View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5835-8 (Length: 143)

Name: Solexa-NF5835-8
Description: NF5835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5835-8
Solexa-NF5835-8
[»] chr7 (43 HSPs)
chr7 (3-128)||(9193371-9193496)
chr7 (92-143)||(17947439-17947490)
chr7 (92-143)||(537589-537640)
chr7 (92-143)||(544463-544514)
chr7 (92-143)||(821951-822002)
chr7 (92-143)||(826964-827015)
chr7 (92-143)||(828975-829026)
chr7 (92-143)||(8779784-8779835)
chr7 (92-143)||(8786623-8786674)
chr7 (92-143)||(9005286-9005337)
chr7 (92-143)||(9010312-9010363)
chr7 (92-143)||(9193222-9193273)
chr7 (92-143)||(13372264-13372315)
chr7 (92-143)||(13734781-13734832)
chr7 (92-143)||(14229280-14229331)
chr7 (92-143)||(15463637-15463688)
chr7 (92-143)||(16330214-16330265)
chr7 (92-143)||(19365111-19365162)
chr7 (92-143)||(23204507-23204558)
chr7 (92-143)||(23510634-23510685)
chr7 (92-143)||(23516416-23516467)
chr7 (92-143)||(41723415-41723466)
chr7 (92-143)||(48354904-48354955)
chr7 (102-143)||(15458086-15458127)
chr7 (91-143)||(4460137-4460189)
chr7 (91-143)||(8713703-8713755)
chr7 (91-143)||(18390374-18390426)
chr7 (91-143)||(30061394-30061446)
chr7 (92-143)||(320347-320398)
chr7 (92-143)||(648118-648169)
chr7 (92-143)||(782104-782155)
chr7 (92-143)||(3196757-3196808)
chr7 (91-134)||(4465991-4466034)
chr7 (92-143)||(5398432-5398483)
chr7 (92-143)||(5841379-5841430)
chr7 (92-143)||(14941075-14941126)
chr7 (92-143)||(15368668-15368719)
chr7 (92-143)||(18918698-18918749)
chr7 (92-143)||(19013967-19014018)
chr7 (92-143)||(33611592-33611643)
chr7 (2-53)||(33611687-33611737)
chr7 (92-143)||(38387491-38387542)
chr7 (92-143)||(41107399-41107450)
[»] chr4 (27 HSPs)
chr4 (40-143)||(38652796-38652899)
chr4 (6-143)||(11901962-11902098)
chr4 (91-143)||(8561659-8561711)
chr4 (92-143)||(3392654-3392705)
chr4 (92-143)||(6519079-6519130)
chr4 (92-143)||(14652815-14652866)
chr4 (92-143)||(15346414-15346465)
chr4 (92-143)||(16952559-16952610)
chr4 (92-143)||(18079393-18079444)
chr4 (92-143)||(24124569-24124620)
chr4 (91-143)||(3355973-3356025)
chr4 (91-143)||(20618368-20618420)
chr4 (91-143)||(31594568-31594620)
chr4 (92-143)||(5676167-5676217)
chr4 (92-143)||(5718104-5718155)
chr4 (92-143)||(11888312-11888363)
chr4 (92-143)||(12845623-12845674)
chr4 (92-139)||(14690168-14690215)
chr4 (92-143)||(15433104-15433155)
chr4 (100-143)||(18080274-18080317)
chr4 (92-143)||(18287711-18287762)
chr4 (92-143)||(36515311-36515362)
chr4 (92-143)||(36653675-36653726)
chr4 (100-143)||(40559914-40559957)
chr4 (92-143)||(42708548-42708599)
chr4 (92-143)||(45237664-45237715)
chr4 (92-143)||(55799055-55799106)
[»] chr3 (42 HSPs)
chr3 (2-80)||(22039444-22039520)
chr3 (92-143)||(26169608-26169659)
chr3 (92-143)||(1991527-1991578)
chr3 (92-143)||(3244403-3244454)
chr3 (92-143)||(3249534-3249585)
chr3 (92-143)||(10601293-10601344)
chr3 (92-143)||(16384779-16384830)
chr3 (92-143)||(34052930-34052981)
chr3 (94-143)||(8685192-8685241)
chr3 (91-143)||(20151201-20151253)
chr3 (92-143)||(2722656-2722707)
chr3 (92-143)||(2781957-2782008)
chr3 (92-143)||(6237547-6237598)
chr3 (92-143)||(10607605-10607656)
chr3 (92-143)||(14494142-14494193)
chr3 (92-143)||(14660124-14660175)
chr3 (92-143)||(15430569-15430620)
chr3 (92-143)||(17051431-17051482)
chr3 (92-143)||(40847167-40847218)
chr3 (92-143)||(43496909-43496960)
chr3 (91-143)||(11577097-11577149)
chr3 (91-139)||(11848224-11848272)
chr3 (91-143)||(11867523-11867575)
chr3 (91-143)||(16336587-16336639)
chr3 (91-143)||(18973271-18973323)
chr3 (91-143)||(20155649-20155701)
chr3 (92-143)||(3234162-3234213)
chr3 (100-143)||(4384102-4384145)
chr3 (92-143)||(4830767-4830818)
chr3 (92-143)||(6810383-6810434)
chr3 (92-143)||(6816205-6816256)
chr3 (92-143)||(10249631-10249682)
chr3 (92-143)||(11399566-11399616)
chr3 (92-143)||(12247521-12247572)
chr3 (92-143)||(13088239-13088290)
chr3 (92-143)||(13099029-13099080)
chr3 (92-143)||(15854924-15854975)
chr3 (92-143)||(17405509-17405560)
chr3 (92-143)||(22169344-22169395)
chr3 (92-143)||(24697567-24697617)
chr3 (92-143)||(25055718-25055769)
chr3 (92-143)||(43841384-43841435)
[»] chr1 (29 HSPs)
chr1 (2-40)||(16147889-16147927)
chr1 (92-143)||(16384302-16384353)
chr1 (92-143)||(17987269-17987320)
chr1 (92-143)||(18379560-18379611)
chr1 (92-143)||(48257124-48257175)
chr1 (92-143)||(2386939-2386990)
chr1 (95-142)||(8649592-8649639)
chr1 (92-143)||(13251397-13251448)
chr1 (92-143)||(16432307-16432358)
chr1 (92-143)||(17717460-17717511)
chr1 (92-143)||(20412950-20413001)
chr1 (92-143)||(23289325-23289376)
chr1 (92-143)||(26133677-26133728)
chr1 (93-143)||(21240767-21240817)
chr1 (94-143)||(41228994-41229043)
chr1 (91-143)||(20449093-20449145)
chr1 (91-143)||(20534859-20534911)
chr1 (91-143)||(28205670-28205722)
chr1 (92-143)||(16354777-16354828)
chr1 (92-139)||(17612401-17612448)
chr1 (92-143)||(20405412-20405463)
chr1 (92-143)||(21791682-21791733)
chr1 (92-143)||(22142128-22142179)
chr1 (92-143)||(22314726-22314777)
chr1 (92-143)||(22635056-22635107)
chr1 (100-131)||(41802975-41803006)
chr1 (92-127)||(44538898-44538933)
chr1 (92-143)||(50019797-50019848)
chr1 (92-143)||(52235336-52235387)
[»] chr5 (28 HSPs)
chr5 (94-143)||(20915328-20915377)
chr5 (91-143)||(25485756-25485808)
chr5 (2-37)||(20738950-20738985)
chr5 (92-143)||(25576976-25577027)
chr5 (92-143)||(34781021-34781072)
chr5 (92-143)||(42789162-42789213)
chr5 (92-143)||(18483029-18483080)
chr5 (92-143)||(18612617-18612668)
chr5 (92-143)||(20831799-20831850)
chr5 (92-142)||(17408074-17408124)
chr5 (91-143)||(19890431-19890483)
chr5 (91-143)||(20167530-20167582)
chr5 (91-143)||(20594650-20594702)
chr5 (91-143)||(20600936-20600988)
chr5 (91-143)||(20607227-20607279)
chr5 (91-143)||(20613564-20613616)
chr5 (91-143)||(23028938-23028990)
chr5 (91-143)||(23342860-23342912)
chr5 (91-143)||(23771640-23771692)
chr5 (91-143)||(28834228-28834280)
chr5 (92-143)||(20799893-20799944)
chr5 (100-143)||(20968436-20968479)
chr5 (92-143)||(21999855-21999906)
chr5 (92-143)||(24165944-24165995)
chr5 (92-143)||(24936189-24936240)
chr5 (92-143)||(24941881-24941932)
chr5 (92-143)||(31057040-31057091)
chr5 (3-38)||(31757583-31757618)
[»] scaffold0673 (1 HSPs)
scaffold0673 (92-143)||(2544-2595)
[»] scaffold0450 (1 HSPs)
scaffold0450 (92-143)||(126-177)
[»] scaffold0175 (1 HSPs)
scaffold0175 (92-143)||(11946-11997)
[»] scaffold0142 (1 HSPs)
scaffold0142 (92-143)||(24586-24637)
[»] scaffold0022 (2 HSPs)
scaffold0022 (92-143)||(53508-53559)
scaffold0022 (92-143)||(32702-32753)
[»] scaffold0021 (1 HSPs)
scaffold0021 (92-143)||(13666-13717)
[»] chr8 (29 HSPs)
chr8 (92-143)||(14350974-14351025)
chr8 (92-143)||(23694472-23694523)
chr8 (92-143)||(24967952-24968003)
chr8 (56-143)||(19791573-19791662)
chr8 (91-143)||(1989831-1989883)
chr8 (91-143)||(22725164-22725216)
chr8 (92-143)||(9318543-9318594)
chr8 (92-143)||(14877666-14877717)
chr8 (92-143)||(17515204-17515255)
chr8 (92-139)||(18162715-18162762)
chr8 (92-143)||(19998098-19998149)
chr8 (92-143)||(20043459-20043510)
chr8 (92-143)||(22994422-22994473)
chr8 (92-143)||(23227639-23227690)
chr8 (92-143)||(29336168-29336219)
chr8 (92-143)||(37818445-37818496)
chr8 (2-43)||(6280355-6280396)
chr8 (102-143)||(20037811-20037852)
chr8 (91-143)||(1686372-1686424)
chr8 (91-143)||(21102956-21103008)
chr8 (91-143)||(22554827-22554879)
chr8 (92-143)||(17616314-17616365)
chr8 (92-143)||(18959875-18959926)
chr8 (92-143)||(25229347-25229398)
chr8 (92-143)||(25397650-25397701)
chr8 (92-143)||(25733979-25734030)
chr8 (92-143)||(25751025-25751076)
chr8 (92-143)||(29326010-29326061)
chr8 (100-143)||(33633155-33633198)
[»] chr6 (34 HSPs)
chr6 (92-143)||(4188854-4188905)
chr6 (92-143)||(12656652-12656703)
chr6 (92-143)||(19074670-19074721)
chr6 (92-143)||(17744150-17744201)
chr6 (92-139)||(18449464-18449511)
chr6 (2-37)||(18628040-18628075)
chr6 (92-143)||(19569500-19569551)
chr6 (92-143)||(20465065-20465116)
chr6 (92-143)||(22006475-22006526)
chr6 (92-143)||(23493011-23493062)
chr6 (92-143)||(23602621-23602672)
chr6 (92-143)||(25950021-25950072)
chr6 (92-143)||(26139363-26139414)
chr6 (93-143)||(21322817-21322867)
chr6 (92-133)||(26018659-26018700)
chr6 (91-143)||(22060333-22060385)
chr6 (91-143)||(22071414-22071466)
chr6 (91-143)||(27565217-27565269)
chr6 (92-143)||(1176792-1176843)
chr6 (91-134)||(6795637-6795680)
chr6 (92-143)||(11228621-11228672)
chr6 (92-143)||(12473871-12473922)
chr6 (92-143)||(17283372-17283423)
chr6 (100-143)||(19269782-19269825)
chr6 (2-37)||(19612179-19612214)
chr6 (92-143)||(24219440-24219491)
chr6 (92-143)||(25401789-25401840)
chr6 (92-143)||(25622977-25623028)
chr6 (104-143)||(25964632-25964671)
chr6 (104-143)||(25969279-25969318)
chr6 (104-143)||(25973719-25973758)
chr6 (2-41)||(31964959-31964997)
chr6 (92-143)||(35060056-35060107)
chr6 (92-143)||(35243691-35243742)
[»] chr2 (21 HSPs)
chr2 (2-143)||(24365656-24365800)
chr2 (91-143)||(23084200-23084252)
chr2 (92-143)||(20282824-20282875)
chr2 (92-143)||(20312057-20312108)
chr2 (92-143)||(36684993-36685044)
chr2 (92-143)||(44998935-44998986)
chr2 (93-143)||(19012357-19012407)
chr2 (91-143)||(18942359-18942411)
chr2 (91-143)||(20376587-20376639)
chr2 (91-143)||(35081311-35081363)
chr2 (91-143)||(44370889-44370941)
chr2 (100-143)||(539890-539933)
chr2 (92-143)||(7942376-7942427)
chr2 (92-139)||(21467773-21467820)
chr2 (2-53)||(23084295-23084345)
chr2 (92-143)||(23341263-23341314)
chr2 (92-143)||(23800229-23800280)
chr2 (92-143)||(24507996-24508047)
chr2 (92-143)||(24819933-24819984)
chr2 (92-143)||(24824318-24824369)
chr2 (3-38)||(31590019-31590054)
[»] scaffold1496 (1 HSPs)
scaffold1496 (92-143)||(1686-1737)
[»] scaffold0713 (1 HSPs)
scaffold0713 (92-143)||(6042-6093)
[»] scaffold0471 (1 HSPs)
scaffold0471 (92-143)||(9157-9208)
[»] scaffold0388 (1 HSPs)
scaffold0388 (92-143)||(16304-16355)
[»] scaffold0251 (1 HSPs)
scaffold0251 (92-143)||(18259-18310)
[»] scaffold0218 (1 HSPs)
scaffold0218 (92-143)||(16947-16998)
[»] scaffold0213 (1 HSPs)
scaffold0213 (92-143)||(15961-16012)
[»] scaffold0211 (1 HSPs)
scaffold0211 (92-143)||(16889-16940)
[»] scaffold0125 (1 HSPs)
scaffold0125 (92-143)||(43356-43407)
[»] scaffold0113 (2 HSPs)
scaffold0113 (92-143)||(745-796)
scaffold0113 (91-143)||(42831-42883)
[»] scaffold0098 (2 HSPs)
scaffold0098 (2-37)||(4253-4288)
scaffold0098 (91-143)||(43648-43700)
[»] scaffold0093 (1 HSPs)
scaffold0093 (92-143)||(27625-27676)
[»] scaffold0081 (1 HSPs)
scaffold0081 (92-143)||(51094-51145)
[»] scaffold0071 (1 HSPs)
scaffold0071 (92-143)||(31618-31669)
[»] scaffold0026 (1 HSPs)
scaffold0026 (92-143)||(135053-135104)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-37)||(175515-175550)
[»] scaffold0005 (1 HSPs)
scaffold0005 (92-143)||(164426-164477)
[»] scaffold0003 (1 HSPs)
scaffold0003 (92-143)||(94179-94230)
[»] scaffold0001 (2 HSPs)
scaffold0001 (100-143)||(182020-182063)
scaffold0001 (91-143)||(81958-82010)
[»] scaffold0012 (2 HSPs)
scaffold0012 (93-143)||(102732-102782)
scaffold0012 (91-143)||(2914-2966)
[»] scaffold0275 (1 HSPs)
scaffold0275 (94-143)||(1154-1203)
[»] scaffold0031 (3 HSPs)
scaffold0031 (92-141)||(78555-78604)
scaffold0031 (92-143)||(17265-17316)
scaffold0031 (92-143)||(23971-24022)
[»] scaffold1323 (1 HSPs)
scaffold1323 (91-143)||(3-55)
[»] scaffold1124 (1 HSPs)
