View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5830-8 (Length: 131)

Name: Solexa-NF5830-8
Description: NF5830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5830-8
Solexa-NF5830-8
[»] chr3 (82 HSPs)
chr3 (7-131)||(25576478-25576602)
chr3 (10-131)||(48087441-48087562)
chr3 (7-131)||(34693176-34693300)
chr3 (24-131)||(53826599-53826706)
chr3 (7-131)||(19453115-19453239)
chr3 (7-131)||(24702158-24702282)
chr3 (7-131)||(47065896-47066020)
chr3 (27-131)||(42949926-42950030)
chr3 (7-131)||(13895756-13895880)
chr3 (7-131)||(44835373-44835497)
chr3 (49-131)||(39416876-39416958)
chr3 (7-131)||(42383260-42383384)
chr3 (7-131)||(44927672-44927796)
chr3 (45-131)||(2268420-2268504)
chr3 (24-93)||(11378840-11378909)
chr3 (45-131)||(3494955-3495039)
chr3 (45-131)||(4004013-4004097)
chr3 (7-108)||(25576249-25576349)
chr3 (45-127)||(36135220-36135300)
chr3 (27-131)||(34049936-34050037)
chr3 (27-131)||(49139963-49140064)
chr3 (27-131)||(54390651-54390752)
chr3 (45-131)||(50997597-50997681)
chr3 (45-131)||(2646802-2646886)
chr3 (11-108)||(24701930-24702026)
chr3 (45-108)||(13895528-13895591)
chr3 (27-131)||(46403212-46403313)
chr3 (54-104)||(25887542-25887592)
chr3 (7-104)||(37281914-37282010)
chr3 (10-131)||(43477266-43477386)
chr3 (11-108)||(44835145-44835241)
chr3 (11-108)||(42383516-42383612)
chr3 (45-108)||(34692948-34693011)
chr3 (45-108)||(44927961-44928024)
chr3 (7-108)||(11378635-11378735)
chr3 (45-102)||(19452811-19452868)
chr3 (48-101)||(20375556-20375610)
chr3 (81-131)||(49610698-49610748)
chr3 (56-100)||(6464012-6464057)
chr3 (55-104)||(6754440-6754488)
chr3 (11-108)||(39416605-39416701)
chr3 (74-131)||(49218689-49218746)
chr3 (56-104)||(15637226-15637273)
chr3 (26-108)||(3494688-3494769)
chr3 (55-104)||(6464280-6464328)
chr3 (55-104)||(18440980-18441028)
chr3 (55-104)||(19486054-19486102)
chr3 (55-104)||(20375818-20375866)
chr3 (44-104)||(25887273-25887334)
chr3 (45-104)||(34646929-34646988)
chr3 (10-101)||(36721053-36721143)
chr3 (54-104)||(774274-774322)
chr3 (54-104)||(7246601-7246651)
chr3 (54-104)||(18441249-18441299)
chr3 (54-104)||(19486323-19486373)
chr3 (54-104)||(27187820-27187870)
chr3 (49-104)||(42323316-42323369)
chr3 (26-108)||(50997867-50997948)
chr3 (49-104)||(51013205-51013258)
chr3 (51-104)||(8633027-8633080)
chr3 (51-104)||(41578409-41578462)
chr3 (74-108)||(47066213-47066247)
chr3 (51-104)||(49273907-49273960)
chr3 (81-131)||(51695566-51695616)
chr3 (48-100)||(6754703-6754756)
chr3 (49-98)||(41804147-41804194)
chr3 (49-98)||(52569336-52569383)
chr3 (45-108)||(2268153-2268216)
chr3 (55-103)||(42322995-42323041)
chr3 (55-103)||(46346217-46346263)
chr3 (51-102)||(52569073-52569124)
chr3 (65-104)||(2429006-2429044)
chr3 (26-108)||(4003746-4003827)
chr3 (49-100)||(7954447-7954496)
chr3 (49-104)||(33449082-33449135)
chr3 (26-108)||(34050206-34050287)
chr3 (49-104)||(34472003-34472056)
chr3 (55-106)||(42383613-42383662)
chr3 (49-104)||(43570149-43570202)
chr3 (49-104)||(46346539-46346592)
chr3 (26-108)||(49139713-49139794)
chr3 (26-108)||(54390921-54391002)
[»] chr2 (49 HSPs)
chr2 (7-131)||(12968185-12968309)
chr2 (10-131)||(42120211-42120332)
chr2 (7-131)||(10360083-10360206)
chr2 (7-131)||(22493470-22493594)
chr2 (7-125)||(29906787-29906905)
chr2 (10-131)||(42240985-42241106)
chr2 (7-131)||(18393548-18393673)
chr2 (7-131)||(16582023-16582147)
chr2 (11-100)||(32735102-32735191)
chr2 (7-127)||(32734850-32734970)
chr2 (7-109)||(10359853-10359954)
chr2 (45-131)||(29067928-29068012)
chr2 (7-108)||(42120464-42120564)
chr2 (27-131)||(3936970-3937071)
chr2 (27-131)||(17424988-17425089)
chr2 (9-108)||(22493725-22493823)
chr2 (27-131)||(43983055-43983156)
chr2 (7-131)||(39394090-39394214)
chr2 (55-131)||(5420668-5420742)
chr2 (45-108)||(16582312-16582375)
chr2 (11-105)||(18393805-18393898)
chr2 (81-131)||(3941936-3941986)
chr2 (45-127)||(22002037-22002117)
chr2 (55-104)||(16253680-16253728)
chr2 (45-108)||(8557381-8557444)
chr2 (48-104)||(33404502-33404558)
chr2 (49-104)||(6977065-6977118)
chr2 (49-104)||(18036088-18036143)
chr2 (51-104)||(10364296-10364349)
chr2 (7-131)||(39799754-39799876)
chr2 (49-104)||(16253944-16254000)
chr2 (72-104)||(31991885-31991917)
chr2 (49-104)||(10364562-10364615)
chr2 (49-104)||(17796034-17796087)
chr2 (49-104)||(34521608-34521661)
chr2 (49-104)||(35491864-35491917)
chr2 (49-104)||(43491679-43491732)
chr2 (49-118)||(29111370-29111437)
chr2 (45-108)||(29111601-29111664)
chr2 (51-102)||(35492128-35492179)
chr2 (44-104)||(35492316-35492376)
chr2 (55-103)||(41498696-41498742)
chr2 (51-102)||(43491944-43491995)
chr2 (49-104)||(2919289-2919342)
chr2 (55-106)||(3936669-3936719)
chr2 (54-104)||(8557145-8557195)
chr2 (26-108)||(17425258-17425339)
chr2 (55-106)||(18393902-18393951)
chr2 (55-106)||(22493824-22493873)
[»] chr1 (87 HSPs)
chr1 (7-131)||(46180167-46180291)
chr1 (7-131)||(45689314-45689438)
chr1 (7-131)||(47487924-47488048)
chr1 (11-131)||(35576534-35576654)
chr1 (7-131)||(27035205-27035329)
chr1 (7-131)||(49598778-49598902)
chr1 (7-131)||(50068146-50068270)
chr1 (7-126)||(49262875-49262994)
chr1 (8-131)||(39224085-39224208)
chr1 (9-131)||(42571665-42571787)
chr1 (7-127)||(48568291-48568411)
chr1 (44-131)||(12791197-12791284)
chr1 (7-131)||(41874771-41874895)
chr1 (44-131)||(3658668-3658755)
chr1 (50-131)||(30309762-30309843)
chr1 (11-108)||(27034976-27035073)
chr1 (7-108)||(47487695-47487795)
chr1 (7-106)||(3658920-3659018)
chr1 (45-127)||(19160516-19160596)
chr1 (45-131)||(22527702-22527786)
chr1 (11-108)||(30309491-30309587)
chr1 (11-108)||(51270252-51270348)
chr1 (7-131)||(29707425-29707552)
chr1 (9-108)||(50067917-50068015)
chr1 (11-108)||(29707197-29707293)
chr1 (7-108)||(45689567-45689667)
chr1 (7-108)||(46179938-46180038)
chr1 (11-108)||(49262655-49262751)
chr1 (7-131)||(44337207-44337330)
chr1 (7-131)||(51269997-51270120)
chr1 (79-131)||(27486649-27486701)
chr1 (8-131)||(29436168-29436290)
chr1 (55-131)||(39856843-39856917)
chr1 (7-104)||(12790936-12791032)
chr1 (7-104)||(17697467-17697563)
chr1 (7-104)||(18170473-18170569)
chr1 (49-131)||(21484574-21484654)
chr1 (27-131)||(29762129-29762232)
chr1 (83-131)||(49427582-49427630)
chr1 (29-108)||(41874544-41874622)
chr1 (45-131)||(44597896-44597982)
chr1 (44-104)||(16081766-16081827)
chr1 (44-104)||(18170668-18170728)
chr1 (11-108)||(39223857-39223952)
chr1 (11-108)||(48568064-48568160)
chr1 (83-131)||(13635260-13635308)
chr1 (10-108)||(49598546-49598646)
chr1 (45-104)||(38044612-38044671)
chr1 (55-97)||(16098022-16098063)
chr1 (45-102)||(18842937-18842994)
chr1 (50-104)||(24270292-24270344)
chr1 (47-101)||(42571442-42571496)
chr1 (11-108)||(44336979-44337075)
chr1 (48-104)||(24363475-24363531)
chr1 (45-108)||(21484436-21484499)
chr1 (49-104)||(13973149-13973202)
chr1 (49-104)||(14173686-14173739)
chr1 (49-104)||(14772462-14772517)
chr1 (86-125)||(48226760-48226799)
chr1 (49-104)||(49396929-49396982)
chr1 (51-104)||(17686021-17686074)
chr1 (11-108)||(29436423-29436519)
chr1 (51-104)||(37778569-37778622)
chr1 (48-104)||(12790693-12790749)
chr1 (55-104)||(13283926-13283973)
chr1 (55-100)||(13973481-13973524)
chr1 (48-104)||(17685779-17685835)
chr1 (49-98)||(37778310-37778357)
chr1 (49-98)||(38046362-38046409)
chr1 (49-98)||(41780924-41780971)
chr1 (51-102)||(6436262-6436313)
chr1 (55-103)||(12790879-12790925)
chr1 (48-104)||(13284188-13284244)
chr1 (51-102)||(23343130-23343181)
chr1 (48-104)||(24269786-24269842)
chr1 (55-103)||(38044798-38044844)
chr1 (51-102)||(38044857-38044908)
chr1 (55-103)||(40532892-40532938)
chr1 (49-104)||(6435997-6436050)
chr1 (26-108)||(19160782-19160863)
chr1 (26-108)||(22527972-22528053)
chr1 (49-104)||(23342866-23342919)
chr1 (49-104)||(36909786-36909839)
chr1 (55-102)||(41781221-41781267)
chr1 (55-106)||(45689668-45689717)
chr1 (55-106)||(46179888-46179937)
chr1 (55-106)||(50067867-50067916)
[»] chr8 (46 HSPs)
chr8 (8-131)||(33799437-33799560)
chr8 (7-127)||(28706027-28706147)
chr8 (7-131)||(42168845-42168969)
chr8 (9-124)||(34615165-34615280)
chr8 (7-131)||(38033810-38033934)
chr8 (7-131)||(43693342-43693466)
chr8 (7-131)||(43638562-43638686)
chr8 (7-131)||(40415462-40415586)
chr8 (7-117)||(40414827-40414937)
chr8 (45-131)||(15032249-15032333)
chr8 (7-131)||(22549284-22549407)
chr8 (7-131)||(24861548-24861671)
chr8 (27-131)||(485166-485267)
chr8 (7-131)||(2417120-2417242)
chr8 (45-104)||(31171740-31171799)
chr8 (7-101)||(28705805-28705898)
chr8 (7-108)||(42168616-42168716)
chr8 (83-131)||(41363861-41363909)
chr8 (45-108)||(40415751-40415814)
chr8 (48-108)||(22549575-22549635)
chr8 (7-131)||(26452530-26452653)
chr8 (45-100)||(3589188-3589245)
chr8 (81-131)||(41275599-41275649)
chr8 (45-108)||(38033582-38033645)
chr8 (49-104)||(19242088-19242141)
chr8 (49-104)||(19315272-19315325)
chr8 (47-104)||(16576152-16576209)
chr8 (74-108)||(24861865-24861899)
chr8 (51-104)||(28167338-28167391)
chr8 (48-98)||(42603695-42603743)
chr8 (11-108)||(44050900-44050996)
chr8 (11-96)||(40415069-40415153)
chr8 (49-98)||(40702602-40702649)
chr8 (49-98)||(41856900-41856947)
chr8 (49-104)||(31171479-31171535)
chr8 (51-102)||(41856635-41856686)
chr8 (51-102)||(42603951-42604002)
chr8 (26-108)||(484916-484997)
chr8 (55-106)||(2417530-2417579)
chr8 (49-104)||(16575912-16575965)
chr8 (49-104)||(16576216-16576269)
chr8 (55-106)||(28705748-28705797)
chr8 (55-106)||(38033532-38033581)
chr8 (45-104)||(41856391-41856450)
chr8 (49-104)||(43637186-43637241)
chr8 (55-106)||(43637371-43637420)
[»] chr4 (83 HSPs)
chr4 (7-131)||(45939720-45939845)
chr4 (7-131)||(27759522-27759646)
chr4 (7-131)||(31824517-31824641)
chr4 (7-131)||(51027655-51027779)
chr4 (7-131)||(21711725-21711849)
chr4 (7-131)||(25762793-25762917)
chr4 (10-131)||(49064174-49064295)
chr4 (7-131)||(51428080-51428204)
chr4 (5-131)||(37866602-37866728)
chr4 (10-131)||(46816416-46816537)
chr4 (7-131)||(33163432-33163556)
chr4 (44-131)||(1226354-1226441)
chr4 (49-131)||(20901598-20901680)
chr4 (7-131)||(14330584-14330706)
chr4 (49-131)||(242346-242428)
chr4 (7-108)||(20901335-20901435)
chr4 (27-131)||(55796938-55797039)
chr4 (45-131)||(21017105-21017189)
chr4 (7-108)||(27759775-27759875)
chr4 (45-127)||(40353701-40353781)
chr4 (7-131)||(9489873-9489996)
chr4 (11-108)||(38132779-38132875)
chr4 (27-131)||(6177226-6177327)
chr4 (45-100)||(17211773-17211829)
chr4 (27-131)||(41794473-41794574)
chr4 (27-131)||(49094940-49095041)
chr4 (11-102)||(51427858-51427948)
chr4 (27-131)||(56139105-56139206)
chr4 (11-108)||(21711981-21712077)
chr4 (7-108)||(25763046-25763146)
chr4 (49-131)||(32937834-32937914)
chr4 (11-108)||(39589379-39589475)
chr4 (7-108)||(45939973-45940073)
chr4 (7-131)||(1042944-1043067)
chr4 (7-104)||(14330358-14330454)
chr4 (55-104)||(18412816-18412864)
chr4 (7-131)||(28082433-28082555)
chr4 (7-131)||(39589124-39589247)
chr4 (49-104)||(31324395-31324450)
chr4 (49-104)||(43889428-43889481)
chr4 (45-131)||(20778796-20778881)
chr4 (55-104)||(17211488-17211536)
chr4 (44-104)||(18413073-18413134)
chr4 (48-104)||(49817307-49817363)
chr4 (45-108)||(37866891-37866954)
chr4 (29-108)||(46816184-46816262)
chr4 (49-104)||(21169676-21169729)
chr4 (9-100)||(242105-242194)
chr4 (63-100)||(21411842-21411879)
chr4 (48-104)||(42886753-42886809)
chr4 (51-102)||(26591581-26591632)
chr4 (55-103)||(49423364-49423410)
chr4 (65-100)||(21411566-21411601)
chr4 (49-104)||(36776448-36776501)
chr4 (49-104)||(44560109-44560162)
chr4 (7-97)||(51027437-51027526)
chr4 (26-108)||(56139375-56139456)
chr4 (74-108)||(885320-885354)
chr4 (49-98)||(22437142-22437189)
chr4 (11-104)||(49064431-49064523)
chr4 (45-97)||(13855022-13855075)
chr4 (49-106)||(24606972-24607027)
chr4 (44-104)||(24607211-24607271)
chr4 (45-97)||(31324703-31324756)
chr4 (7-91)||(31824305-31824388)
chr4 (48-101)||(49817572-49817623)
chr4 (55-103)||(2773563-2773609)
chr4 (72-100)||(9717840-9717868)
chr4 (51-102)||(22437401-22437452)
chr4 (55-103)||(34529403-34529449)
chr4 (51-102)||(49791602-49791653)
chr4 (49-104)||(957384-957437)
chr4 (26-108)||(6176976-6177057)
chr4 (73-104)||(17292183-17292214)
chr4 (26-108)||(21016838-21016919)
chr4 (14-108)||(28082690-28082783)
chr4 (45-108)||(32937585-32937648)
chr4 (49-104)||(34153215-34153268)
chr4 (55-106)||(46816134-46816183)
chr4 (26-108)||(49095210-49095291)
chr4 (49-104)||(49423686-49423740)
chr4 (45-104)||(51027241-51027299)
chr4 (55-106)||(51027376-51027425)
[»] chr5 (59 HSPs)
chr5 (7-130)||(19400558-19400681)
chr5 (7-131)||(3601535-3601659)
chr5 (7-131)||(3458984-3459108)
chr5 (7-108)||(40011834-40011935)
chr5 (7-126)||(1971564-1971683)
chr5 (49-131)||(7082415-7082497)
chr5 (11-108)||(3169984-3170080)
chr5 (7-108)||(19400810-19400910)
chr5 (27-131)||(7141-7242)
chr5 (27-127)||(8576053-8576150)
chr5 (7-94)||(3169766-3169853)
chr5 (45-127)||(27661306-27661386)
chr5 (45-131)||(28881185-28881269)
chr5 (7-108)||(40012064-40012163)
chr5 (7-108)||(1971812-1971912)
chr5 (7-108)||(3601788-3601888)
chr5 (45-130)||(22283766-22283849)
chr5 (27-131)||(19036586-19036687)
chr5 (10-108)||(3459240-3459337)
chr5 (7-131)||(8538148-8538270)
chr5 (7-131)||(11346903-11347025)
chr5 (44-100)||(12743168-12743225)
chr5 (55-131)||(11027971-11028045)
chr5 (45-100)||(12805987-12806043)
chr5 (83-131)||(30709792-30709840)
chr5 (54-100)||(12806332-12806379)
chr5 (81-131)||(541598-541648)
chr5 (54-100)||(12743511-12743558)
chr5 (11-104)||(7082671-7082763)
chr5 (45-102)||(10398273-10398330)
chr5 (49-98)||(4724004-4724051)
chr5 (55-104)||(12742909-12742957)
chr5 (44-104)||(36311871-36311932)
chr5 (44-104)||(18308742-18308801)
chr5 (45-108)||(33371112-33371175)
chr5 (49-104)||(18308484-18308537)
chr5 (74-104)||(13131035-13131065)
chr5 (51-104)||(36349990-36350043)
chr5 (48-104)||(1695519-1695575)
chr5 (45-93)||(2599483-2599532)
chr5 (55-104)||(12805727-12805775)
chr5 (48-104)||(35566000-35566056)
chr5 (48-104)||(36349745-36349801)
chr5 (49-104)||(1400232-1400285)
chr5 (55-103)||(4723682-4723728)
chr5 (11-102)||(11347157-11347247)
chr5 (72-104)||(17195314-17195346)
chr5 (26-108)||(6891-6972)
chr5 (49-104)||(1695013-1695066)
chr5 (54-104)||(1695282-1695332)
chr5 (55-106)||(3459338-3459387)
chr5 (26-108)||(8575803-8575884)
chr5 (48-102)||(17366398-17366452)
chr5 (51-106)||(19036282-19036335)
chr5 (26-108)||(19036336-19036417)
chr5 (55-106)||(19400911-19400960)
chr5 (51-106)||(22284116-22284169)
chr5 (51-106)||(28881536-28881589)
chr5 (45-72)||(36350251-36350278)
[»] scaffold0589 (2 HSPs)
scaffold0589 (7-131)||(2464-2588)
scaffold0589 (79-108)||(4805-4834)
[»] chr7 (60 HSPs)
chr7 (7-131)||(47269095-47269219)
chr7 (7-131)||(18237761-18237885)
chr7 (7-131)||(48220630-48220754)
chr7 (24-131)||(2205940-2206047)
chr7 (7-130)||(17183413-17183536)
chr7 (12-131)||(28978943-28979062)
chr7 (7-131)||(34141062-34141185)
chr7 (7-131)||(39477126-39477250)
chr7 (49-131)||(26601706-26601788)
chr7 (50-131)||(41217811-41217892)
chr7 (45-131)||(13920503-13920587)
chr7 (7-131)||(30360713-30360835)
chr7 (7-107)||(30360965-30361064)
chr7 (7-108)||(18238014-18238114)
chr7 (7-108)||(48220402-48220502)
chr7 (27-131)||(9367029-9367130)
chr7 (27-130)||(10523267-10523367)
chr7 (55-130)||(17320137-17320210)
chr7 (7-108)||(17183665-17183765)
chr7 (7-131)||(45363139-45363262)
chr7 (27-131)||(20564956-20565057)
chr7 (7-131)||(17839521-17839643)
chr7 (27-131)||(40588746-40588849)
chr7 (83-131)||(34139363-34139411)
chr7 (7-108)||(34141314-34141414)
chr7 (47-108)||(28978873-28978934)
chr7 (11-108)||(41218066-41218162)
chr7 (49-104)||(2356513-2356566)
chr7 (55-131)||(20378639-20378713)
chr7 (45-108)||(26601436-26601499)
chr7 (51-104)||(48271140-48271193)
chr7 (48-100)||(1642257-1642310)
chr7 (48-104)||(15337567-15337623)
chr7 (44-97)||(4230291-4230346)
chr7 (52-106)||(48270873-48270925)
chr7 (55-104)||(1642525-1642571)
chr7 (51-104)||(10224559-10224612)
chr7 (51-104)||(20877714-20877767)
chr7 (51-104)||(21186961-21187014)
chr7 (51-104)||(21651015-21651068)
chr7 (48-104)||(20877471-20877527)
chr7 (55-104)||(21614393-21614440)
chr7 (48-104)||(28113813-28113869)
chr7 (72-104)||(3380626-3380658)
chr7 (45-104)||(21614447-21614506)
chr7 (55-103)||(28113998-28114044)
chr7 (45-104)||(28114055-28114114)
chr7 (48-104)||(30361245-30361301)
chr7 (45-104)||(42683139-42683198)
chr7 (55-106)||(9366728-9366778)
chr7 (26-108)||(9366779-9366860)
chr7 (49-100)||(15337832-15337881)
chr7 (26-108)||(20565226-20565307)
chr7 (51-106)||(20565308-20565361)
chr7 (55-106)||(26601386-26601435)
chr7 (49-104)||(36393751-36393804)
chr7 (55-106)||(39476849-39476898)
chr7 (49-104)||(41049010-41049063)
chr7 (49-104)||(42735489-42735542)
chr7 (49-104)||(43351027-43351080)
[»] scaffold0176 (2 HSPs)
scaffold0176 (7-131)||(1987-2110)
scaffold0176 (7-108)||(2239-2339)
[»] scaffold0192 (2 HSPs)
scaffold0192 (7-131)||(17803-17927)
scaffold0192 (11-102)||(17581-17671)
[»] chr6 (36 HSPs)
chr6 (7-131)||(3765673-3765797)
chr6 (7-131)||(35058621-35058745)
chr6 (45-130)||(24021023-24021106)
chr6 (7-131)||(801364-801486)
chr6 (45-130)||(2192597-2192680)
chr6 (27-131)||(27640379-27640480)
chr6 (27-131)||(6205683-6205784)
chr6 (45-101)||(34134879-34134935)
chr6 (45-131)||(11692650-11692734)
chr6 (7-131)||(29066752-29066875)
chr6 (7-131)||(29075765-29075888)
chr6 (7-131)||(29108339-29108462)
chr6 (7-131)||(29110737-29110860)
chr6 (45-108)||(35058393-35058456)
chr6 (49-104)||(30257506-30257559)
chr6 (11-104)||(801618-801710)
chr6 (43-104)||(20192543-20192605)
chr6 (43-104)||(20242049-20242111)
chr6 (43-104)||(22136033-22136095)
chr6 (43-104)||(22143386-22143448)
chr6 (51-102)||(12397270-12397321)
chr6 (45-104)||(14482746-14482806)
chr6 (72-104)||(17465287-17465319)
chr6 (26-108)||(6205953-6206034)
chr6 (49-104)||(13402762-13402815)
chr6 (51-100)||(4495397-4495446)
chr6 (55-104)||(13403313-13403362)
chr6 (55-108)||(14123099-14123152)
chr6 (54-104)||(14123421-14123470)
chr6 (11-108)||(29067007-29067103)
chr6 (11-108)||(29108594-29108690)
chr6 (48-104)||(4495615-4495671)
chr6 (51-104)||(14115262-14115313)
chr6 (26-108)||(11692920-11693001)
chr6 (45-108)||(27640667-27640729)
chr6 (49-104)||(32027555-32027608)
[»] scaffold0861 (2 HSPs)
scaffold0861 (7-108)||(2403-2503)
scaffold0861 (49-82)||(2200-2233)
[»] scaffold0031 (1 HSPs)
scaffold0031 (45-130)||(85524-85607)
[»] scaffold0268 (1 HSPs)
scaffold0268 (45-131)||(14665-14749)
[»] scaffold0004 (1 HSPs)
scaffold0004 (49-131)||(64146-64226)
[»] scaffold0859 (1 HSPs)
scaffold0859 (70-100)||(1169-1199)
[»] scaffold1700 (2 HSPs)
scaffold1700 (7-74)||(47-114)
scaffold1700 (54-106)||(384-436)


Alignment Details
Target: chr3 (Bit Score: 97; Significance: 4e-48; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 25576478 - 25576602
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25576478 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 25576577  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  25576578 caccttaccctaaataatgacgatc 25576602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 48087441 - 48087562
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 109  Q
    ||||||||||| | || ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48087441 aaaaacatgaatgctgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaatgcac 48087540  T
Q  110 cttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||||||    
T  48087541 cttaccctaattaatgacgatc 48087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 34693176 - 34693300
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34693176 aggaaaaacatgaatgtcgcgcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatg 34693275  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  34693276 caccttaccctaactaatgacgatc 34693300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 53826599 - 53826706
Alignment:
Q  24 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 123  Q
    |||||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  53826599 tgggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaa 53826698  T
Q  124 tgacgatc 131  Q
    ||||||||    
T  53826699 tgacgatc 53826706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 19453115 - 19453239
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || | ||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19453115 aggaaaaacatgaatgtcgagcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatg 19453214  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||| ||||    
