View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5840-14 (Length: 142)

Name: Solexa-NF5840-14
Description: NF5840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5840-14
Solexa-NF5840-14
[»] chr5 (47 HSPs)
chr5 (1-142)||(21910551-21910692)
chr5 (1-138)||(17814963-17815100)
chr5 (1-136)||(6512438-6512570)
chr5 (1-138)||(41566439-41566576)
chr5 (1-138)||(21072245-21072382)
chr5 (1-138)||(23412979-23413116)
chr5 (1-138)||(89427-89564)
chr5 (1-138)||(33022659-33022796)
chr5 (1-137)||(7745699-7745835)
chr5 (1-124)||(19536320-19536443)
chr5 (1-138)||(20550890-20551026)
chr5 (1-138)||(31117872-31118009)
chr5 (5-124)||(26784353-26784472)
chr5 (1-135)||(4887017-4887151)
chr5 (1-124)||(6499234-6499357)
chr5 (1-124)||(13545531-13545654)
chr5 (1-124)||(23881062-23881185)
chr5 (1-138)||(11993883-11994020)
chr5 (9-138)||(30742983-30743112)
chr5 (1-93)||(12352845-12352937)
chr5 (14-96)||(642754-642836)
chr5 (1-138)||(14086543-14086681)
chr5 (1-95)||(21099752-21099846)
chr5 (9-138)||(42243683-42243813)
chr5 (1-98)||(21199048-21199145)
chr5 (1-138)||(29138412-29138548)
chr5 (1-96)||(9398781-9398876)
chr5 (1-135)||(33933262-33933397)
chr5 (1-138)||(3245446-3245583)
chr5 (9-138)||(15516972-15517101)
chr5 (1-137)||(28139602-28139738)
chr5 (9-138)||(26765501-26765630)
chr5 (14-138)||(26759157-26759281)
chr5 (9-138)||(25096828-25096960)
chr5 (9-138)||(25154798-25154930)
chr5 (1-117)||(30115863-30115979)
chr5 (1-94)||(9088964-9089057)
chr5 (1-93)||(28464389-28464481)
chr5 (3-107)||(32160763-32160867)
chr5 (3-118)||(11208011-11208125)
chr5 (1-94)||(25930205-25930298)
chr5 (1-93)||(10848768-10848860)
chr5 (1-90)||(35932059-35932148)
chr5 (14-98)||(16607520-16607603)
chr5 (9-90)||(23391656-23391737)
chr5 (101-138)||(35986245-35986282)
chr5 (14-41)||(37406769-37406796)
[»] chr7 (70 HSPs)
chr7 (1-138)||(2913634-2913771)
chr7 (1-138)||(15088515-15088652)
chr7 (1-138)||(10883199-10883336)
chr7 (1-137)||(13302805-13302941)
chr7 (1-138)||(13137921-13138058)
chr7 (1-138)||(13880099-13880236)
chr7 (1-138)||(21692282-21692419)
chr7 (1-138)||(29935384-29935521)
chr7 (1-138)||(44467059-44467196)
chr7 (1-125)||(5000861-5000985)
chr7 (1-124)||(13730715-13730838)
chr7 (1-138)||(2500033-2500170)
chr7 (1-138)||(13648724-13648861)
chr7 (1-138)||(14426542-14426679)
chr7 (1-138)||(16316583-16316720)
chr7 (9-137)||(23279985-23280113)
chr7 (1-124)||(11792902-11793025)
chr7 (1-138)||(9069557-9069694)
chr7 (1-138)||(11319400-11319537)
chr7 (1-110)||(16309961-16310070)
chr7 (1-138)||(21695396-21695533)
chr7 (1-138)||(30025900-30026037)
chr7 (1-138)||(30944349-30944486)
chr7 (2-137)||(30945383-30945518)
chr7 (1-135)||(14193109-14193243)
chr7 (1-138)||(16111910-16112047)
chr7 (1-138)||(21283399-21283536)
chr7 (1-138)||(22578047-22578184)
chr7 (1-138)||(28409034-28409171)
chr7 (1-137)||(35952715-35952851)
chr7 (3-138)||(13018531-13018666)
chr7 (1-138)||(12366774-12366911)
chr7 (1-138)||(24788136-24788273)
chr7 (1-138)||(33605680-33605817)
chr7 (1-138)||(33691738-33691875)
chr7 (14-138)||(15467924-15468048)
chr7 (3-138)||(19237069-19237204)
chr7 (1-124)||(39284604-39284727)
chr7 (1-142)||(4821469-4821609)
chr7 (1-135)||(48236931-48237065)
chr7 (1-138)||(9709828-9709965)
chr7 (26-138)||(12174366-12174479)
chr7 (1-138)||(28622382-28622519)
chr7 (1-138)||(331640-331777)
chr7 (32-138)||(16543046-16543152)
chr7 (32-138)||(16622510-16622616)
chr7 (26-138)||(13880608-13880721)
chr7 (1-118)||(19711059-19711176)
chr7 (1-95)||(13260684-13260778)
chr7 (1-124)||(41842313-41842436)
chr7 (1-138)||(8182925-8183062)
chr7 (26-124)||(9098286-9098384)
chr7 (9-138)||(2265545-2265674)
chr7 (1-93)||(1293025-1293117)
chr7 (51-138)||(15704525-15704612)
chr7 (51-138)||(16556664-16556751)
chr7 (51-138)||(16608911-16608998)
chr7 (9-138)||(13894024-13894153)
chr7 (23-124)||(13032112-13032213)
chr7 (14-138)||(19339285-19339400)
chr7 (1-93)||(48062891-48062983)
chr7 (27-138)||(13692372-13692474)
chr7 (3-90)||(14425444-14425531)
chr7 (1-90)||(27871713-27871803)
chr7 (14-93)||(16412000-16412078)
chr7 (1-57)||(4494572-4494628)
chr7 (1-90)||(24794788-24794878)
chr7 (79-124)||(13472620-13472665)
chr7 (4-41)||(14745750-14745787)
chr7 (1-90)||(48805953-48806042)
[»] chr3 (70 HSPs)
chr3 (5-138)||(41495001-41495134)
chr3 (1-137)||(37467331-37467467)
chr3 (1-138)||(13780608-13780745)
chr3 (1-138)||(49642786-49642923)
chr3 (1-138)||(13948334-13948471)
chr3 (1-138)||(14393028-14393165)
chr3 (1-138)||(53056751-53056888)
chr3 (1-142)||(15903196-15903338)
chr3 (1-137)||(20646152-20646288)
chr3 (1-138)||(31303384-31303521)
chr3 (14-138)||(38177667-38177791)
chr3 (1-124)||(29951476-29951599)
chr3 (1-124)||(30000630-30000753)
chr3 (3-138)||(47207706-47207841)
chr3 (9-138)||(11223569-11223698)
chr3 (1-138)||(17238946-17239083)
chr3 (1-138)||(28582104-28582241)
chr3 (1-117)||(16032523-16032639)
chr3 (1-137)||(22804048-22804184)
chr3 (1-124)||(16658656-16658779)
chr3 (1-138)||(12963109-12963246)
chr3 (1-138)||(18121646-18121783)
chr3 (1-138)||(18142776-18142913)
chr3 (1-138)||(40799872-40800009)
chr3 (1-138)||(2561186-2561323)
chr3 (1-138)||(6090730-6090867)
chr3 (1-138)||(12726254-12726391)
chr3 (1-138)||(24775558-24775695)
chr3 (1-138)||(47405445-47405582)
chr3 (1-124)||(19888983-19889104)
chr3 (26-137)||(13824092-13824203)
chr3 (15-138)||(20627455-20627578)
chr3 (15-138)||(46349868-46349991)
chr3 (9-138)||(14955433-14955562)
chr3 (1-138)||(49553513-49553650)
chr3 (14-138)||(2785075-2785200)
chr3 (17-138)||(14969341-14969462)
chr3 (1-122)||(25398295-25398416)
chr3 (14-137)||(33583240-33583364)
chr3 (1-124)||(12388910-12389033)
chr3 (9-127)||(29855415-29855533)
chr3 (9-138)||(20725093-20725222)
chr3 (1-138)||(22140762-22140899)
chr3 (1-138)||(52920404-52920540)
chr3 (72-140)||(11869137-11869205)
chr3 (1-137)||(21640865-21641001)
chr3 (16-138)||(19249436-19249558)
chr3 (16-138)||(23538190-23538312)
chr3 (9-138)||(5213583-5213711)
chr3 (9-122)||(12968312-12968425)
chr3 (1-90)||(21605726-21605815)
chr3 (9-138)||(26417703-26417832)
chr3 (26-138)||(50300246-50300358)
chr3 (1-69)||(11868267-11868335)
chr3 (15-107)||(11909079-11909171)
chr3 (1-90)||(21636742-21636831)
chr3 (1-93)||(46796436-46796528)
chr3 (36-107)||(45858804-45858875)
chr3 (1-69)||(30054310-30054378)
chr3 (1-48)||(1728129-1728176)
chr3 (1-48)||(49666519-49666566)
chr3 (3-107)||(51341011-51341107)
chr3 (1-90)||(9700108-9700197)
chr3 (3-48)||(37412605-37412650)
chr3 (26-90)||(40850991-40851055)
chr3 (3-107)||(12752683-12752779)
chr3 (96-138)||(49666438-49666480)
chr3 (9-41)||(13557777-13557809)
chr3 (14-93)||(6253430-6253508)
chr3 (3-46)||(10529346-10529389)
[»] chr2 (67 HSPs)
chr2 (1-138)||(25829127-25829264)
chr2 (1-138)||(30666982-30667119)
chr2 (1-137)||(13963949-13964085)
chr2 (5-138)||(20568720-20568853)
chr2 (1-138)||(23235000-23235137)
chr2 (2-138)||(30621210-30621346)
chr2 (2-138)||(30623831-30623967)
chr2 (1-124)||(18376890-18377013)
chr2 (1-138)||(22188072-22188209)
chr2 (1-138)||(24377094-24377231)
chr2 (3-138)||(21537218-21537353)
chr2 (1-138)||(24576028-24576165)
chr2 (1-138)||(25037229-25037366)
chr2 (1-138)||(25041336-25041473)
chr2 (1-124)||(10009734-10009857)
chr2 (1-124)||(40782470-40782593)
chr2 (1-138)||(9015340-9015475)
chr2 (1-138)||(19540409-19540546)
chr2 (9-138)||(6574093-6574223)
chr2 (1-138)||(31800857-31800994)
chr2 (1-124)||(24779336-24779459)
chr2 (1-124)||(28140603-28140726)
chr2 (14-137)||(38781405-38781528)
chr2 (26-138)||(20152005-20152117)
chr2 (1-124)||(24850650-24850773)
chr2 (1-138)||(28711668-28711805)
chr2 (9-135)||(22317594-22317721)
chr2 (9-138)||(6392634-6392764)
chr2 (1-126)||(39037624-39037749)
chr2 (26-138)||(45087154-45087266)
chr2 (9-138)||(26619071-26619200)
chr2 (1-138)||(41121689-41121826)
chr2 (1-96)||(22455002-22455097)
chr2 (15-138)||(28701199-28701322)
chr2 (1-138)||(23595539-23595674)
chr2 (1-130)||(35743978-35744107)
chr2 (34-138)||(22260432-22260536)
chr2 (1-96)||(25189391-25189486)
chr2 (9-138)||(22802461-22802590)
chr2 (14-138)||(30557290-30557415)
chr2 (9-138)||(31327936-31328065)
chr2 (9-138)||(31334657-31334786)
chr2 (1-138)||(33074219-33074356)
chr2 (14-138)||(34321906-34322030)
chr2 (1-93)||(28550933-28551025)
chr2 (1-93)||(44840427-44840519)
chr2 (1-98)||(23184317-23184411)
chr2 (15-138)||(22272139-22272263)
chr2 (1-93)||(22776303-22776395)
chr2 (1-93)||(22781681-22781773)
chr2 (1-90)||(31968061-31968150)
chr2 (1-138)||(40332080-40332208)
chr2 (9-93)||(1587048-1587132)
chr2 (1-93)||(14581508-14581600)
chr2 (14-138)||(19115089-19115213)
chr2 (14-138)||(44881173-44881297)
chr2 (15-94)||(3277037-3277116)
chr2 (14-93)||(22785670-22785749)
chr2 (14-142)||(18702744-18702872)
chr2 (1-38)||(22258194-22258231)
chr2 (14-122)||(18430926-18431034)
chr2 (15-119)||(10896422-10896525)
chr2 (3-107)||(1084009-1084105)
chr2 (86-124)||(7609039-7609077)
chr2 (3-41)||(19498010-19498048)
chr2 (14-46)||(24814645-24814677)
chr2 (26-69)||(23392707-23392750)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-138)||(18596-18733)
[»] chr8 (60 HSPs)
chr8 (1-138)||(12757786-12757923)
chr8 (1-138)||(39693526-39693663)
chr8 (1-138)||(602743-602880)
chr8 (1-138)||(19156187-19156324)
chr8 (1-138)||(16188975-16189112)
chr8 (1-138)||(17525752-17525889)
chr8 (1-138)||(16207297-16207434)
chr8 (1-138)||(16681326-16681463)
chr8 (1-138)||(17914450-17914587)
chr8 (1-138)||(29693306-29693443)
chr8 (1-124)||(18718992-18719115)
chr8 (1-138)||(17441831-17441967)
chr8 (1-142)||(17797413-17797554)
chr8 (1-138)||(23185249-23185386)
chr8 (1-120)||(18679806-18679925)
chr8 (1-124)||(18321196-18321319)
chr8 (1-124)||(24646329-24646452)
chr8 (26-124)||(33082873-33082971)
chr8 (1-138)||(24551265-24551402)
chr8 (9-138)||(19943234-19943364)
chr8 (1-138)||(40845410-40845547)
chr8 (1-138)||(45538462-45538599)
chr8 (1-138)||(30421451-30421589)
chr8 (3-138)||(15336111-15336246)
chr8 (3-138)||(15425176-15425311)
chr8 (3-138)||(15516480-15516615)
chr8 (1-124)||(17267465-17267588)
chr8 (1-124)||(20382431-20382554)
chr8 (1-138)||(1237628-1237765)
chr8 (9-137)||(18722670-18722798)
chr8 (9-137)||(18731015-18731143)
chr8 (1-124)||(17701736-17701859)
chr8 (16-138)||(23263635-23263757)
chr8 (1-98)||(43644887-43644984)
chr8 (9-137)||(18685421-18685549)
chr8 (9-138)||(9320567-9320697)
chr8 (1-135)||(21932874-21933008)
chr8 (66-142)||(20255584-20255660)
chr8 (1-138)||(19707497-19707634)
chr8 (1-138)||(18121132-18121266)
chr8 (1-138)||(22673769-22673906)
chr8 (1-138)||(22663107-22663244)
chr8 (16-138)||(22461661-22461783)
chr8 (1-138)||(36105186-36105323)
chr8 (20-124)||(19956378-19956482)
chr8 (1-94)||(14989518-14989611)
chr8 (1-74)||(25164061-25164134)
chr8 (3-119)||(45567943-45568059)
chr8 (1-94)||(6407717-6407810)
chr8 (1-94)||(18151713-18151806)
chr8 (14-138)||(24833080-24833204)
chr8 (4-90)||(13430699-13430785)
chr8 (14-98)||(18772624-18772707)
chr8 (9-93)||(43639782-43639866)
chr8 (3-41)||(7018416-7018454)
chr8 (3-41)||(20259652-20259690)
chr8 (3-41)||(21046282-21046320)
chr8 (14-90)||(21301026-21301102)
chr8 (51-107)||(21540985-21541041)
chr8 (26-90)||(33560295-33560359)
[»] chr4 (61 HSPs)
chr4 (1-138)||(37985593-37985730)
chr4 (1-137)||(9140905-9141041)
chr4 (1-138)||(3395583-3395720)
chr4 (1-138)||(19666365-19666502)
chr4 (1-138)||(29680525-29680662)
chr4 (6-138)||(12601099-12601231)
chr4 (1-138)||(19884695-19884832)
chr4 (1-138)||(55380283-55380420)
chr4 (1-138)||(16632433-16632570)
chr4 (1-125)||(19621055-19621179)
chr4 (1-138)||(12811159-12811293)
chr4 (1-138)||(10692844-10692981)
chr4 (1-138)||(10906610-10906747)
chr4 (1-138)||(29121363-29121500)
chr4 (1-138)||(14904337-14904474)
chr4 (9-138)||(22675501-22675630)
chr4 (1-138)||(37435516-37435653)
chr4 (3-138)||(14604887-14605023)
chr4 (1-138)||(10072928-10073065)
chr4 (9-138)||(45833395-45833524)
chr4 (9-138)||(54679931-54680060)
chr4 (26-138)||(3483739-3483851)
chr4 (1-124)||(19911875-19911999)
chr4 (1-126)||(40846092-40846217)
chr4 (1-138)||(56034567-56034704)
chr4 (14-138)||(413008-413132)
chr4 (1-124)||(6641677-6641800)
chr4 (1-138)||(13576095-13576232)
chr4 (9-138)||(8105638-8105768)
chr4 (1-138)||(6517478-6517615)
chr4 (9-126)||(17247245-17247362)
chr4 (60-138)||(14833448-14833526)
chr4 (9-138)||(25651085-25651214)
chr4 (18-138)||(16940026-16940146)
chr4 (9-138)||(11915701-11915830)
chr4 (9-138)||(56533042-56533172)
chr4 (1-107)||(16853496-16853602)
chr4 (1-138)||(3105400-3105537)
chr4 (1-138)||(17398664-17398792)
chr4 (1-93)||(23750515-23750605)
chr4 (17-138)||(11901196-11901317)
chr4 (14-121)||(17788044-17788152)
chr4 (1-90)||(22190839-22190928)
chr4 (14-135)||(41114754-41114875)
chr4 (14-53)||(8685509-8685548)
chr4 (9-100)||(17540396-17540487)
chr4 (1-90)||(20977450-20977539)
chr4 (1-90)||(38513871-38513960)
chr4 (1-90)||(40860660-40860749)
chr4 (72-135)||(55731844-55731906)
chr4 (1-90)||(9751569-9751658)
chr4 (1-97)||(14154015-14154112)
chr4 (14-118)||(1672395-1672499)
chr4 (14-118)||(1674870-1674974)
chr4 (26-89)||(3499682-3499745)
chr4 (9-90)||(27188667-27188748)
chr4 (3-93)||(33378406-33378488)
chr4 (1-66)||(39419787-39419852)
chr4 (9-97)||(10661190-10661277)
chr4 (9-97)||(10875335-10875422)
chr4 (64-124)||(15139283-15139343)
[»] chr1 (56 HSPs)
chr1 (1-138)||(33256296-33256433)
chr1 (1-138)||(33276468-33276605)
chr1 (1-138)||(22201681-22201818)
chr1 (1-138)||(28492349-28492486)
chr1 (1-138)||(1577865-1578002)
chr1 (2-138)||(32785882-32786018)
chr1 (1-138)||(19717522-19717659)
chr1 (1-138)||(22600127-22600264)
chr1 (15-140)||(35401821-35401946)
chr1 (1-124)||(12284421-12284544)
chr1 (1-138)||(22427302-22427439)
chr1 (1-124)||(10757419-10757542)
chr1 (1-138)||(22153855-22153992)
chr1 (1-138)||(25448511-25448648)
chr1 (1-138)||(36134188-36134324)
chr1 (1-138)||(48704202-48704339)
chr1 (1-138)||(1900343-1900480)
chr1 (1-138)||(16235241-16235378)
chr1 (1-138)||(20954418-20954555)
chr1 (1-138)||(22464754-22464891)
chr1 (1-135)||(29215795-29215929)
chr1 (1-138)||(21191810-21191947)
chr1 (1-138)||(35040164-35040301)
chr1 (1-138)||(38282565-38282701)
chr1 (9-138)||(39200937-39201066)
chr1 (1-124)||(30893090-30893213)
chr1 (1-138)||(2267087-2267224)
chr1 (14-136)||(2834701-2834823)
chr1 (9-138)||(30572203-30572332)
chr1 (1-124)||(21028791-21028914)
chr1 (15-138)||(23036472-23036595)
