View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5836-9 (Length: 150)

Name: Solexa-NF5836-9
Description: NF5836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5836-9
Solexa-NF5836-9
[»] chr7 (41 HSPs)
chr7 (2-150)||(39453608-39453755)
chr7 (119-150)||(7876461-7876492)
chr7 (119-150)||(24228549-24228580)
chr7 (119-150)||(24923157-24923188)
chr7 (119-150)||(25894061-25894092)
chr7 (119-150)||(26579861-26579892)
chr7 (119-150)||(29610643-29610674)
chr7 (119-150)||(32556739-32556770)
chr7 (119-150)||(35752167-35752198)
chr7 (119-150)||(36816978-36817009)
chr7 (119-150)||(39323624-39323655)
chr7 (119-150)||(39866673-39866704)
chr7 (119-150)||(46817554-46817585)
chr7 (119-150)||(47906892-47906923)
chr7 (119-150)||(48085866-48085897)
chr7 (120-150)||(498321-498351)
chr7 (120-150)||(26941665-26941695)
chr7 (120-150)||(37127946-37127976)
chr7 (123-150)||(2341806-2341833)
chr7 (119-150)||(5712176-5712207)
chr7 (123-150)||(10028500-10028527)
chr7 (123-150)||(15877562-15877589)
chr7 (123-150)||(20165958-20165985)
chr7 (123-150)||(22979791-22979818)
chr7 (119-150)||(25037641-25037672)
chr7 (119-150)||(29098759-29098790)
chr7 (123-150)||(33332801-33332828)
chr7 (123-150)||(33411272-33411299)
chr7 (123-150)||(33839859-33839886)
chr7 (119-150)||(35823298-35823329)
chr7 (119-150)||(43489226-43489257)
chr7 (119-150)||(44003503-44003534)
chr7 (123-150)||(45063499-45063526)
chr7 (123-150)||(45482670-45482697)
chr7 (119-150)||(45690241-45690272)
chr7 (119-150)||(46103129-46103160)
chr7 (119-150)||(46898149-46898180)
chr7 (123-150)||(46913121-46913148)
chr7 (123-150)||(47740475-47740502)
chr7 (123-150)||(48609821-48609848)
chr7 (123-150)||(49171506-49171533)
[»] scaffold0721 (1 HSPs)
scaffold0721 (119-150)||(7097-7128)
[»] chr8 (33 HSPs)
chr8 (119-150)||(117462-117493)
chr8 (119-150)||(2379147-2379178)
chr8 (119-150)||(9713696-9713727)
chr8 (119-150)||(27243272-27243303)
chr8 (119-150)||(27254847-27254878)
chr8 (119-150)||(31940322-31940353)
chr8 (120-150)||(4975540-4975570)
chr8 (120-150)||(33622598-33622628)
chr8 (122-150)||(40458905-40458933)
chr8 (123-150)||(2275924-2275951)
chr8 (123-150)||(2714560-2714587)
chr8 (119-150)||(3490532-3490563)
chr8 (119-150)||(4447428-4447459)
chr8 (123-150)||(5946058-5946085)
chr8 (123-150)||(6365997-6366024)
chr8 (123-150)||(9303718-9303745)
chr8 (119-150)||(10378316-10378347)
chr8 (123-150)||(13760792-13760819)
chr8 (123-150)||(17718866-17718893)
chr8 (123-150)||(22878402-22878429)
chr8 (123-150)||(24080045-24080072)
chr8 (123-150)||(31831099-31831126)
chr8 (123-150)||(32114260-32114287)
chr8 (123-150)||(32984221-32984248)
chr8 (123-150)||(37301469-37301496)
chr8 (123-150)||(37419951-37419978)
chr8 (123-150)||(37956432-37956459)
chr8 (119-150)||(39915956-39915987)
chr8 (123-150)||(41653906-41653933)
chr8 (119-150)||(41843260-41843291)
chr8 (123-150)||(41862231-41862258)
chr8 (123-150)||(43328718-43328745)
chr8 (123-150)||(45236709-45236736)
[»] chr6 (19 HSPs)
chr6 (119-150)||(3291015-3291046)
chr6 (119-150)||(13329388-13329419)
chr6 (119-150)||(28948978-28949009)
chr6 (123-150)||(599903-599930)
chr6 (123-150)||(960048-960075)
chr6 (123-150)||(1970722-1970749)
chr6 (123-150)||(2892199-2892226)
chr6 (123-150)||(5882517-5882544)
chr6 (123-150)||(8615251-8615278)
chr6 (119-150)||(15965440-15965471)
chr6 (123-150)||(16703377-16703404)
chr6 (123-150)||(18101639-18101666)
chr6 (123-150)||(19281199-19281226)
chr6 (123-150)||(19415677-19415704)
chr6 (123-150)||(22551205-22551232)
chr6 (119-150)||(26377348-26377379)
chr6 (123-150)||(28947098-28947125)
chr6 (123-150)||(30467747-30467774)
chr6 (123-150)||(30743592-30743619)
[»] chr5 (29 HSPs)
chr5 (119-150)||(6973070-6973101)
chr5 (119-150)||(9171158-9171189)
chr5 (119-150)||(9424725-9424756)
chr5 (119-150)||(13957677-13957708)
chr5 (119-150)||(27503386-27503417)
chr5 (119-150)||(35626045-35626076)
chr5 (119-150)||(36365578-36365609)
chr5 (119-150)||(38015647-38015678)
chr5 (119-150)||(42247915-42247946)
chr5 (121-150)||(42658795-42658824)
chr5 (122-150)||(40279002-40279030)
chr5 (123-150)||(3466825-3466852)
chr5 (123-150)||(4149705-4149732)
chr5 (123-150)||(5137726-5137753)
chr5 (123-150)||(5184983-5185010)
chr5 (119-150)||(5497280-5497311)
chr5 (119-150)||(9374635-9374666)
chr5 (123-150)||(9527153-9527180)
chr5 (123-150)||(15398626-15398653)
chr5 (123-150)||(18479812-18479839)
chr5 (119-150)||(19295737-19295768)
chr5 (119-150)||(23195381-23195412)
chr5 (123-150)||(24253393-24253420)
chr5 (123-150)||(25831532-25831559)
chr5 (119-150)||(33617592-33617623)
chr5 (123-150)||(38756632-38756659)
chr5 (123-150)||(39932590-39932617)
chr5 (123-150)||(40886171-40886198)
chr5 (123-150)||(43326523-43326550)
[»] chr4 (54 HSPs)
chr4 (119-150)||(5117571-5117602)
chr4 (119-150)||(11972262-11972293)
chr4 (119-150)||(15060422-15060453)
chr4 (119-150)||(20351975-20352006)
chr4 (119-150)||(27873681-27873712)
chr4 (119-150)||(34276554-34276585)
chr4 (119-150)||(34552326-34552357)
chr4 (119-150)||(37239223-37239254)
chr4 (119-150)||(46708874-46708905)
chr4 (120-150)||(45633912-45633942)
chr4 (123-150)||(146573-146600)
chr4 (123-150)||(397413-397440)
chr4 (123-150)||(2243469-2243496)
chr4 (119-150)||(3293156-3293187)
chr4 (123-150)||(6019939-6019966)
chr4 (123-150)||(6285318-6285345)
chr4 (123-150)||(9798476-9798503)
chr4 (119-150)||(9998064-9998095)
chr4 (123-150)||(14017518-14017545)
chr4 (123-150)||(17555630-17555657)
chr4 (123-150)||(18462157-18462184)
chr4 (123-150)||(21366753-21366780)
chr4 (123-150)||(22468914-22468941)
chr4 (123-150)||(22618656-22618683)
chr4 (123-150)||(23437603-23437630)
chr4 (123-150)||(29478371-29478398)
chr4 (123-150)||(29777401-29777428)
chr4 (123-150)||(31070217-31070244)
chr4 (119-150)||(31881447-31881478)
chr4 (119-150)||(33289710-33289741)
chr4 (123-150)||(33897639-33897666)
chr4 (119-150)||(36532964-36532995)
chr4 (123-150)||(39077556-39077583)
chr4 (123-150)||(41632150-41632177)
chr4 (123-150)||(41949393-41949420)
chr4 (123-150)||(42033186-42033213)
chr4 (123-150)||(42222302-42222329)
chr4 (123-150)||(42557593-42557620)
chr4 (123-150)||(43471839-43471866)
chr4 (119-150)||(43890935-43890966)
chr4 (119-150)||(44984768-44984799)
chr4 (123-150)||(47344667-47344694)
chr4 (119-150)||(47811913-47811944)
chr4 (123-150)||(48313568-48313595)
chr4 (123-150)||(49881207-49881234)
chr4 (123-150)||(50457954-50457981)
chr4 (123-150)||(51363018-51363045)
chr4 (119-150)||(52688356-52688387)
chr4 (123-150)||(53854573-53854600)
chr4 (119-150)||(54216320-54216351)
chr4 (119-150)||(54216869-54216900)
chr4 (119-150)||(54715042-54715073)
chr4 (123-150)||(54805762-54805789)
chr4 (123-150)||(55056403-55056430)
[»] chr3 (43 HSPs)
chr3 (119-150)||(20754537-20754568)
chr3 (119-150)||(25641653-25641684)
chr3 (119-150)||(28048536-28048567)
chr3 (119-150)||(31286926-31286957)
chr3 (119-150)||(34279854-34279885)
chr3 (119-150)||(38156765-38156796)
chr3 (119-150)||(41635933-41635964)
chr3 (119-150)||(42589837-42589868)
chr3 (119-150)||(47809741-47809772)
chr3 (119-150)||(51224170-51224201)
chr3 (119-150)||(51415976-51416007)
chr3 (119-150)||(54707353-54707384)
chr3 (120-150)||(54401195-54401225)
chr3 (123-150)||(2666011-2666038)
chr3 (123-150)||(5560176-5560203)
chr3 (123-150)||(7755450-7755477)
chr3 (119-150)||(17665657-17665688)
chr3 (123-150)||(22399108-22399135)
chr3 (123-150)||(24100294-24100321)
chr3 (123-150)||(27067122-27067149)
chr3 (123-150)||(29625971-29625998)
chr3 (123-150)||(32234541-32234568)
chr3 (123-150)||(37313410-37313437)
chr3 (119-150)||(37324548-37324579)
chr3 (123-150)||(39053405-39053432)
chr3 (119-150)||(39141259-39141290)
chr3 (123-150)||(40131103-40131130)
chr3 (123-150)||(40804654-40804681)
chr3 (123-150)||(41293462-41293489)
chr3 (123-150)||(41464363-41464390)
chr3 (123-150)||(42291853-42291880)
chr3 (123-150)||(43021725-43021752)
chr3 (123-150)||(43125842-43125869)
chr3 (123-150)||(44806695-44806722)
chr3 (123-150)||(47257804-47257831)
chr3 (119-150)||(47511073-47511104)
chr3 (119-150)||(48726131-48726162)
chr3 (119-150)||(49130585-49130616)
chr3 (123-150)||(49330048-49330075)
chr3 (123-150)||(51102522-51102549)
chr3 (123-150)||(51452894-51452921)
chr3 (123-150)||(52628965-52628992)
chr3 (119-150)||(55000311-55000342)
[»] chr2 (41 HSPs)
chr2 (119-150)||(145288-145319)
chr2 (119-150)||(2000470-2000501)
chr2 (119-150)||(2688862-2688893)
chr2 (119-150)||(12333628-12333659)
chr2 (119-150)||(27331304-27331335)
chr2 (119-150)||(28641425-28641456)
chr2 (119-150)||(35158183-35158214)
chr2 (119-150)||(39301330-39301361)
chr2 (119-147)||(40635224-40635252)
chr2 (119-147)||(43356105-43356133)
chr2 (123-150)||(746476-746503)
chr2 (123-150)||(2325033-2325060)