T  19453215 caccttaccctaactaatgatgatc 19453239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 24702158 - 24702282
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24702158 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatg 24702257  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  24702258 caccttaccctaactaatgacgatc 24702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 47066020 - 47065896
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||| ||||||| ||| ||||||||| || | || |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47066020 aggaaaaatatgaacgctggacgaaatgctcgagttatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatg 47065921  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  47065920 caccttaccctaactaatgacgatc 47065896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 42949926 - 42950030
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  42949926 gcgaaatgcttgagtcctaggcgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 42950025  T
Q  127 cgatc 131  Q
    |||||    
T  42950026 cgatc 42950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 13895756 - 13895880
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13895756 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatg 13895855  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||| ||| |||||||||||    
T  13895856 caccttaccttaactaatgacgatc 13895880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 44835373 - 44835497
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||| ||||||| || | |  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44835373 aggaaaaacatgaatgccgagcgaagtgcttgagtcctggccgtttgacaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaatg 44835472  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  44835473 caccttaccctaactaatgacgatc 44835497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 39416876 - 39416958
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39416876 gtttggcaagtttgaattatcccattttagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 39416958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 42383384 - 42383260
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | | |||||| |||| |||| |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42383384 aggaaaaacatgaatgccgagtgaaatgtttgagtcatggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaatg 42383285  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||  || || |||||||||||    
T  42383284 caccttgtcccaactaatgacgatc 42383260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 44927796 - 44927672
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || |    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  44927796 aggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccattttttaggtaagacaattgttgcagttggaatg 44927697  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  44927696 caccttaccctaactaatgacgatc 44927672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 2268420 - 2268504
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  2268420 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 2268504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 11378840 - 11378909
Alignment:
Q  24 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgt 93  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||    
T  11378840 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgt 11378909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 3494955 - 3495039
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3494955 tgttgtttgaaaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 3495039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 4004013 - 4004097
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  4004013 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttactctaactaatgacgatc 4004097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 25576349 - 25576249
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||||   ||||||||||||||| || | |||||||||| |||||||||| |||||||| || |||||||||||||||||||||||||||    
T  25576349 aggaaaaacatgaacacggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaat 25576252  T
Q  106 gca 108  Q
    |||    
T  25576251 gca 25576249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 36135300 - 36135220
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgac 127  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  36135300 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttactctaactaatgac 36135220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 34050037 - 34049936
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  34050037 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 34049941  T
Q  127 cgatc 131  Q
    |||||    
T  34049940 cgatc 34049936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 49139963 - 49140064
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  49139963 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 49140059  T
Q  127 cgatc 131  Q
    |||||    
T  49140060 cgatc 49140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 54390752 - 54390651
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  54390752 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 54390656  T
Q  127 cgatc 131  Q
    |||||    
T  54390655 cgatc 54390651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 50997681 - 50997597
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| ||||||||||||||||||||  | ||  || ||||||||||||||||||||||| |||||||||| |||||||||||    
T  50997681 tgttgtttgacaagtttgaattaccccattcaaaag--aatacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 50997597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 2646802 - 2646886
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| || ||||||||||||||||| || | | |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  2646802 tgttgtttgacaggtttgaattaccccatt-caaatg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 2646886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 24702026 - 24701930
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  24702026 aaaacatgaatgccgggtgaaatgcttgagtcag-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 24701930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 13895591 - 13895528
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  13895591 tgttgtttggcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 13895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 46403313 - 46403212
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  46403313 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 46403217  T
Q  127 cgatc 131  Q
    |||||    
T  46403216 cgatc 46403212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 25887542 - 25887592
Alignment:
Q  54 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  25887542 gcaagtttgaattatcccatttcataggtaagacaattgttgtagttggaa 25887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 37281914 - 37282010
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  37281914 aggaaaaacatgaatgccgggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 37282010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 43477386 - 43477266
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||| |  | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || |||||||||| |||||| ||||||||||||    
T  43477386 aaaaacatgaatgccgagcgaaatgcttgactcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacagttgttgaagttggaatgca 43477289  T
Q  109 tcttaccctaattaatgacgatc 131  Q
      |||||||||||||||||||||    
T  43477288 cattaccctaattaatgacgatc 43477266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 44835241 - 44835145
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  |||||||||| |||| || | ||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  44835241 aaaacatgaatgccgggcgaaatgtttgagtcct-gttgtttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 44835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 42383516 - 42383612
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| || | |||||||||||||||||||||   ||| |||| || |||||||||||||||||||||||||||    
T  42383516 aaaacatgaatgccgggtgaaatgcttgagtcct-gttgtttggcaagtttgaatttatccaattcaaagataagacaattgttgtagttggaatgca 42383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 34693011 - 34692948
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||    
T  34693011 tgttgtttggcaagtttgaattgaccccatt-cacaggtaagacaattgttggagttggaatgca 34692948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 44927961 - 44928024
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||| |||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  44927961 tgttgcttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 44928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 11378735 - 11378635
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||||    
T  11378735 aggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggcaagacaattgttggagttggaat 11378638  T
Q  106 gca 108  Q
    |||    
T  11378637 gca 11378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 19452868 - 19452811
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  19452868 tgttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 19452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 20375610 - 20375556
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 101  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20375610 tgtttagcaagtttgaatttaccccatttcagaggtaagacaattattgtagttg 20375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 49610748 - 49610698
Alignment:
Q  81 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  49610748 gtaagacaattgttgcagttggaatgcaccttaccctaactaatgacgatc 49610698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 6464057 - 6464012
Alignment:
Q  56 aagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6464057 aagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 6464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 6754488 - 6754440
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  6754488 caagtttgaattaccccatttcaga-gtaagacagttgttgtagttggaa 6754440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 39416701 - 39416605
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| |||||| |||| |||| ||||||||| |||||||||||  |||  |||| |||||||| |||||||||||||||||||||    
T  39416701 aaaacatgaatgcggggtgaaatgtttgagtcat-gttgtttgggaagtttgaatttgccccattcaaaggtaagataattgttgtagttggaatgca 39416605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 49218689 - 49218746
Alignment:
Q  74 ttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||| ||||||||||||||||| ||||||||||||  ||||||||| |||||||||||    
T  49218689 ttcaaaggtaagacaattgttgcagttggaatgcactttaccctaactaatgacgatc 49218746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 15637273 - 15637226
Alignment:
Q  56 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15637273 aagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 15637226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 3494769 - 3494688
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| |||| ||||||| ||||||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  3494769 ggcgaaatgcttgagtcat-gttgttttgcaagtttgaatttatcccatt-caaaggtaacacaattgttgttgttggaatgca 3494688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 6464280 - 6464328
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  6464280 caagtttgaattaccccatttcaga-gtaagagagttgttgtagttggaa 6464328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 18441028 - 18440980
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  18441028 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaa 18440980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 19486102 - 19486054
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  19486102 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaa 19486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 20375818 - 20375866
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  20375818 caagtttgaattaacccatttcaga-gtaagacaatttttgtagttggaa 20375866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 25887334 - 25887273
Alignment:
Q  44 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||| ||||||||||||| ||| ||||||| |||||||| |||||||||||||||||    
T  25887334 ttgtcgtttagcaagtttgaatttacctcatttcaaaggtaagataattgttgtagttggaa 25887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 34646988 - 34646929
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  34646988 tgttgtttgacaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 34646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 36721143 - 36721053
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 101  Q
    ||||||||||| || ||||||||||||||| || | |||||||||  || ||||||| ||| |||| || |||||||||||||||||||||||    
T  36721143 aaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttgggcagattgaatttacctcatt-caaaggtaagacaattgttgtagttg 36721053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 774274 - 774322
Alignment:
Q  54 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| ||  |||||||||||||||||||||||| ||||||||    
T  774274 gcaagtttgaatttcc--atttcagaggtaagacaattgttgcagttggaa 774322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 7246601 - 7246651
Alignment:
Q  54 gcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  7246601 gcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 7246651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 18441249 - 18441299
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  18441249 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 18441299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 19486323 - 19486373
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  19486323 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 19486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 27187820 - 27187870
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  27187820 gcaagtttgaatttacctcatt-cagaggtaagacaattgttgtagttggaa 27187870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 42323316 - 42323369
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  42323316 gtttgccaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 42323369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 50997867 - 50997948
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || ||||||||||||||||| ||||||||||||    
T  50997867 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgttggagttggaatgca 50997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 51013205 - 51013258
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  51013205 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 51013258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 8633080 - 8633027
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  8633080 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 8633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 41578409 - 41578462
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  41578409 ttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaa 41578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 47066213 - 47066247
Alignment:
Q  74 ttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||| ||||||||||||||||||||||||||||||    
T  47066213 ttcaaaggtaagacaattgttgtagttggaatgca 47066247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 49273907 - 49273960
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  49273907 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 49273960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 51695566 - 51695616
Alignment:
Q  81 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||| ||||    
T  51695566 gtaagacaattattgcagttggaatgcaccttaccctaactaatgatgatc 51695616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 6754703 - 6754756
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||| ||||| ||||||| ||| |||||| |||||||||||||||||||||||    
T  6754703 tgtttagcaagattgaatttaccacatttcggaggtaagacaattgttgtagtt 6754756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 41804194 - 41804147
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41804194 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41804147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 52569336 - 52569383
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  52569336 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 52569383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 2268216 - 2268153
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||| ||| ||||||||| | |||||| || ||||||||||||||| ||||||||||||||    
T  2268216 tgttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgtcgtagttggaatgca 2268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 42322995 - 42323041
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  42322995 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 42323041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 46346217 - 46346263
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  46346217 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 46346263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 52569124 - 52569073
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  52569124 ttggcaagtttgaatttacctcatt-cacaggtaagacaattgttgtagttgg 52569073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 2429006 - 2429044
Alignment:
Q  65 ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  2429006 ttaccccatt-caaaggtaagacaattgttgtagttggaa 2429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 4003827 - 4003746
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| |||| |||||||| || |||||||| || | |||| || |||||| |||||||||| ||||||||||||    
T  4003827 ggcgaaatgcttgagtcat-gttgtttgacaggtttgaatctatctcatt-caaaggtaacacaattgttggagttggaatgca 4003746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 7954496 - 7954447
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  7954496 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagtt 7954447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 33449082 - 33449135
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||||||| | |||||| || |||||||||||||||||||    
T  33449082 gtttgacaagtttgaattacccca-tccagagg-aaaacaattgttgtagttggaa 33449135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 34050206 - 34050287
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  34050206 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 34050287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 34472003 - 34472056
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| |||||    
T  34472003 gtttggcaagtttgaattacccca-ttcaaagg-aagacaatttttgtagctggaa 34472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 42383662 - 42383613
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  42383662 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 42383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 43570202 - 43570149
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  43570202 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 43570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 46346539 - 46346592
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||    
T  46346539 gtttggcaagtttgaatta-cccaattcaaagg-aagacaattgttgtagctggaa 46346592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 49139794 - 49139713
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  49139794 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 49139713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 54390921 - 54391002
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  54390921 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 54391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 4e-48; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 12968185 - 12968309
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12968185 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggagtg 12968284  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  12968285 caccttaccctaactaatgacgatc 12968309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 42120332 - 42120211
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 109  Q
    ||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  42120332 aaaaacatgaacgctgggcgaaatgcttgattcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaatcgttgtagttggaatgcac 42120233  T
