064969 - 25064902
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||||||||||  ||||||||||||||||  ||||| | |||| |||||||||||||| ||||    
T  25064969 acacgataccaacacata--attacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgt 25064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 2731877 - 2731820
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| |||||    
T  2731877 ccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtatta 2731820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 4201454 - 4201397
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||| ||||||||||||| |||||||  ||||| | ||||||||| ||||||    
T  4201454 gacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 10455852 - 10455791
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||||||||||||||||||||| | ||||   ||||||| | ||||||||| ||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgt 10455791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  181 ataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||||||||||||||  ||||||| ||||||||||| |||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 32429393 - 32429446
Alignment:
Q  180 tataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| |||||||  |||||||||||||||||||| |||||| ||||    
T  32429393 tataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgt 32429446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 49651778 - 49651847
Alignment:
Q  159 gtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||| |||| | |||||||| | |||||||  ||||| | ||||||||||| |||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcgg 49651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 1438853 - 1438797
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| ||| |||||||  ||||||| ||||| |||||| |||||||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgt 1438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 8842387 - 8842328
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| ||| |||||||||||| ||||||||  ||||||  |||||||||||||||||||    
T  8842387 gacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtcgg 8842328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 12704056 - 12704000
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||| |||||||   |||||| |||||||||| |||||||| ||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 21419455 - 21419511
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||||||| ||||||||||| | ||||||   ||||||||||||||||| ||||    
T  21419455 cgacaccaacatatataattacattgaattatattattttcttaaattattaacggt 21419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 27505316 - 27505244
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| ||||||||||| |||| | |||||||||| |||||||  |||||   ||||||||||| |||||||    
T  27505316 cgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcgg 27505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 38731277 - 38731221
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||| |||||||||| |||||| |||||||  ||||| | ||||||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 14634136 - 14634201
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||||||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||||    
T  14634136 cgacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtcg 14634201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 39954288 - 39954345
Alignment:
Q  176 cacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 4611583 - 4611528
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtg 232  Q
    ||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 11803321 - 11803254
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||| ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| ||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgt 11803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 4786338 - 4786404
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||||||||||  |||||||| ||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgt 4786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 13844596 - 13844662
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||| ||||||| ||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 34223018 - 34222952
Alignment:
Q  155 acgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcg 221  Q
    ||||||||||||| | ||| ||||||||||||||||| |||||||  ||||| ||||||||||||||    
T  34223018 acgtgtccgacaccataccgacacatataattacacttaattatgtgattttattaaattattagcg 34222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 12570736 - 12570793
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||| ||||||||||||| |||||||   ||||||||||||||||||||||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 14731763 - 14731707
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||| ||||| ||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtctgtgt 14731707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 24362196 - 24362268
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||   ||||||||||||||||| |||||||  ||| ||| ||||||||||||||||||| ||||    
T  24362196 ccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgt 24362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 34897136 - 34897084
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||    
T  34897136 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 7658520 - 7658461
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||| ||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcgg 7658461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 25172694 - 25172757
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||||| ||||||||||||||| |||| |||| |||||| | ||||||||||| |||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtc 25172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 22596053 - 22595987
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| | |||||||||| |||||||  ||||| ||||||||||||| ||||||| ||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgt 22595987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 29447509 - 29447471
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatg 199  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  29447509 ccgacacgacaccaacacatataattacacttaattatg 29447471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 15816126 - 15816195
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| |||| ||||||||||||||||||||  ||||| | ||||||||||  ||||||| ||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgt 15816195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 33382020 - 33382077