chr2 (119-150)||(3266302-3266333)
chr2 (123-150)||(4034602-4034629)
chr2 (119-150)||(4258496-4258527)
chr2 (123-150)||(4609636-4609663)
chr2 (123-150)||(6594602-6594629)
chr2 (123-150)||(7892832-7892859)
chr2 (119-150)||(8056632-8056663)
chr2 (123-150)||(10244726-10244753)
chr2 (123-150)||(10424605-10424632)
chr2 (119-150)||(12730067-12730098)
chr2 (123-150)||(12814624-12814651)
chr2 (123-150)||(12842113-12842140)
chr2 (123-150)||(13815362-13815389)
chr2 (119-150)||(21735033-21735064)
chr2 (123-150)||(23901789-23901816)
chr2 (123-150)||(26710355-26710382)
chr2 (123-150)||(27024425-27024452)
chr2 (123-150)||(27400413-27400440)
chr2 (123-150)||(27651178-27651205)
chr2 (119-150)||(27764995-27765026)
chr2 (123-150)||(28019965-28019992)
chr2 (119-150)||(29687047-29687078)
chr2 (123-150)||(32327371-32327398)
chr2 (123-150)||(32608390-32608417)
chr2 (123-150)||(34518377-34518404)
chr2 (123-150)||(37621014-37621041)
chr2 (123-150)||(38997111-38997138)
chr2 (119-150)||(39103053-39103084)
chr2 (123-150)||(40735474-40735501)
[»] chr1 (50 HSPs)
chr1 (119-150)||(3611143-3611174)
chr1 (119-150)||(4953059-4953090)
chr1 (119-150)||(6626157-6626188)
chr1 (119-150)||(13281695-13281726)
chr1 (119-150)||(26472312-26472343)
chr1 (119-150)||(29770677-29770708)
chr1 (119-150)||(32448655-32448686)
chr1 (119-150)||(34752447-34752478)
chr1 (119-150)||(41467765-41467796)
chr1 (119-150)||(42234847-42234878)
chr1 (119-150)||(51057078-51057109)
chr1 (120-150)||(2657311-2657341)
chr1 (119-149)||(50774224-50774254)
chr1 (123-150)||(4156209-4156236)
chr1 (119-150)||(4243623-4243654)
chr1 (123-150)||(5980079-5980106)
chr1 (123-150)||(5981181-5981208)
chr1 (123-150)||(6327691-6327718)
chr1 (119-150)||(10928074-10928105)
chr1 (119-150)||(12891406-12891437)
chr1 (123-150)||(17995095-17995122)
chr1 (123-150)||(23221073-23221100)
chr1 (123-150)||(23932653-23932680)
chr1 (123-150)||(23984766-23984793)
chr1 (123-150)||(24245169-24245196)
chr1 (123-150)||(24885512-24885539)
chr1 (123-150)||(25058699-25058726)
chr1 (123-150)||(26277188-26277215)
chr1 (123-150)||(26525033-26525060)
chr1 (123-150)||(27983731-27983758)
chr1 (119-150)||(30290043-30290074)
chr1 (123-150)||(31040720-31040747)
chr1 (123-150)||(31308012-31308039)
chr1 (123-150)||(31980079-31980106)
chr1 (119-150)||(33073218-33073249)
chr1 (123-150)||(35692808-35692835)
chr1 (119-150)||(36003137-36003168)
chr1 (123-150)||(37620336-37620363)
chr1 (123-150)||(38332003-38332030)
chr1 (119-150)||(44544179-44544210)
chr1 (123-150)||(44661981-44662008)
chr1 (123-150)||(45538164-45538191)
chr1 (119-150)||(46428386-46428417)
chr1 (123-150)||(46616560-46616587)
chr1 (123-150)||(46967185-46967212)
chr1 (123-150)||(47317326-47317353)
chr1 (123-150)||(47383876-47383903)
chr1 (123-150)||(48373515-48373542)
chr1 (123-150)||(49254119-49254146)
chr1 (123-150)||(51403151-51403178)
[»] scaffold0394 (1 HSPs)
scaffold0394 (123-150)||(3099-3126)
[»] scaffold0271 (1 HSPs)
scaffold0271 (119-150)||(17913-17944)
[»] scaffold0092 (1 HSPs)
scaffold0092 (123-150)||(39700-39727)
[»] scaffold0035 (1 HSPs)
scaffold0035 (123-150)||(75388-75415)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 4e-61; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 39453755 - 39453608
Alignment:
Q  2 tttattcaacttccttacttgctttgacaaagaaaaagagatatatccaataaccgttagtgcatagaaattaatctcatataataatgaattttttgtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39453755 tttattcaacttccttacttgctttgacaaagaaaaagagatatatccaataaccgttagtgcatagaaattaatctcatataataatgaattttttgtt 39453656  T
Q  102 taaattatggnnnnnnnctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||       ||||||||| ||||||||||||||||||||||    
T  39453655 taaattatgg-ttttttctaaattacttttgaagaatggtgggtaattt 39453608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 7876492 - 7876461
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  7876492 ctaaattacctttgaagaatggtgggtaattt 7876461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 24228549 - 24228580
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  24228549 ctaaattacctttgaagaatggtgggtaattt 24228580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 24923188 - 24923157
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  24923188 ctaaattacctttgaagaatggtgggtaattt 24923157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 25894092 - 25894061
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  25894092 ctaaattacctttgaagaatggtgggtaattt 25894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 26579892 - 26579861
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  26579892 ctaaattacctttgaagaatggtgggtaattt 26579861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 29610643 - 29610674
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  29610643 ctaaattacctttgaagaatggtgggtaattt 29610674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 32556770 - 32556739
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  32556770 ctaaattacctttgaagaatggtgggtaattt 32556739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 35752198 - 35752167
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  35752198 ctaaattacctttgaagaatggtgggtaattt 35752167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 36817009 - 36816978
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  36817009 ctaaattacctttgaagaatggtgggtaattt 36816978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 39323624 - 39323655
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  39323624 ctaaattacctttgaagaatggtgggtaattt 39323655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 39866673 - 39866704
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  39866673 ctaaattacctttgaagaatggtgggtaattt 39866704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 46817585 - 46817554
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  46817585 ctaaattacctttgaagaatggtgggtaattt 46817554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 47906923 - 47906892
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  47906923 ctaaattacctttgaagaatggtgggtaattt 47906892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 48085866 - 48085897
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  48085866 ctaaattacctttgaagaatggtgggtaattt 48085897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 498351 - 498321
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  498351 taaattacctttgaagaatggtgggtaattt 498321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 26941695 - 26941665
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  26941695 taaattacctttgaagaatggtgggtaattt 26941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 37127946 - 37127976
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  37127946 taaattacctttgaagaatggtgggtaattt 37127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 2341833 - 2341806
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2341833 attacctttgaagaatggtgggtaattt 2341806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 5712176 - 5712207
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||| |||||||||||    
T  5712176 ctaaattacctttgaagaatagtgggtaattt 5712207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 10028500 - 10028527
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  10028500 attacctttgaagaatggtgggtaattt 10028527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 15877562 - 15877589
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  15877562 attacctttgaagaatggtgggtaattt 15877589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 20165985 - 20165958
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  20165985 attacctttgaagaatggtgggtaattt 20165958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 22979818 - 22979791
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22979818 attacctttgaagaatggtgggtaattt 22979791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 25037672 - 25037641
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||| |||||||    
T  25037672 ctaaattacctttgaagaatggtgagtaattt 25037641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 29098759 - 29098790
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||| ||||||||||||||||||||||    
T  29098759 ctaaattacatttgaagaatggtgggtaattt 29098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 33332801 - 33332828
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  33332801 attacctttgaagaatggtgggtaattt 33332828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 33411272 - 33411299
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  33411272 attacctttgaagaatggtgggtaattt 33411299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 33839886 - 33839859