Q  110 cttaccctaattaatgacgatc 131  Q
    |||||||||| |||||||||||    
T  42120232 cttaccctaactaatgacgatc 42120211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 10360083 - 10360206
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10360083 aggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccattt-tgaggtaagacaattgttgtagttggaatg 10360181  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  10360182 caccttaccctaactaatgacgatc 10360206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 22493594 - 22493470
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||| ||| |||| |  ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22493594 aggaaaaacatgaacgctgggcgaaatgcctgagtcatggccgtttggcaagtttgaattaccccatttcagaagtaagacagttgttgtagttggaatg 22493495  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    ||||||||||||| |||||||||||    
T  22493494 catcttaccctaactaatgacgatc 22493470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 29906905 - 29906787
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29906905 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacagttgttgtagttggaatg 29906806  T
Q  107 catcttaccctaattaatg 125  Q
    || |||||||||| |||||    
T  29906805 caccttaccctaactaatg 29906787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 42240985 - 42241106
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 109  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  42240985 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcac 42241084  T
Q  110 cttaccctaattaatgacgatc 131  Q
    |||||||||| |||||||||||    
T  42241085 cttaccctaactaatgacgatc 42241106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 18393673 - 18393548
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattacccc-atttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||| ||||| || | || ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18393673 aggaaaaacatgaatgccgagcgaaatacttgagtcctagtcgtttggcaagtttgaattaccccnatttcagaggtaagacaatttttgtagttggaat 18393574  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||| | |||||||||||    
T  18393573 gcaccttaccctcactaatgacgatc 18393548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 16582147 - 16582023
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||| ||||| || | |  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16582147 aggaaaaacatgaatgccgagcgaaatacttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagccaattgttgcagttggaatg 16582048  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||| ||||    
T  16582047 caccttaccctaactaatgaagatc 16582023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 32735102 - 32735191
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32735102 aaaacatgaatgtcgggggaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 32735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 32734970 - 32734850
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||    
T  32734970 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattatcccattttagaggtaagactgttgttgtagttggaatg 32734871  T
Q  107 catcttaccctaattaatgac 127  Q
    || |||||| ||| |||||||    
T  32734870 caccttaccttaactaatgac 32734850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 10359954 - 10359853
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  |||| |||||||||| |||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  10359954 aggaaaaacatgaatgcggggcaaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaat 10359857  T
Q  106 gcat 109  Q
    ||||    
T  10359856 gcat 10359853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 29068012 - 29067928
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  29068012 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaatgcaccttaccctaactaatgacgatc 29067928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 42120464 - 42120564
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  ||| | ||||||||| |||| |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||    
T  42120464 aggaaaaacatgaatgcggggtgcaatgcttgagtcat-gttgtttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaatg 42120562  T
Q  107 ca 108  Q
    ||    
T  42120563 ca 42120564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 3936970 - 3937071
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  3936970 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 3937066  T
Q  127 cgatc 131  Q
    |||||    
T  3937067 cgatc 3937071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 17425089 - 17424988
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  17425089 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 17424993  T
Q  127 cgatc 131  Q
    |||||    
T  17424992 cgatc 17424988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 22493725 - 22493823
Alignment:
Q  9 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgt-ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 107  Q
    |||||||||||| |  ||||||||||||||| |||| ||||| ||||||||||||||||  |||||| || |||||||||||||||||||||||||||||    
T  22493725 gaaaaacatgaatgcggggcgaaatgcttgagtcat-gttgtgttggcaagtttgaattttcccatt-caaaggtaagacaattgttgtagttggaatgc 22493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 43983156 - 43983055
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  43983156 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 43983060  T
Q  127 cgatc 131  Q
    |||||    
T  43983059 cgatc 43983055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 39394214 - 39394090
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaa-tgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| | || |||||| ||||||| |||| |||||||| || ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  39394214 aggaaaaacatgaatgctgagcgaaaatgcttgagtcat-gttgtttgacatgtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaa 39394117  T
Q  105 tgcatcttaccctaattaatgacgatc 131  Q
    |||| |||| ||||| |||||||||||    
T  39394116 tgcaccttatcctaactaatgacgatc 39394090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 5420742 - 5420668
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||| ||||||  ||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  5420742 caagtttgaattgccccatc-cagag-taagacaattgttgcagttggaatgcaccttaccctaactaatgacgatc 5420668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 16582312 - 16582375
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||    
T  16582312 tgttgtttggcaagtttgaactgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 16582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 18393805 - 18393898
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||| |  ||| ||||||||||| || | |||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  18393805 aaaacatgaatgccgggggaaatgcttgagtcct-gttgtttgacaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 18393898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 3941986 - 3941936
Alignment:
Q  81 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  3941986 gtaagacaattgttgaagttggaatgcaccttaccctaactaatgacgatc 3941936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 22002117 - 22002037
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgac 127  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||  ||| |||||||    
T  22002117 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaacttacaataactaatgac 22002037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 16253728 - 16253680
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16253728 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 16253680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 8557444 - 8557381
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||| ||||||||| | |||||| || ||||||||||||||||||||||||||||||    
T  8557444 tgttgtttggcaggtttgaatttatcccatt-caaaggtaagacaattgttgtagttggaatgca 8557381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 33404502 - 33404558
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||| ||||||    
T  33404502 tgtttagcaagtttgaatttacccaattcagaggtaagacaattgttgtatttggaa 33404558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 6977118 - 6977065
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  6977118 gtttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 6977065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 18036088 - 18036143
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||||||| || || | ||||||||||||||||||||||||||||||||||    
T  18036088 gtttagcaagtttaaaatatctcatttcagaggtaagacaattgttgtagttggaa 18036143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 10364349 - 10364296
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||  |||  |||| ||||||||||||||||||||||||||    
T  10364349 ttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaa 10364296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 39799754 - 39799876
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||| ||||||||    
T  39799754 aggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtggttggaat 39799850  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    |||  ||||||||| |||||||||||    
T  39799851 gcacattaccctaactaatgacgatc 39799876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 16253944 - 16254000
Alignment:
Q  49 gtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||| ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  16253944 gtttagcaggtttgaatttaccccatttcagatataagacaattgttgtagttggaa 16254000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 31991885 - 31991917
Alignment:
Q  72 atttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||||||||||||    
T  31991885 atttcagaggtaagacaattgttgtagttggaa 31991917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 10364562 - 10364615
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||    
T  10364562 gtttggcaagtttgaattaccccattt-aaagg-aagacaattgttgtagctggaa 10364615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 17796034 - 17796087
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||    
T  17796034 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagttggaa 17796087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 34521608 - 34521661
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  34521608 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 34521661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 35491917 - 35491864
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  35491917 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 35491864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 43491732 - 43491679
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||    
T  43491732 gtttggcaagtttgaattacccca-ttcaaagg-aaggcaattgttgtagttggaa 43491679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 29111437 - 29111370
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 118  Q
    ||||| ||||||||||||||| |||| || ||| |||| |||||||||||||||||||||  ||||||||    
T  29111437 gtttgacaagtttgaattaccacatt-caaagg-aagataattgttgtagttggaatgcactttacccta 29111370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 29111601 - 29111664
Alignment:
Q  45 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||| ||||||||||  || ||||| | |||||||| |||||||||||||||||||||    
T  29111601 tgttgtttggcgagtttgaatttgcctcatttaa-aggtaagataattgttgtagttggaatgca 29111664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 35492128 - 35492179
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  35492128 ttggcaagtttgaatttaccacatt-caaaggtaagacaattgttgtagttgg 35492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 35492316 - 35492376
Alignment:
Q  44 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||| |||||||||||||  |||  ||||| ||||||| |||||||| ||||||||    
T  35492316 ttgttgtttagcaagtttgaatttgccccattcagtggtaagataattgttgcagttggaa 35492376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 41498696 - 41498742
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  41498696 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 41498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 43491944 - 43491995
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  43491944 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 43491995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 2919289 - 2919342
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  2919289 gtttggcaagtttgaattaccaca-ttcaaagg-aagacaattgttgtagctggaa 2919342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 3936669 - 3936719
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  3936669 caagtttgaattgccccatcgcag-ggtaagacaattgttgcagttggaatg 3936719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 8557195 - 8557145
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| |||||||| ||| || ||||||||||||||||||||||    
T  8557195 gcaagtttgaatttaccccatt-caggggcaagacaattgttgtagttggaa 8557145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17425258 - 17425339
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  17425258 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 17425339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 18393951 - 18393902
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  18393951 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 18393902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 22493873 - 22493824
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||||||    
T  22493873 caagtttgaattgccccatct-agag-taagacaattgttgtagttggaatg 22493824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 4e-48; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 46180167 - 46180291
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46180167 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 46180266  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  46180267 caccttaccctaactaatgacgatc 46180291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 45689438 - 45689314
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  45689438 aggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattatccaatttcagaggtaagacaattgttgtagttggaatg 45689339  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  45689338 caccttaccctaactaatgacgatc 45689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 47487924 - 47488048
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47487924 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 47488023  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||| ||| |||||||||||    
T  47488024 caccttaccataactaatgacgatc 47488048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 35576654 - 35576534
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatc 110  Q
    |||||||||||| | |||||||||||||| |||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  35576654 aaaacatgaacgctaggcgaaatgcttgagtcatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcacc 35576555  T
Q  111 ttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||    
T  35576554 ttaccctaactaatgacgatc 35576534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 27035205 - 27035329
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || | |||||||| |||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035205 aggaaaaacatgaatgtcgagcgaaatgtttgagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 27035304  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||| ||||| |||||||||||    
T  27035305 caccttatcctaactaatgacgatc 27035329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 49598778 - 49598902
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||| |||| ||||| |||| |  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  49598778 aggaaaaacatgaacgatgggcaaaatccttgagtcatggccgtttggcaagtttgaattacccgatttcagaggtaagacgattgttgtagttggaatg 49598877  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  49598878 caccttaccctaactaatgacgatc 49598902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 50068146 - 50068270
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  50068146 aggaaaaacatgaacgatgggcgaaatgcttgagtcatggccgtttgacaagtttgcattaccccatttcagagctaagacaattgttgtagttggaatg 50068245  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || ||||| |||| |||||||||||    
T  50068246 caccttactctaactaatgacgatc 50068270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 49262875 - 49262994
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||||||||| || |||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49262875 aggaaaaacatgaacgctgggcgaaatgctggagtcatggccgtttggcaagtttgaatcaccccatttcagaggtaagacaattgttgtagttggaatg 49262974  T
Q  107 catcttaccctaattaatga 126  Q
    || |||||| ||| ||||||    
T  49262975 caccttaccataactaatga 49262994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 39224085 - 39224208
Alignment:
Q  8 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 107  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39224085 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 39224184  T
Q  108 atcttaccctaattaatgacgatc 131  Q
    | |||||||||| |||||||||||    
T  39224185 accttaccctaactaatgacgatc 39224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 42571665 - 42571787
Alignment:
Q  9 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||| || | |||||||| |||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42571665 gaaaaacatgaatgtcgagcgaaatgtttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 42571764  T
Q  109 tcttaccctaattaatgacgatc 131  Q
     |||||| ||| |||||||||||    
T  42571765 ccttaccttaagtaatgacgatc 42571787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 48568291 - 48568411
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| | || |||||||||||||||| | |   |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  48568291 aggaaaaacatgaatgctgagcgaaatgcttgaatcctggccatttggcaagtttgagttacccaatttcagaggtaagacaattgttgtagttggaatg 48568390  T
Q  107 catcttaccctaattaatgac 127  Q
    || |||||||||| |||||||    
T  48568391 caccttaccctaactaatgac 48568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 12791197 - 12791284
Alignment:
Q  44 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  12791197 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaatgacgatc 12791284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 41874771 - 41874895
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||| ||| | || || |||||||||| || | |  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41874771 aggaaaaacacgaatgctgagcaaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtttgaatg 41874870  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||| ||||||    
T  41874871 caccttaccctaactaataacgatc 41874895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 3658755 - 3658668
Alignment:
Q  44 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||||||||||    
T  3658755 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacgattgttgtagttggaatgcaccttaccctacctaatgacgatc 3658668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 30309762 - 30309843
Alignment:
Q  50 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  30309762 tttggcaagtttgaattaccccatttcggaggtaagataattgttgtagttggaatgcaccttaccctaactaatgacgatc 30309843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 27035073 - 27034976
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  27035073 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcaaaggtaagacaattattgtagttggaatgca 27034976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 47487795 - 47487695
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  47487795 aggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaat 47487698  T
Q  106 gca 108  Q
    |||    
T  47487697 gca 47487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 3658920 - 3659018
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| || ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||    
T  3658920 aggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgtaat 3659017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 19160596 - 19160516
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgac 127  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  19160596 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgac 19160516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 22527786 - 22527702
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  22527786 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgatgatc 22527702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 30309587 - 30309491
