View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5831-5 (Length: 157)
Name: Solexa-NF5831-5
Description: NF5831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5831-5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 6e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 6e-60
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 37131731 - 37131590
Alignment:
| Q |
8 |
acgttggtgcagcgtctcaaggagacaataacatacggaacaagcaatcatttttacatttgatcgtattttgtgtttggatctatctactctttgtcat |
107 |
Q |
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| T |
37131731 |
acgttggtgcagcgtctcaaggagacaataacatacggaacaagcaatcatttttacatttgatcgtattttgtgtttggatctatctactctttgtcat |
37131632 |
T |
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| Q |
108 |
agtacaggcctacagggtatgtttctcaacacgtgacgccgaagctccat |
157 |
Q |
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| T |
37131631 |
agta--------cagggtatgtttctcaacacgtgaccccgaagctccat |
37131590 |
T |
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