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||| |||||||||||||| || |||||||  ||||||||||||||||| ||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7442902 - 7442846
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||| | |||||||||| ||||||| |||||| | ||||||||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 11927083 - 11927147
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| ||||||||||||||||| |||||||  ||||| | ||||||||| | |||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcgg 11927147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 12402686 - 12402722
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattat 198  Q
    |||||||||||||||||||||||||||| ||||||||    
T  12402686 cgacacgacaccaacacatataattacattaaattat 12402722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 12570516 - 12570567
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||||||||||| |||||||   |||||||||||||||||| |||||    
T  12570516 acacatataattacacttaattatgtgtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 16641963 - 16642006
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatg 199  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  16641963 cgtgtccgacacgacaccgacacatataacgacactaaattatg 16642006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 31236580 - 31236643
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| ||||||||||||||| | |||||||  ||||||| ||||||||||| ||||||| ||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 33405384 - 33405435
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 20785473 - 20785523
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||| |||||||||  |||| || ||||||||||||||||    
T  20785473 acacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 27213598 - 27213540
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||| | |||||||  ||||||| ||||||||||| ||||||| ||||    
T  27213598 acacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgt 27213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 7472514 - 7472575
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||  ||||||||||||||||||| |||||  ||||  |||||||||||| |||||||    
T  7472514 acgacacagacacatataattacactaatttatgtgatttctttaaattattagtggtgtcg 7472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 8343032 - 8342967
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||| |||| | ||||||||||||||||||  ||||| | |||||||||||  |||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 11944727 - 11944658
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| ||||||||||||||||| | |||||  ||||| | ||||||||| | ||||||| ||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 36934730 - 36934669
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||| |||||||||||||||||| | |||||||  ||||| |  |||||||||||||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcg 36934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 2572052 - 2572108
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||||||| |||| | ||||||||||||||||||  ||||| | ||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 13203688 - 13203648
Alignment:
Q  179 atataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||||||||| ||||||| |||||||| ||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 135302 - 135378
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||  ||||||| ||||||||||| ||||||||||||    
T  135302 gtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 137843 - 137789
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattatt 217  Q
    |||||||||||||||||||| | |||||| |||| ||  ||||||||||||||||    
T  137843 gacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 15659752 - 15659824
Alignment:
Q  159 gtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||||||||||||||||||||||||  |||||||  ||||||| ||||||||||| |||| |||||    
T  15659752 gtccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgttggtgt 15659824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 13134514 - 13134448
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| | |||||||||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  13134514 cgacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcgg 13134448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 2361975 - 2362041
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| | |||||||||||||||||| |||||| | ||||||||||| ||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgt 2362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 715608 - 715674
Alignment:
Q  168 gacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||||||||| ||||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 752934 - 753000
Alignment:
Q  168 gacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||||||||| ||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 753000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 8423718 - 8423780
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggt 229  Q
    ||||||| |||  |||||||||||| |||||||  ||||||| ||||||||||||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcggt 8423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 40613501 - 40613443
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| ||| ||||||||||||||| ||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 51701323 - 51701253
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||| ||||| | |||||||||| ||||||| |||||| | ||||||||||| ||||| ||||    
T  51701323 ccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtccgtgt 51701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 5775353 - 5775418
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||| |||||| ||||||||||||||||| |||||||  ||||||| |||||||||  |||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 22234884 - 22234957
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| ||||||| ||||||||| ||||||| || |||| | ||||| ||||||||||||| ||||    
T  22234884 ccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 35723378 - 35723451
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| |||||||  ||||||||||||||| | ||||||| | ||||||| ||||||||||||||||||| ||||    
T  35723378 ccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgt 35723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 43368144 - 43368075
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtg 230  Q
    |||||||||||||||||||||| || | | |||| | ||  ||||||||||||||||| |||||||||||    
T  43368144 ccgacacgacaccaacacatatgatcatattaaactgtgtcattttcttaaattattatcggtgtcggtg 43368075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 903971 - 903915