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  33839886 attacctttgaagaatggtgggtaattt 33839859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 35823298 - 35823329
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||| |||||||||||||||||||    
T  35823298 ctaaattaccttagaagaatggtgggtaattt 35823329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 43489226 - 43489257
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  43489226 ctaaattacctttgaataatggtgggtaattt 43489257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 44003534 - 44003503
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  44003534 ctaaattacctttgaaaaatggtgggtaattt 44003503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 45063526 - 45063499
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  45063526 attacctttgaagaatggtgggtaattt 45063499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 45482670 - 45482697
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  45482670 attacctttgaagaatggtgggtaattt 45482697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 45690272 - 45690241
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  45690272 ctaaattacctttgaaaaatggtgggtaattt 45690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 46103129 - 46103160
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  46103129 ctaaattacctttgaaaaatggtgggtaattt 46103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 46898180 - 46898149
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  46898180 ctaaattacctttgaaaaatggtgggtaattt 46898149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 46913121 - 46913148
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  46913121 attacctttgaagaatggtgggtaattt 46913148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 47740502 - 47740475
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  47740502 attacctttgaagaatggtgggtaattt 47740475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 48609848 - 48609821
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  48609848 attacctttgaagaatggtgggtaattt 48609821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 49171533 - 49171506
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  49171533 attacctttgaagaatggtgggtaattt 49171506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 7097 - 7128
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  7097 ctaaattacctttgaagaatggtgggtaattt 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000003; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 117493 - 117462
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  117493 ctaaattacctttgaagaatggtgggtaattt 117462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 2379147 - 2379178
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  2379147 ctaaattacctttgaagaatggtgggtaattt 2379178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 9713696 - 9713727
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  9713696 ctaaattacctttgaagaatggtgggtaattt 9713727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 27243303 - 27243272
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  27243303 ctaaattacctttgaagaatggtgggtaattt 27243272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 27254878 - 27254847
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  27254878 ctaaattacctttgaagaatggtgggtaattt 27254847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 31940322 - 31940353
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  31940322 ctaaattacctttgaagaatggtgggtaattt 31940353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 4975570 - 4975540
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  4975570 taaattacctttgaagaatggtgggtaattt 4975540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 33622628 - 33622598
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  33622628 taaattacctttgaagaatggtgggtaattt 33622598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 40458933 - 40458905
Alignment:
Q  122 aattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||    
T  40458933 aattacctttgaagaatggtgggtaattt 40458905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 2275924 - 2275951
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2275924 attacctttgaagaatggtgggtaattt 2275951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 2714560 - 2714587
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2714560 attacctttgaagaatggtgggtaattt 2714587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 3490563 - 3490532
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  3490563 ctaaattacctttgaaaaatggtgggtaattt 3490532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 4447459 - 4447428
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  4447459 ctaaattacctttgaaaaatggtgggtaattt 4447428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5946058 - 5946085
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5946058 attacctttgaagaatggtgggtaattt 5946085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 6365997 - 6366024
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  6365997 attacctttgaagaatggtgggtaattt 6366024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 9303745 - 9303718
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  9303745 attacctttgaagaatggtgggtaattt 9303718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 10378316 - 10378347
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  10378316 ctaaattacctttgaaaaatggtgggtaattt 10378347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 13760819 - 13760792
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  13760819 attacctttgaagaatggtgggtaattt 13760792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 17718893 - 17718866
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  17718893 attacctttgaagaatggtgggtaattt 17718866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 22878402 - 22878429
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22878402 attacctttgaagaatggtgggtaattt 22878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 24080072 - 24080045
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  24080072 attacctttgaagaatggtgggtaattt 24080045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 31831126 - 31831099
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  31831126 attacctttgaagaatggtgggtaattt 31831099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 32114260 - 32114287
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  32114260 attacctttgaagaatggtgggtaattt 32114287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 32984248 - 32984221
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  32984248 attacctttgaagaatggtgggtaattt 32984221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 37301496 - 37301469
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37301496 attacctttgaagaatggtgggtaattt 37301469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 37419951 - 37419978
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37419951 attacctttgaagaatggtgggtaattt 37419978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 37956432 - 37956459
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37956432 attacctttgaagaatggtgggtaattt 37956459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 39915987 - 39915956
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  39915987 ctaaattatctttgaagaatggtgggtaattt 39915956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 41653906 - 41653933
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41653906 attacctttgaagaatggtgggtaattt 41653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 41843260 - 41843291
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  41843260 ctaaattacctttgaaaaatggtgggtaattt 41843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 41862231 - 41862258
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41862231 attacctttgaagaatggtgggtaattt 41862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 43328718 - 43328745
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  43328718 attacctttgaagaatggtgggtaattt 43328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 45236736 - 45236709
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  45236736 attacctttgaagaatggtgggtaattt 45236709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 3291015 - 3291046
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  3291015 ctaaattacctttgaagaatggtgggtaattt 3291046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 13329388 - 13329419
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  13329388 ctaaattacctttgaagaatggtgggtaattt 13329419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 28949009 - 28948978