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| | |||| ||||||||||| |||| ||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  30309587 aaaacatgaatgatgggtgaaatgcttgagtcat-gttgtttggcaggtttgaatttaccccatt-cacaggtaagacaattgttgtagttggaatgca 30309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 51270252 - 51270348
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| | |||| |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  51270252 aaaacatgaatgctgggtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 51270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 29707425 - 29707552
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggt---aagacaattgttgtagttgga 103  Q
    |||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||||||||||||||||||   ||||||||||||| ||||| |    
T  29707425 aggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccatttcagaggtaagaagacaattgttgcagttgta 29707524  T
Q  104 atgcatcttaccctaattaatgacgatc 131  Q
    ||||| ||| |||||| | |||||||||    
T  29707525 atgcaccttgccctaacttatgacgatc 29707552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 50068015 - 50067917
Alignment:
Q  9 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||| |  |||| |||||||||| || | |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  50068015 gaaaaacatgaatgaggggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttggaatgca 50067917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 29707293 - 29707197
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  29707293 aaaacatgaatggcgggtgaaatgcttgagtcat-gttgtttagcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 29707197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 45689567 - 45689667
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || | ||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| |||||    
T  45689567 aggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttagcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagtaggaat 45689664  T
Q  106 gca 108  Q
    |||    
T  45689665 gca 45689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 46180038 - 46179938
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||| ||||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || ||||||||||||||||||||||| |||    
T  46180038 aggaaaaacgtgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaattgttgtagttgaaat 46179941  T
Q  106 gca 108  Q
    |||    
T  46179940 gca 46179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 49262751 - 49262655
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||    
T  49262751 aaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattcttgtagttggaatgca 49262655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 44337207 - 44337330
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| || | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| | ||| |||    
T  44337207 aggaaaaacatgaatgtcgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcatttgaaat 44337304  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  44337305 gcaccttaccctaactaatgacgatc 44337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 51270120 - 51269997
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| || | ||||||| ||| ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  51270120 aggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttagcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaat 51270023  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  51270022 gcaccttaccctaactaatgacgatc 51269997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 27486649 - 27486701
Alignment:
Q  79 aggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  27486649 aggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 27486701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 29436290 - 29436168
Alignment:
Q  8 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || |||||||| |||||||| ||||||||||    
T  29436290 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatttcatt-caaaggtaagaaaattgttgcagttggaatg 29436193  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  29436192 caccttaccctaactaatgacgatc 29436168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 39856843 - 39856917
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39856843 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 39856917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 12791032 - 12790936
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| || ||||||||| ||||| || | ||||||||| ||||||||||| |||||||| ||||||||| |||||||||| ||||||||    
T  12791032 aggaaaaacatgaatgtcgggcgaaattcttgagtcct-gttgtttggtaagtttgaatttaccccatt-cagaggtaacacaattgttggagttggaa 12790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 17697467 - 17697563
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||| || || ||||||||||||||| |||| |||||||||| |||||||||| | |||||| ||| || ||||||||||||||||||||||    
T  17697467 aggaaaaacataaatgtcgggcgaaatgcttgagtcat-gttgtttggcgagtttgaatttatcccatt-caggggcaagacaattgttgtagttggaa 17697563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 18170473 - 18170569
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||| || |||||  |||||||||| |||| || |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170473 aggaaaagcaagaacgccgggcgaaatgtttgagtc-ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 21484574 - 21484654
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||  ||| || ||| |||||||||||||||||||||||||| |||||||||  |||||||||||    
T  21484574 gtttggcaagtttgaattaccatatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctacctaatgacgatc 21484654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 29762129 - 29762232
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatg 125  Q
    ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||||| |||||||||| |||||    
T  29762129 gcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatgcaccttaccctaactaatg 29762226  T
Q  126 acgatc 131  Q
    | ||||    
T  29762227 atgatc 29762232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 49427630 - 49427582
Alignment:
Q  83 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  49427630 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 49427582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 41874622 - 41874544
Alignment:
Q  29 gaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||| |||| ||||||| |||||||||||||  | |  |||| ||||||||||||||||||||||||||||||    
T  41874622 gaaatgcttgagtcat-gttgtttagcaagtttgaatttgctccattcaaaggtaagacaattgttgtagttggaatgca 41874544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 44597982 - 44597896
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||  ||||||||| |||||||||||    
T  44597982 tgttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatgcactttaccctaactaatgacgatc 44597896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 16081766 - 16081827
Alignment:
Q  44 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||| |||||||||||||||||    
T  16081766 ttgttgtttcgcaaatttgaatttaccccattttagaggtaagataattgttgtagttggaa 16081827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 18170668 - 18170728
Alignment:
Q  44 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170668 ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 39223952 - 39223857
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||| || |||||||||  |||||| || | ||||||||||||||||||||||||||||    
T  39223952 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttgacaggtttgaatttacccatt-caaatgtaagacaattgttgtagttggaatgca 39223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 48568160 - 48568064
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||  ||||||||||||  ||   |||| ||||||||||||||||||||||||||||||    
T  48568160 aaaacatgaatgccgggtgaaatgcttgattcat-gttgtttcacaagtttgaatttgcctcattcaaaggtaagacaattgttgtagttggaatgca 48568064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 13635260 - 13635308
Alignment:
Q  83 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  13635260 aagacaattgttgtggttggaatgcaccttaccctaactaatgacgatc 13635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 49598646 - 49598546
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaa---ttgttgtagttggaat 105  Q
    |||||||| ||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || |||||||||||   ||||||||||||||||    
T  49598646 aaaaacataaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaacaattgttgtagttggaat 49598549  T
Q  106 gca 108  Q
    |||    
T  49598548 gca 49598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 38044671 - 38044612
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| |||||||||||||  |||| ||||| ||||||| |||||||||||||||||    
T  38044671 tgttgtttagcaagtttgaatttgcccaattcagtggtaagataattgttgtagttggaa 38044612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 16098022 - 16098063
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgta 97  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16098022 caagtttgaattaccccatttcaga-gtaagacaattgttgta 16098063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 18842937 - 18842994
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  18842937 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 18842994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 24270292 - 24270344
Alignment:
Q  50 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24270292 tttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 24270344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 42571496 - 42571442
Alignment:
Q  47 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 101  Q
    ||||||||||||||||||||  |||| |||| |||||| ||||||||||||||||    
T  42571496 ttgtttggcaagtttgaatttacccaattcaaaggtaacacaattgttgtagttg 42571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 44337075 - 44336979
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||||||||||| ||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||    
T  44337075 aaaacatgaatgccgggcgaaatgcgtgactcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatgca 44336979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 24363531 - 24363475
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  24363531 tgtttagcaagtttgaatttaccccatt-cagagataagacaattgttgtagttggaa 24363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 21484499 - 21484436
Alignment:
Q  45 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||| ||||||||  || ||||| | ||||||||||||||||||||||||||||||    
T  21484499 tgttgtttggcaattttgaatttgcctcatttaa-aggtaagacaattgttgtagttggaatgca 21484436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 13973202 - 13973149
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  13973202 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 13973149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 14173686 - 14173739
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  14173686 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 14173739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 14772462 - 14772517
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||||||||||||| | ||||| |||||||| |||||| ||||||||||||    
T  14772462 gtttagcaagtttgaattatctcattttagaggtaacacaattcttgtagttggaa 14772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 48226799 - 48226760
Alignment:
Q  86 acaattgttgtagttggaatgcatcttaccctaattaatg 125  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  48226799 acaattgttgtagttggaatgcaccttaccctaactaatg 48226760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 49396982 - 49396929
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  49396982 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 49396929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 17686074 - 17686021
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  17686074 ttggcaagtttgaatttacctcatt-cagaggtaacacaattgttgtagttggaa 17686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29436423 - 29436519
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| || | ||||||||||||| || | ||| ||||||| ||||||||| | | |||| || |||||| |||||||||||||||||||||||    
T  29436423 aaaacatgaatgtcgagcgaaatgcttgagtcct-gttatttggcaggtttgaatttatctcatt-caaaggtaaaacaattgttgtagttggaatgca 29436519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 37778569 - 37778622
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  37778569 ttggcaagtttgaatttaccacatt-cagaggtaacacaattgttgtagttggaa 37778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 12790749 - 12790693
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  12790749 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 12790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 13283973 - 13283926
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  13283973 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaa 13283926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 13973524 - 13973481
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  13973524 caagtttgaattacccca-ttcagagg-aagacaattgttgtagtt 13973481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 17685835 - 17685779
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  17685835 tgtttagcaagtttgaatttatcccatt-cagaggtaagataattgttgtagttggaa 17685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 37778357 - 37778310
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  37778357 gtttggcaagtttgaattacccca-ttcagagg-aagaaaattgttgtag 37778310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 38046362 - 38046409
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  38046362 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 38046409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 41780971 - 41780924
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41780971 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41780924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 6436262 - 6436313
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  6436262 ttggcaagtttgaatttacccca-ttcaaaggtaaaacaattgttgtagttgg 6436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 12790879 - 12790925
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  12790879 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 12790925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 13284188 - 13284244
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||  |||  ||||  |||||||||||||||||||||||||    
T  13284188 tgtttagcaagtttgaatttgccccattcaagggtaagacaattgttgtagttggaa 13284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 23343130 - 23343181
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  23343130 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 23343181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 24269842 - 24269786
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||  |||| |||| |||||||| |||||||| ||||||||    
T  24269842 tgtttagcaagtttgaatttgcccaattcaaaggtaagataattgttgaagttggaa 24269786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 38044798 - 38044844
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  38044798 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 38044844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 38044908 - 38044857
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  38044908 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 38044857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 40532892 - 40532938
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  40532892 caagtttgaattacctcattt-agagg-aagacaattgttgtagttgga 40532938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 6436050 - 6435997
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  6436050 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 6435997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 19160782 - 19160863
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  19160782 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 19160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 22527972 - 22528053
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||| ||||| || ||||||||| ||| ||||||||| | | |||| || |||||| |||||||||||||||||||||||    
T  22527972 ggcgaaattcttgagtc-ttgttgttttgcaggtttgaatttatctcatt-caaaggtaacacaattgttgtagttggaatgca 22528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 23342919 - 23342866
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||    
T  23342919 gtttggcaagtttgaatta-cccaattcaaagg-aagacaattgttgtagctggaa 23342866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 36909839 - 36909786
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||||| |||||    
T  36909839 gtttggcaagtttgaattacccca-ttcaaagg-aagacaactgttgtagctggaa 36909786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 41781267 - 41781221
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    ||||||||||||||||| || || |||||| |||||||||||||||||    
T  41781267 caagtttgaattaccccgtt-caaaggtaacacaattgttgtagttgg 41781221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 45689717 - 45689668
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||||||    
T  45689717 caagtttgaattgccccatct-agag-taagacaattgttgtagttggaatg 45689668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 46179888 - 46179937
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  46179888 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 46179937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 50067867 - 50067916
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  50067867 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 50067916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 2e-47; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 33799437 - 33799560
Alignment:
Q  8 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 107  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33799437 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 33799536  T
Q  108 atcttaccctaattaatgacgatc 131  Q
    | |||||||||| |||||||||||    
T  33799537 accttaccctaactaatgacgatc 33799560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 28706027 - 28706147
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28706027 aggaaaaacatgaacgttgggcgaaatgcttgagtcattgccgtttggcaagtttgaattaccccatttcacaagtaagacaattgttgtagttggaatg 28706126  T
Q  107 catcttaccctaattaatgac 127  Q
    || |||||||||| |||||||    
T  28706127 caccttaccctaactaatgac 28706147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 42168845 - 42168969
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42168845 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaatg 42168944  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    ||||||| ||||| |||||||||||    
T  42168945 catcttatcctaactaatgacgatc 42168969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 34615280 - 34615165
Alignment:
Q  9 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34615280 gaaaaacatgaacgttgggcgaaatgcttgagtcatggtcgtttgtcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgca 34615181  T
Q  109 tcttaccctaattaat 124  Q
     |||||||||| ||||    
T  34615180 ccttaccctaactaat 34615165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 38033810 - 38033934
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38033810 aggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttatcaagtttgaattacccaatttcagaggtaagacaattgttgtagttggaatg 38033909  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  38033910 caccttaccctaactaatgacgatc 38033934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 43693466 - 43693342
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43693466 aggaaaaacatgaatgccgagcgaaatgcttgagtccttgccgtttggcaagtttgaattaccccatttcagaggtaagaaaattgttgtagttggaatg 43693367  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  43693366 caccttaccctaactaatgacgatc 43693342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 43638562 - 43638686
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43638562 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggctatttggcaagtttgaattaccccatttcagaggtaagacaattattgtagttggaatg 43638661  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  43638662 caccttaccctaactaatgacgatc 43638686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 40415586 - 40415462