chr1 (1-137)||(2268529-2268662)
chr1 (1-138)||(12613760-12613896)
chr1 (1-138)||(48570176-48570313)
chr1 (18-124)||(17024923-17025029)
chr1 (9-138)||(14263396-14263525)
chr1 (1-138)||(21702812-21702949)
chr1 (1-137)||(44821491-44821627)
chr1 (1-138)||(2327384-2327522)
chr1 (1-96)||(26702116-26702211)
chr1 (1-138)||(46088987-46089115)
chr1 (14-138)||(7309830-7309953)
chr1 (15-121)||(18896559-18896665)
chr1 (14-107)||(7745066-7745159)
chr1 (1-94)||(10250984-10251077)
chr1 (1-90)||(21121057-21121146)
chr1 (1-90)||(21135153-21135242)
chr1 (17-90)||(42284642-42284715)
chr1 (14-90)||(21984607-21984683)
chr1 (1-90)||(23024786-23024875)
chr1 (1-90)||(37642246-37642335)
chr1 (1-49)||(19215610-19215658)
chr1 (9-90)||(21204916-21204997)
chr1 (3-46)||(17371042-17371085)
chr1 (15-90)||(17018590-17018664)
chr1 (3-46)||(44201011-44201054)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-138)||(32484-32621)
scaffold0084 (1-138)||(49331-49468)
scaffold0084 (3-119)||(339-455)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-138)||(60015-60152)
scaffold0026 (1-137)||(7925-8061)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-135)||(25953-26087)
scaffold0083 (35-137)||(44680-44782)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-138)||(474-611)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-138)||(14647-14784)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-138)||(377534-377671)
scaffold0004 (7-138)||(244259-244390)
scaffold0004 (1-124)||(220237-220359)
scaffold0004 (1-138)||(211397-211534)
[»] chr6 (49 HSPs)
chr6 (1-138)||(20112713-20112850)
chr6 (1-135)||(18378313-18378447)
chr6 (1-138)||(15302199-15302336)
chr6 (2-138)||(23284564-23284700)
chr6 (1-138)||(15987232-15987370)
chr6 (1-138)||(12715433-12715570)
chr6 (1-138)||(13602171-13602308)
chr6 (1-110)||(24116827-24116936)
chr6 (1-137)||(9717842-9717978)
chr6 (2-138)||(20730717-20730853)
chr6 (1-138)||(32544264-32544401)
chr6 (14-138)||(13435544-13435668)
chr6 (9-137)||(14100454-14100582)
chr6 (3-138)||(29918018-29918153)
chr6 (1-135)||(18435555-18435689)
chr6 (1-138)||(15954702-15954839)
chr6 (9-138)||(20487931-20488060)
chr6 (1-138)||(19086157-19086284)
chr6 (3-124)||(19623980-19624101)
chr6 (1-138)||(22802140-22802277)
chr6 (2-138)||(12423261-12423397)
chr6 (1-133)||(16265168-16265300)
chr6 (9-137)||(21618251-21618379)
chr6 (1-138)||(26972241-26972376)
chr6 (1-138)||(15531637-15531774)
chr6 (1-138)||(16336126-16336263)
chr6 (26-137)||(19688790-19688901)
chr6 (15-138)||(21625114-21625236)
chr6 (4-138)||(12348995-12349129)
chr6 (9-138)||(19833045-19833175)
chr6 (1-138)||(22076420-22076557)
chr6 (3-138)||(26943577-26943712)
chr6 (15-138)||(10640431-10640555)
chr6 (1-89)||(25594067-25594155)
chr6 (9-138)||(16877220-16877349)
chr6 (15-122)||(19470683-19470790)
chr6 (14-106)||(21235137-21235229)
chr6 (32-138)||(34451681-34451787)
chr6 (1-138)||(33351941-33352076)
chr6 (1-90)||(19066079-19066168)
chr6 (81-137)||(25597558-25597614)
chr6 (1-79)||(17381520-17381598)
chr6 (1-90)||(19482751-19482840)
chr6 (14-98)||(25930485-25930568)
chr6 (3-108)||(14051425-14051529)
chr6 (9-108)||(14070106-14070204)
chr6 (1-48)||(17316628-17316675)
chr6 (3-46)||(20635720-20635763)
chr6 (3-46)||(22386803-22386846)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-138)||(13570-13707)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-138)||(12208-12345)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-138)||(1689-1826)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-138)||(10083-10220)
scaffold0161 (1-69)||(14816-14884)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-138)||(630-767)
scaffold1359 (3-90)||(1778-1865)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-137)||(5666-5802)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-138)||(22675-22812)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-138)||(15116-15253)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-138)||(78341-78478)
[»] scaffold0035 (3 HSPs)
scaffold0035 (1-138)||(19447-19584)
scaffold0035 (1-138)||(99182-99317)
scaffold0035 (17-94)||(29809-29885)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-138)||(9968-10105)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-138)||(36750-36887)
scaffold0120 (1-138)||(42118-42255)
[»] scaffold0012 (1 HSPs)
scaffold0012 (9-138)||(215472-215601)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-142)||(90026-90167)
scaffold0003 (14-93)||(712-790)
[»] scaffold0005 (2 HSPs)
scaffold0005 (3-138)||(212355-212491)
scaffold0005 (60-138)||(6173-6251)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-138)||(1659-1796)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-138)||(6715-6852)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-138)||(19030-19167)
scaffold0217 (1-138)||(9559-9696)
scaffold0217 (1-138)||(22106-22243)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-138)||(20946-21083)
[»] scaffold0251 (1 HSPs)
scaffold0251 (7-135)||(7708-7836)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-124)||(15792-15916)
[»] scaffold0023 (1 HSPs)
scaffold0023 (15-138)||(103585-103708)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-138)||(1674-1811)
[»] scaffold0861 (1 HSPs)
scaffold0861 (20-137)||(4923-5040)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-138)||(27404-27541)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-138)||(5577-5714)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-138)||(60802-60939)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-121)||(6006-6126)
[»] scaffold0324 (1 HSPs)
scaffold0324 (4-124)||(9958-10078)
[»] scaffold0176 (1 HSPs)
scaffold0176 (15-138)||(9168-9291)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-98)||(9902-9999)
scaffold0047 (60-138)||(30282-30360)
[»] scaffold0040 (1 HSPs)
scaffold0040 (15-124)||(1510-1619)
[»] scaffold0414 (1 HSPs)
scaffold0414 (9-138)||(7131-7260)
[»] scaffold0273 (1 HSPs)
scaffold0273 (9-138)||(5634-5762)
[»] scaffold0334 (2 HSPs)
scaffold0334 (32-124)||(9825-9917)
scaffold0334 (1-36)||(7823-7858)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-138)||(2706-2842)
[»] scaffold0011 (3 HSPs)
scaffold0011 (3-119)||(164940-165056)
scaffold0011 (56-138)||(65403-65485)
scaffold0011 (56-138)||(144448-144530)
[»] scaffold1434 (1 HSPs)
scaffold1434 (67-138)||(761-832)
[»] scaffold0530 (1 HSPs)
scaffold0530 (18-81)||(2027-2090)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-128)||(25384-25511)
scaffold0247 (1-41)||(15811-15851)
[»] scaffold0064 (1 HSPs)
scaffold0064 (9-124)||(43908-44023)
[»] scaffold0022 (5 HSPs)
scaffold0022 (1-124)||(159054-159177)
scaffold0022 (60-142)||(39483-39565)
scaffold0022 (60-142)||(137543-137625)
scaffold0022 (1-58)||(37401-37458)
scaffold0022 (1-58)||(135461-135518)
[»] scaffold0007 (1 HSPs)
scaffold0007 (43-138)||(143129-143224)
[»] scaffold1747 (1 HSPs)
scaffold1747 (9-95)||(1324-1410)
[»] scaffold1745 (1 HSPs)
scaffold1745 (9-95)||(1-87)
[»] scaffold0056 (3 HSPs)
scaffold0056 (16-138)||(36159-36281)
scaffold0056 (1-90)||(25688-25777)
scaffold0056 (1-90)||(34827-34916)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-138)||(3303-3440)
[»] scaffold0211 (1 HSPs)
scaffold0211 (3-118)||(15617-15732)
[»] scaffold0081 (1 HSPs)
scaffold0081 (3-138)||(40638-40773)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-103)||(74580-74682)
[»] scaffold0132 (1 HSPs)
scaffold0132 (9-118)||(38080-38189)
[»] scaffold0527 (1 HSPs)
scaffold0527 (33-138)||(7963-8068)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-93)||(17785-17877)
[»] scaffold0220 (1 HSPs)
scaffold0220 (15-107)||(1803-1895)
[»] scaffold0387 (1 HSPs)
scaffold0387 (4-90)||(7383-7469)
[»] scaffold0352 (1 HSPs)
scaffold0352 (9-88)||(846-925)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-66)||(2738-2803)
[»] scaffold0078 (1 HSPs)
scaffold0078 (9-90)||(31808-31888)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-90)||(87623-87712)
[»] scaffold0908 (1 HSPs)
scaffold0908 (9-69)||(3939-3999)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-39)||(6005-6043)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-90)||(731-812)
[»] scaffold0269 (1 HSPs)
scaffold0269 (9-69)||(7292-7352)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-46)||(6589-6621)
[»] scaffold1321 (1 HSPs)
scaffold1321 (15-46)||(1002-1033)
[»] scaffold1263 (1 HSPs)
scaffold1263 (15-46)||(1195-1226)
[»] scaffold0177 (1 HSPs)
scaffold0177 (3-46)||(20444-20487)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-36)||(84394-84429)


Alignment Details
Target: chr5 (Bit Score: 130; Significance: 1e-67; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21910551 - 21910692
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21910551 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21910650  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  21910651 tttcaaaataatcgttgcttcacttttccagtcttttgtaat 21910692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17814963 - 17815100
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  17814963 agagacacaaactgagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgctttcaaatcc 17815062  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  17815063 tttcagaatagtcgttgcttcactcttccagtcttctg 17815100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6512570 - 6512438
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||    
T  6512570 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaag---ccaatgccttcaaatcc 6512474  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttc 136  Q
    |||||||||||||||||||||||| |||||||||||    
T  6512473 tttcaaaatagtcgttgcttcactcttccagtcttc 6512438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 41566576 - 41566439
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| || ||||||||||||||||||||    
T  41566576 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgccttcaaatcc 41566477  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  41566476 tttcaaaatagacgttgcttcacttttctagtcttctg 41566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21072382 - 21072245
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  21072382 agagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 21072283  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||  ||||||||    
T  21072282 tttcaaaatagttgttgcttcactcttctggtcttctg 21072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 23413116 - 23412979
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||    
T  23413116 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgctttcaaatcc 23413017  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||| ||||||||||||| |||  ||||||||    
T  23413016 tttcaaaataatcgttgcttcactcttctggtcttctg 23412979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 89564 - 89427
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||| ||||||| |    
T  89564 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaatgctcttcaaagaacaagcatgcaatgctttcaaattc 89465  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||  ||||||||    
T  89464 tttcaaaatagtcgttgcttcactcttctggtcttctg 89427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 33022659 - 33022796
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  33022659 agagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcc 33022758  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33022759 tttcaaactagtcgttgcttcacttttccagtcttctg 33022796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 7745835 - 7745699
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  7745835 agagacaaaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 7745736  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||| ||||||||||| ||| ||||||||    
T  7745735 tttcaaaatagttgttgcttcactcttctagtcttct 7745699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19536443 - 19536320
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||    
T  19536443 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatcc 19536344  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||||||| |||||||||||||||    
T  19536343 attcaaaaaagtcgttgcttcact 19536320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20550890 - 20551026
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||     
T  20550890 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctttaaagaacaagcatccaatgccttcaaatct 20550988  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| ||| ||| |||||    
T  20550989 tttcaaaatagtcgttgcttcactcttctagttttctg 20551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 31117872 - 31118009
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||  |||||| ||||||||||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||||||| |    
T  31117872 agagacaaaaacagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaattc 31117971  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  31117972 tttcaaattagtcgttgcttcacttttccagtcttctg 31118009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 26784353 - 26784472
Alignment:
Q  5 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | | | |||||||||||    
T  26784353 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccagttcttccaaatcctttc 26784452  T
Q  105 aaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||    
T  26784453 aaaatagtcgttgcttcact 26784472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4887017 - 4887151
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||   ||||||||| |||||||||  ||||||||||||||||||||||||||||     
T  4887017 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatct 4887116  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    |||||||||||||||||||  ||||||||||||||    
T  4887117 tttcaaaatagtcgttgctatacttttccagtctt 4887151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6499234 - 6499357
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||| | |    
T  6499234 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccgatgccttcaacttc 6499333  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  ||||||  |||||||||||    
T  6499334 atttgaaatagatgttgcttcact 6499357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13545654 - 13545531
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  13545654 agagacaaaaatagagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 13545555  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||| |||| |||||||||||    