scaffold1124 (91-143)||(1302-1354)
[»] scaffold0566 (1 HSPs)
scaffold0566 (91-143)||(3947-3999)
[»] scaffold0440 (1 HSPs)
scaffold0440 (91-143)||(109-161)
[»] scaffold0292 (2 HSPs)
scaffold0292 (91-143)||(2042-2094)
scaffold0292 (91-143)||(9079-9131)
[»] scaffold1403 (1 HSPs)
scaffold1403 (92-143)||(1698-1749)
[»] scaffold0894 (1 HSPs)
scaffold0894 (92-143)||(1737-1788)
[»] scaffold0816 (1 HSPs)
scaffold0816 (92-143)||(649-700)
[»] scaffold0741 (1 HSPs)
scaffold0741 (92-139)||(2362-2409)
[»] scaffold0532 (1 HSPs)
scaffold0532 (92-143)||(4447-4498)
[»] scaffold0447 (2 HSPs)
scaffold0447 (92-143)||(7112-7163)
scaffold0447 (92-143)||(11726-11777)
[»] scaffold0383 (1 HSPs)
scaffold0383 (92-143)||(9721-9772)
[»] scaffold0360 (1 HSPs)
scaffold0360 (92-143)||(5452-5503)
[»] scaffold0301 (1 HSPs)
scaffold0301 (92-143)||(1668-1719)
[»] scaffold0273 (1 HSPs)
scaffold0273 (92-143)||(18792-18843)
[»] scaffold0266 (1 HSPs)
scaffold0266 (92-143)||(21664-21715)
[»] scaffold0220 (1 HSPs)
scaffold0220 (92-143)||(3484-3535)
[»] scaffold0096 (1 HSPs)
scaffold0096 (92-143)||(37357-37408)
[»] scaffold0084 (1 HSPs)
scaffold0084 (92-143)||(44570-44621)
[»] scaffold0064 (1 HSPs)
scaffold0064 (104-143)||(49515-49554)
[»] scaffold0046 (1 HSPs)
scaffold0046 (100-143)||(21176-21219)
[»] scaffold0037 (1 HSPs)
scaffold0037 (92-143)||(49105-49156)
[»] scaffold0035 (1 HSPs)
scaffold0035 (92-143)||(49353-49404)
[»] scaffold0032 (1 HSPs)
scaffold0032 (92-143)||(118439-118490)
[»] scaffold0018 (2 HSPs)
scaffold0018 (92-143)||(11907-11958)
scaffold0018 (92-143)||(18099-18150)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 2e-41; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 9193496 - 9193371
Alignment:
Q  3 gatgaaccaataatctcaaggcgttttttattattactattgttattttctagaccgttaaaaatcacaactttataatttaattttgttctaatcctta 102  Q
    ||||||||||||||| ||||||  |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  9193496 gatgaaccaataatcacaaggctctttttattattattattattattttctaaaccgttaaaaatcacaactttataatttaatcttcttctaatcctta 9193397  T
Q  103 ttaaaagttaatcgaattcataactc 128  Q
    || ||||||||| |||||||||||||    
T  9193396 ttgaaagttaattgaattcataactc 9193371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17947439 - 17947490
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| ||||||||||||||||||| ||||||||    
T  17947439 tctaatcattgttaaaagttaattgaattcataactccatgtcggaacgata 17947490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 537640 - 537589
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  537640 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 537589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 544514 - 544463
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  544514 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 544463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 821951 - 822002
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  821951 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 822002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 826964 - 827015
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  826964 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 827015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 828975 - 829026
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  828975 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 829026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 8779835 - 8779784
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  8779835 tctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 8779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 8786674 - 8786623
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||| ||||||| |||||||    
T  8786674 tctaatcattgttaaaagttaattgaattcataactacatgtcataacgata 8786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 9005286 - 9005337
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||  ||||||||    
T  9005286 tctaatcattattaaaagttaattgaattcataactccctgttggaacgata 9005337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 9010312 - 9010363
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  9010312 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 9010363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 9193222 - 9193273
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  9193222 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 9193273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 13372264 - 13372315
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  13372264 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 13372315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 13734781 - 13734832
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  13734781 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 13734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14229331 - 14229280
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  14229331 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 14229280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15463637 - 15463688
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  15463637 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 15463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16330265 - 16330214
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  16330265 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 16330214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 19365111 - 19365162
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||||||||||||    
T  19365111 tctaatcattatctaaagttaattgaattcataactccctgtcagaacgata 19365162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23204507 - 23204558
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  23204507 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 23204558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23510634 - 23510685
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  23510634 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 23510685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23516416 - 23516467
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  23516416 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 23516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 41723415 - 41723466
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  41723415 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 41723466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 48354955 - 48354904
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  ||||||||||||||||||| ||||||||    
T  48354955 tctaatcattgttaaaagttaactgaattcataactccatgtcggaacgata 48354904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 15458086 - 15458127
Alignment:
Q  102 attaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||| |||||||||||||| |||| ||||||||    
T  15458086 attaaaagttaattgaattcataactccctgtcggaacgata 15458127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 4460189 - 4460137
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || || ||||||||| |||||||||||||| |||| ||||||||    
T  4460189 ttctaatcattgttgaaagttaattgaattcataactccctgtcggaacgata 4460137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 8713703 - 8713755
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  8713703 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 8713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 18390374 - 18390426
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  18390374 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 18390426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 30061446 - 30061394
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||| ||||||| |||||||||||||| |||| ||||||||    
T  30061446 ttctaatcattgttaagagttaattgaattcataactccctgtcggaacgata 30061394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 320347 - 320398
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  320347 tctaatcattatctaaagttaattgaattcataactccttgtcggaacgata 320398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 648169 - 648118
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| || ||||||||| |||||| ||||||||    
T  648169 tctaatcattgttaaaagttaattgagttcataacttcatgtcggaacgata 648118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 782155 - 782104
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  782155 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 782104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 3196808 - 3196757
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | ||||||||||||||  ||| ||||||||    
T  3196808 tctaatcattattaaaagttacttgaattcataactcccagtcggaacgata 3196757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 4466034 - 4465991
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtc 134  Q
    |||||||| || ||||||| |||| |||||||||||||||||||    
T  4466034 ttctaatcattgttaaaagataattgaattcataactccatgtc 4465991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 5398432 - 5398483
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| |  ||||||||||||| |||| ||||||||    
T  5398432 tctaatcattattaaaagttacttcaattcataactccctgtcggaacgata 5398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 5841379 - 5841430
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||  |||| ||||||||    
T  5841379 tctaatcatcattaaaagttaattgaattcataactctctgtcggaacgata 5841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14941126 - 14941075
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| | || ||||||||    
T  14941126 tctaatcattatttaaagttaattgaattcataactccctatcggaacgata 14941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15368719 - 15368668
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| | || ||||||||    
T  15368719 tctaatcattatttaaagttaattgaattcataactccctatcggaacgata 15368668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 18918698 - 18918749
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  18918698 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 18918749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 19014018 - 19013967
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  19014018 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 19013967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 33611643 - 33611592
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| || |||||| |||||||||||||| |||| ||||||||    
T  33611643 tctaatcattatttaaggttaattgaattcataactccctgtcggaacgata 33611592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 33611737 - 33611687
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattattactattgttattttct 53  Q
    |||||||||||||||| ||||||  |||||||| ||| ||||||||||||||    
T  33611737 agatgaaccaataatcccaaggctctttttatt-ttattattgttattttct 33611687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 38387542 - 38387491
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||  ||||||||    
T  38387542 tctaatcattatttaaagttaattgaattcataactccctgttggaacgata 38387491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 41107450 - 41107399
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  41107450 tctaatcattatctaaagttaattgaattcataactccttgtcggaacgata 41107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 1e-30; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 38652796 - 38652899
Alignment:
Q  40 tattgttattttctagaccgttaaaaatcacaactttataatttaattttgttctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||| |||||| ||||    
T  38652796 tattattattttctaaaccattaaaaatcacaactttataatttaactttcttctaatccttattgaaagttaattgaattcataacttcatgtcggaac 38652895  T
Q  140 gata 143  Q
    ||||    
T  38652896 gata 38652899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 11902098 - 11901962
Alignment:
Q  6 gaaccaataatctcaaggcgttttttattattactattgttattttctagaccgttaaaaatcacaactttataattt--aattttgttctaatccttat 103  Q
    |||||||||||| |||||||  ||||  ||||| ||||||||||||| |  | ||||||||||  ||||||||||| |  |||| |  ||||||| ||||    
T  11902098 gaaccaataatcccaaggcgcctttt--tattattattgttattttc-attcagttaaaaatccaaactttataatctcaaattctcatctaatcattat 11902002  T
Q  104 taaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    | ||||||||| ||||||||||||| ||||| ||||||||    
T  11902001 ttaaagttaattgaattcataactctatgtcggaacgata 11901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 8561711 - 8561659
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || || ||||||||| ||||||||||||||||||| ||||||||    
T  8561711 ttctaatcattgttgaaagttaattgaattcataactccatgtcggaacgata 8561659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 3392654 - 3392705
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  3392654 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 3392705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 6519079 - 6519130
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  6519079 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 6519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14652866 - 14652815
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||| |||| ||||||||    
T  14652866 tctaatcattattaaaagttacttgaattcataactccctgtcggaacgata 14652815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15346465 - 15346414
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||| |||| ||||||||    
T  15346465 tctaatcattattaaaagttacttgaattcataactccctgtcggaacgata 15346414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 16952559 - 16952610
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  16952559 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 16952610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 18079393 - 18079444
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  18079393 tctaatcgtcattaaaagttaattgaattcataactccctgtcggaacgata 18079444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 24124620 - 24124569
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  24124620 tctaatcattatttaaagttaattgaattcataactccttgtcggaacgata 24124569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 3355973 - 3356025
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  3355973 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 3356025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20618368 - 20618420
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20618368 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20618420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 31594568 - 31594620
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||||||||  |||||| |||||| |||||||||||||    
T  31594568 ttctaatcattgttaaaagttaattaaattcaaaactccctgtcagaacgata 31594620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 5676167 - 5676217
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||| ||| ||||||||| |||||||||||||| |||||||| ||||    
T  5676167 tctaatcct-attgaaagttaattgaattcataactccctgtcagaatgata 5676217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 5718104 - 5718155
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  5718104 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 5718155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 11888363 - 11888312
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| |||||||||  ||||||||||||| |||| ||||||||    
T  11888363 tctaatcattatttaaagttaattaaattcataactccctgtcggaacgata 11888312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 12845623 - 12845674
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  12845623 tctaatcattgttaaaagttaactgaattcataactccctgtcggaacgata 12845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 14690215 - 14690168
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| ||||||||||||| | |||||||||||||| ||| |||||    
T  14690215 tctaatcattattaaaagttacttgaattcataactccctgttagaac 14690168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15433155 - 15433104
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||  ||||||||    
T  15433155 tctaatcatcattaaaagttaattgaattcataactccctgtaggaacgata 15433104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 18080317 - 18080274
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  18080317 ttatttaaagttaattgaattcataactccttgtcggaacgata 18080274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 18287711 - 18287762
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  18287711 tctaatcattatgtaaagttaattgaattcataactccctgtcggaacgata 18287762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 36515362 - 36515311
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| ||| |||||||||| |||| ||||||||    
T  36515362 tctaatcatcattaaaagttaattgaaatcataactccctgtcggaacgata 36515311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 36653726 - 36653675
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  36653726 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 36653675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 40559957 - 40559914
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||||| |||||||||||||| ||||  |||||||    
T  40559957 ttattaaaagttaattgaattcataactccctgtcgaaacgata 40559914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 42708599 - 42708548
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  42708599 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 42708548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 45237715 - 45237664
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  45237715 tctaatcattgttaaaagttaactgaattcataactccctgtcggaacgata 45237664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 55799055 - 55799106
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  55799055 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 55799106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 1e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22039444 - 22039520
Alignment:
Q  2 agatgaaccaataatctcaaggcg-ttttttattattactattgttattttctagaccgttaaaaatcacaactttataa 80  Q
    |||||||||||||||| |||| || |||||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  22039444 agatgaaccaataatcacaagacgcttttttattattact---gttattttctaaaccgttaaaaatcacaactttataa 22039520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 26169659 - 26169608
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  26169659 tctaatcattattaaaagttaattgaattcataactccatgtcggaacgata 26169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 1991527 - 1991578
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||| ||||| |||||||||||||    
T  1991527 tctaatcattattaaaagttaattgaattcattactccctgtcagaacgata 1991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 3244454 - 3244403
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  3244454 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 3244403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 3249585 - 3249534
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  3249585 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 3249534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 10601344 - 10601293
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  10601344 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 10601293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16384830 - 16384779
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| | |||||||||||    
T  16384830 tctaatcattattaaaagttaattgaattcataactccctatcagaacgata 16384779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 34052981 - 34052930
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  34052981 tctaatcattatttaaagttaattgaattcataactccatgtcggaacgata 34052930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 8685241 - 8685192
Alignment:
Q  94 taatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||    
T  8685241 taatccttattgaaagttaattgaattcataactctatgtctgaacgata 8685192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20151201 - 20151253
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  20151201 ttctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 20151253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 2722656 - 2722707
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  2722656 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 2722707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 2781957 - 2782008
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  2781957 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 2782008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 6237547 - 6237598
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  6237547 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 6237598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 10607656 - 10607605
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||  |||| ||||||||    
T  10607656 tctaatcattattaaaagttaattgaattcataactctctgtcggaacgata 10607605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14494193 - 14494142
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  14494193 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 14494142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14660175 - 14660124
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  14660175 tctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 14660124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15430569 - 15430620
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  15430569 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 15430620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17051431 - 17051482
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||  ||||||||    
T  17051431 tctaatcattattaaaagttaattgaattcataactccctgttggaacgata 17051482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 40847167 - 40847218
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| ||||||||||||| ||||| ||||||||    
T  40847167 tctaatcattcttaaaagttaattgaattcataactcgatgtcggaacgata 40847218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 43496909 - 43496960
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  43496909 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 43496960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11577149 - 11577097
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||| |||||| |||||||||||||  |||||||||||||    
T  11577149 ttctaatcattgttaaacgttaattgaattcataactcactgtcagaacgata 11577097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 11848272 - 11848224
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    |||||||| || |||||||||||| |||||||||||||| |||| ||||    
T  11848272 ttctaatcattgttaaaagttaattgaattcataactccttgtcggaac 11848224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 11867523 - 11867575