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||| | | || |  |||||| |||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  40415586 aggaaaaacatgaatgccgagcgaaatgcttaagttatggccgtttggtaagtttgaattaccccatttcataggtaagagaattgttgtagttgaaatg 40415487  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  40415486 caccttaccctaactaatgacgatc 40415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 40414937 - 40414827
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40414937 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgataagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatg 40414838  T
Q  107 catcttaccct 117  Q
    || ||||||||    
T  40414837 caccttaccct 40414827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 15032249 - 15032333
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  15032249 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatgacgatc 15032333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 22549407 - 22549284
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| | || ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  22549407 aggaaaaacatgaatgctgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaat 22549310  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
     || |||||||||| |||||||||||    
T  22549309 acaccttaccctaactaatgacgatc 22549284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 24861671 - 24861548
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| || ||||||    
T  24861671 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagatggaat 24861574  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  24861573 gcaccttaccctaactaatgacgatc 24861548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 485166 - 485267
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  485166 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 485262  T
Q  127 cgatc 131  Q
    |||||    
T  485263 cgatc 485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 2417242 - 2417120
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || |  |||||||||| |||| | ||| | |||| || ||||||||||||||||| ||||||||||    
T  2417242 aggaaaaacatgaatgccgagcgaaatgcttgagtccta-ttgtttggcaggtttaatttatctcatt-caaaggtaagacaattgttgaagttggaatg 2417145  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  2417144 caccttaccctaactaatgacgatc 2417120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 31171740 - 31171799
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31171740 tgttgtttaacaagtttgaattatctcatttcagaggtaagacaattgttgtagttggaa 31171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 28705898 - 28705805
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 101  Q
    |||||||||| ||| || ||||||||||||||| || | |||||||| ||||||||||||  |||  |||| |||||||||||||||||||||||    
T  28705898 aggaaaaacacgaatgtggggcgaaatgcttgagtcct-gttgtttgacaagtttgaattttccccattcaaaggtaagacaattgttgtagttg 28705805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 42168716 - 42168616
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || | |||||||||||||||||| | |||||||||  | ||||| |||||||||||||||||||||    
T  42168716 aggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgactgtaccccattcga-aggtaggacaattgttgtagttggaat 42168619  T
Q  106 gca 108  Q
    |||    
T  42168618 gca 42168616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 41363909 - 41363861
Alignment:
Q  83 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  41363909 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 41363861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 40415751 - 40415814
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||| |||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  40415751 tgttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgtagttggaatgca 40415814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 22549575 - 22549635
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||    
T  22549575 tgtttggcaagtttgaattgaccccatttaa-aggtaagacaattgttgcagttggaatgca 22549635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 26452653 - 26452530
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||||| || || | |||||||| |||| || | ||||||||||| ||||||||| | | |||| || ||||| ||||||||||| |||||||||    
T  26452653 aggaaaaacataaatgtcgagcgaaatgtttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtatgacaattgttgcagttggaat 26452556  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
     || |||||||||| |||||||||||    
T  26452555 acaccttaccctaactaatgacgatc 26452530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 3589188 - 3589245
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttc--agaggtaagacaattgttgtagtt 100  Q
    |||||||| |||||||||||||| | ||||||  ||||||||||||||||||||||||    
T  3589188 tgttgtttagcaagtttgaattatctcatttcagagaggtaagacaattgttgtagtt 3589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 41275649 - 41275599
Alignment:
Q  81 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||||||||    
T  41275649 gtaagacaattattgcagttggaatgcaccttaccctaactaatgacgatc 41275599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 38033645 - 38033582
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| ||||||||||| ||  |||| || ||||||||||||||||||||||||||||||    
T  38033645 tgttgtttggtaagtttgaatttactacatt-caaaggtaagacaattgttgtagttggaatgca 38033582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 19242088 - 19242141
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||    
T  19242088 gtttggcaagtttgaactacccca-ttcaga-gaaagacaattgttgtagttggaa 19242141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 19315272 - 19315325
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||    
T  19315272 gtttggcaagtttgaactacccca-ttcaga-gaaagacaattgttgtagttggaa 19315325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 16576152 - 16576209
Alignment:
Q  47 ttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  16576152 ttgtttggcaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 16576209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 24861865 - 24861899
Alignment:
Q  74 ttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||| ||||||||||||||||||||||||||||||    
T  24861865 ttcaaaggtaagacaattgttgtagttggaatgca 24861899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 28167338 - 28167391
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  28167338 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 28167391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 42603743 - 42603695
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  42603743 tgtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 42603695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 44050900 - 44050996
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| || | ||||||||||||| || |||||||||| || ||||||||| | | |||| || ||||||||||||||| | ||||||||||||    
T  44050900 aaaacatgaatgtcgagcgaaatgcttgagtc-ttgttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgtggcagttggaatgca 44050996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 40415069 - 40415153
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgt 96  Q
    |||||||||| || ||| |||||| |||| || | ||||||||||| |||||||||  |||  |||| ||||||||||||||||||    
T  40415069 aaaacatgaatgtcgggtgaaatgattgagtcct-gttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgt 40415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 40702649 - 40702602
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  40702649 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 40702602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 41856900 - 41856947
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41856900 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41856947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 31171535 - 31171479
Alignment:
Q  49 gtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||||||||||||| || ||||| |||||| ||| |||||||||||||||||    
T  31171535 gtttagcaagtttgaattaacctcattttagaggttagataattgttgtagttggaa 31171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 41856686 - 41856635
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  41856686 ttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 41856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 42603951 - 42604002
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  42603951 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 42604002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 484997 - 484916
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  484997 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 2417579 - 2417530
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||| |||||| ||||||||||||| ||||||||||    
T  2417579 caagtttgaattgccccatt-cagagg-aagacaattgttgcagttggaatg 2417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 16575965 - 16575912
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||| ||||||||| |||| || ||| ||||||||||||||||||||||    
T  16575965 gtttggcaagtatgaattacctcatt-caaagg-aagacaattgttgtagttggaa 16575912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 16576269 - 16576216
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  16576269 gtttagcaagtttggattaccccatc-cagagg-aagacaattgttgtagttggaa 16576216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 28705748 - 28705797
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  28705748 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 28705797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 38033532 - 38033581
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  38033532 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 38033581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 41856450 - 41856391
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| |||||||||||||  |||  ||||| ||||||| |||||||| ||||||||    
T  41856450 tgttgtttagcaagtttgaattttccccattcagtggtaagataattgttgcagttggaa 41856391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 43637241 - 43637186
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||||||||||||  ||  |||||| || ||||||||||||||||||||||    
T  43637241 gtttagcaagtttgaatttgccactttcaggggcaagacaattgttgtagttggaa 43637186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 43637371 - 43637420
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  43637371 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 43637420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 3e-46; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 45939845 - 45939720
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaatt-gttgtagttggaat 105  Q
    |||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45939845 aggaaaaacatgaacgttgggcaaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattagttgtagttggaat 45939746  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  45939745 gcaccttaccctaactaatgacgatc 45939720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 27759646 - 27759522
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27759646 aggaaaaacatgaacgctgggcgaaatgcttgagtcatagccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttgaaatg 27759547  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  27759546 caccttaccctaactaatgacgatc 27759522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 31824517 - 31824641
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||    
T  31824517 aggaaaaacatgaacgttgggcgaaatgcttgagtaatggccgtttggcaagtttaaattaccctatttcaaatgtaagacaattgttgtagttggaatg 31824616  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  31824617 caccttaccctaactaatgacgatc 31824641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 51027655 - 51027779
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| | |||||||||||||||| |||| |  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  51027655 aggaaaaacatgaatgctgggcgaaatgcttgagtcatggccgcttggcaagtttgaattaccccatttcagaggtacgacaattgttgtagttggagtg 51027754  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  51027755 caccttaccctaactaatgacgatc 51027779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 21711849 - 21711725
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21711849 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatg 21711750  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  21711749 caccttaccctaactaatgacgatc 21711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 25762917 - 25762793
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| | | |||||||||||||| |||| |  ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25762917 aggaaaaacatgaatgcttggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccattttagaggtaagacaattgttgcagttggaatg 25762818  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  25762817 caccttaccctaactaatgacgatc 25762793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 49064295 - 49064174
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 109  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  49064295 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgcac 49064196  T
Q  110 cttaccctaattaatgacgatc 131  Q
    |||||||||| |||||||||||    
T  49064195 cttaccctaactaatgacgatc 49064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 51428080 - 51428204
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  |  |||||||||||| || | |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51428080 aggaaaaacatgaatgccgatcgaaatgcttgagtcctggccgtttgccaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 51428179  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  51428180 caccttaccctaactaatgacgatc 51428204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 37866728 - 37866602
Alignment:
Q  5 acaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  37866728 acaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacgactgttgcagttggaa 37866629  T
Q  105 tgcatcttaccctaattaatgacgatc 131  Q
    |||| |||||||||| |||||||||||    
T  37866628 tgcaccttaccctaactaatgacgatc 37866602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 46816416 - 46816537
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 109  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  46816416 aaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatctcagaggtaagacaattgttgtagttggaatgcac 46816515  T
Q  110 cttaccctaattaatgacgatc 131  Q
    ||| |||||| |||||||||||    
T  46816516 cttgccctaactaatgacgatc 46816537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 33163432 - 33163556
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || | |||||||| |||| || | |  |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  33163432 aggaaaaacatgaatgtcgagcgaaatgtttgagtcctggccgtttggcaagtttgaaataccccatttaagaggcaagacaattgttgtagttggaatg 33163531  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  33163532 caccttaccctaactaatgacgatc 33163556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 1226441 - 1226354
Alignment:
Q  44 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1226441 ttgtcgtttggcaagtttgaattaccccatttatgaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 1226354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 20901598 - 20901680
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20901598 gtttggaaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 20901680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 14330584 - 14330706
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| | |||||||| |||| |||   |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14330584 aggaaaaacatgaatgatgggcgaa-tgct-gaagacttgtcgtttgataagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 14330681  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||| ||| |||||||||||    
T  14330682 caccttaccttaactaatgacgatc 14330706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 242346 - 242428
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||  ||| |||||||||||    
T  242346 gtttggcaagtttgaattaccctatttcagaggtaagacaattgttatagttggaatgcaccttactttaactaatgacgatc 242428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 20901435 - 20901335
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  || |||||||||||| |||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  20901435 aggaaaaacatgaatgcgggacgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaat 20901338  T
Q  106 gca 108  Q
    |||    
T  20901337 gca 20901335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 55797039 - 55796938
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||| |||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  55797039 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattagcccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 55796943  T
Q  127 cgatc 131  Q
    |||||    
T  55796942 cgatc 55796938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 21017105 - 21017189
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  21017105 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 21017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 27759775 - 27759875
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||||||||||  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||||||||||| ||||||||||||    
T  27759775 aggaaaaacatgaacgcggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaagacaattgctgtagttggaat 27759872  T
Q  106 gca 108  Q
    |||    
T  27759873 gca 27759875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 40353701 - 40353781
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgac 127  Q
    ||||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  40353701 tgttgtttgacaggtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgac 40353781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 9489996 - 9489873
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| || | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  9489996 aggaaaaacatgaatgtcgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaat 9489899  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    |||  ||||||||| |||||||||||    
T  9489898 gcactttaccctaactaatgacgatc 9489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 38132875 - 38132779
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||| ||||||    
T  38132875 aaaacatgaatgcggggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttgaaatgca 38132779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 6177226 - 6177327
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6177226 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6177322  T
Q  127 cgatc 131  Q
    |||||    
T  6177323 cgatc 6177327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 17211773 - 17211829
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17211773 tgttgtttagcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 17211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 41794473 - 41794574
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  41794473 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 41794569  T
Q  127 cgatc 131  Q
    |||||    
T  41794570 cgatc 41794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 49095041 - 49094940
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  49095041 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 49094945  T
Q  127 cgatc 131  Q
    |||||    
T  49094944 cgatc 49094940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 51427948 - 51427858
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||| || ||||||||||||||| || | ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  51427948 aaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 51427858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 56139206 - 56139105
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  56139206 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 56139110  T
Q  127 cgatc 131  Q
    |||||    
T  56139109 cgatc 56139105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21711981 - 21712077
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| || ||| ||||||||||| | | |||||||||||| ||||||||| ||| |||| || ||||||||||||||||||||||||||||||    
T  21711981 aaaacatgaatgtcgggtgaaatgcttgagt-actgttgtttggcacgtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaatgca 21712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 25763046 - 25763146
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || |||||||||| ||||||||| || ||||||||  | ||||||||||||||||| |||||||||    
T  25763046 aggaaaaacatgaatgcggggcgaaatgcttgagtc-ttgttgtttgacaagtttgactttaccccattcga-aggtaagacaattgttggagttggaat 25763143  T