T  13545554 tttcaaagtagttgttgcttcact 13545531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 23881062 - 23881185
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||| | |    
T  23881062 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgccttcaacttc 23881161  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||||||||||||||||    
T  23881162 atttgaattagtcgttgcttcact 23881185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11993883 - 11994020
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||||||   ||||||||| |||||||||  ||||||||||||||||||| |||||||||    
T  11993883 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcc 11993982  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     |||||| ||| |||||||||||| |||||||||||||    
T  11993983 cttcaaattagccgttgcttcactattccagtcttctg 11994020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 30742983 - 30743112
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  ||||| || ||||||||||||||||||||||||||||    
T  30742983 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaa 30743082  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||||  | ||||||||||||||    
T  30743083 taatcgttgctttgcctttccagtcttctg 30743112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12352937 - 12352845
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  12352937 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaatgcaagcatccaatgcctt 12352845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 642836 - 642754
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaa 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  642836 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgccttcaa 642754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14086681 - 14086543
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatc 99  Q
    ||||||| |||| ||||||||||| ||| |||||||||||||||||||  ||||||||| |||||||||   || |||||||||||||||| ||||||||    
T  14086681 agagacaaaaacagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatc 14086582  T
Q  100 ctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
      |||||||||| ||||||||||||||||||||||||||    
T  14086581 acttcaaaatagccgttgcttcacttttccagtcttctg 14086543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21099846 - 21099752
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttca 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||    
T  21099846 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgttcttcaaaaggcaagcatccaatgccttca 21099752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 42243683 - 42243813
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||| ||||| |||||||||  ||| ||||| |||| |||| |||||||||||||||||    
T  42243683 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaaatcctttcaaa 42243782  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| |||||||||||||||||||||||||    
T  42243783 atagttgttgcttcacttttccagtcttctg 42243813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21199145 - 21199048
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||    
T  21199145 agagacacaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgccttcaaat 21199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 29138548 - 29138412
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||  ||||| ||  |||||||||  ||||| ||||||||||||||||| |||||    
T  29138548 agagacacaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatcc 29138449  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||| ||||||  || ||||||||||||||    
T  29138448 ttccaaaatagttgttgctatac-tttccagtcttctg 29138412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9398876 - 9398781
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaa 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |  |||||| ||||||||||||    
T  9398876 agagacacaaactgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgccttcaa 9398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 33933262 - 33933397
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatc 99  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| | | |||||||||   || |||||||||||||||| || |||||    
T  33933262 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgtttaaatc 33933361  T
Q  100 ctttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33933362 ctttcaaaatagttgttgcttcacttttccagtctt 33933397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3245583 - 3245446
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||| ||||||||  ||| |    
T  3245583 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattc 3245484  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||  |||||||||||||||||    
T  3245483 tttcaaaatagccgttgctatacttttccagtcttctg 3245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 15516972 - 15517101
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||| ||  ||| |||||  ||||| ||||||||||||||||||||||||| |||||    
T  15516972 aaacagagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaa 15517071  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||  |||||||||||||||||    
T  15517072 tagccgttgctatacttttccagtcttctg 15517101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 28139602 - 28139738
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||   |||| ||| ||||||||   ||||| |||||||||||| |||  |||||    
T  28139602 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaatcc 28139701  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||  |||||| |||||||||    
T  28139702 tttcaaaatagtcgttgctatactttttcagtcttct 28139738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 26765501 - 26765630
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||  ||||||||||||||||||||||  ||||| | | | |||||||  ||||| ||||||||||||||||||||||||| |||||    
T  26765501 aaacagagtagtggaggcagtggttgtacacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaa 26765600  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||| ||||||  |||||||||||||||||    
T  26765601 tagttgttgctatacttttccagtcttctg 26765630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 26759157 - 26759281
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||   |||| | | | |||||||  ||||| ||||||||||||||||||||||||| ||||||||||    
T  26759157 gagtagtggaggtagtggttgtacacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtc 26759256  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    |||| |  |||||||||||||||||    
T  26759257 gttgttatacttttccagtcttctg 26759281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 25096960 - 25096828
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgta---aacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 105  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||| |    ||||||||| ||||||||||||||||||| |||||||||||||      
T  25096960 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttg 25096861  T
Q  106 aaatagtcgttgcttcacttttccagtcttctg 138  Q
    || || ||||||||||||| |||  ||||||||    
T  25096860 aattaatcgttgcttcactcttctggtcttctg 25096828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 25154930 - 25154798
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgta---aacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 105  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||| |    ||||||||| ||||||||||||||||||| |||||||||||||      
T  25154930 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttg 25154831  T
Q  106 aaatagtcgttgcttcacttttccagtcttctg 138  Q
    || || ||||||||||||| |||  ||||||||    
T  25154830 aattaatcgttgcttcactcttctggtcttctg 25154798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30115979 - 30115863
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| |||||||||  ||||| ||||||| |||||| |  |||||    
T  30115979 agagacaaaaacagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcccttcaatcc 30115880  T
Q  101 tttcaaaatagtcgttg 117  Q
    |||||||||||||||||    
T  30115879 tttcaaaatagtcgttg 30115863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9088964 - 9089057
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  |||||  ||||||||||||||||    
T  9088964 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttc 9089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28464481 - 28464389
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  28464481 agagacaaaaacagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 28464389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 32160763 - 32160867
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   || |||||| |||||||||  ||| | |||||||||||||||||||||||||    
T  32160763 agacataaacagagtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 32160862  T
Q  103 tcaaa 107  Q
    |||||    
T  32160863 tcaaa 32160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 11208125 - 11208011
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||| |||||||||||| || ||||||||| |||||||||  |||    |||||||||||| ||||||||  |    
T  11208125 agacaaaaacagagtagtggaggtagtggttatacacttcgtac-atagtactttgtcaacgctctttgaaggctgagcatccaatgcattcaaatctct 11208027  T
Q  103 tcaaaatagtcgttgc 118  Q
    ||||||||||||||||    
T  11208026 tcaaaatagtcgttgc 11208011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25930298 - 25930205
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| ||||||| ||||||||||||||||| |||||||||  ||||| ||| |||||||||  || || |||||||||||||||||    
T  25930298 agagacaaaaacagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttc 25930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10848768 - 10848860
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||  ||| | ||| |||||||||  ||||| ||||||| ||||||||    
T  10848768 agagacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgcctt 10848860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35932148 - 35932059
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| ||| |||||  ||||| |||||||||||||    
T  35932148 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 35932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 16607520 - 16607603
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||   |||| ||| ||||||| |||| ||||||||||||||||    
T  16607520 gagtagtggagatagtggttgtacactt-gtactattgtccttttccaacgttctccaaagaataagcttccaatgccttcaaat 16607603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 23391737 - 23391656
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| |||||||| |||||||| |||||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  23391737 aaacagagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgc 23391656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 35986282 - 35986245
Alignment:
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  35986282 tttcaaaatagtcgttgccacacttttccagtcttctg 35986245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 41
Target Start/End: Complemental strand, 37406796 - 37406769
Alignment:
Q  14 gagtagtggagatagtggttgtacactt 41  Q
    ||||||||||||||||||||||||||||    
T  37406796 gagtagtggagatagtggttgtacactt 37406769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 2e-65; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2913771 - 2913634
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2913771 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 2913672  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  2913671 tttcaaaatagtcgttgctccacttttctagtcttctg 2913634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15088515 - 15088652
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  15088515 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgtcttcaaatcc 15088614  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| || ||||||||||    
T  15088615 tttcaaaatagtcgttgcttcactctttcagtcttctg 15088652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10883336 - 10883199
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  10883336 agagacgcaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgccttcaaatcc 10883237  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10883236 tttcaaaatagtcgttgcttcactcttccagtcttctg 10883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 13302805 - 13302941
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  13302805 agagacacaaactgagtagtggtgatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcc 13302904  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  13302905 tttcaaaatagtcgttgcttcactcttctagtcttct 13302941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13138058 - 13137921
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  13138058 agagacataaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatct 13137959  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  13137958 tttcaaaatagttgttgcttcactctttcagtcttctg 13137921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13880099 - 13880236
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  13880099 agagacacaaagtgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgccttcaaatcc 13880198  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||  || |||||||||    
T  13880199 tttcaaaatagtcgttgcttcactcgtcgagtcttctg 13880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21692282 - 21692419
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21692282 agagacacaaactgagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21692381  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||| ||||||||||||||| |||  ||||||||    
T  21692382 tttcaaaacagtcgttgcttcactcttctggtcttctg 21692419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 29935521 - 29935384
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |||||||||    
T  29935521 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgctttcaaatcc 29935422  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||  ||||||||    
T  29935421 tttcaaaatagtcgttgcttcactcttctggtcttctg 29935384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 44467059 - 44467196
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  44467059 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 44467158  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  44467159 tttcaaaatagtcgttgcttcactcttctagtcttctg 44467196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5000985 - 5000861
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||| |||||||||    