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||| |||||||  ||||||| ||||||||| ||||| ||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgt 903915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 3947755 - 3947827
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||||||||||  |||| | |||||||||| |||||||  ||||| | ||||||||||| |||||||    
T  3947755 cgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcgg 3947827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 13783342 - 13783274
Alignment:
Q  165 cacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||  |||||||||||||||| |||| ||  || |||| |||| |||||||||||||||||||    
T  13783342 cacgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgt 13783274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 17446113 - 17446069
Alignment:
Q  184 attacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||    
T  17446113 attacactaaattatgtgattttcttaaattattagtggtgtcgg 17446069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 36635381 - 36635325
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||| |||||||||||||||||| |||||||  ||||||| |||||||||| |||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgt 36635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 15029824 - 15029765
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||||||||||||||||||| |||||||  || || | ||||||||||| |||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtc 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 22440609 - 22440660
Alignment:
Q  176 cacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||||||||||| |||||||  ||||||| ||||||||| ||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 30982872 - 30982935
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtg 224  Q
    ||||||||||||| |||| |||||||||||| || ||||  ||||||| |||| ||||||||||    
T  30982872 ccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 40742656 - 40742589
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||| | |||||||||||||||||| |||||   ||||||| |||||||||  ||||||||    
T  40742656 ccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcgg 40742589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 55941011 - 55941054
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||    
T  55941011 acacatatgattatactaaattatgtaattttcttaaattatta 55941054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 7970589 - 7970547
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattat 198  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||    
T  7970589 cgtgtctgacacgacaccaaaacatataattacactgaattat 7970547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 18513231 - 18513305
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||| ||||  |||||||| |||||| | |||||||  ||||||| ||||||||| ||||||| ||||    
T  18513231 gtgtccgacacaacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtctgtgt 18513305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 18576032 - 18576086
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattat 216  Q
    ||||| |||||||||||||||||||||||  |||||||  ||||||| |||||||    
T  18576032 cgacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 19500852 - 19500890
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatg 199  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  19500852 ccgacacgacaccatcacatataattacactaaaatatg 19500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 24343558 - 24343500
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| | ||||||| ||||    
T  24343558 acacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgt 24343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 33950194 - 33950140
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcgg 222  Q
    |||||| |||||||| |||||| |||||||||  ||||||| |||||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 4672085 - 4672146
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| |||||||||  |||||| ||||||| |||||||  ||||||||||| |||||||    
T  4672085 cgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcgg 4672146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 7214523 - 7214580
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||| || |||||||||||| |||||||||  ||||||| |||||||||| |||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgt 7214580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 21539879 - 21539928
Alignment:
Q  179 atataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||||||||   |||||||||||||||||  ||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcgg 21539928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 30838273 - 30838216
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    ||||||||||| | || |||||||||||||||||||  |||||| | |||||||||||    
T  30838273 gacacgacaccgatacttataattacactaaattatataattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 999356 - 999408
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||||||||||   |||| || |||||||||||| |||||    
T  999356 acacatataattacactaaattatatgatttactcaaattattagcgatgtcg 999408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 26504307 - 26504359
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||| || |||   ||||||||||||||||||| ||||||    
T  26504307 acacatataattacactgaactatttgattttcttaaattattagcagtgtcg 26504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 46083987 - 46084023
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatg 199  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  46083987 gacacgacaccgacacatataattacactagattatg 46084023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 46160961 - 46160889
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| ||||||||||| ||||| |||||||  ||||||| | ||| ||| ||| ||||| ||||    
T  46160961 ccgacacgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgt 46160889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 20576628 - 20576699
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||  |||||||||| | ||||||||||    
T  20576628 cgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattagccgcgtcggtgtgt 20576699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 32511666 - 32511725
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 7086867 - 7086801
Alignment:
Q  154 cacgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||  ||||||| |||||||||||    
T  7086867 cacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 9025484 - 9025553
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||| |||||    
T  9025484 gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 9195751 - 9195820