Q  106 gca 108  Q
    |||    
T  25763144 gca 25763146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 32937834 - 32937914
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||  |||||||||||    
T  32937834 gtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctatctaatgacgatc 32937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 39589379 - 39589475
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| || | | |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  39589379 aaaacatgaatgtcgtgtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgaagttggaatgca 39589475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 45939973 - 45940073
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || | |||||||||||||||||| || ||| ||||  | |||||||||||||||||||||||||||    
T  45939973 aggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgactttacctcattcga-aggtaagacaattgttgtagttggaat 45940070  T
Q  106 gca 108  Q
    |||    
T  45940071 gca 45940073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 1043067 - 1042944
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||   |||||||| | | |||| || ||||||||||||||||| |||||||||    
T  1043067 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggccgatttgaatttatctcatt-caaaggtaagacaattgttgcagttggaat 1042970  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    | | |||||||||| |||||||||||    
T  1042969 gtaccttaccctaactaatgacgatc 1042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 14330454 - 14330358
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| || ||||||||||||||| || |  ||||||| | ||||||||||| ||   |||| ||||||||||||||||||||||||||    
T  14330454 aggaaaaacatgaatgtcgggcgaaatgcttgagtccta-ttgtttgaccagtttgaattaacctcattcaaaggtaagacaattgttgtagttggaa 14330358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 18412864 - 18412816
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18412864 caagtttgaattaccccatttcaga-gtaagacaattgttgtagttggaa 18412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 28082555 - 28082433
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||||||||||||    
T  28082555 aggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaat 28082459  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  28082458 gcaccttaccctaactaatgacgatc 28082433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 39589247 - 39589124
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  39589247 aggaaaaacatgaatgccgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaat 39589150  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| ||||||| || |||||||||||    
T  39589149 gcaccttaccccaactaatgacgatc 39589124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 31324450 - 31324395
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  31324450 gtttagcaagtttgaattatctcatttcaaaggtaagacaattgttgtagttggaa 31324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 43889428 - 43889481
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43889428 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagttggaa 43889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 20778796 - 20778881
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||||||  ||   |||| ||| |||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  20778796 tgttgtttggcaagtttgaatttgcctcattcaaagg-aagacaattgttgtggttggaatgcaccttaccctacctaatgacgatc 20778881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 17211536 - 17211488
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  17211536 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 17211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 18413073 - 18413134
Alignment:
Q  44 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  18413073 ttgttgtttagcaagtttgaatttacctaatttcagaggtaagataattgttgtagttggaa 18413134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 49817363 - 49817307
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  49817363 tgtttggcaagtttgaatttaccccatt-caggggtaagacaattgttgtagttggaa 49817307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 37866891 - 37866954
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  37866891 tgttgtttgacaagtttgaattgacccca-ttcaaaggtaagacaattgttgcagttggaatgca 37866954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 46816262 - 46816184
Alignment:
Q  29 gaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||| || ||||||||| ||||||||||||| ||| |||| || |||||||||||||||||||||| |||||||    
T  46816262 gaaatgcttgagtc-ttgttgtttcgcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 46816184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 21169729 - 21169676
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  21169729 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagttggaa 21169676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 242194 - 242105
Alignment:
Q  9 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttg-aattaccccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||| || || || | |||||||||| |||| ||||||||||||||||| |||||||||  |||| |||||| |||||||||||||||    
T  242194 gaaaaacataaatgtcggacaaaatgcttgagtcat-gttgtttggcaagtttgaaattacccc--ttcaaaggtaacacaattgttgtagtt 242105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 21411842 - 21411879
Alignment:
Q  63 aattaccccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21411842 aattaccccatttcagaggtaagataattgttgtagtt 21411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 42886753 - 42886809
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||    
T  42886753 tgtttggcaagtttgaatttacccca-ttcagaggtaacacaattgttggagttggaa 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 26591632 - 26591581
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  26591632 ttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 26591581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 49423364 - 49423410
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  49423364 caagtttgaattaccccatt-cagagg-aagacaattgttgtagttgga 49423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 21411601 - 21411566
Alignment:
Q  65 ttaccccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||||||| |||||||||||||    
T  21411601 ttaccccatttcagaggtaagataattgttgtagtt 21411566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 36776448 - 36776501
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  36776448 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 36776501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 44560109 - 44560162
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  44560109 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 44560162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 51027526 - 51027437
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 97  Q
    |||||||| ||||| |  ||| ||||||||||| || | ||||||| ||||||||||||| |||||||| || |||||||||||||||||||    
T  51027526 aggaaaaatatgaatgcggggtgaaatgcttgagtcct-gttgttttgcaagtttgaatttaccccatt-caaaggtaagacaattgttgta 51027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 56139375 - 56139456
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  56139375 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 56139456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 885320 - 885354
Alignment:
Q  74 ttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||| ||||||||||||||||||||||||||||||    
T  885320 ttcaaaggtaagacaattgttgtagttggaatgca 885354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 22437189 - 22437142
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||||||  || | ||||||||||||||||    
T  22437189 gtttggcaagtttgaattaccccattt--gaaggaagacaattgttgtag 22437142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 49064431 - 49064523
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| || ||| |||| |||||| || | ||||||||||||||||||||| | | |||| || |||||| |||||||||||||||||||    
T  49064431 aaaacatgaatgtcgggtgaaacgcttgagtcct-gttgtttggcaagtttgaatttatctcatt-caaaggtaacacaattgttgtagttggaa 49064523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 13855022 - 13855075
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 97  Q
    ||||||||  |||||||||||| | || ||||||||||||||||||||||||||    
T  13855022 tgttgtttaacaagtttgaatttatccaatttcagaggtaagacaattgttgta 13855075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 24607027 - 24606972
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||| |||||||||||||| |||| || ||| ||||||||||||||||||||||||    
T  24607027 gtttggaaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatg 24606972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 24607211 - 24607271
Alignment:
Q  44 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| ||||| || |||| |||||||| ||||||| |||||||||    
T  24607211 ttgttgtttggcaagtttgaatttacctca-ttcaaaggtaagataattgttttagttggaa 24607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 31324703 - 31324756
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 97  Q
    |||| ||| ||||||||||||| | |||||||||||||||| ||||||||||||    
T  31324703 tgttatttagcaagtttgaatttatcccatttcagaggtaacacaattgttgta 31324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 31824388 - 31824305
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaatt 91  Q
    ||||||||||||||||  ||||||||||||||| ||  |||| |||||| |||||||| ||||| || |||| |||||||||||||    
T  31824388 aggaaaaacatgaacgcggggcgaaatgcttgagtc-ctgttatttggccagtttgaatttacctca-ttcaaaggtaagacaatt 31824305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 49817572 - 49817623
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 101  Q
    ||||||||||||||||||||||||||| || | | |||||||||||||||||||    
T  49817572 tgtttggcaagtttgaattaccccatt-caaatg-aagacaattgttgtagttg 49817623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 2773609 - 2773563
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  2773609 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 2773563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 9717840 - 9717868
Alignment:
Q  72 atttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||||||||||||||    
T  9717840 atttcagaggtaagacaattgttgtagtt 9717868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 22437401 - 22437452
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  22437401 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 22437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 34529403 - 34529449
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  34529403 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 34529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 49791653 - 49791602
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||||| |||||||| || ||||||| ||||||||||||||||    
T  49791653 ttggcaagtttgaatttaccccatt-caaaggtaagccaattgttgtagttgg 49791602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 957384 - 957437
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||| |||||||||| |||| ||| |||||||||||||||| |||||    
T  957384 gtttggcaagtttcaattacccca-ttcaaagg-aagacaattgttgtagctggaa 957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 6177057 - 6176976
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  6177057 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 6176976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 104
Target Start/End: Complemental strand, 17292214 - 17292183
Alignment:
Q  73 tttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||| |||||||||||||||||||    
T  17292214 tttcagaggtaaaacaattgttgtagttggaa 17292183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 21016919 - 21016838
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  21016919 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 21016838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 28082690 - 28082783
Alignment:
Q  14 acatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||| || ||| ||||||||||| || | |||||||| || |||||||| || | |||| || ||||||||||||||||| ||||||||||||    
T  28082690 acatgaatgtcgggtgaaatgcttgagtcct-gttgtttgacaggtttgaatctatctcatt-caaaggtaagacaattgttggagttggaatgca 28082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 32937648 - 32937585
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||||||||||||  ||   ||||  ||||||| |||||||||||||||| ||||    
T  32937648 tgttgtttggcaagtttgaatttgcctcattcaacggtaagataattgttgtagttggagtgca 32937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 34153215 - 34153268
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||||| |||||    
T  34153215 gtttggcaagtttgaattacccca-ttcaaagg-aagacaactgttgtagctggaa 34153268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 46816134 - 46816183
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  46816134 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 46816183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 49095210 - 49095291
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || ||||||||| ||| ||||||||| | |||||| || |||||| ||||||||||  |||||||||||    
T  49095210 ggcgaaatgcttgagtc-ttgttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttggggttggaatgca 49095291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 49423686 - 49423740
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||| |||||||||||||||| || |||||| ||||||||||||| |||||    
T  49423686 gtttgacaaatttgaattaccccatt-caaaggtaacacaattgttgtagctggaa 49423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 51027299 - 51027241
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| |||||||||||||  |||  | ||||| |||||||||||||||||||||||    
T  51027299 tgttgtttagcaagtttgaatttgccccatccagag-taagacaattgttgtagttggaa 51027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 51027376 - 51027425
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  51027376 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 51027425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 4e-45; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 19400681 - 19400558
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||| |||||| |||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19400681 aggaaaatcatgaatgttgggcgaaatgcttgagtcatggtcgtttggcaaatttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 19400582  T
Q  107 catcttaccctaattaatgacgat 130  Q
    || |||||||||| ||||||||||    
T  19400581 caccttaccctaactaatgacgat 19400558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 3601659 - 3601535
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||||||| |||| |||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3601659 aggaaaaacatgaacgctgggcgaaatgtttgagtcatggccatttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 3601560  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || ||||| |||| |||||||||||    
T  3601559 caccttactctaactaatgacgatc 3601535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 3459108 - 3458984
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||| ||||||| |||||  ||| ||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3459108 aggaaaaatatgaacgctgggcttaatacttgagtcatggtcgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatg 3459009  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  3459008 caccttaccctaactaatgacgatc 3458984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 40011935 - 40011834
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||||||||||||||||||||| | || |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40011935 aggaaaaacatgaacgttgggcgaaatgcttgagttatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 40011836  T
Q  107 ca 108  Q
    ||    
T  40011835 ca 40011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 1971683 - 1971564
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| | |||||||||||||||| |||| |   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1971683 aggaaaaacatgaaagctgggcgaaatgcttgagtcatggccatttggcaagtttgaattaccccatttcagaggcaagacaattgttgtagttggaatg 1971584  T
Q  107 catcttaccctaattaatga 126  Q
    || |||||| ||| ||||||    
T  1971583 caccttaccataactaatga 1971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 7082497 - 7082415
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||||    
T  7082497 gtttggcaagtttgaattaccccttttcagaggtaagagaattgttgtagttggaatgcaccttaccataactaatgacgatc 7082415  T

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Target: chr5; HSP #7
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 3169984 - 3170080
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  3169984 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatgca 3170080  T

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Target: chr5; HSP #8
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 19400810 - 19400910
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || ||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||||||    
T  19400810 aggaaaaacatgaatgaggggcgaaatgcttgagtc-ttgttgtttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaat 19400907  T
Q  106 gca 108  Q
    |||    
T  19400908 gca 19400910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 7141 - 7242
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    |||||||||| || |||| |||||||| ||| |||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  7141 gcgaaatgctcgagtcat-gttgtttgacaaatttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 7237  T
Q  127 cgatc 131  Q
    |||||    
T  7238 cgatc 7242  T

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Target: chr5; HSP #10
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 8576053 - 8576150
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    |||||||||| || || |||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  8576053 gcgaaatgctcgagtc-ttgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 8576149  T

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Target: chr5; HSP #11
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 3169853 - 3169766
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 94  Q
    |||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3169853 aggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 3169766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 27661306 - 27661386
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgac 127  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  27661306 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgac 27661386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 28881269 - 28881185
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||  |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28881269 tgttgtttgacaagtttgaattaccccatt-caaaga-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 28881185  T

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Target: chr5; HSP #14
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 40012064 - 40012163
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  40012064 aggaaaaacatgaatgc-gggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 40012160  T

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Target: chr5; HSP #15
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 1971812 - 1971912
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | || |||||||||| || | ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  1971812 aggaaaaacatgaatgcggtgcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 1971909  T
Q  106 gca 108  Q
    |||    
T  1971910 gca 1971912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 3601788 - 3601888
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  |||| |||||||||| ||||  ||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||    
T  3601788 aggaaaaacatgaatgcggggcaaaatgcttgagtcata-ttgtttggcaaatttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 3601885  T
Q  106 gca 108  Q
    |||    
T  3601886 gca 3601888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 22283849 - 22283766
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgat 130  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||| ||||| ||| ||||||    
T  22283849 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttatcctaactaaggacgat 22283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 19036586 - 19036687
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  19036586 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 19036682  T
Q  127 cgatc 131  Q
    |||||    
T  19036683 cgatc 19036687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 3459240 - 3459337