T  5000985 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgttcttcaaagaacaagcattcaatgctttcaaatcc 5000886  T
Q  101 tttcaaaatagtcgttgcttcactt 125  Q
    |||||||||||||||||||||||||    
T  5000885 tttcaaaatagtcgttgcttcactt 5000861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13730838 - 13730715
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  13730838 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcattcaaatct 13730739  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||| ||||||||||||    
T  13730738 tttcaaaatagccgttgcttcact 13730715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2500033 - 2500170
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| | ||||||||||||| |||||||||    
T  2500033 agagacacaaactgagtagtggagaaagtggttgtacactttgtacaattgtactttgtcaactctcttcaaaggataagcatccaatgctttcaaatcc 2500132  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  2500133 tttcaaaatagttgttgcttcactcttccagtcttctg 2500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13648724 - 13648861
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  13648724 agagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagatcaagcatccaatgtctttaaatcc 13648823  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||||||| || ||||||||||    
T  13648824 tttcaaaatagccgttgcttcactctttcagtcttctg 13648861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14426542 - 14426679
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  14426542 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 14426641  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14426642 tttcaaaatagtcgttgcttcacttttccagtcttctg 14426679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16316720 - 16316583
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||    
T  16316720 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaatcc 16316621  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||  ||||||||||| |||  ||||||||    
T  16316620 tttcaaaatagctgttgcttcactcttctggtcttctg 16316583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 23280113 - 23279985
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||     
T  23280113 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaac 23280014  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    ||| ||||||| |||||||||||||||||    
T  23280013 tagccgttgctccacttttccagtcttct 23279985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 11792902 - 11793025
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| |    
T  11792902 agagacacaaactaagtggtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgctttcaaatgc 11793001  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  11793002 tttcaaaatagtcgttgcttcact 11793025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9069557 - 9069694
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |  |||||||||||| ||||||||| ||||||    
T  9069557 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgcctttaaatcc 9069656  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9069657 tttcaaaatagtcgttgcttcactcttccagtcttctg 9069694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11319400 - 11319537
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| ||||||||||| |||||||||    
T  11319400 agagacacaaactgagtagtggagatagtggttgtacacttcgtgcaattgtaatttgtcaacgctcttcaaaaaacacgcatccaatgcattcaaatcc 11319499  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||| ||||||| || ||||||||||    
T  11319500 tttcaaaatagttgttacttcactctttcagtcttctg 11319537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16310070 - 16309961
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  16310070 agagacacaaactgagtagtgtagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 16309971  T
Q  101 tttcaaaata 110  Q
    ||||||||||    
T  16309970 tttcaaaata 16309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21695396 - 21695533
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  21695396 agagacacaaactgagtagttgaggtactggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatca 21695495  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||  ||||||||||||||||||| |||  ||||||||    
T  21695496 ttttgaaatagtcgttgcttcactcttctggtcttctg 21695533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30025900 - 30026037
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||     
T  30025900 agagacacaaactgagtagtagagatattggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgccttcaattct 30025999  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||||||| || ||||||||||    
T  30026000 tttcaaaatagccgttgcttcactctttcagtcttctg 30026037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30944486 - 30944349
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||  ||||| |||||||||||||||||||||||    
T  30944486 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 30944387  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  30944386 tttcaaaatagttgttgcttcacttttccaatcttctg 30944349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 30945518 - 30945383
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||||||||    
T  30945518 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgccttcaaatcct 30945419  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  30945418 ttcaaaatagttgttgcttcacttttccaatcttct 30945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14193109 - 14193243
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||| ||||||||||||||||    
T  14193109 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgccttcaaatcc 14193208  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    |||||||||||||||||||||||| ||||||||||    
T  14193209 tttcaaaatagtcgttgcttcactcttccagtctt 14193243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16112047 - 16111910
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| | |    
T  16112047 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaatttc 16111948  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||| |||||||||||||||||| | ||||||||    
T  16111947 ttccaaaaaagtcgttgcttcactttttccgtcttctg 16111910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21283536 - 21283399
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||    
T  21283536 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgccttcaaatcc 21283437  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||| | |||||||| ||| |||||||||||||    
T  21283436 tttcaaaatggacgttgctttactcttccagtcttctg 21283399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22578184 - 22578047
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||| ||||||||||||||||    
T  22578184 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaatcattcaatgccttcaaatcc 22578085  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  22578084 tttcaaaatagttgttgcttcactcttacagtcttctg 22578047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28409034 - 28409171
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  28409034 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcc 28409133  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||| | ||||||||||| ||| |||||||||    
T  28409134 tttcaaaataattgttgcttcactcttctagtcttctg 28409171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 35952851 - 35952715
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||||  | |||||| ||||||||||||||||||||    
T  35952851 agagacaaaaacagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcc 35952752  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  35952751 tttcaaaatagtcgttgcttcacttttccagtcttct 35952715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 13018666 - 13018531
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||||||||||||||||| | | |    
T  13018666 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaatccagcatccaatgccttcaacttcat 13018567  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    | |||||||||||||||||||| | | |||||||||    
T  13018566 ttaaaatagtcgttgcttcactctcctagtcttctg 13018531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12366911 - 12366774
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||||||| |||||||||    
T  12366911 agagacacagactgattagtggaggtagtggttgtatacttcgtacaattgtactatgtcaacgctcttcaaagaacagacatccaatgctttcaaatcc 12366812  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| | |||||||||||    
T  12366811 tttcaaaatagttgttgcttcactctcccagtcttctg 12366774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24788136 - 24788273
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||  ||||||||||| |||||||||||||||||    
T  24788136 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgccttcaaatcc 24788235  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||| ||||||||||||| ||| |||||||||    
T  24788236 tttcaaaatattcgttgcttcactcttctagtcttctg 24788273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 33605680 - 33605817
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  ||||||| || |||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  33605680 agagacaaaaacatagtagtgaaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 33605779  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||| |||||||| |||||||||| ||||    
T  33605780 tttcaaaatagtcattgcttcaattttccagtcatctg 33605817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33691875 - 33691738
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||| || ||||| |||| |    
T  33691875 agagacaaaaacagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaaattc 33691776  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  33691775 tttcaaaatagtcgttgcttcactcttccagtcttctg 33691738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 15467924 - 15468048
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  15467924 gagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatccttttaaaatagtc 15468023  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    |||| |||||| |||||||||||||    
T  15468024 gttgattcactcttccagtcttctg 15468048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 19237204 - 19237069
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||    
T  19237204 agacacaaacagagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctt 19237105  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| ||| |||||||||||| |||  ||||||||    
T  19237104 tcaaagtagccgttgcttcactcttctggtcttctg 19237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39284727 - 39284604
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |    
T  39284727 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgccttcaaattc 39284628  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||||||||| ||||||    
T  39284627 atttgaattagtcgttgtttcact 39284604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4821469 - 4821609
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||| | |||||||||  ||||||||||||||||||||||||||| |    
T  4821469 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaat-c 4821567  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    ||||||||||| ||||||| |||||||| |||||||||||||    
T  4821568 tttcaaaatagccgttgctccacttttctagtcttctgtaat 4821609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 48237065 - 48236931
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||  ||||||||||||||    
T  48237065 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaatcc 48236966  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    ||||||| | ||||||||||||| ||| |||||||    
T  48236965 tttcaaacttgtcgttgcttcaccttttcagtctt 48236931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9709965 - 9709828
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||||||  |||||||| ||||||||||||| ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||    
T  9709965 agagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcc 9709866  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||| |||||||||||| |||||||||||||    
T  9709865 tttcaaactaggcgttgcttcactcttccagtcttctg 9709828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 12174479 - 12174366
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||||||||||||||||  ||||||||| |||||||||   || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12174479 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcact 12174380  T
Q  125 tttccagtcttctg 138  Q
    ||||||||||||||    
T  12174379 tttccagtcttctg 12174366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 28622519 - 28622382
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||| ||| |||||||||||||| ||||||||||||||||||| ||||| |||  || ||||| ||||||||||||||||||||    
T  28622519 agagacaaaaacagagaagtagaggtagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaatcc 28622420  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||| |||||||||||||||| ||| |||||    
T  28622419 tttcaaattagccgttgcttcacttttctagtattctg 28622382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 331640 - 331777
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||  |  || |||||||||||||||||| ||||    
T  331640 agagacacaaactgtgtagtggaggtagtggttgtacacttcgtacatttgtactttgtcaacgct-tttgagcaataagcatccaatgccttcagatcc 331738  T
Q  101 tttc-aaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||  ||||||||||| |||||||||||||    
T  331739 tttcaaaaatagctgttgcttcactcttccagtcttctg 331777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 16543152 - 16543046
Alignment:
Q  32 ttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccag 131  Q
    |||||||| ||||||||  ||||||||| |  ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16543152 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16543053  T
Q  132 tcttctg 138  Q
    |||||||    
T  16543052 tcttctg 16543046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 16622510 - 16622616
Alignment:
Q  32 ttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccag 131  Q
    |||||||| ||||||||  ||||||||| |  ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16622510 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16622609  T
Q  132 tcttctg 138  Q
    |||||||    
T  16622610 tcttctg 16622616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 13880608 - 13880721
Alignment:
Q  26 tagtggttgtac-acttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||    
T  13880608 tagtggttgtaccacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccagtgccttcaaatccttttgaattagtcgttgcttcact 13880707  T