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||  |||||| |||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 32298608 - 32298665
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||    
T  32298608 gacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 9027247 - 9027171
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||  ||| ||| ||||||||||||||||||| ||||    
T  9027247 gtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgt 9027171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 9658936 - 9658872
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||| ||| ||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgt 9658872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 10888969 - 10889033
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||||| |||||||||||| |||||||||||||  ||||| | |||||||||||||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 24614469 - 24614413
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||    
T  24614469 cgacaccaacacatacaattacactaaattatataatttttttaaattattagcggt 24614413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 5732510 - 5732576
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||||||||||||||||||| ||||  ||||||| ||||||||| ||||||||| ||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgt 5732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 7265593 - 7265651
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 19040403 - 19040345
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  19040403 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 12696394 - 12696317
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||  |||| | |||||||||| ||||||| |||||| | ||||||||||| ||||||| ||||    
T  12696394 cgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 12696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 7151473 - 7151413
Alignment:
Q  165 cacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||||||||| |||||||  ||||| | |||||||||| |||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgt 7151413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 26562754 - 26562682
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | ||||||||||||||||| |||||||  ||||||| ||||| ||||| ||||||| ||||    
T  26562754 ccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgt 26562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 34073341 - 34073401
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcg 221  Q
    ||||||||||||| || |||||||||||||| |||||||  ||||||| ||||||||||||    
T  34073341 ccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcg 34073401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 14721300 - 14721249
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||||||||||||||||| | | ||||||| ||||||||||||||||||    
T  14721300 cgacaccaacacatataattatagtgaattatgtaattttcttaaattatta 14721249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 7378038 - 7377972
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||| | |||||||  ||||||| ||||| ||||||||||||| ||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgt 7377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 9629442 - 9629376
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||| | |||||||  ||||||| |||||||| |||||||||| ||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgt 9629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 10842583 - 10842525
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| ||||||||||||||||  ||||| | ||||||||||||||||||| ||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 21395304 - 21395365
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||| |||| | ||||||||||||||||| | ||||||| ||||||||||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattat-gtattttctcaaattattagcggtgt 21395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 30866152 - 30866210
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||| | |||||||  ||||||| |||||||||||||||| |||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgt 30866210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  176 cacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 7569172 - 7569232
Alignment:
Q  171 accaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||| |||||||||||| ||||||| |||||||| ||||||||| | |||| |||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattattatctgtgttggtgt 7569232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 8805560 - 8805625
Alignment:
Q  153 ccacgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagc 220  Q
    ||||||||| ||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||||||    
T  8805560 ccacgtgtctgacactacaccgacacata--attacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 8931596 - 8931668
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | ||||||||||||| ||| |||||||  ||||||| ||||| ||||| ||||||| ||||    
T  8931596 ccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 13851787 - 13851735
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||| ||||| |  ||||||| ||||||||||||||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgtcg 13851735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 16766762 - 16766690
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  16766762 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 16766690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 17302398 - 17302354
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattag 219  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||    
T  17302398 acacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 17327644 - 17327696
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttct 208  Q
    |||||||||||||||||  ||||||||| |||||||||||||||  |||||||    
T  17327644 cgtgtccgacacgacactgacacatatagttacactaaattatgtgattttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 24833243 - 24833299
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||||||||  |||||||||| |||||||  ||||||| ||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgt 24833299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 25038086 - 25038130
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtc 25038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 33817996 - 33817944
Alignment:
Q  179 atataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||||| ||||||| ||||||||  |||||||||||||||| ||||    
T  33817996 atataattacactgaattatgaaattttctccaattattagcggtgtcagtgt 33817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 7973716 - 7973665
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaatta 215  Q
