View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5838-1 (Length: 201)
Name: Solexa-NF5838-1
Description: NF5838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5838-1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 12851282 - 12851089
Alignment:
| Q |
8 |
cctttaactaccacttcggaagagtggatactgcgtcacacatagcttggattatgccataagtgagcctccattcttccatgttctttcctcatggtaa |
107 |
Q |
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| T |
12851282 |
cctttaactaccacttcggaagagtggatactgcctcacacatagcttggattatgccataagtgagcctccattcttccatgttctttcctcatggtaa |
12851183 |
T |
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| Q |
108 |
atttttctcaacttagccaattaattcctctaccagtgcctctattcacccccacaaaaatgaattaatcattcttcccatttcctctcccaac |
201 |
Q |
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| T |
12851182 |
gtttttctcaacttagccaattaattcctctacaagtgcctctattcacctccaccaaaatgaattaatcattctttccattttctctcccaac |
12851089 |
T |
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