Q  125 tttccagtcttctg 138  Q
     ||| |||||||||    
T  13880708 cttctagtcttctg 13880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19711176 - 19711059
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||  ||||||||| || ||||||  ||| | |||||||||||||||||||||||    
T  19711176 agagacaaaaacagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgccttcaaatcc 19711077  T
Q  101 tttcaaaatagtcgttgc 118  Q
    ||||||| ||||||||||    
T  19711076 tttcaaattagtcgttgc 19711059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13260778 - 13260684
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttca 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | || ||||||| ||||||||||||||||||| ||||    
T  13260778 agagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgctttca 13260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 41842436 - 41842313
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||| ||| ||| |||||| |||||||| |||||| | |    
T  41842436 agagacacaaactgagtagtgcaggtagtggttgtacacttcgtacaattgtactctgtcaacgcactttaaaaaacaagtatccaatgtcttcaacttc 41842337  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||||||||||||||||    
T  41842336 atttgaattagtcgttgcttcact 41842313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 8182925 - 8183062
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||   ||| | ||| |||||||||  ||||| ||||||| | || |||  |||||    
T  8182925 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcc 8183024  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||  |||||||||||||||||    
T  8183025 tttcaaaatagttgttgctatacttttccagtcttctg 8183062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 9098384 - 9098286
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||| ||||| ||||||||||||  || ||| ||||||||||||    
T  9098384 tagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaaacatctaatgcattcaaatccttttgaattagccgttgcttcact 9098286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 2265674 - 2265545
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||| ||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||  ||| ||||||||||||| |||||    
T  2265674 aaacagagcagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaa 2265575  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||  |||||| ||||||||||    
T  2265574 tagccgttgctatactttttcagtcttctg 2265545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1293025 - 1293117
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  1293025 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 1293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 15704612 - 15704525
Alignment:
Q  51 gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| ||| |||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  15704612 gtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctg 15704525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 16556751 - 16556664
Alignment:
Q  51 gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| | |||||||||  |||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  16556751 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16556664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 16608911 - 16608998
Alignment:
Q  51 gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| | |||||||||  |||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  16608911 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16608998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 13894153 - 13894024
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||| | |||||||||| |||| | || ||| || ||||||||| ||| |||||||||||||||||||  ||     
T  13894153 aaacagagtagtggaggtagtggttgtacacgttgtacaattgtcctttttcaatgctttttaaagaacaaacattcaatgccttcaaatccttttgaat 13894054  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||| |||  ||||||||    
T  13894053 tagccgttgcttcactcttctggtcttctg 13894024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 13032213 - 13032112
Alignment:
Q  23 agatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttca 122  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| | | |||||| |||| |||||| | | ||  ||||||| |||||||||    
T  13032213 agatagtggttgtacacttcgtacaattatactttgtcaacgctcttcaaaaagccagcatctaatgtcttcaacttcatttgaaatagttgttgcttca 13032114  T
Q  123 ct 124  Q
    ||    
T  13032113 ct 13032112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 19339400 - 19339285
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||         | |||||||||||||    
T  19339400 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatg---------catttcaaaatagtc 19339310  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    |||||  ||||||||||||||||||    
T  19339309 gttgccacacttttccagtcttctg 19339285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48062983 - 48062891
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| ||||| |||||||||||||||||| ||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  48062983 agagacagaaacagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 48062891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 13692372 - 13692474
Alignment:
Q  27 agtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttt 126  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  ||||| |||||||||||||          ||||||||||||| ||||||||||| |    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatg---------tctttcaaaatagttgttgcttcactct 13692462  T
Q  127 tccagtcttctg 138  Q
    ||||||||||||    
T  13692463 tccagtcttctg 13692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 14425444 - 14425531
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||  ||||| |||||||||||||    
T  14425444 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 14425531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27871713 - 27871803
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgc-tcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||  ||||| |||||||||||||    
T  27871713 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgc 27871803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 16412000 - 16412078
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    |||||||||||||| |||||||||| || |||| ||||| ||||   |||||||||||||||| ||||||||||||||||    
T  16412000 gagtagtggagataatggttgtacaatt-gtactattgtccttttcgaacgctcttcaaagaataagcatccaatgcctt 16412078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4494572 - 4494628
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtacttt 57  Q
    ||||||| |||  ||||||||||| ||| ||||||||||||||||||||||||||||    
T  4494572 agagacaaaaagagagtagtggaggtagcggttgtacacttcgtacaattgtacttt 4494628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24794878 - 24794788
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgc-tcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| ||||| ||||  | ||| |||||||||||||    
T  24794878 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaggaataagcatccaatgc 24794788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 13472665 - 13472620
Alignment:
Q  79 agcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||| |||||| |||||||||||||||||||| |||||||||||    
T  13472665 agcatcaaatgccatcaaatcctttcaaaatagttgttgcttcact 13472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14745787 - 14745750
Alignment:
Q  4 gacacaaactgagtagtggagatagtggttgtacactt 41  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  14745787 gacaaaaacagagtagtggagatagtggttgtacactt 14745750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48806042 - 48805953
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| || | ||||||||||  |||||||||||||||| |||| |  ||||| ||| |||||||||  |||||  ||||||||||||    
T  48806042 agagacaaaatcagagtagtggaagtagtggttgtacactttgtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgc 48805953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 2e-65; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 41495001 - 41495134
Alignment:
Q  5 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41495001 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 41495100  T
Q  105 aaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||| |||||||||||||    
T  41495101 aaaatagtcgttgcttcactcttccagtcttctg 41495134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37467331 - 37467467
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37467331 agagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 37467430  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37467431 tttcaaaatagtcgttgcttcactcttccagtcttct 37467467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13780745 - 13780608
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  13780745 agagacacaaactgagtcgtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgccttcaaatcc 13780646  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| || ||||||||||    
T  13780645 tttcaaaatagtcgttgcttcactctttcagtcttctg 13780608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 49642923 - 49642786
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  49642923 agagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgccttcaaatcc 49642824  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  49642823 tttcaaaatagtcgttgcttcactcttccagtcttctg 49642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13948334 - 13948471
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  13948334 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 13948433  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13948434 tttcaaaatagtcgttgcttcactattccagtcttctg 13948471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14393165 - 14393028
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  14393165 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 14393066  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| |||||| |||  ||||||||    
T  14393065 tttcaaaatagtcgttgtttcactcttctggtcttctg 14393028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 53056888 - 53056751
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  53056888 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 53056789  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53056788 tttcaaaatagtcgttgcttcacttttccagtcttctg 53056751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15903196 - 15903338
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaac-aagcatccaatgccttcaaatc 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||||| ||||||||    
T  15903196 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaaagcatgcaatgctttcaaatc 15903295  T
Q  100 ctttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  15903296 ctttcaaaatagtcgttgcttcactcttctagtcttctgtaat 15903338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 20646152 - 20646288
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  20646152 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 20646251  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    ||||||||||| |||||||||||| |||  |||||||    
T  20646252 tttcaaaatagacgttgcttcactcttctggtcttct 20646288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 31303384 - 31303521
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||    
T  31303384 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatcaaatgtcttcaaatcc 31303483  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||| ||||||| || ||||||||||    
T  31303484 tttcaaaatagttgttccttcactctttcagtcttctg 31303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 38177791 - 38177667
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  38177791 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgccttcaaatcctttcaaaatagtt 38177692  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||||| ||||| |||||||    
T  38177691 gttgcttcactcttccaatcttctg 38177667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29951599 - 29951476
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29951599 agagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcc 29951500  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  29951499 tttcaaaatagttgttgcttcact 29951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 30000753 - 30000630
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  30000753 agagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcc 30000654  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  30000653 tttcaaaatagttgttgcttcact 30000630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 47207706 - 47207841
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||| ||    
T  47207706 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatt 47207805  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| ||| ||||||||||||||||||||||||||    
T  47207806 tcaaactagccgttgcttcacttttccagtcttctg 47207841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 11223569 - 11223698
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  11223569 aaacagagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaa 11223668  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||| ||||||||||    
T  11223669 tagtcgttgcttcactttttcagtcttctg 11223698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17239083 - 17238946
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  17239083 agagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcc 17238984  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||| ||||||||| |||  ||||||||    
T  17238983 tttcaaaatagtcgatgcttcactcttctggtcttctg 17238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28582104 - 28582241
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||||| | ||||||    
T  28582104 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgccattaaatcc 28582203  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  28582204 tttcaaaatagtcgttgcttcactcttccaatcttctg 28582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16032523 - 16032639
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16032523 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcc 16032622  T
Q  101 tttcaaaatagtcgttg 117  Q
    |||||||||||||||||    
T  16032623 tttcaaaatagtcgttg 16032639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22804184 - 22804048
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||    
