View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5839-33 (Length: 115)
Name: Solexa-NF5839-33
Description: NF5839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5839-33 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 105; Significance: 6e-53; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 6e-53
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 31264900 - 31264792
Alignment:
| Q |
7 |
aaaaaactcacatggtatcacattcaccaaatattggtgctgaagtatatcacggttttagttagttttgctaacttaggtatagaatgttagactagac |
106 |
Q |
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| T |
31264900 |
aaaaaactcgcatggtatcacattcaccaaatattggtgctgaagtatatcacggttttagttagttttgctaacttaggtatagaatgttagactagac |
31264801 |
T |
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| Q |
107 |
tacacatct |
115 |
Q |
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||||||||| |
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| T |
31264800 |
tacacatct |
31264792 |
T |
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