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  28949009 ctaaattacctttgaagaatggtgggtaattt 28948978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 599903 - 599930
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  599903 attacctttgaagaatggtgggtaattt 599930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 960075 - 960048
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  960075 attacctttgaagaatggtgggtaattt 960048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 1970722 - 1970749
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  1970722 attacctttgaagaatggtgggtaattt 1970749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 2892199 - 2892226
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2892199 attacctttgaagaatggtgggtaattt 2892226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5882517 - 5882544
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5882517 attacctttgaagaatggtgggtaattt 5882544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 8615251 - 8615278
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  8615251 attacctttgaagaatggtgggtaattt 8615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 15965440 - 15965471
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  15965440 ctaaattatctttgaagaatggtgggtaattt 15965471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 16703377 - 16703404
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  16703377 attacctttgaagaatggtgggtaattt 16703404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 18101666 - 18101639
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  18101666 attacctttgaagaatggtgggtaattt 18101639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 19281226 - 19281199
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  19281226 attacctttgaagaatggtgggtaattt 19281199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 19415704 - 19415677
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  19415704 attacctttgaagaatggtgggtaattt 19415677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 22551232 - 22551205
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22551232 attacctttgaagaatggtgggtaattt 22551205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 26377379 - 26377348
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  26377379 ctaaattatctttgaagaatggtgggtaattt 26377348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 28947098 - 28947125
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  28947098 attacctttgaagaatggtgggtaattt 28947125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 30467774 - 30467747
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  30467774 attacctttgaagaatggtgggtaattt 30467747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 30743619 - 30743592
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  30743619 attacctttgaagaatggtgggtaattt 30743592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000003; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 6973070 - 6973101
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  6973070 ctaaattacctttgaagaatggtgggtaattt 6973101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 9171189 - 9171158
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  9171189 ctaaattacctttgaagaatggtgggtaattt 9171158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 9424756 - 9424725
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  9424756 ctaaattacctttgaagaatggtgggtaattt 9424725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 13957677 - 13957708
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  13957677 ctaaattacctttgaagaatggtgggtaattt 13957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 27503386 - 27503417
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  27503386 ctaaattacctttgaagaatggtgggtaattt 27503417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 35626045 - 35626076
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  35626045 ctaaattacctttgaagaatggtgggtaattt 35626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 36365609 - 36365578
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  36365609 ctaaattacctttgaagaatggtgggtaattt 36365578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 38015678 - 38015647
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  38015678 ctaaattacctttgaagaatggtgggtaattt 38015647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 42247946 - 42247915
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  42247946 ctaaattacctttgaagaatggtgggtaattt 42247915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 42658824 - 42658795
Alignment:
Q  121 aaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||    
T  42658824 aaattacctttgaagaatggtgggtaattt 42658795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 40279030 - 40279002
Alignment:
Q  122 aattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||    
T  40279030 aattacctttgaagaatggtgggtaattt 40279002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 3466852 - 3466825
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  3466852 attacctttgaagaatggtgggtaattt 3466825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 4149705 - 4149732
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  4149705 attacctttgaagaatggtgggtaattt 4149732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5137726 - 5137753
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5137726 attacctttgaagaatggtgggtaattt 5137753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5184983 - 5185010
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5184983 attacctttgaagaatggtgggtaattt 5185010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 5497280 - 5497311
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  5497280 ctaaattatctttgaagaatggtgggtaattt 5497311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 9374666 - 9374635
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  9374666 ctaaattacctttgaaaaatggtgggtaattt 9374635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 9527180 - 9527153
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  9527180 attacctttgaagaatggtgggtaattt 9527153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 15398653 - 15398626
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  15398653 attacctttgaagaatggtgggtaattt 15398626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 18479839 - 18479812
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  18479839 attacctttgaagaatggtgggtaattt 18479812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 19295737 - 19295768
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  19295737 ctaaattacctttgaaaaatggtgggtaattt 19295768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 23195412 - 23195381
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||| ||||||||||||||||||    
T  23195412 ctaaattacctttaaagaatggtgggtaattt 23195381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 24253393 - 24253420
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  24253393 attacctttgaagaatggtgggtaattt 24253420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 25831532 - 25831559
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  25831532 attacctttgaagaatggtgggtaattt 25831559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 33617592 - 33617623
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  33617592 ctaaattacctttgaaaaatggtgggtaattt 33617623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 38756659 - 38756632
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  38756659 attacctttgaagaatggtgggtaattt 38756632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 39932590 - 39932617
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  39932590 attacctttgaagaatggtgggtaattt 39932617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 40886198 - 40886171
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  40886198 attacctttgaagaatggtgggtaattt 40886171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 43326550 - 43326523
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  43326550 attacctttgaagaatggtgggtaattt 43326523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000003; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 5117602 - 5117571
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  5117602 ctaaattacctttgaagaatggtgggtaattt 5117571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 11972293 - 11972262
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  11972293 ctaaattacctttgaagaatggtgggtaattt 11972262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 15060453 - 15060422