T  22804184 agagacacaaattgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatcgaatgccttcaagtcc 22804085  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    ||||||||||| |||||||||||| |||  |||||||    
T  22804084 tttcaaaatagccgttgcttcactcttctggtcttct 22804048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16658779 - 16658656
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||||| |||||||||    
T  16658779 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgctttcaaatcc 16658680  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  16658679 tttcaaaatagtcgttgcttcact 16658656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12963246 - 12963109
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||| ||    
T  12963246 agagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatgctttcaaaacc 12963147  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||  |||||||| ||||||||||| | |||||||||||    
T  12963146 ttctaaaatagttgttgcttcactctcccagtcttctg 12963109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18121783 - 18121646
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||| ||||||    
T  18121783 agagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcc 18121684  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  18121683 tttcaaaatagttgttgcttcactcttccagtcttctg 18121646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18142913 - 18142776
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||| ||||||    
T  18142913 agagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcc 18142814  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  18142813 tttcaaaatagttgttgcttcactcttccagtcttctg 18142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40799872 - 40800009
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||| ||||||||| |    
T  40799872 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagtatccaattccttcaaatac 40799971  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  40799972 tttcaaactagtcgttgcttcgcttttccagtcttctg 40800009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2561186 - 2561323
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||| ||||  |||||||||||||||||  ||||||||||    
T  2561186 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaatcc 2561285  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  2561286 tttcaaaatagttgttgcttcactcttccagtcttctg 2561323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6090730 - 6090867
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| || ||||||||||||| ||||||||||||||||    
T  6090730 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgccttcaaatcc 6090829  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||  ||||||||||| ||| |||||||||    
T  6090830 tttcaaattagatgttgcttcactcttctagtcttctg 6090867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12726391 - 12726254
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||| |||||  ||||||||||||| |||||||||    
T  12726391 agagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgctttcaaatcc 12726292  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||| ||||||| ||| |||||||||    
T  12726291 tttcaaaatagtcgttacttcactcttctagtcttctg 12726254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 24775695 - 24775558
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||||||| || ||||||  ||||| |||||| ||||||||||||||||    
T  24775695 agagacaaaaacagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcc 24775596  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||||||||||||||    
T  24775595 tttcaaaatagttgttgcttcacttttccagtcttctg 24775558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 47405582 - 47405445
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||  |||||||| |||| |||||||||||||||    
T  47405582 agagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttgaagaacaaacatcaaatgccttcaaatcc 47405483  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||| ||||||||| |||||||||||||||    
T  47405482 tttcaaactagttgttgcttcatttttccagtcttctg 47405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19889104 - 19888983
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| | ||| ||  || ||||||||||||||||||||||| |||||||||    
T  19889104 agagacacaaactgag--gtggagatagtggttgtacacttcgtacaattgtaatatgtcaatcctattcaaagaacaagcatccaatgctttcaaatcc 19889007  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  19889006 tttcaaaatagtcgttgcttcact 19888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 13824092 - 13824203
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||| |||||||||||| |||||||||||     
T  13824092 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcatttcaaaatagttgttgcttcactc 13824191  T
Q  126 ttccagtcttct 137  Q
    ||||||||||||    
T  13824192 ttccagtcttct 13824203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 20627578 - 20627455
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  |  |||||||||||||||||||||||||| ||||||||||| |    
T  20627578 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaaatagttg 20627479  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||    
T  20627478 ttgcttcacttttccagtcttctg 20627455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 46349991 - 46349868
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||| || | |||   |||||||||||||||||||||||||||||||||||| ||||||    
T  46349991 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcg 46349892  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||    
T  46349891 ttgcttcacttttccagtcttctg 46349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 14955433 - 14955562
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  ||||| ||||||||||||||||||||| |||||||||    
T  14955433 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaa 14955532  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||| ||||||| || ||||||||||||||    
T  14955533 tagttgttgctttacctttccagtcttctg 14955562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 49553650 - 49553513
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||   |||||||| ||||||||||||||||||||    
T  49553650 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgccttcaaatcc 49553551  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||  ||||||||| || || |||||||    
T  49553550 tttcaaaatagtcactgcttcactctttcaatcttctg 49553513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 2785075 - 2785200
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagt 112  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||||||   || |||||||||||||||| |||||||||||||||||||||    
T  2785075 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagt 2785174  T
Q  113 cgttgcttcacttttccagtcttctg 138  Q
     |||||||||||||||||||||||||    
T  2785175 tgttgcttcacttttccagtcttctg 2785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 14969341 - 14969462
Alignment:
Q  17 tagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgtt 116  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||| ||  ||||| |||||||||||||| |||||||||||||||||||| |||    
T  14969341 tagtggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgtt 14969440  T
Q  117 gcttcacttttccagtcttctg 138  Q
    |||| ||| |||||||||||||    
T  14969441 gctttactcttccagtcttctg 14969462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25398416 - 25398295
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||  |||| |||  || ||||||||||||||||    
T  25398416 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctttgaagagcaaatatgcaatgccttcaaatcc 25398317  T
Q  101 tttcaaaatagtcgttgcttca 122  Q
    ||||||||||||||||||||||    
T  25398316 tttcaaaatagtcgttgcttca 25398295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 33583240 - 33583364
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagt 112  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||||   || |||||||||||||||| ||||||||||||||||||||     
T  33583240 gagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagc 33583339  T
Q  113 cgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||||    
T  33583340 cgttgcttcacttttccagtcttct 33583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 12389033 - 12388910
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||| |||| |    
T  12389033 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgccttaaaattc 12388934  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||  || ||||||| ||||||||    
T  12388933 ttttgaattagtcgtagcttcact 12388910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 29855415 - 29855533
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||| ||  ||||||||||||||||||||||||||| ||||||||     
T  29855415 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgccttcaaattctttcaaac 29855514  T
Q  109 tagtcgttgcttcactttt 127  Q
    ||| |||||||||||||||    
T  29855515 tagccgttgcttcactttt 29855533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 20725093 - 20725222
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| |||| | ||||||||||||  ||||||||||||||| |||||||||||||  ||     
T  20725093 aaacagagtagtggagatagttattgtacacttcgtacaattgtcctttttcaacgctcttcaagaaacaagcatccaatgtcttcaaatccttttgaat 20725192  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||| |||  ||||||||    
T  20725193 tagtcgttgcttcactcttctggtcttctg 20725222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22140762 - 22140899
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||   ||||| ||| |||||||||  ||||||||||||||||||  |||||| ||    
T  22140762 agagacaaaaacagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaaacc 22140861  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     |||||||||||||||| ||||||| || |||||||||    
T  22140862 cttcaaaatagtcgttggttcacttatctagtcttctg 22140899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 52920404 - 52920540
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| | ||||| ||| ||||||||||| ||||||||||||| || ||||| ||||||||| |||||||||||||| ||||||||||||| |    
T  52920404 agagacaaaaacagggtagtagaggtagtggttgtatacttcgtacaattttaatttgtcaacgctctttaaagaacaagcatcaaatgccttcaaatac 52920503  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||| ||| |||| ||||||||||| ||| |||||||||    
T  52920504 ttt-aaattagttgttgcttcactcttctagtcttctg 52920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 11869137 - 11869205
Alignment:
Q  72 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgta 140  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  11869137 aagaacaagcatccaatgccttcaaatcctttcaaactagacgttgcttcacttttccagtcttctgta 11869205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 21640865 - 21641001
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  |||||||||||||||||||||||||||||||| ||  ||||| ||| |||||||||  || || ||||||||||||| ||  |||||    
T  21640865 agagacaaaaatagagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatcc 21640964  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    || |||||||| |||||||  ||||||||||||||||    
T  21640965 ttccaaaatagccgttgctatacttttccagtcttct 21641001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 19249558 - 19249436
Alignment:
Q  16 gtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgt 115  Q
    |||||||||  |||||||||||||||||||||||||| || | | | ||||||||||||||||| |||||||||||||||||||||||  || |||  ||    
T  19249558 gtagtggagtaagtggttgtacacttcgtacaattgtcctatttcagcgctcttcaaagaacaaacatccaatgccttcaaatccttttgaattagctgt 19249459  T
Q  116 tgcttcacttttccagtcttctg 138  Q
    ||||||||| |||  ||||||||    
T  19249458 tgcttcactcttctggtcttctg 19249436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 23538312 - 23538190
Alignment:
Q  16 gtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgt 115  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||| |||  |||||| |||||| |||||||||||||| ||||  |||||  |||    
T  23538312 gtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctctaaagaataagcattcaatgccttcaaattcttttgaaataaccgt 23538213  T
Q  116 tgcttcacttttccagtcttctg 138  Q
    || |||| | |||||||||||||    
T  23538212 tgtttcattcttccagtcttctg 23538190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 5213583 - 5213711
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  |||||  || |||||| || ||  || ||||||| ||||||||||||||||| |||||    
T  5213583 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgcttttgaat-aataagcatctaatgccttcaaatccttccaaaa 5213681  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||| ||||||  |||||||||||||||||    
T  5213682 tagttgttgctatacttttccagtcttctg 5213711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 12968312 - 12968425
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||   |||| ||||||||||| ||| ||||||||||||||||| ||||  ||     
T  12968312 aaacagagtagtggagatagtggttgtacacttcgtataattgtccttttccaacgttcttcaaagaataagtatccaatgccttcaaattcttttgaat 12968411  T
Q  109 tagtcgttgcttca 122  Q
    |||||||| |||||    
T  12968412 tagtcgttacttca 12968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21605815 - 21605726
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||  ||||| |||||||||||||    
T  21605815 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 21605726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 26417832 - 26417703
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||  |||   |||| ||| |||||||  |||||||||||||||||||| ||||  ||     
T  26417832 aaacagagtagtgaagatagtggttgtacactttgtacaattgtcattttccaacgttctccaaagaatgagcatccaatgccttcaaattcttttgaat 26417733  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||| | ||| |||||||||    
T  26417732 tagccgttgcttcattcttctagtcttctg 26417703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 50300246 - 50300358
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||||||||||||||||  ||||||||| |||||||||   || ||||  |||||||||| ||||||||| |||||| |||  |||||||||||    
T  50300246 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacatacatccaatgcgttcaaatcccttcaaa-tagcagttgcttcact 50300344  T
Q  125 tttccagtcttctg 138  Q
    ||||||||||||||    
T  50300345 tttccagtcttctg 50300358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11868267 - 11868335
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  11868267 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctt 11868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 11909171 - 11909079
