View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5830-14 (Length: 96)
Name: Solexa-NF5830-14
Description: NF5830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5830-14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 85; Significance: 4e-41; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 4e-41
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 52245113 - 52245025
Alignment:
| Q |
8 |
ctaacatgtaacatgattggcttctacgtttaagaatcaacttgaaaagttttaaaatggaatagaataaagaaaagagacagaagatc |
96 |
Q |
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| T |
52245113 |
ctaacatgtaacatgattggcttctacgtttaagaatcaagttgaaaagttttaaaatggaatagaataaagaaaagagacagaagatc |
52245025 |
T |
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