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  11867523 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 11867575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 16336587 - 16336639
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  16336587 ttctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 16336639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 18973323 - 18973271
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  18973323 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 18973271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20155649 - 20155701
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| | ||||||||||||| ||||| |||||||| |||| ||||||||    
T  20155649 ttctaatcatcattaaaagttaattgaatttataactccttgtcggaacgata 20155701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 3234162 - 3234213
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  3234162 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 3234213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 4384102 - 4384145
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  4384102 ttatttaaagttaattgaattcataactccttgtcggaacgata 4384145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 4830767 - 4830818
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  4830767 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 4830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 6810383 - 6810434
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  6810383 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 6810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 6816205 - 6816256
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  6816205 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 6816256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 10249631 - 10249682
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  10249631 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 10249682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 11399566 - 11399616
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| |||||||| |||||| |||||||||||||| |||| ||||||||    
T  11399566 tctaatcattattaaa-gttaattgaattcataactccctgtcggaacgata 11399616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 12247521 - 12247572
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  12247521 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 12247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 13088239 - 13088290
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| |||||| || |||||||||||||| |||| ||||||||    
T  13088239 tctaatcattatttaaagttgattgaattcataactccctgtcggaacgata 13088290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 13099029 - 13099080
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| |||||| || |||||||||||||| |||| ||||||||    
T  13099029 tctaatcattatttaaagttgattgaattcataactccctgtcggaacgata 13099080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15854924 - 15854975
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  15854924 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 15854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 17405560 - 17405509
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  17405560 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 17405509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 22169395 - 22169344
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  22169395 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 22169344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24697567 - 24697617
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  24697567 tctaatcgtcattaaaagttaattgaattcataactcc-tgtcggaacgata 24697617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25055718 - 25055769
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || || ||||||||| |||||||||||||| |||| ||||||||    
T  25055718 tctaatcattgttgaaagttaattgaattcataactccttgtcggaacgata 25055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 43841435 - 43841384
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| | ||||||    
T  43841435 tctaatcattatttaaagttaattgaattcataactccctgtcggcacgata 43841384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 16147927 - 16147889
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattattact 40  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16147927 agatgaaccaataatctcaaggcgttttttattattact 16147889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16384353 - 16384302
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||| ||||||||||||||||||||||| ||||||||    
T  16384353 tctaatcattgttaaaagtaaatcgaattcataactccatgtcggaacgata 16384302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17987269 - 17987320
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  17987269 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 17987320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 18379611 - 18379560
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  18379611 tctaatcattattaaaagttaattgaattcataactccacgtcggaacgata 18379560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 48257124 - 48257175
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  48257124 tctaatcattatttaaagttaattgaattcataactccatgtcggaacgata 48257175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 2386939 - 2386990
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  2386939 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 2386990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 8649592 - 8649639
Alignment:
Q  95 aatccttattaaaagttaatcgaattcataactccatgtcagaacgat 142  Q
    |||| ||||||||||||||| |||||||||||||| |||| |||||||    
T  8649592 aatcattattaaaagttaattgaattcataactccctgtcggaacgat 8649639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 13251397 - 13251448
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  13251397 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 13251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 16432307 - 16432358
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  16432307 tctaatcattatttaaagttaattgaattcataactccttgtcggaacgata 16432358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17717460 - 17717511
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  17717460 tctaatcattatttaaagttaattgaattcataactccttgtcggaacgata 17717511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 20412950 - 20413001
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  20412950 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 20413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 23289376 - 23289325
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  23289376 tctaatcattattgaaagttaattgaattcataactccctgtcggaacgata 23289325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 26133728 - 26133677
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  26133728 tctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 26133677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 21240767 - 21240817
Alignment:
Q  93 ctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  21240767 ctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 21240817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 41228994 - 41229043
Alignment:
Q  94 taatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||||||||||||| |||||||||||||| | || ||||||||    
T  41228994 taatcattattaaaagttaattgaattcataactccctatcggaacgata 41229043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20449093 - 20449145
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||||||| ||| |||||||||||||| |||| ||||||||    
T  20449093 ttctaatcattgttaaaagtcaattgaattcataactccctgtcggaacgata 20449145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20534859 - 20534911
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||||||| ||| |||||||||||||| |||| ||||||||    
T  20534859 ttctaatcattgttaaaagtcaattgaattcataactccctgtcggaacgata 20534911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 28205722 - 28205670
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| |||||||||| |||| |||||||||||||| | || ||||||||    
T  28205722 ttctaatcattattaaaagataattgaattcataactccctatcggaacgata 28205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 16354777 - 16354828
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| ||| ||| |||||| |||||||||||||    
T  16354777 tctaatcattatttaaagttaattgaaatcaaaactccctgtcagaacgata 16354828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 17612448 - 17612401
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||    
T  17612448 tctaatcatcattaaaagttaattgaattcataactccctgtcggaac 17612401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 20405412 - 20405463
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||  |||| ||||||||    
T  20405412 tctaatcattgttaaaagttaattgaattcataactctctgtcggaacgata 20405463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 21791733 - 21791682
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  21791733 tctaatcattgttaaaagttaactgaattcataactccctgtcggaacgata 21791682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 22142128 - 22142179
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  22142128 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 22142179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 22314726 - 22314777
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  22314726 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 22314777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 22635107 - 22635056
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| ||||  |||||||    
T  22635107 tctaatcattatttaaagttaattgaattcataactccctgtcgaaacgata 22635056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 131
Target Start/End: Original strand, 41802975 - 41803006
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccat 131  Q
    ||||||||||||||| ||||||||||||||||    
T  41802975 ttattaaaagttaattgaattcataactccat 41803006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 44538898 - 44538933
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataact 127  Q
    ||||||| ||||||||||||||| ||||||||||||    
T  44538898 tctaatcattattaaaagttaattgaattcataact 44538933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 50019848 - 50019797
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  50019848 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 50019797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 52235387 - 52235336
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || || ||||||||| |||||||||||||| |||| ||||||||    
T  52235387 tctaatcattgttgaaagttaattgaattcataactccctgtcggaacgata 52235336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 20915377 - 20915328
Alignment:
Q  94 taatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  20915377 taatcattattaaaagttaattgaattcataactccatgtcggaacgata 20915328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 25485808 - 25485756
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  25485808 ttctaatcattattgaaagttaattgaattcataactccatgtcggaacgata 25485756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 20738950 - 20738985
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattatt 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  20738950 agatgaaccaataatctcaaggcgttttttattatt 20738985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 25577027 - 25576976