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||||||||| ||||||| |||||||||||| |   ||||||||| |||||||||  ||| | ||||||||||||||||||||||||||||||    
T  11909171 agtagtggaggtagtggtcgtacacttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 11909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21636831 - 21636742
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  21636831 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 46796528 - 46796436
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||| ||| ||||||||    
T  46796528 agagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcctt 46796436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 45858875 - 45858804
Alignment:
Q  36 acacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    ||||||||||||   ||||||||| |||||||||  ||| | ||||||||||||||||||||||||||||||    
T  45858875 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 45858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30054378 - 30054310
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||  ||||| ||| |||||||||    
T  30054378 agagacaaaaacagagtagtggagttagtggttgtacatttcgtacaaacgtactatgtcaacgctctt 30054310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1728176 - 1728129
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 48  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  1728176 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 1728129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49666566 - 49666519
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 48  Q
    ||||||| || | |||||||||||||||||||||||||||||||||||    
T  49666566 agagacagaatcagagtagtggagatagtggttgtacacttcgtacaa 49666519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 51341011 - 51341107
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||||        ||||| |||||||||  ||| | ||||||||||||||||||| |||||    
T  51341011 agacaaaaacagagtagtggaggtagtggtcgtacacttcgtac--------tttgtcaacgctctttgaaggataagcatccaatgccttcaattcctt 51341102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9700197 - 9700108
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  9700197 agagacaaaaacagagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgc 9700108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 37412605 - 37412650
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaa 48  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  37412605 agacagaaacagagtagtggagatagtggttgtacatttcgtacaa 37412650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 40850991 - 40851055
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||||||||||||||||||||||   |||| ||| |||||||||  ||||| |||||||||||||    
T  40850991 tagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgc 40851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 12752779 - 12752683
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| |||| |||||||||||||| ||||||||        |||||||||| |||||||||  ||| | ||| ||||||||||||||| |||||    
T  12752779 agacataaacagagttgtggagatagtggtcgtacactt--------tgtactttgtcaacgctctttgaaggataagtatccaatgccttcaattcctt 12752688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 49666480 - 49666438
Alignment:
Q  96 aatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||| |  |||||||||||||||||    
T  49666480 aatcctttcaaaatagtcgttgttatacttttccagtcttctg 49666438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 13557777 - 13557809
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacactt 41  Q
    |||| ||||||||||||||||||||||||||||    
T  13557777 aaacagagtagtggagatagtggttgtacactt 13557809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 6253430 - 6253508
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||| ||||| ||||||| ||||| || |||| ||||| ||||   |||| ||||||||||| ||||||||||||||||    
T  6253430 gagtaatggaggtagtggtagtacaatt-gtactattgtccttttccaacgttcttcaaagaataagcatccaatgcctt 6253508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 10529346 - 10529389
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    |||||||| | |||| |||||| |||||||||||||||||||||    
T  10529346 agacacaagcagagtcgtggaggtagtggttgtacacttcgtac 10529389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 2e-65; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25829127 - 25829264
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25829127 agagacacaaaatgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 25829226  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25829227 tttcaaaatagtcgttgcttcactcttccagtcttctg 25829264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30666982 - 30667119
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  30666982 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgccttcaaatcc 30667081  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||| | |||||||||||||    
T  30667082 tttcaaaatagtcgttgcttcattcttccagtcttctg 30667119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 13964085 - 13963949
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  13964085 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaattc 13963986  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||| || |||||||||    
T  13963985 tttcaaaatagtcgttgcttcactctttcagtcttct 13963949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 20568853 - 20568720
Alignment:
Q  5 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 104  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20568853 acacaaactgagtagtggggatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 20568754  T
Q  105 aaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| || ||||||||||| |||||||||||||    
T  20568753 aaaattgttgttgcttcactcttccagtcttctg 20568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 23235000 - 23235137
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |    
T  23235000 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattc 23235099  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  23235100 tttcaaaatagtcgttgctttactcttccagtcttctg 23235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 30621210 - 30621346
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  30621210 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30621309  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  30621310 ttcaaaatagtcgctgcttcactcttccagtcttctg 30621346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 30623831 - 30623967
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  30623831 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30623930  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  30623931 ttcaaaatagtcgctgcttcactcttccagtcttctg 30623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18377013 - 18376890
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18377013 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 18376914  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||| ||||||    
T  18376913 tttcaaaatagtagttgattcact 18376890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22188209 - 22188072
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  22188209 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgccttcaaatct 22188110  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     ||||||||||| ||||||||||| || ||||||||||    
T  22188109 attcaaaatagttgttgcttcactctttcagtcttctg 22188072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24377094 - 24377231
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||| ||    
T  24377094 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctctcaaaacc 24377193  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||  ||||||||    
T  24377194 tttcaaaatagtcgttgcttcactcttctggtcttctg 24377231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 21537353 - 21537218
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||| ||||    
T  21537353 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcctccaaaacctt 21537254  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||| |||  ||||||||    
T  21537253 tcaaaatagtcgttgcttcactcttctggtcttctg 21537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24576028 - 24576165
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||| || |||||||||| ||||||    
T  24576028 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaactctcttcaacgaacaaacaaccaatgcctttaaatcc 24576127  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||||||||||||||    
T  24576128 tttcaaaatagttgttgcttcacttttccagtcttctg 24576165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25037366 - 25037229
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  25037366 agagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcc 25037267  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||| | ||||| |||||||||||||    
T  25037266 tttcaaattagtcgttacatcactcttccagtcttctg 25037229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25041473 - 25041336
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  25041473 agagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcc 25041374  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||| | ||||| |||||||||||||    
T  25041373 tttcaaattagtcgttacatcactcttccagtcttctg 25041336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 10009857 - 10009734
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||    
T  10009857 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgctttcaaatcc 10009758  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  10009757 tttcaaaatagttgttgcttcact 10009734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40782470 - 40782593
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||    
T  40782470 agagacacaaactaagtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatcc 40782569  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  40782570 tttcaaaatagtcgttgcttcact 40782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9015475 - 9015340
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  9015475 agagatacaaactgagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaatcc 9015378  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||| |||||| |||||||||||||    
T  9015377 tttcaaaatagttgttgtttcactcttccagtcttctg 9015340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19540409 - 19540546
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||| ||    
T  19540409 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaataccttcaaaacc 19540508  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||| |||||||||||| | | |||||||||    
T  19540509 tttcgaaatagccgttgcttcactctcctagtcttctg 19540546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 6574223 - 6574093
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaatt-gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||  |||||||| |||||||||||||||||||||||||||    
T  6574223 aaacagagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 6574124  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
     ||||||||||||||||||||||||||||||    
T  6574123 ctagtcgttgcttcacttttccagtcttctg 6574093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 31800994 - 31800857
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||  |||| ||| |||||||||| |||||||||    
T  31800994 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaatcc 31800895  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  31800894 tttcaaaatagttgttgtttcacttttccagtcttctg 31800857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24779336 - 24779459
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||||||| ||||| |||| |||||||||    
T  24779336 agagacacaaactgagtagtggagatagtggttatacacttcatacaattgtactatgtcaacactcttcaaagaacaaacatccgatgctttcaaatcc 24779435  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  24779436 tttcaaaatagtcgttgcttcact 24779459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 28140726 - 28140603
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||    
T  28140726 agagacacaaactgagtagtggagatagtgatggtacactttgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgttttcaaatcc 28140627  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  28140626 tttcaaaatagttgttgcttcact 28140603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 38781405 - 38781528
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||| ||||||||||||||||||||||||||||     
T  38781405 gagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaatcattcaatgccttcaaatcctttcaaaatagtt 38781504  T
Q  114 gttgcttcacttttccagtcttct 137  Q
    ||||||||||||||||||||||||    
T  38781505 gttgcttcacttttccagtcttct 38781528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 20152117 - 20152005
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  20152117 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcactt 20152018  T
Q  126 ttccagtcttctg 138  Q
    |||||||||||||    
T  20152017 ttccagtcttctg 20152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24850773 - 24850650
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| |||||||||||||  ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  24850773 agagacacacactgagtagtggatgtagtggttgtacatttcgtacacttgtactttgtcaacgctcttcaaagaacaagcatccaatgctttgaaatcc 24850674  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||| |||||||||||||    
T  24850673 tttcaaaatattcgttgcttcact 24850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 28711805 - 28711668
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||| | |||||||||  ||||||||||||||||||||||||||| |    
T  28711805 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattc 28711706  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     ||| ||||||||||||||| |||||||||||||||||    
T  28711705 attcgaaatagtcgttgctttacttttccagtcttctg 28711668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 22317594 - 22317721
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc-aaa 107  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||| |||    
T  22317594 aaactgaatagtggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctttaaatcctttcaaaa 22317693  T
Q  108 atagtcgttgcttcacttttccagtctt 135  Q
    ||||||||||||||||| ||| ||||||    
T  22317694 atagtcgttgcttcactcttctagtctt 22317721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 6392634 - 6392764
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| |||||||||  ||||||||||||  ||||||||| |||||||||   || |||||||||||||||| ||||||||||||||||    