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  15060453 ctaaattacctttgaagaatggtgggtaattt 15060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 20352006 - 20351975
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  20352006 ctaaattacctttgaagaatggtgggtaattt 20351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 27873712 - 27873681
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  27873712 ctaaattacctttgaagaatggtgggtaattt 27873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 34276554 - 34276585
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  34276554 ctaaattacctttgaagaatggtgggtaattt 34276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 34552326 - 34552357
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  34552326 ctaaattacctttgaagaatggtgggtaattt 34552357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 37239254 - 37239223
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  37239254 ctaaattacctttgaagaatggtgggtaattt 37239223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 46708905 - 46708874
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  46708905 ctaaattacctttgaagaatggtgggtaattt 46708874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 45633942 - 45633912
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  45633942 taaattacctttgaagaatggtgggtaattt 45633912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 146600 - 146573
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  146600 attacctttgaagaatggtgggtaattt 146573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 397413 - 397440
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  397413 attacctttgaagaatggtgggtaattt 397440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 2243469 - 2243496
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2243469 attacctttgaagaatggtgggtaattt 2243496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 3293187 - 3293156
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  3293187 ctaaattacctttgaaaaatggtgggtaattt 3293156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 6019939 - 6019966
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  6019939 attacctttgaagaatggtgggtaattt 6019966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 6285318 - 6285345
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  6285318 attacctttgaagaatggtgggtaattt 6285345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 9798476 - 9798503
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  9798476 attacctttgaagaatggtgggtaattt 9798503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 9998095 - 9998064
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  9998095 ctaaattacctttgaaaaatggtgggtaattt 9998064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 14017545 - 14017518
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  14017545 attacctttgaagaatggtgggtaattt 14017518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 17555657 - 17555630
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  17555657 attacctttgaagaatggtgggtaattt 17555630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 18462184 - 18462157
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  18462184 attacctttgaagaatggtgggtaattt 18462157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 21366780 - 21366753
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  21366780 attacctttgaagaatggtgggtaattt 21366753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 22468941 - 22468914
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22468941 attacctttgaagaatggtgggtaattt 22468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 22618683 - 22618656
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22618683 attacctttgaagaatggtgggtaattt 22618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 23437603 - 23437630
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  23437603 attacctttgaagaatggtgggtaattt 23437630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 29478371 - 29478398
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  29478371 attacctttgaagaatggtgggtaattt 29478398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 29777428 - 29777401
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  29777428 attacctttgaagaatggtgggtaattt 29777401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 31070244 - 31070217
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  31070244 attacctttgaagaatggtgggtaattt 31070217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 31881478 - 31881447
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||| ||||||||||||||||||||    
T  31881478 ctaaattacctatgaagaatggtgggtaattt 31881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 33289710 - 33289741
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||| ||||||    
T  33289710 ctaaattacctttgaagaatggtggataattt 33289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 33897666 - 33897639
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  33897666 attacctttgaagaatggtgggtaattt 33897639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 36532995 - 36532964
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||| ||||||||||    
T  36532995 ctaaattacctttgaagaatgatgggtaattt 36532964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 39077556 - 39077583
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  39077556 attacctttgaagaatggtgggtaattt 39077583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 41632177 - 41632150
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41632177 attacctttgaagaatggtgggtaattt 41632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 41949393 - 41949420
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41949393 attacctttgaagaatggtgggtaattt 41949420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 42033186 - 42033213
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  42033186 attacctttgaagaatggtgggtaattt 42033213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 42222302 - 42222329
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  42222302 attacctttgaagaatggtgggtaattt 42222329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 42557593 - 42557620
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  42557593 attacctttgaagaatggtgggtaattt 42557620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 43471866 - 43471839
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  43471866 attacctttgaagaatggtgggtaattt 43471839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 43890935 - 43890966
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  43890935 ctaaattacctttgaaaaatggtgggtaattt 43890966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 44984768 - 44984799
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  44984768 ctaaattacctttgaaaaatggtgggtaattt 44984799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 47344667 - 47344694
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  47344667 attacctttgaagaatggtgggtaattt 47344694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 47811913 - 47811944
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  47811913 ctaaattacctttgaaaaatggtgggtaattt 47811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 48313568 - 48313595
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  48313568 attacctttgaagaatggtgggtaattt 48313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 49881234 - 49881207
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  49881234 attacctttgaagaatggtgggtaattt 49881207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 50457981 - 50457954
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  50457981 attacctttgaagaatggtgggtaattt 50457954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 51363018 - 51363045
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  51363018 attacctttgaagaatggtgggtaattt 51363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 52688356 - 52688387
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||| |||||||||||||||||||    
T  52688356 ctaaattaccttagaagaatggtgggtaattt 52688387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 53854600 - 53854573
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  53854600 attacctttgaagaatggtgggtaattt 53854573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 54216320 - 54216351
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||| ||||||    
T  54216320 ctaaattacctttgaagaatggtggataattt 54216351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 54216900 - 54216869