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  25577027 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 25576976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 34781021 - 34781072
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  34781021 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 34781072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 42789213 - 42789162
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||||||||||    
T  42789213 tctaatcttcattaaaagttaattgaattcataactccctgtcagaacgata 42789162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 18483080 - 18483029
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||| |||| ||||||||    
T  18483080 tctaatcattattaaaagttacttgaattcataactccctgtcggaacgata 18483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 18612668 - 18612617
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  18612668 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 18612617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 20831850 - 20831799
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  20831850 tctaatcatcattaaaagttaattgaattcataactccttgtcggaacgata 20831799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 17408124 - 17408074
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgat 142  Q
    ||||||| ||||| ||||||||| |||||||||||||| | ||||||||||    
T  17408124 tctaatcattatttaaagttaattgaattcataactccctatcagaacgat 17408074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 19890431 - 19890483
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || || ||||||||| |||||||||||||| |||| ||||||||    
T  19890431 ttctaatcattgttgaaagttaattgaattcataactccctgtcggaacgata 19890483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20167582 - 20167530
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||| ||||||||| |||||||||||||| | || ||||||||    
T  20167582 ttctaatcattattgaaagttaattgaattcataactccctatcggaacgata 20167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20594702 - 20594650
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20594702 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20594650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20600988 - 20600936
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20600988 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20600936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20607279 - 20607227
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20607279 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20613616 - 20613564
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20613616 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20613564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 23028990 - 23028938
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||||||||  |||| ||||||||||||| |||| ||||||||    
T  23028990 ttctaatcattattaaaagcgaatcaaattcataactccctgtcggaacgata 23028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 23342912 - 23342860
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| ||||||| ||||||||||| ||||||||    
T  23342912 ttctaatcattgttaaaagataattgaattcacaactccatgtcggaacgata 23342860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23771640 - 23771692
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  23771640 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 23771692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 28834280 - 28834228
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  28834280 ttctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 28834228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 20799893 - 20799944
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  20799893 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 20799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 20968436 - 20968479
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||||| |||||||||||||| | || ||||||||    
T  20968436 ttattaaaagttaattgaattcataactccctatcggaacgata 20968479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 21999906 - 21999855
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| |||| |||||||||| |||||||||||||| | || ||||||||    
T  21999906 tctaatcattatcaaaagttaattgaattcataactccctatcggaacgata 21999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24165944 - 24165995
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| ||||||||||| || |||| ||||||||    
T  24165944 tctaatcattatttaaagttaattgaattcataacaccctgtcggaacgata 24165995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24936189 - 24936240
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  24936189 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 24936240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24941881 - 24941932
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  24941881 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 24941932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 31057091 - 31057040
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  31057091 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 31057040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 31757618 - 31757583
Alignment:
Q  3 gatgaaccaataatctcaaggcgttttttattatta 38  Q
    ||||||||||||||||||| ||| ||||||||||||    
T  31757618 gatgaaccaataatctcaatgcgctttttattatta 31757583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 2595 - 2544
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  2595 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 2544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 126 - 177
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  126 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 11997 - 11946
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||||||||  |||||||    
T  11997 tctaatcattattaaaagttaattgaattcataactccatgtcgaaacgata 11946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 24637 - 24586
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  24637 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 24586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 53508 - 53559
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  53508 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 53559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 32753 - 32702
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  32753 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 32702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 13717 - 13666
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  13717 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 13666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14351025 - 14350974
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||| ||||    
T  14351025 tctaatcatcattaaaagttaattgaattcataactccatgtcagaatgata 14350974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23694472 - 23694523
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  23694472 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 23694523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24967952 - 24968003
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||||||||||||    
T  24967952 tctaatcattatttaaagttaattgaattcataactccctgtcagaacgata 24968003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 19791662 - 19791573
Alignment:
Q  56 accgttaaaaatcacaactttataattt--aattttgttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||||||||  |||||| |||| |  || ||| |||||||| || |||||||||||| |||||||||||||| | |||||||||||    
T  19791662 accgttaaaaatccaaactttttaatctcaaactttcttctaatcattgttaaaagttaattgaattcataactccctatcagaacgata 19791573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 1989883 - 1989831
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  1989883 ttctaatcattattgaaagttaattgaattcataactccttgtcggaacgata 1989831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22725216 - 22725164
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  22725216 ttctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 22725164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 9318543 - 9318594
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| || |||||| ||||||||||||||||||| ||||||||    
T  9318543 tctaatcattatttaaggttaattgaattcataactccatgtcggaacgata 9318594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14877717 - 14877666
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| ||| |||||||||| |||| ||||||||    
T  14877717 tctaatcattattaaaagttaattgaactcataactccttgtcggaacgata 14877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 17515255 - 17515204
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||  |||||||||||||| |||| ||||||||    
T  17515255 tctaatcattattaaaagttaactgaattcataactccctgtcggaacgata 17515204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 18162715 - 18162762
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||    
T  18162715 tctaatcattattaaaagttaattgaattcataactccctgtcggaac 18162762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 19998098 - 19998149
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  19998098 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 19998149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 20043510 - 20043459
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  20043510 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 20043459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 22994422 - 22994473
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  22994422 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 22994473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 23227690 - 23227639
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||    
T  23227690 tctaatcattatctaaagttaattgaattcataactccatgtcggaacgata 23227639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 29336168 - 29336219
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  29336168 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 29336219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 37818445 - 37818496
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| ||||||||||||| ||||| ||||||||    
T  37818445 tctaatcattatttaaagttaattgaattcataactctatgtcggaacgata 37818496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 6280355 - 6280396
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattattactatt 43  Q
    |||||||||||||||| |||||||||||||||| ||| ||||    
T  6280355 agatgaaccaataatcccaaggcgttttttatttttattatt 6280396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 20037852 - 20037811
Alignment:
Q  102 attaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||| |||||||||||||| |||| ||||||||    
T  20037852 attaaaagttaattgaattcataactccctgtcggaacgata 20037811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 1686372 - 1686424
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  1686372 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 1686424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 21103008 - 21102956
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  21103008 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 21102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22554879 - 22554827
