View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5839-39 (Length: 52)
Name: Solexa-NF5839-39
Description: NF5839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5839-39 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 41; Significance: 0.000000000000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 27970481 - 27970525
Alignment:
| Q |
8 |
tttgagagcaaatgaagggtaatttaagtcccttgcaatcgcata |
52 |
Q |
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| T |
27970481 |
tttgagagcaaatgaagggtaatttaagtcccttgcagtcgcata |
27970525 |
T |
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