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  54216900 ctaaattacctttgaaaaatggtgggtaattt 54216869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 54715042 - 54715073
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  54715042 ctaaattacctttgaaaaatggtgggtaattt 54715073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 54805789 - 54805762
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  54805789 attacctttgaagaatggtgggtaattt 54805762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 55056430 - 55056403
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  55056430 attacctttgaagaatggtgggtaattt 55056403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000003; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 20754568 - 20754537
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  20754568 ctaaattacctttgaagaatggtgggtaattt 20754537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 25641653 - 25641684
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  25641653 ctaaattacctttgaagaatggtgggtaattt 25641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 28048567 - 28048536
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  28048567 ctaaattacctttgaagaatggtgggtaattt 28048536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 31286957 - 31286926
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  31286957 ctaaattacctttgaagaatggtgggtaattt 31286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 34279885 - 34279854
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  34279885 ctaaattacctttgaagaatggtgggtaattt 34279854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 38156796 - 38156765
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  38156796 ctaaattacctttgaagaatggtgggtaattt 38156765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 41635964 - 41635933
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  41635964 ctaaattacctttgaagaatggtgggtaattt 41635933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 42589837 - 42589868
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  42589837 ctaaattacctttgaagaatggtgggtaattt 42589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 47809772 - 47809741
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  47809772 ctaaattacctttgaagaatggtgggtaattt 47809741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 51224201 - 51224170
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  51224201 ctaaattacctttgaagaatggtgggtaattt 51224170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 51415976 - 51416007
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  51415976 ctaaattacctttgaagaatggtgggtaattt 51416007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 54707384 - 54707353
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  54707384 ctaaattacctttgaagaatggtgggtaattt 54707353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 54401195 - 54401225
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  54401195 taaattacctttgaagaatggtgggtaattt 54401225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 2666011 - 2666038
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2666011 attacctttgaagaatggtgggtaattt 2666038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 5560203 - 5560176
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5560203 attacctttgaagaatggtgggtaattt 5560176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 7755477 - 7755450
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  7755477 attacctttgaagaatggtgggtaattt 7755450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 17665688 - 17665657
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||| ||||||||||||||||||||    
T  17665688 ctaaattacctatgaagaatggtgggtaattt 17665657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 22399108 - 22399135
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  22399108 attacctttgaagaatggtgggtaattt 22399135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 24100294 - 24100321
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  24100294 attacctttgaagaatggtgggtaattt 24100321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 27067149 - 27067122
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  27067149 attacctttgaagaatggtgggtaattt 27067122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 29625998 - 29625971
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  29625998 attacctttgaagaatggtgggtaattt 29625971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 32234568 - 32234541
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  32234568 attacctttgaagaatggtgggtaattt 32234541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 37313410 - 37313437
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37313410 attacctttgaagaatggtgggtaattt 37313437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 37324548 - 37324579
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||| ||||||||    
T  37324548 ctaaattacctttgaagaatggtaggtaattt 37324579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 39053405 - 39053432
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  39053405 attacctttgaagaatggtgggtaattt 39053432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 39141290 - 39141259
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||| ||||||||||||||||||||||    
T  39141290 ctaaattacttttgaagaatggtgggtaattt 39141259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 40131130 - 40131103
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  40131130 attacctttgaagaatggtgggtaattt 40131103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 40804681 - 40804654
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  40804681 attacctttgaagaatggtgggtaattt 40804654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 41293489 - 41293462
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41293489 attacctttgaagaatggtgggtaattt 41293462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 41464363 - 41464390
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  41464363 attacctttgaagaatggtgggtaattt 41464390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 42291853 - 42291880
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  42291853 attacctttgaagaatggtgggtaattt 42291880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 43021725 - 43021752
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  43021725 attacctttgaagaatggtgggtaattt 43021752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 43125842 - 43125869
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  43125842 attacctttgaagaatggtgggtaattt 43125869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 44806695 - 44806722
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  44806695 attacctttgaagaatggtgggtaattt 44806722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 47257804 - 47257831
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  47257804 attacctttgaagaatggtgggtaattt 47257831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 47511104 - 47511073
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  47511104 ctaaattacctttgaaaaatggtgggtaattt 47511073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 48726162 - 48726131
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||| ||||||||||||||||||    
T  48726162 ctaaattacctttaaagaatggtgggtaattt 48726131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 49130585 - 49130616
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  49130585 ctaaattacctttgaaaaatggtgggtaattt 49130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 49330048 - 49330075
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  49330048 attacctttgaagaatggtgggtaattt 49330075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 51102549 - 51102522
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  51102549 attacctttgaagaatggtgggtaattt 51102522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 51452921 - 51452894
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  51452921 attacctttgaagaatggtgggtaattt 51452894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 52628965 - 52628992
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  52628965 attacctttgaagaatggtgggtaattt 52628992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 55000342 - 55000311
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||| |||||||||||||||||||    
T  55000342 ctaaattaccttagaagaatggtgggtaattt 55000311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000003; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 145288 - 145319
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  145288 ctaaattacctttgaagaatggtgggtaattt 145319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 2000501 - 2000470