Alignment:
Q  10 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||  ||||||||||||||| |||| |||||||||| ||||| |||| ||| |||| || |||||||||||||||||||||| |||||||    
T  3459240 aaaaacatgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttaaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 3459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 8538270 - 8538148
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||||||||||||    
T  8538270 aggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaat 8538174  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  8538173 gcaccttaccctaactaatgacgatc 8538148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 11347025 - 11346903
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||||||||||||    
T  11347025 aggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaat 11346929  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  11346928 gcaccttaccctaactaatgacgatc 11346903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 12743168 - 12743225
Alignment:
Q  44 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12743168 ttgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 11028045 - 11027971
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  11028045 caagtttgaattgccccatc-cag-ggtaagacaattgttgtggttggaatgcaccttaccctaactaatgacgatc 11027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 12805987 - 12806043
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12805987 tgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12806043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 30709840 - 30709792
Alignment:
Q  83 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  30709840 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 30709792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 12806332 - 12806379
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12806332 gcaagtttgaattcaccccatttcagaggtaagacaattgttgtagtt 12806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 541598 - 541648
Alignment:
Q  81 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  541598 gtaagacaattgttgcagttggaatgcaccttaccctaactaatgacgatc 541648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 12743511 - 12743558
Alignment:
Q  54 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  12743511 gcaagtttgaattcacgccatttcagaggtaagacaattgttgtagtt 12743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 7082671 - 7082763
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| || ||| ||||||||||| |||| ||||| || |||||||||| |||||||| |||| |||||| |||||| ||||||||||||    
T  7082671 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtatgacaagtttgaatttacccca-ttcaaaggtaacacaatttttgtagttggaa 7082763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 10398273 - 10398330
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  10398273 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 10398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 4724004 - 4724051
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 98  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  4724004 gtttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtag 4724051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 12742957 - 12742909
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12742957 caagtttgaattaccccatttcgtag-taagacaattgttgtagttggaa 12742909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 36311871 - 36311932
Alignment:
Q  44 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||  |||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  36311871 ttgttgtttaacaagtttgaccttatccaatttcagaggtaagacaattgttgtagttggaa 36311932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 18308742 - 18308801
Alignment:
Q  44 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||| |||||| |||||||||  |||||| || ||||||||||||||||||||||||||    
T  18308742 ttgttgcttggcatgtttgaatttacccatt-caaaggtaagacaattgttgtagttggaa 18308801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 33371112 - 33371175
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||||||    
T  33371112 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaatgca 33371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 18308537 - 18308484
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  18308537 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtaggtggaa 18308484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 104
Target Start/End: Original strand, 13131035 - 13131065
Alignment:
Q  74 ttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||||||||||    
T  13131035 ttcagaggtaagacaattgttgtagttggaa 13131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 36350043 - 36349990
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  36350043 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 36349990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 1695519 - 1695575
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  1695519 tgtttagcaagtttgaatttaccccattt-agaggtaagaaaattgttgcagttggaa 1695575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 2599532 - 2599483
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgt 93  Q
    |||||||| ||||||||||||| | || ||||||||||||||||||||||    
T  2599532 tgttgtttagcaagtttgaatttatccaatttcagaggtaagacaattgt 2599483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 12805775 - 12805727
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||||||||    
T  12805775 caagtttgaattaccccatttc-gtagtaagacaattgttgcagttggaa 12805727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 35566000 - 35566056
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||||||    
T  35566000 tgtttagcaagtttgaatttacccca-ttcagaggtaagataattgttgcagttggaa 35566056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 36349801 - 36349745
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  36349801 tgtttagcaagtttgaatttaccccattt-agaggtaagatgattgttgtagttggaa 36349745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 1400232 - 1400285
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||||  | | | |||||||||||||||| |||||    
T  1400232 gtttggcaagtttgaattaccccatt--aaaaggaagacaattgttgtagctggaa 1400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 4723682 - 4723728
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||    
T  4723682 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttgga 4723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 11347157 - 11347247
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||| || ||| ||||||||||| || | |||||||| || |||| |||| |||||||| || |||||| |||||||||||||||||    
T  11347157 aaaacatgaatgtcgggtgaaatgcttgagtcct-gttgtttgacaggtttaaatttaccccatt-caaaggtaacacaattgttgtagttgg 11347247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 17195314 - 17195346
Alignment:
Q  72 atttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||| ||||||||||||||||||||||||||    
T  17195314 atttcaaaggtaagacaattgttgtagttggaa 17195346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 6972 - 6891
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||| ||||||||||||    
T  6972 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgcagttggaatgca 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 1695066 - 1695013
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||    
T  1695066 gtttggaaagtttgaattacccaatt-cagagg-aagacaattgttgtagctggaa 1695013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 1695282 - 1695332
Alignment:
Q  54 gcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  1695282 gcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 1695332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 3459387 - 3459338
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  3459387 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 3459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 8575884 - 8575803
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  8575884 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 8575803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 17366452 - 17366398
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    ||||| ||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  17366452 tgtttagcaagtttgaatttacctcatt-cagaggtaagataattgttgtagttgg 17366398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 19036282 - 19036335
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  19036282 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 19036335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 19036417 - 19036336
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  19036417 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 19036336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 19400960 - 19400911
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  19400960 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 19400911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 22284169 - 22284116
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||    
T  22284169 ttggcaagtttgaattgccccatc-cagag-taagacaattgttgcagttggaatg 22284116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 28881589 - 28881536
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  28881589 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 28881536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 72
Target Start/End: Original strand, 36350251 - 36350278
Alignment:
Q  45 tgttgtttggcaagtttgaattacccca 72  Q
    ||||||||||||||||||||||||||||    
T  36350251 tgttgtttggcaagtttgaattacccca 36350278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 89; Significance: 3e-43; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 2588 - 2464
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    ||||||||||||||| ||||||||||||||||| |||| |  |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2588 aggaaaaacatgaacattgggcgaaatgcttgagtcatggccgtttggtaattttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 2489  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  2488 caccttaccctaactaatgacgatc 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 4805 - 4834
Alignment:
Q  79 aggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||||||||||||||||||||    
T  4805 aggtaagacaattgttgtagttggaatgca 4834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 3e-43; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 47269219 - 47269095
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||||| |||||||| ||||||| |  || ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  47269219 aggaaaaacatgaacgtttggcgaaatacttgaattagggtcgtttggcaagtttgaattaccccatttcacaggtaagctaattgttgtagttggaatg 47269120  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||    
T  47269119 catcttaccctaattaatgacgatc 47269095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 18237885 - 18237761
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||| ||||||| ||||| |||||||||| |||| |  ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  18237885 aggaaaaatatgaacgatgggccaaatgcttgagtcatggccgtttggcaagtttgagttaccccaattcagaggtaagacaattgttgtagttggaatg 18237786  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  18237785 caccttaccctaactaatgacgatc 18237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 48220630 - 48220754
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||||||| |||||||||||| |||| |  ||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  48220630 aggaaaaacatgaacgttggacgaaatgcttgagtcatggccgtttgacaagtttgaattagcccatttcagagctaagataattgttgtagttggaatg 48220729  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  48220730 caccttaccctaactaatgacgatc 48220754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 2205940 - 2206047
Alignment:
Q  24 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 123  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  2205940 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaa 2206039  T
Q  124 tgacgatc 131  Q
    ||||||||    
T  2206040 tgacgatc 2206047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 17183536 - 17183413
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||  ||| |||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17183536 aggaaaaacatgaacactggacgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatg 17183437  T
Q  107 catcttaccctaattaatgacgat 130  Q
    || || ||||||| ||||||||||    
T  17183436 cacctcaccctaactaatgacgat 17183413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 28978943 - 28979062
Alignment:
Q  12 aaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatct 111  Q
    ||||||||| || | ||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  28978943 aaacatgaatgtcgagcgaaatgctttagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgcacct 28979042  T
Q  112 taccctaattaatgacgatc 131  Q
    |||||||| |||||||||||    
T  28979043 taccctaactaatgacgatc 28979062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 34141185 - 34141062
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  34141185 aggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaatg 34141087  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  34141086 caccttaccctaactaatgacgatc 34141062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 39477126 - 39477250
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39477126 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagcggtaagataattgttgtagttggaatg 39477225  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  39477226 caccttaccctaactaatgacgatc 39477250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 26601706 - 26601788
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  26601706 gtttgacaagtttgaattaccccatttcagaggtaagataattgttgtagttggaatgcaccttaccctaactaatgacgatc 26601788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 41217892 - 41217811
Alignment:
Q  50 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  41217892 tttggtaagtttgaattaccccatatcagaggtaagacaattgctgtagttggaatgcaccttaccctaactaatgacgatc 41217811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 13920587 - 13920503
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13920587 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttaccctaactaatgacgatc 13920503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 30360835 - 30360713
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |||||||||| || ||||    |||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||    
T  30360835 aggaaaaacatgaatgttgggcgaa-tg-ttgaggacttgtcgtttggcaagtttgaattacccaatttcagatgtaagacaatagttatagttggaatg 30360738  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    ||  ||||||||| |||||||||||    
T  30360737 cacattaccctaactaatgacgatc 30360713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 30360965 - 30361064
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || ||||||||||||||| || | |||||||||| | ||||||||  |||| |||| ||||||||||||||||||||||||||||    
T  30360965 aggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcgaatttgaatttacccaattcaaaggtaagacaattgttgtagttggaatg 30361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 18238014 - 18238114
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||||||||||   |||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  18238014 aggaaaaacatgaacgcgaggcgaaatgcttgagtcct-gttgtttggctagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 18238111  T
Q  106 gca 108  Q
    |||    
T  18238112 gca 18238114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 48220502 - 48220402
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  ||||||||||||||| || || ||||||||||||||||||||  |||  |||| |||| |||||||||||||||||||||||    
T  48220502 aggaaaaacatgaatgcggggcgaaatgcttgagtc-ttattgtttggcaagtttgaatttgccccattcaaaggtgagacaattgttgtagttggaatg 48220404  T
Q  107 ca 108  Q
    ||    
T  48220403 ca 48220402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 9367029 - 9367130
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  9367029 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 9367125  T
Q  127 cgatc 131  Q
    |||||    
T  9367126 cgatc 9367130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 10523367 - 10523267
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || || ||||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||||| || |||||||||| ||||||    
T  10523367 gcgaaatgcttgagtcctt-ttgtttgacaagtttgaattaccacatt-caaagg-aagacaattgttgtagttggaatacaccttaccctaactaatga 10523271  T
Q  127 cgat 130  Q
    ||||    
T  10523270 cgat 10523267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 17320137 - 17320210
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgat 130  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  17320137 caagtttgaattaccccatttaa-agg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgat 17320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 17183665 - 17183765
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  17183665 aggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 17183762  T
Q  106 gca 108  Q
    |||    
T  17183763 gca 17183765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 45363139 - 45363262
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| || | |||||||| || ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  45363139 aggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaat 45363236  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  45363237 gcaccttaccctaactaatgacgatc 45363262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 20565057 - 20564956
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  20565057 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 20564961  T
Q  127 cgatc 131  Q
    |||||    
T  20564960 cgatc 20564956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 17839643 - 17839521
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||||||||||||    
T  17839643 aggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaat 17839547  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  17839546 gcaccttaccctaactaatgacgatc 17839521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 40588849 - 40588746
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatg 125  Q
    ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||||| |||||||| | |||||    
T  40588849 gcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatgcaccttaccctgactaatg 40588752  T
Q  126 acgatc 131  Q
    ||||||    
T  40588751 acgatc 40588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 34139411 - 34139363
Alignment:
Q  83 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  34139411 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatc 34139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 34141314 - 34141414
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| |||    
T  34141314 aggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaat 34141411  T
Q  106 gca 108  Q
    |||    
T  34141412 gca 34141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 28978934 - 28978873
Alignment:
Q  47 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||| ||||||||||||  |||| |||| ||||||||||||||||| ||||||||||||    
T  28978934 ttgtttgacaagtttgaattgacccaattcaaaggtaagacaattgttggagttggaatgca 28978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 41218066 - 41218162
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||| |  ||| ||||||||||| |||| |||| ||||||||||| ||||   ||  |||| ||||||||||||||||||||||||||||||    
T  41218066 aaaacatgaatgacgggggaaatgcttgagtcat-gttgcttggcaagtttaaatttggcccattcaaaggtaagacaattgttgtagttggaatgca 41218162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 2356566 - 2356513
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  2356566 gtttagcaagtttgaatttcc--atttcagaggtaagacaattgttgtagttggaa 2356513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 20378639 - 20378713
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    |||||||||||| ||||||  |||||| |||||||||||||||||||||||||| ||||| |||| |||||| ||||    
T  20378639 caagtttgaattgccccatc-cagagg-aagacaattgttgtagttggaatgcaccttactctaactaatgatgatc 20378713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 26601499 - 26601436
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||||    
T  26601499 tgttgtttggcaagtttgaatttaccccattaaa-aggtaagacaattgttgtacttggaatgca 26601436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 48271140 - 48271193