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  22554879 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 22554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17616314 - 17616365
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  17616314 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 17616365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 18959875 - 18959926
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||  |||| ||||||||    
T  18959875 tctaatcattatttaaagttaattgaattcataactctctgtcggaacgata 18959926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25229347 - 25229398
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  25229347 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 25229398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25397650 - 25397701
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||| | |||| ||||||||    
T  25397650 tctaatcattatttaaagttaattgaattcataacttcctgtcggaacgata 25397701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25733979 - 25734030
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||| | |||| ||||||||    
T  25733979 tctaatcattatttaaagttaattgaattcataacttcctgtcggaacgata 25734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 25751076 - 25751025
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  25751076 tctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 25751025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 29326010 - 29326061
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||  |||||||    
T  29326010 tctaatcatcattaaaagttaattgaattcataactccctgtcgaaacgata 29326061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 33633155 - 33633198
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||||| |||||||||||||| ||||  |||||||    
T  33633155 ttattaaaagttaattgaattcataactccctgtcgaaacgata 33633198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000001; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 4188854 - 4188905
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  4188854 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 4188905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 12656703 - 12656652
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | ||||||||| ||||||||||||||||||    
T  12656703 tctaatcattattaaaagttacttgaattcatacctccatgtcagaacgata 12656652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 19074721 - 19074670
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  19074721 tctaatcattattaaaagttaattgaattcataactccctgtcggaacgata 19074670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17744150 - 17744201
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| | || ||||||||    
T  17744150 tctaatcattattaaaagttaattgaattcataactccctatcggaacgata 17744201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 18449464 - 18449511
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||    
T  18449464 tctaatcattattaaaagttaattgaattcataactccctgtcggaac 18449511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 18628040 - 18628075
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattatt 37  Q
    |||||||||||||||| |||||||||||||||||||    
T  18628040 agatgaaccaataatcccaaggcgttttttattatt 18628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 19569551 - 19569500
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  19569551 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 19569500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 20465065 - 20465116
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || || ||||||||| ||||||||||||||||||| ||||||||    
T  20465065 tctaatcattcttgaaagttaattgaattcataactccatgtcggaacgata 20465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 22006475 - 22006526
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  22006475 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 22006526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23493011 - 23493062
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  23493011 tctaatcatttttaaaagttaattgaattcataactccctgtcggaacgata 23493062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 23602672 - 23602621
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||| |||| ||||||||    
T  23602672 tctaatcattattaaaagttacttgaattcataactccctgtcggaacgata 23602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25950021 - 25950072
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||  |||||||||||||| |||||||||||||||||||  |||||||    
T  25950021 tctaatcagtattaaaagttaattgaattcataactccatgtcgaaacgata 25950072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 26139363 - 26139414
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  26139363 tctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 26139414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 21322817 - 21322867
Alignment:
Q  93 ctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  21322817 ctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 21322867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 26018659 - 26018700
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgt 133  Q
    ||||||| || |||||||||||| ||||||||||||||||||    
T  26018659 tctaatcattgttaaaagttaattgaattcataactccatgt 26018700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22060385 - 22060333
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  22060385 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 22060333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22071466 - 22071414
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  22071466 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 22071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 27565269 - 27565217
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  27565269 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 27565217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 1176843 - 1176792
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || || ||||||||| |||||||||||||| |||| ||||||||    
T  1176843 tctaatcattgttgaaagttaattgaattcataactccctgtcggaacgata 1176792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 6795637 - 6795680
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtc 134  Q
    |||||||| ||||| ||||||||| |||||||||||||| ||||    
T  6795637 ttctaatcattattgaaagttaattgaattcataactccctgtc 6795680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 11228672 - 11228621
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  11228672 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 11228621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 12473922 - 12473871
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||| ||||||| |||| ||||||||    
T  12473922 tctaatcatcattaaaagttaattgaattcttaactccctgtcggaacgata 12473871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 17283423 - 17283372
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||  |||| ||||||||    
T  17283423 tctaatcattatttaaagttaattgaattcataactctctgtcggaacgata 17283372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 19269825 - 19269782
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  19269825 ttatttaaagttaattgaattcataactccctgtcggaacgata 19269782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 19612214 - 19612179
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattatt 37  Q
    |||||||||||||||| ||||||| |||||||||||    
T  19612214 agatgaaccaataatcccaaggcgctttttattatt 19612179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24219440 - 24219491
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  24219440 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 24219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 25401840 - 25401789
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  25401840 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 25401789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25622977 - 25623028
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  25622977 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 25623028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 25964632 - 25964671
Alignment:
Q  104 taaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||| |||||||||||||| |||| ||||||||    
T  25964632 taaaagttaattgaattcataactccctgtcggaacgata 25964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 25969279 - 25969318
Alignment:
Q  104 taaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||| |||||||||||||| |||| ||||||||    
T  25969279 taaaagttaattgaattcataactccctgtcggaacgata 25969318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 25973719 - 25973758
Alignment:
Q  104 taaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||| |||||||||||||| |||| ||||||||    
T  25973719 taaaagttaattgaattcataactccctgtcggaacgata 25973758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 31964997 - 31964959
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattattacta 41  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  31964997 agatgaaccaataatcccaaggcgt-ttttattattacta 31964959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 35060056 - 35060107
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  35060056 tctaatcattatctaaagttaattgaattcataactccttgtcggaacgata 35060107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 35243742 - 35243691
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  35243742 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 35243691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000005; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 24365800 - 24365656
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttatt---attactattgttattttctagaccgttaaaaatcacaactttataatttaattttgttctaatc 98  Q
    |||||||||||||||| |||| |  ||||||||   |||| ||||||||||||||| |||||||||||||  |||||||   |  || | |  ||||||     
T  24365800 agatgaaccaataatcccaagacactttttattattattattattgttattttctaaaccgttaaaaatccaaactttaatctcaaactctcatctaatt 24365701  T
Q  99 cttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
     ||||| ||||||||| |||||||||||| | |||| ||||||||    
T  24365700 attatttaaagttaattgaattcataacttcctgtcggaacgata 24365656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 23084252 - 23084200
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  23084252 ttctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 23084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 20282824 - 20282875
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| |||||||||||| || |||||||||||||| |||| ||||||||    
T  20282824 tctaatcattattaaaagttgattgaattcataactccctgtcggaacgata 20282875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 20312108 - 20312057
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||||||||||||    
T  20312108 tctaatcattatctaaagttaattgaattcataactccctgtcagaacgata 20312057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 36684993 - 36685044
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  36684993 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 36685044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 44998935 - 44998986
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  44998935 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 44998986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 19012407 - 19012357
Alignment:
Q  93 ctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||| || || ||||||||| |||||||||||||||||||| |||||||    