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  2000501 ctaaattacctttgaagaatggtgggtaattt 2000470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 2688893 - 2688862
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  2688893 ctaaattacctttgaagaatggtgggtaattt 2688862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 12333659 - 12333628
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  12333659 ctaaattacctttgaagaatggtgggtaattt 12333628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 27331304 - 27331335
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  27331304 ctaaattacctttgaagaatggtgggtaattt 27331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 28641456 - 28641425
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  28641456 ctaaattacctttgaagaatggtgggtaattt 28641425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 35158214 - 35158183
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  35158214 ctaaattacctttgaagaatggtgggtaattt 35158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 39301361 - 39301330
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  39301361 ctaaattacctttgaagaatggtgggtaattt 39301330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 40635224 - 40635252
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaa 147  Q
    |||||||||||||||||||||||||||||    
T  40635224 ctaaattacctttgaagaatggtgggtaa 40635252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 43356105 - 43356133
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaa 147  Q
    |||||||||||||||||||||||||||||    
T  43356105 ctaaattacctttgaagaatggtgggtaa 43356133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 746476 - 746503
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  746476 attacctttgaagaatggtgggtaattt 746503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 2325060 - 2325033
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  2325060 attacctttgaagaatggtgggtaattt 2325033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 3266302 - 3266333
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||| ||||||||||||||||||||||    
T  3266302 ctaaattacatttgaagaatggtgggtaattt 3266333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 4034602 - 4034629
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  4034602 attacctttgaagaatggtgggtaattt 4034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 4258496 - 4258527
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  4258496 ctaaattatctttgaagaatggtgggtaattt 4258527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 4609636 - 4609663
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  4609636 attacctttgaagaatggtgggtaattt 4609663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 6594629 - 6594602
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  6594629 attacctttgaagaatggtgggtaattt 6594602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 7892859 - 7892832
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  7892859 attacctttgaagaatggtgggtaattt 7892832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 8056632 - 8056663
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||| |||||||    
T  8056632 ctaaattacctttgaagaatggtgagtaattt 8056663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 10244753 - 10244726
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  10244753 attacctttgaagaatggtgggtaattt 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 10424605 - 10424632
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  10424605 attacctttgaagaatggtgggtaattt 10424632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 12730067 - 12730098
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||| ||||||||||    
T  12730067 ctaaattacctttgaagaatgatgggtaattt 12730098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 12814624 - 12814651
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  12814624 attacctttgaagaatggtgggtaattt 12814651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 12842113 - 12842140
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  12842113 attacctttgaagaatggtgggtaattt 12842140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 13815389 - 13815362
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  13815389 attacctttgaagaatggtgggtaattt 13815362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 21735064 - 21735033
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  21735064 ctaaattacctttgaaaaatggtgggtaattt 21735033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 23901789 - 23901816
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  23901789 attacctttgaagaatggtgggtaattt 23901816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 26710355 - 26710382
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  26710355 attacctttgaagaatggtgggtaattt 26710382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 27024425 - 27024452
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  27024425 attacctttgaagaatggtgggtaattt 27024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 27400413 - 27400440
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  27400413 attacctttgaagaatggtgggtaattt 27400440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 27651205 - 27651178
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  27651205 attacctttgaagaatggtgggtaattt 27651178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 27765026 - 27764995
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||| ||||||||||||||||||||||    
T  27765026 ctaaattacatttgaagaatggtgggtaattt 27764995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 28019992 - 28019965
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  28019992 attacctttgaagaatggtgggtaattt 28019965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 29687047 - 29687078
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||| |||||||||||||||||||||||    
T  29687047 ctaaattatctttgaagaatggtgggtaattt 29687078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 32327371 - 32327398
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  32327371 attacctttgaagaatggtgggtaattt 32327398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 32608390 - 32608417
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  32608390 attacctttgaagaatggtgggtaattt 32608417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 34518377 - 34518404
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  34518377 attacctttgaagaatggtgggtaattt 34518404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 37621041 - 37621014
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37621041 attacctttgaagaatggtgggtaattt 37621014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 38997111 - 38997138
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  38997111 attacctttgaagaatggtgggtaattt 38997138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 39103053 - 39103084
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  39103053 ctaaattacctttgaaaaatggtgggtaattt 39103084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 40735474 - 40735501
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  40735474 attacctttgaagaatggtgggtaattt 40735501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000003; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 3611143 - 3611174
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  3611143 ctaaattacctttgaagaatggtgggtaattt 3611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 4953059 - 4953090
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  4953059 ctaaattacctttgaagaatggtgggtaattt 4953090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 6626188 - 6626157
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  6626188 ctaaattacctttgaagaatggtgggtaattt 6626157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 13281726 - 13281695
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  13281726 ctaaattacctttgaagaatggtgggtaattt 13281695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 26472343 - 26472312
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  26472343 ctaaattacctttgaagaatggtgggtaattt 26472312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 29770677 - 29770708
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  29770677 ctaaattacctttgaagaatggtgggtaattt 29770708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 32448655 - 32448686
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  32448655 ctaaattacctttgaagaatggtgggtaattt 32448686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 34752478 - 34752447