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  48271140 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 48271193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 1642310 - 1642257
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1642310 tgtttagccagtttgaatttaccccatttcataggtaagacaattgttgtagtt 1642257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 15337623 - 15337567
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||    
T  15337623 tgtttggcaagtttaaatttacctcatt-cagaggtaagacaattgttgtagttggaa 15337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 4230291 - 4230346
Alignment:
Q  44 ttgttgtttggcaagtttgaatt-accccat-ttcagaggtaagacaattgttgta 97  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  4230291 ttgttgtttagcaagtttgaatttaccccaaattcagaggtaagacaattgttgta 4230346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 48270925 - 48270873
Alignment:
Q  52 tggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||||||||||  | | | ||||||||||||||||||||||||    
T  48270925 tggcaagtttgaattaccccatt--aaaagaaagacaattgttgtagttggaatg 48270873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 1642525 - 1642571
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  1642525 caagtttgaatt--cccatttca-aggtaagacaattgttgtagttggaa 1642571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 10224559 - 10224612
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  10224559 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 10224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 20877767 - 20877714
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  20877767 ttggcaagtttgaatttaccccatg-cagaggtaacacaattgttgtagttggaa 20877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 21187014 - 21186961
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  21187014 ttgggaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 21186961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 21651015 - 21651068
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||| | |||||| ||||||||| |||||||||||||||||||    
T  21651015 ttggcaagtttgaatttatcccatt-cagaggtaacacaattgttgtagttggaa 21651068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 20877527 - 20877471
Alignment:
Q  48 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||||| ||| ||||| |||||||||| |||||||||||||||||    
T  20877527 tgtttagcaagtttgaatttacctcattt-agaggtaagataattgttgtagttggaa 20877471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 21614393 - 21614440
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  21614393 caagtttgaattaccccatct-agagg-aagacaattgttgtagttggaa 21614440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 28113869 - 28113813
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  28113869 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 28113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 3380626 - 3380658
Alignment:
Q  72 atttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||| |||||||    
T  3380626 atttcagaggtaagacaattgttgtcgttggaa 3380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 21614506 - 21614447
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  21614506 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 21614447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 28113998 - 28114044
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 103  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  28113998 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 28114044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 28114114 - 28114055
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||| |||||||| |||| |||||| |||||||||| ||||||||    
T  28114114 tgttgcttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttggagttggaa 28114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 30361245 - 30361301
Alignment:
Q  48 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| |||||||||||||  |||  ||||| || ||||||||||||||||||||||    
T  30361245 tgtttagcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaa 30361301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 42683139 - 42683198
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| ||||||||||| || |||||||| || ||||||| |||||||||||||||||    
T  42683139 tgttgtttagcaagtttgaatttgccccattt-agtggtaagataattgttgtagttggaa 42683198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 9366728 - 9366778
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  9366728 caagtttgaattgccccataccag-ggtaagacaattgttgcagttggaatg 9366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 9366860 - 9366779
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  9366860 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 9366779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 15337832 - 15337881
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| |||||    
T  15337832 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttttagtt 15337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 20565226 - 20565307
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  20565226 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 20565307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 20565361 - 20565308
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  20565361 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 20565308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 26601386 - 26601435
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  26601386 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 26601435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 36393751 - 36393804
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||| |||| |||||    
T  36393751 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgtcgtagctggaa 36393804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 39476849 - 39476898
Alignment:
Q  55 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  39476849 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 39476898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 41049063 - 41049010
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  41049063 gttttgcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 41049010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 42735542 - 42735489
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  42735542 gtttggcaagtttgaattaccaca-ttcaaagg-aagacaattgttgtagctggaa 42735489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 43351027 - 43351080
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  43351027 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 43351080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 73; Significance: 9e-34; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 2110 - 1987
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  2110 aggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaatg 2012  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  2011 caccttaccctaactaatgacgatc 1987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 2239 - 2339
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    ||||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| |||    
T  2239 aggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaat 2336  T
Q  106 gca 108  Q
    |||    
T  2337 gca 2339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 69; Significance: 2e-31; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 17803 - 17927
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17803 aggaaaaacatgaatgccgagcgaaatgcttgagtcctaaccgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttgaaatg 17902  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  17903 caccttaccctaactaatgacgatc 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 17671 - 17581
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||| |  ||||||||||||| | |||| ||||||||| |||||| |||| |||||||| || | |||| |||||||||||||||||    
T  17671 aaaacatgaatgccgggcgaaatgcttaagtcat-gttgtttggaaagtttaaatttaccccatt-caaaagtaacacaattgttgtagttgg 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 5e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 3765673 - 3765797
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | || |||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3765673 aggaaaaacatgaatgccgagccaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttgagaggtaagacaattgttgcagttggaatg 3765772  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||| ||||    
T  3765773 caccttaccctaactaatgatgatc 3765797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 35058621 - 35058745
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| || | |||||||||| ||  | | |  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  35058621 aggaaaaacatgaatgtcgagcgaaatgctagagccctggccgtttggcaagtttgaattacccaatttgagaggtaagacaattgttgtagttggaatg 35058720  T
Q  107 catcttaccctaattaatgacgatc 131  Q
     | |||||||||| |||||||||||    
T  35058721 taccttaccctaactaatgacgatc 35058745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 24021023 - 24021106
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgat 130  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  24021023 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgat 24021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 801486 - 801364
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||| |  | ||||||||||||| || | |  |||| |||||||||||||||| |||| || ||| ||||||||||||||||||||||||    
T  801486 aggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttcgcaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatg 801389  T
Q  107 catcttaccctaattaatgacgatc 131  Q
    || |||||||||| |||||||||||    
T  801388 caccttaccctaactaatgacgatc 801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 2192680 - 2192597
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgat 130  Q
    ||||||| | |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  2192680 tgttgttcgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgat 2192597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 27640480 - 27640379
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  27640480 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 27640384  T
Q  127 cgatc 131  Q
    |||||    
T  27640383 cgatc 27640379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6205784 - 6205683
Alignment:
Q  27 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 126  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6205784 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6205688  T
Q  127 cgatc 131  Q
    |||||    
T  6205687 cgatc 6205683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 34134935 - 34134879
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 101  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34134935 tgttgtttagcaagtttgaattattccatttcagaggtaagacaattgttgtagttg 34134879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 11692734 - 11692650
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| |||||||||||    
T  11692734 tgttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatgacgatc 11692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 29066875 - 29066752
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || || ||||| |||||||| |||||||||    
T  29066875 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatatcatt-caaagataagaaaattgttgcagttggaat 29066778  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  29066777 gcaccttaccctaactaatgacgatc 29066752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 29075888 - 29075765
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| |||||||||    
T  29075888 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaat 29075791  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  29075790 gcaccttaccctaactaatgacgatc 29075765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 29108462 - 29108339
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| |||||||||    
T  29108462 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaat 29108365  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  29108364 gcaccttaccctaactaatgacgatc 29108339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 29110860 - 29110737
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| |||||||||    
T  29110860 aggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaat 29110763  T
Q  106 gcatcttaccctaattaatgacgatc 131  Q
    ||| |||||||||| |||||||||||    
T  29110762 gcaccttaccctaactaatgacgatc 29110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 35058456 - 35058393
Alignment:
Q  45 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||  |||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  35058456 tgttgtttggagagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 35058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 30257506 - 30257559
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  30257506 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagctggaa 30257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 801618 - 801710
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| |  ||||||||||||||| || | || |||| || |||||||||| |||||||| || ||||||||||||||||||||||||||    
T  801618 aaaacatgaatgccgggcgaaatgcttgagtcct-gtcgttttgccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 801710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 20192605 - 20192543
Alignment:
Q  43 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20192605 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 20242049 - 20242111
Alignment:
Q  43 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20242049 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20242111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 22136033 - 22136095
Alignment:
Q  43 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22136033 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22136095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 22143386 - 22143448
Alignment:
Q  43 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22143386 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 12397270 - 12397321
Alignment:
Q  51 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 102  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  12397270 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgg 12397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 14482746 - 14482806
Alignment:
Q  45 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| ||||||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  14482746 tgttgtttagcaagtttgaaattacccaaattcagaggcaagacaattgttgtagtgggaa 14482806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 17465287 - 17465319
Alignment:
Q  72 atttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||||||||||||    
T  17465287 atttcagaggtaagacaattgttgtagttggaa 17465319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 6205953 - 6206034
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  6205953 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 6206034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 13402815 - 13402762
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  13402815 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 13402762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 4495397 - 4495446
Alignment:
Q  51 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  4495397 ttggcaagtttgaattgacccca-ttcagaggtaacacaattgttgtagtt 4495446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 13403313 - 13403362
Alignment:
Q  55 caagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  13403313 caagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 13403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 14123099 - 14123152
Alignment:
Q  55 caagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  14123099 caagtttgaatttaccccatttaa-aggtaagacaatttttgtagttggaatgca 14123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 14123421 - 14123470
Alignment:
Q  54 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||  |||||| |||||| ||||||||||||||||||||||    
T  14123421 gcaagtttgaatttgcccatt-cagaggcaagacaattgttgtagttggaa 14123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29067007 - 29067103
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29067007 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29108594 - 29108690
Alignment:
Q  11 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29108594 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 4495615 - 4495671
Alignment:
Q  48 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  4495615 tgtttagcaagtttgaatttacccca-ttcagaggtaagacaattattgcagttggaa 4495671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 14115313 - 14115262
Alignment:
Q  51 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  14115313 ttggcaagtttgaattaccctatttaa-agg-aagacaattgttgtagttggaa 14115262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 11692920 - 11693001
Alignment:
Q  26 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  11692920 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 11693001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 27640667 - 27640729
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 108  Q
    |||||||| ||| |||||||||| | |||| || |||||| ||||||||||| |||||||||||    
T  27640667 tgttgttttgcaggtttgaattatctcatt-caaaggtaacacaattgttgtggttggaatgca 27640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 32027555 - 32027608
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 104  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  32027555 gtttggcatgtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 32027608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 55; Significance: 5e-23; HSPs: 2)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 2403 - 2503
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 105  Q
    |||||||||||||| |  ||||||||||||||| || ||||| ||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  2403 aggaaaaacatgaatgccgggcgaaatgcttgagtc-ttgttttttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 2500  T
Q  106 gca 108  Q
    |||    
T  2501 gca 2503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 2233 - 2200
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggt 82  Q
    |||||| |||||||||||||||||||||||||||    
T  2233 gtttggaaagtttgaattaccccatttcagaggt 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 2e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 85607 - 85524
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgat 130  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  85607 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgat 85524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 14749 - 14665
Alignment:
Q  45 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  14749 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcacgttaccctaactaacgacgatc 14665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 64226 - 64146
Alignment:
Q  49 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatc 131  Q
    ||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||| | |||||||||  |||||||||||    
T  64226 gtttggcaagtttgaattacttcatt-caaagg-aagacaattgttgtagttggaatgtaccttaccctacctaatgacgatc 64146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 1169 - 1199
Alignment:
Q  70 ccatttcagaggtaagacaattgttgtagtt 100  Q
    |||||||||||||||||||||||||||||||    
T  1169 ccatttcagaggtaagacaattgttgtagtt 1199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1700 (Bit Score: 29; Significance: 0.0000002; HSPs: 2)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 47 - 114
Alignment:
Q  7 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatt 74  Q
    |||||||||||||| || ||||||||||||||| ||  |||||||| || |||||||| ||||||||||    
T  47 aggaaaaacatgaatgtcgggcgaaatgcttgagtc-ctgttgtttcgccagtttgaatttaccccatt 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1700; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 384 - 436
Alignment:
Q  54 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 106  Q
    |||||||||||||  |||  ||||| || ||||||||||||||||||||||||    
T  384 gcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaatg 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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