T  19012407 ctaatcattgttgaaagttaattgaattcataactccatgtcaaaacgata 19012357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 18942411 - 18942359
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  18942411 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 18942359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20376639 - 20376587
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  20376639 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 20376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 35081311 - 35081363
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  35081311 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 35081363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 44370941 - 44370889
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  44370941 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 44370889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 539890 - 539933
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||    
T  539890 ttattaaaagttaatcgaattcataattctctgtcggaacgata 539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 7942376 - 7942427
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| ||||||||||||| ||||| ||||||||    
T  7942376 tctaatcattatctaaagttaattgaattcataactcaatgtcggaacgata 7942427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 21467820 - 21467773
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||    
T  21467820 tctaatcatcattaaaagttaattgaattcataactccctgtcggaac 21467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 23084345 - 23084295
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattattactattgttattttct 53  Q
    |||||||||||||||| ||||||  |||||||| ||| ||||||||||||||    
T  23084345 agatgaaccaataatcccaaggctctttttatt-ttattattgttattttct 23084295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23341263 - 23341314
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| ||||  |||||||    
T  23341263 tctaatcattgttaaaagttaattgaattcataactccctgtcgaaacgata 23341314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 23800280 - 23800229
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  23800280 tctaatcattatctaaagttaattgaattcataactccttgtcggaacgata 23800229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 24507996 - 24508047
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || || ||||||||| |||||||||||||||||||  |||||||    
T  24507996 tctaatcattgttgaaagttaattgaattcataactccatgtcgaaacgata 24508047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 24819984 - 24819933
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  24819984 tctaatcatttttaaaagttaactgaattcataactccttgtcggaacgata 24819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 24824369 - 24824318
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  24824369 tctaatcatttttaaaagttaactgaattcataactccctgtcggaacgata 24824318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 31590054 - 31590019
Alignment:
Q  3 gatgaaccaataatctcaaggcgttttttattatta 38  Q
    ||||||||||||||||| ||||| ||||||||||||    
T  31590054 gatgaaccaataatctcgaggcgctttttattatta 31590019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 1737 - 1686
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  1737 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 6093 - 6042
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||||||||    
T  6093 tctaatcattgttaaaagttaattgaattcataactccctgtcggaacgata 6042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 9208 - 9157
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  9208 tctaatcattatttaaagttaattgaattcataactccttgtcggaacgata 9157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16355 - 16304
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  16355 tctaatcgtcattaaaagttaattgaattcataactccctgtcggaacgata 16304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 18310 - 18259
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| |||||||||||||||  ||||||||||||| |||| ||||||||    
T  18310 tctaatcattattaaaagttaattaaattcataactccctgtcggaacgata 18259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16998 - 16947
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  16998 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 16947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15961 - 16012
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  15961 tctaatcattattgaaagttaattgaattcataactccctgtcggaacgata 16012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16940 - 16889
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  16940 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 43356 - 43407
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| ||||||||||||||  ||| ||||||||    
T  43356 tctaatcattattaaaagttaattgaattcataactccccgtcggaacgata 43407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000003; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 745 - 796
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  745 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 42883 - 42831
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  42883 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000003; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 4288 - 4253
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattatt 37  Q
    |||||||||||||||||||||||| |||||||||||    
T  4288 agatgaaccaataatctcaaggcgctttttattatt 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 43700 - 43648
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| ||||| ||||||||| |||||||||||||  |||||||| ||||    
T  43700 ttctaatcattattgaaagttaattgaattcataactctctgtcagaatgata 43648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 27676 - 27625
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||||| |||||||||||||| | || ||||||||    
T  27676 tctaatcattattaaaagttaattgaattcataactccctttctgaacgata 27625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 51145 - 51094
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  51145 tctaatcattattgaaagttaattgaattcataactccctgtcggaacgata 51094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 31669 - 31618
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  31669 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 31618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 135053 - 135104
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  135053 tctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 135104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 175515 - 175550
Alignment:
Q  2 agatgaaccaataatctcaaggcgttttttattatt 37  Q
    |||||||||||||||||||||||| |||||||||||    
T  175515 agatgaaccaataatctcaaggcgctttttattatt 175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 164426 - 164477
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||| |||| ||||||||    
T  164426 tctaatcattattaaaagttacttgaattcataactccctgtcggaacgata 164477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 94230 - 94179
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| |||||||||||||| |||| ||||||||    
T  94230 tctaatcatcattaaaagttaattgaattcataactccctgtcggaacgata 94179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 182063 - 182020
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||    
T  182063 ttattaaaagttaattgaattcataactccctgtcggaacgata 182020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 82010 - 81958
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || |||||||| ||| |||||||||||||| |||| ||||||||    
T  82010 ttctaatcattgttaaaagtcaattgaattcataactccctgtcggaacgata 81958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 102732 - 102782
Alignment:
Q  93 ctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||| ||||| ||||||||| |||||||||||||| |||| ||||||||    
T  102732 ctaatcattatttaaagttaattgaattcataactccctgtcggaacgata 102782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 2966 - 2914
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  2966 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 2914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 1203 - 1154
Alignment:
Q  94 taatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||| ||||| ||||||||| |||||||||||||  |||||||||||||    
T  1203 taatcattatttaaagttaattgaattcataactcactgtcagaacgata 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000005; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 78555 - 78604
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacga 141  Q
    ||||||| || |||||||||||| |||||||||||||| | |||||||||    
T  78555 tctaatcattgttaaaagttaattgaattcataactccctatcagaacga 78604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 17265 - 17316
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | |||||||||||||  ||||||||||||| |||| ||||||||    
T  17265 tctaatcatcattaaaagttaattaaattcataactccctgtcggaacgata 17316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 23971 - 24022
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| || ||||||||||| |||| ||||||||    
T  23971 tctaatcattatttaaagttaattgagttcataactccctgtcggaacgata 24022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 55 - 3
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  55 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 1302 - 1354
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  1302 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 3947 - 3999
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  3947 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 109 - 161
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  109 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 29; Significance: 0.0000002; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 2042 - 2094
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  2042 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 2094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 9079 - 9131
Alignment:
Q  91 ttctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    |||||||| || ||||||| |||| |||||||||||||| |||| ||||||||    
T  9079 ttctaatcattgttaaaagataattgaattcataactccctgtcggaacgata 9131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 1749 - 1698
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  1749 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 1698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 1788 - 1737
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  1788 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 700 - 649
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  700 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 2409 - 2362
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaac 139  Q
    ||||||| ||||  ||||||||| ||||||||||||||||||| ||||    
T  2409 tctaatcattatctaaagttaattgaattcataactccatgtcggaac 2362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 4498 - 4447
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| | ||||||||||||| ||| |||||||||| |||| ||||||||    
T  4498 tctaatcatcattaaaagttaattgaaatcataactccctgtcggaacgata 4447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 28; Significance: 0.0000007; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 7112 - 7163
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| ||||  |||||||    
T  7112 tctaatcattatttaaagttaattgaattcataactccctgtcgaaacgata 7163  T