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  34752478 ctaaattacctttgaagaatggtgggtaattt 34752447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 41467796 - 41467765
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  41467796 ctaaattacctttgaagaatggtgggtaattt 41467765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 42234847 - 42234878
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  42234847 ctaaattacctttgaagaatggtgggtaattt 42234878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 51057078 - 51057109
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||||||    
T  51057078 ctaaattacctttgaagaatggtgggtaattt 51057109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 2657311 - 2657341
Alignment:
Q  120 taaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||||||||||    
T  2657311 taaattacctttgaagaatggtgggtaattt 2657341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 50774224 - 50774254
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaatt 149  Q
    |||||||||||||||||||||||||||||||    
T  50774224 ctaaattacctttgaagaatggtgggtaatt 50774254  T

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Target: chr1; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 4156236 - 4156209
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  4156236 attacctttgaagaatggtgggtaattt 4156209  T

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Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 4243654 - 4243623
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  4243654 ctaaattacctttgaataatggtgggtaattt 4243623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5980079 - 5980106
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5980079 attacctttgaagaatggtgggtaattt 5980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 5981181 - 5981208
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  5981181 attacctttgaagaatggtgggtaattt 5981208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 6327718 - 6327691
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  6327718 attacctttgaagaatggtgggtaattt 6327691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 10928074 - 10928105
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  10928074 ctaaattacctttgaaaaatggtgggtaattt 10928105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 12891406 - 12891437
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||| ||||||||||||||||||    
T  12891406 ctaaattacctttaaagaatggtgggtaattt 12891437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 17995122 - 17995095
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  17995122 attacctttgaagaatggtgggtaattt 17995095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 23221100 - 23221073
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  23221100 attacctttgaagaatggtgggtaattt 23221073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 23932680 - 23932653
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  23932680 attacctttgaagaatggtgggtaattt 23932653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 23984766 - 23984793
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  23984766 attacctttgaagaatggtgggtaattt 23984793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 24245196 - 24245169
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  24245196 attacctttgaagaatggtgggtaattt 24245169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 24885512 - 24885539
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  24885512 attacctttgaagaatggtgggtaattt 24885539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 25058699 - 25058726
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  25058699 attacctttgaagaatggtgggtaattt 25058726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 26277188 - 26277215
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  26277188 attacctttgaagaatggtgggtaattt 26277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 26525060 - 26525033
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  26525060 attacctttgaagaatggtgggtaattt 26525033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 27983758 - 27983731
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  27983758 attacctttgaagaatggtgggtaattt 27983731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 30290074 - 30290043
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  30290074 ctaaattacctttgaaaaatggtgggtaattt 30290043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 31040720 - 31040747
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  31040720 attacctttgaagaatggtgggtaattt 31040747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 31308012 - 31308039
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  31308012 attacctttgaagaatggtgggtaattt 31308039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 31980106 - 31980079
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  31980106 attacctttgaagaatggtgggtaattt 31980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 33073218 - 33073249
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  33073218 ctaaattacctttgaaaaatggtgggtaattt 33073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 35692835 - 35692808
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  35692835 attacctttgaagaatggtgggtaattt 35692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 36003137 - 36003168
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||||||||||| |||||||    
T  36003137 ctaaattacctttgaagaatggtgagtaattt 36003168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 37620363 - 37620336
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  37620363 attacctttgaagaatggtgggtaattt 37620336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 38332030 - 38332003
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  38332030 attacctttgaagaatggtgggtaattt 38332003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 44544210 - 44544179
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||| ||||||    
T  44544210 ctaaattacctttgaagaatggtggataattt 44544179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 44661981 - 44662008
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  44661981 attacctttgaagaatggtgggtaattt 44662008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 45538164 - 45538191
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  45538164 attacctttgaagaatggtgggtaattt 45538191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 46428417 - 46428386
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  46428417 ctaaattacctttgaaaaatggtgggtaattt 46428386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 46616560 - 46616587
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  46616560 attacctttgaagaatggtgggtaattt 46616587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 46967212 - 46967185
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  46967212 attacctttgaagaatggtgggtaattt 46967185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 47317326 - 47317353
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  47317326 attacctttgaagaatggtgggtaattt 47317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 47383903 - 47383876
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  47383903 attacctttgaagaatggtgggtaattt 47383876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 48373515 - 48373542
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  48373515 attacctttgaagaatggtgggtaattt 48373542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 49254146 - 49254119
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  49254146 attacctttgaagaatggtgggtaattt 49254119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 51403178 - 51403151
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  51403178 attacctttgaagaatggtgggtaattt 51403151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Original strand, 3099 - 3126
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  3099 attacctttgaagaatggtgggtaattt 3126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 17913 - 17944
Alignment:
Q  119 ctaaattacctttgaagaatggtgggtaattt 150  Q
    |||||||||||||||| |||||||||||||||    
T  17913 ctaaattacctttgaaaaatggtgggtaattt 17944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 39727 - 39700
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  39727 attacctttgaagaatggtgggtaattt 39700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 150
Target Start/End: Complemental strand, 75415 - 75388
Alignment:
Q  123 attacctttgaagaatggtgggtaattt 150  Q
    ||||||||||||||||||||||||||||    
T  75415 attacctttgaagaatggtgggtaattt 75388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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