    |||||||||| |||| |||||||||||| ||||||| |||||| ||||||||    
T  7973716 acacgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 322552 - 322514
Alignment:
Q  193 aattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  322552 aattatgtaattttcttaaattattagtggtgtcggtgt 322514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 677900 - 677830
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||| ||||||| ||||||| |||||   ||||||| ||||||||| | ||||||| ||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgt 677830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 7977830 - 7977896
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| |||| | |||||||||| ||||||| |||||| | ||||||||||| ||||||| ||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 18252747 - 18252817
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||| |||| | ||||||||||||||||||  ||||| ||||||||||| |||| |||| ||||    
T  18252747 gacacgataccgacacctgtaattacactaaattatgtcatttttttaaattattatcggtatcggagtgt 18252817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 20371110 - 20371176
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||| ||| | | |||||  ||||||| ||||||||||||||||||| ||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgt 20371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 20518404 - 20518346
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| ||||| |||| |||||    
T  20518404 cgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgt 20518346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 24832639 - 24832593
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcg 221  Q
    ||||||||||||||||||||||||   ||||||| ||||||||||||    
T  24832639 acacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 30851659 - 30851600
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| ||||||||||||||| | |||| ||  ||||||||||||||||||| |||||||    
T  30851659 cgacaccgacacatataattacattgaattgtg--attttcttaaattattagcagtgtcgg 30851600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 33001289 - 33001355
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||||||||||||| | |||||||  ||||| | ||||||||||| ||||||| ||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 4040526 - 4040461
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||| || ||| ||||||||| ||| ||| |||  |||||||||||||||||| |||||||||||    
T  4040526 acgacgccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcggtgt 4040461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 7938174 - 7938109
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||| |||||||||||||||||||   ||||| | ||||||||||| ||||||| ||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgt 7938109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 7996378 - 7996439
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| || |||||||||||||| ||||||   ||||||| ||||||||||| |||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcgg 7996439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 8022423 - 8022362
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| || |||||||||||||| ||||||   ||||||| ||||||||||| |||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcgg 8022362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 9617494 - 9617437
Alignment:
Q  166 acgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    |||||||| ||||||||||||||| | |||||||  ||||||| ||||||||| ||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 16111750 - 16111795
Alignment:
Q  160 tccgacacgacaccaacacatataattacactaaattatggaattt 205  Q
    |||||||||||||  |||| |||||||||||||||||||| |||||    
T  16111750 tccgacacgacactgacacctataattacactaaattatgtaattt 16111795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 21924935 - 21924996
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||| ||||||||||||||||| ||||||   || |||| ||||||||||| |||||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcgg 21924996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 9024165 - 9024225
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattat 216  Q
    |||||||||||||||||  |||||||| |||||| | |||||||  ||||||| |||||||    
T  9024165 cgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 9107364 - 9107436
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||| | |||||||||| |||| ||  ||||| | ||||||||||| ||||||| ||||    
T  9107364 ccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 9107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 10294169 - 10294105
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| ||||||||||||||| | || ||||  ||| ||| |||||||||||||| ||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcgg 10294105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 16488584 - 16488656
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||||||||||||  ||| ||  ||||||| |||  |||||| ||||||| ||||    
T  16488584 ccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt 16488656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 18367901 - 18367829
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||||||||||||  ||| ||  ||||||| |||  |||||| ||||||| ||||    
T  18367901 ccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt 18367829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 19147910 - 19147842
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||| ||||||||||| |||||||||||||| || |  |||   ||||||||||||||||| |||||||    
T  19147910 tgtcggacacgacaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtc 19147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 44860382 - 44860315
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgt 44860315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 31808128 - 31808070
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgt 31808070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 42832277 - 42832342
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||| |||| |||||||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgt 42832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 34784976 - 34785048
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||| |||  |||||  ||||||||||||    
T  34784976 ccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgt 34785048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 23718082 - 23718019
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| ||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgt 23718019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 24105754 - 24105691
Alignment:
Q  170 caccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| ||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgt 24105691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 21616813 - 21616755
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||| ||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 21616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18622669 - 18622613
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    |||||||||||||||| |||||||||||| |||||||  ||||| ||||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 24894458 - 24894382
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||| |||||||| | ||||| |||| |||||||  ||||| ||||||||||||| ||||||| ||||    
T  24894458 gtgtccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgt 24894382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 21091767 - 21091716
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| || ||||  ||||||||||||||||||||||||||||||||    
T  21091767 taattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgt 21091716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 30527590 - 30527661
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| ||| ||||||||||||||||||||||||   ||||||| ||||||||| | |||| |||||||    
T  30527590 cgacacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgt 30527661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 31018649 - 31018591
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||| |||| |||||||||||||||| |||  ||||||| ||||||||||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 40361755 - 40361805
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||    
T  40361755 gacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 2665897 - 2665946
Alignment:
Q  176 cacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 17087935 - 17088003
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||||||| |||||||||||   ||||||  |||||| ||||||||||| ||||||||||||    
T  17087935 cgacacgacaccaacatatataattacatcgaattatataatttt-ttaaattattaacggtgtcggtgt 17088003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 19574024 - 19573971
Alignment:
Q  180 tataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||| |||||||  ||||||||||||||||| ||||||||| ||||    
T  19574024 tataattacactgaattatgttattttcttaaattattatcggtgtcggcgtgt 19573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 37411252 - 37411305
Alignment:
Q  175 acacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||| ||||| |||||||  ||||||| |||||||||||||||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcgg 37411305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 18276579 - 18276519
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||| ||||| ||||||||||| ||||| |  ||||||| |||||||||||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcgg 18276519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 24975321 - 24975385
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||| || |||||| ||||||| ||||||   ||||||| ||||||||||||||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 22085063 - 22085012
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||| ||||| || ||||||||||||||||  |||||||||||||||||    
T  22085063 cgacaccgacacaaatgattacactaaattatgtcattttcttaaattatta 22085012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 28677958 - 28677907
Alignment:
Q  177 acatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    ||||||||||||||| |||||||  ||||| | |||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 28677907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 29970545 - 29970608
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||| | |||||||| |||||||| || ||||  ||||||| |||||||||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtc 29970608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 31456654 - 31456705
Alignment:
Q  180 tataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||| |||||   |||||||||||||||||||||||||| ||||    
T  31456654 tataattacactgaattacataattttcttaaattattagcggtgtcagtgt 31456705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 35447883 - 35447946
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    |||||||||| ||||| |||| ||| ||| ||||||| ||||||||| ||||||||||| ||||    
T  35447883 gacacgacacaaacacttatagttatactgaattatgtaattttctttaattattagcgatgtc 35447946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 44776669 - 44776594
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||||||||| ||| |||| |||||||| | |||||  |||||| |||||||||  ||||||| ||||    
T  44776669 cgtgtccgacacgacaccgacatatatgattacactgagttatgtcattttcataaattattgtcggtgtccgtgt 44776594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 12668417 - 12668475
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||||||||| |||| |||||||||||| |||||||  ||||| | ||||||||||    
T  12668417 ccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 13204093 - 13204035
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattat 216  Q
    |||||||||||||||  ||||||||| ||| | ||||||||| |||||||| |||||||    
T  13204093 tgtccgacacgacactgacacatatagttatattaaattatgtaattttctcaaattat 13204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 191
Target Start/End: Original strand, 18054797 - 18054827
Alignment:
Q  161 ccgacacgacaccaacacatataattacact 191  Q
    |||||||||||||||||||||||||||||||    
T  18054797 ccgacacgacaccaacacatataattacact 18054827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 2415374 - 2415325
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    ||||||||||||||| ||||||| ||||||  |||||||| |||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 17077007 - 17077075
Alignment:
Q  162 cgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||||||||||||||| ||||||||| |   ||||||  |||||| ||||||||||| ||||||||||||    
T  17077007 cgacacgacaccaacatatataattatatcgaattatataatttt-ttaaattattaacggtgtcggtgt 17077075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 35056933 - 35056896
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattat 198  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  35056933 ccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 39323308 - 39323263
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    |||||||||| ||||||| |||||| | ||||||||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcg 39323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 5367251 - 5367199
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattag 219  Q
    ||||||| ||||||||||||||||| |||||||  |||| || ||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 14996213 - 14996285
Alignment:
Q  157 gtgtccgacacgacaccaacacatataattacactaaattat-ggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| |||||| |||| | |||||||||||||||||  || |||| | ||||||||||| |||||||    
T  14996213 gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcgg 14996285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 17070937 - 17071004
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||||| | |||||||||||   ||||||  |||||| ||||||||||| ||||||||||||    
T  17070937 gacacgacaccaatatatataattacatcgaattatataatttt-ttaaattattaacggtgtcggtgt 17071004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 21782832 - 21782884
Alignment:
Q  181 ataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| |||||||  ||||||| ||||||||||| ||||||| ||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgt 21782884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23921312 - 23921256
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||||| |  |||||||||||| ||||||| |||||||| ||||||||| ||||    
T  23921312 cgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 34691805 - 34691861
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||| ||||||||||||||||| ||||||   ||||| | ||||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 34714217 - 34714273
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggt 223  Q
    ||||||| ||||||||||||||||| ||||||   ||||| | ||||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

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Target: scaffold1528 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 1100 - 1028
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||| ||||  ||||||||| ||||||| ||||||| |||||| | ||||||||||||||||||||||||    
T  1100 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 1028  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 99956 - 99892
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||||||||||||||||||||||| | |||||||  ||||||| ||||||||| ||||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcg 99892  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 28918 - 28843
Alignment:
Q  158 tgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||| ||||| ||||| ||||||||||||||| | |||||||  ||||||||||||||||| ||||||||| ||||    
T  28918 tgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgt 28843  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 44519 - 44584
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtc 226  Q
    ||||||||| ||| ||||||||||||||||| |||||||  ||||||| ||||| |||||||||||    
T  44519 ccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 92851 - 92800
Alignment:
Q  182 taattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||| ||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgt 92800  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 4884 - 4950
Alignment:
Q  168 gacaccaacacatataattacactaaattatg-gaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||||||||| ||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 4950  T

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Target: scaffold0376 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 6377 - 6307
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    |||| |||||||| ||||||||||||||| | ||||||| |||||| | ||||||||||| ||||| ||||    
T  6377 ccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtccgtgt 6307  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 23490 - 23413
Alignment:
Q  156 cgtgtccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||||||||||| |||| |||||||||||| |||||||  ||||| || | |||||| | ||||||| ||||    
T  23490 cgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgt 23413  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 53245 - 53173
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||| |||| |||| |||||||||||| |||||||  ||||||| |||||||| ||||| |||| ||||    
T  53245 ccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgt 53173  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 9744 - 9808
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcgg 228  Q
    |||||||||| ||||||||||||||||| ||||| |  ||||||| |||||||||| || |||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcgg 9808  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 25765 - 25819
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattatta 218  Q
    |||||||||| |||| ||||||||||||||||||||  |||||||  ||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 63831 - 63774
Alignment:
Q  168 gacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    |||||| |||| | ||||| |||| ||||||| |||||||| ||||||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 241656 - 241587
Alignment:
Q  164 acacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    |||||||||| ||||  |||||||||||||||||||  |||||   ||||||||||| ||||||| ||||    
T  241656 acacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgt 241587  T

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Target: scaffold1449 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 1262 - 1329
Alignment:
Q  163 gacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgt 231  Q
    ||||||||||||| | |||||||||||   ||||||  |||||| ||||||||||| ||||||||||||    
T  1262 gacacgacaccaaaatatataattacatcgaattatataatttt-ttaaattattaacggtgtcggtgt 1329  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 7032 - 7092
Alignment:
Q  167 cgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcg 227  Q
    ||||||| |||| | |||||| ||||||||||| |||||| | ||||||||||| ||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

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Target: scaffold0320 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 17038 - 17094
Alignment:
Q  169 acaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||||||||||| | | |||||  ||||||| ||||||||| ||||||    
T  17038 acaccaacacatataattacattgatttatgccattttctcaaattattaacggtgt 17094  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 20237 - 20165
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgtcggtgtgt 233  Q
    ||||||||||||  |||| | |||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||    
T  20237 ccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 20165  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 263366 - 263430
Alignment:
Q  161 ccgacacgacaccaacacatataattacactaaattatggaattttcttaaattattagcggtgt 225  Q
    ||||||||||||  |||| |||||||||||| |||||||   |||||| ||||||||||| ||||    
T  263366 ccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

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