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Target: scaffold0447; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 11726 - 11777
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| ||||  |||||||    
T  11726 tctaatcattatttaaagttaattgaattcataactccctgtcgaaacgata 11777  T

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Target: scaffold0383 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 9721 - 9772
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||| ||||||||| |||||||||||||| ||||  |||||||    
T  9721 tctaatcattatttaaagttaattgaattcataactccctgtcgaaacgata 9772  T

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Target: scaffold0360 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 5503 - 5452
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||| | |||||||    
T  5503 tctaatcattattaaaaattaattgaattcataactccctgttataacgata 5452  T

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Target: scaffold0301 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 1719 - 1668
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  1719 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 1668  T

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Target: scaffold0273 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 18792 - 18843
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  18792 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 18843  T

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Target: scaffold0266 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 21664 - 21715
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  21664 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 21715  T

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Target: scaffold0220 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 3535 - 3484
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  3535 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 3484  T

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Target: scaffold0096 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 37408 - 37357
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||||||||||| | |||||||||||||  |||| ||||||||    
T  37408 tctaatcattattaaaagttatttgaattcataactctctgtcggaacgata 37357  T

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Target: scaffold0084 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 44570 - 44621
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  44570 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 44621  T

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Target: scaffold0064 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 49515 - 49554
Alignment:
Q  104 taaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||| |||||||||||||| |||| ||||||||    
T  49515 taaaagttaattgaattcataactccctgtcggaacgata 49554  T

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Target: scaffold0046 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 21176 - 21219
Alignment:
Q  100 ttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||||||||||| |||||||||||||  |||| ||||||||    
T  21176 ttattaaaagttaattgaattcataactctctgtcggaacgata 21219  T

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Target: scaffold0037 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 49105 - 49156
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  49105 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 49156  T

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Target: scaffold0035 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 49404 - 49353
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||| |||||||||||||| |||| ||| ||||    
T  49404 tctaatcattgttaaaagttaattgaattcataactccctgtcggaatgata 49353  T

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Target: scaffold0032 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 118439 - 118490
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| ||||  ||||||||| |||||||||||||| |||| ||||||||    
T  118439 tctaatcattatctaaagttaattgaattcataactccctgtcggaacgata 118490  T

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Target: scaffold0018 (Bit Score: 28; Significance: 0.0000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 11958 - 11907
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  11958 tctaatcatttttaaaagttaactgaattcataactccttgtcggaacgata 11907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 18150 - 18099
Alignment:
Q  92 tctaatccttattaaaagttaatcgaattcataactccatgtcagaacgata 143  Q
    ||||||| || |||||||||||  |||||||||||||| |||| ||||||||    
T  18150 tctaatcatttttaaaagttaactgaattcataactccttgtcggaacgata 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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