T  6392634 aaacagagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 6392733  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||||||||||    
T  6392734 atagtcgttgcttcacttttccagtcttctg 6392764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 39037749 - 39037624
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||| | |    
T  39037749 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatctaatgccttcaacttc 39037650  T
Q  101 tttcaaaatagtcgttgcttcacttt 126  Q
     ||  || ||| ||||||||||||||    
T  39037649 atttgaattagccgttgcttcacttt 39037624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 45087266 - 45087154
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 125  Q
    |||||||||||||||||||||||  ||||||||| |||||||||   |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  45087266 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcactt 45087167  T
Q  126 ttccagtcttctg 138  Q
    |||||||||||||    
T  45087166 ttccagtcttctg 45087154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 26619200 - 26619071
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||| |||||| |||||||||||||| ||||  |||    
T  26619200 aaacagagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctccaaagaataagcattcaatgccttcaaattcttttgaaa 26619101  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||| ||||||||| | |||||||||||||    
T  26619100 tagttgttgcttcattcttccagtcttctg 26619071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 41121826 - 41121689
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||| || |||||||||||| |||  |||||||||||||||||||    
T  41121826 agagacacaaacagagtagtggaggtagtggttgtacatttcgcacaattgtactttgtcaatgctcttcaaagagcaataatccaatgccttcaaatcc 41121727  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||  || ||||| ||||||||||  |||| |||||||    
T  41121726 ttttgaattagtctttgcttcactcatccaatcttctg 41121689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22455097 - 22455002
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaa 96  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||    
T  22455097 agagacacaaactgagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgccttcaa 22455002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 28701322 - 28701199
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| || ||||||||||||||||||||   |||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||   |    
T  28701322 agtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatcctttcaaaatatctg 28701223  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    |||||| |||||||||||||||||    
T  28701222 ttgctttacttttccagtcttctg 28701199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 23595674 - 23595539
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||||||||| |    
T  23595674 agagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacg--cttcagagaacaagaatccaatgccttcaaattc 23595577  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     ||  || |||||||||||||||| |||  ||||||||    
T  23595576 atttgaattagtcgttgcttcactcttctggtcttctg 23595539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35744107 - 35743978
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||  ||||| ||| |||||||||  |||||  ||||| ||||||||||||||||    
T  35744107 agagacaaaaactgagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatcc 35744008  T
Q  101 tttcaaaatagtcgttgcttcacttttcca 130  Q
    || ||||||||||||||||  |||||||||    
T  35744007 ttccaaaatagtcgttgctatacttttcca 35743978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 22260432 - 22260536
Alignment:
Q  34 gtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtc 133  Q
    ||||||||| |||||||||||| ||| || ||||||||||||||||||||||| | ||||||||||||| ||||||| | ||||||||||||||||||||    
T  22260432 gtacacttcttacaattgtactatgtcaaagctcttcaaagaacaagcatccagttccttcaaatccttccaaaatatttgttgcttcacttttccagtc 22260531  T
Q  134 ttctg 138  Q
    |||||    
T  22260532 ttctg 22260536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25189391 - 25189486
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaa 96  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||    
T  25189391 agagacacaaattgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaaaagcaagaatccaatgccttcaa 25189486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 22802461 - 22802590
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| ||| |||||  ||||| |||||||  ||||||||||||||||||||||    
T  22802461 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaa 22802560  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| | |||||| || |||| |||||||||    
T  22802561 tagccattgctttacctttctagtcttctg 22802590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 30557415 - 30557290
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagt 112  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||   || |||||||||||||||  ||||||| |||||||||||||    
T  30557415 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgtgttcaaattctttcaaaatagt 30557316  T
Q  113 cgttgcttcacttttccagtcttctg 138  Q
    || |||||||||||| ||||| ||||    
T  30557315 cgatgcttcactttttcagtcctctg 30557290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 31328065 - 31327936
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| ||||||||||||||||||| | |   |||||||| |||||||||  ||||||||||||||||||| |||||| || | |||||    
T  31328065 aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaa 31327966  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| || |||||||||    
T  31327965 tagtcgttgcttcacttctctagtcttctg 31327936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 31334786 - 31334657
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| ||||||||||||||||||| | |   |||||||| |||||||||  ||||||||||||||||||| |||||| || | |||||    
T  31334786 aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaa 31334687  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| || |||||||||    
T  31334686 tagtcgttgcttcacttctctagtcttctg 31334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 33074219 - 33074356
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||| ||| | ||| |||| | ||  ||||| ||||||| ||||||||| ||||     
T  33074219 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaatct 33074318  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     | ||||||||||||||||  |||||||||||||||||    
T  33074319 gtccaaaatagtcgttgctatacttttccagtcttctg 33074356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 34322030 - 34321906
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||| |||||||||||||||||||| |||||  ||||| ||| |||||||||  ||||| ||| ||||||||||||  ||||||||||||||||||    
T  34322030 gagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagtc 34321931  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||  |||||||||| ||||||    
T  34321930 gttgctatacttttccaggcttctg 34321906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28551025 - 28550933
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  28551025 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 28550933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44840427 - 44840519
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  44840427 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 44840519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23184411 - 23184317
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||  ||||| ||||| || |||||||||||||||||    
T  23184411 agagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacg--cttcagagaac-agaatccaatgccttcaaat 23184317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 22272139 - 22272263
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaa-gcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||||||||||||||||||||||| ||||||| | |||| | ||| |||| ||| ||| || ||||||||||||||||||||| ||  || |||||    
T  22272139 agtagtggagatagtggttgtacacttcttacaattttcctttttcaactctctccaacgaaaaaagcatccaatgccttcaaatccatttgaattagtc 22272238  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
     |||||||| | |||||||||||||    
T  22272239 attgcttcattcttccagtcttctg 22272263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22776395 - 22776303
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  22776395 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 22776303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22781773 - 22781681
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  22781773 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 22781681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31968150 - 31968061
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||  ||||| |||||||||||||    
T  31968150 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 31968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40332080 - 40332208
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||         ||    
T  40332080 agagacaaaaacagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatg---------cc 40332170  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||  |||||||||||||||||    
T  40332171 tttcaaaatagccgttgctatacttttccagtcttctg 40332208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 1587132 - 1587048
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  |||||  |||||||||||||||    
T  1587132 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctt 1587048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14581508 - 14581600
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| || | ||| |||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  14581508 agagacaaaatcagagaagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 14581600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 19115089 - 19115213
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||| |||| ||| ||| | ||||||| || ||||| |||| |   || ||||     
T  19115089 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacactctccaacgaataggcatccactggcttcacatccatctgaattagtt 19115188  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||| | |||||||||||||    
T  19115189 gttgcttcattcttccagtcttctg 19115213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 44881173 - 44881297
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||| |||| |||  || || ||||||||||||||||| || ||  || |||      
T  44881173 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaactctctccaacaaaaaaacatccaatgccttcaaacccatttgaattagct 44881272  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    | ||||||| | |||||||||||||    
T  44881273 gctgcttcattcttccagtcttctg 44881297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 3277037 - 3277116
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||||||||||||||||||||||||||||||  ||||| | | |||||||||  ||||| |||||||||||||||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttc 3277116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 22785749 - 22785670
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    |||||||||||||||||||| ||||||| ||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||    
T  22785749 gagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctt 22785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 18702744 - 18702872
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||||||||||| |||| | ||||||||||||||| ||||   |||| ||| ||||||  ||||||| ||||||||||||| ||||  || ||| |    
T  18702744 gagtagtggagatagttgttgcatacttcgtacaattgtccttttccaacgttctccaaagagtaagcatctaatgccttcaaattcttttgaattagcc 18702843  T
Q  114 gttgcttcacttttccagtcttctgtaat 142  Q
    ||| |||||   ||| |||||||||||||    
T  18702844 gttacttcatgcttctagtcttctgtaat 18702872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22258194 - 22258231
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtaca 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22258194 agagacacaaactgagtagtggagatagtggttgtaca 22258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 18431034 - 18430926
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| | ||||||||||||||||||| |||||  |||   |||| | | ||||||| |||||| |||||||||||||| ||||  || ||| |    
T  18431034 gagtagtggaggtcgtggttgtacacttcgtactattgtcgttttccaacgttttccaaagaataagcattcaatgccttcaaattcttttgaattagcc 18430935  T
Q  114 gttgcttca 122  Q
    |||||||||    
T  18430934 gttgcttca 18430926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 10896525 - 10896422
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||||||||||||||||| || |||| ||||| ||||   ||||||||||   ||| ||||||||||||||||| ||| |||   |||||| ||    
T  10896525 agtagtggagatagtggttgtacaatt-gtactattgtccttttctaacgctcttcggcgaataagcatccaatgccttctaattcttctgaaatagccg 10896427  T
Q  115 ttgct 119  Q
    |||||    
T  10896426 ttgct 10896422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 1084009 - 1084105
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| ||||||| ||||||||        |||||||||| |||||||||  ||| | ||||||| ||||||||||| |||||    
T  1084009 agacaaaaacagagtagtggaggtagtggtcgtacactt--------tgtactttgtcaacgctctttgaaggataagcatctaatgccttcaattcctt 1084100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 7609039 - 7609077
Alignment:
Q  86 aatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  7609039 aatgccttcaaatcctttcaaaataggtgttgcttcact 7609077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 19498048 - 19498010
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacactt 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  19498048 agacacaaacagagtagtggaggtagtggttgtacactt 19498010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24814677 - 24814645
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||||||||| |||||||||||||||||||||    
T  24814677 gagtagtggaggtagtggttgtacacttcgtac 24814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 23392750 - 23392707
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    |||||||||||||||||||||| |||||||  || |||||||||    
T  23392750 tagtggttgtacacttcgtacagttgtactaggtcaacgctctt 23392707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 122; Significance: 6e-63; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18733 - 18596
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18733 agagacacaaactgagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgccttcaaatcc 18634  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18633 tttcaaaatagtcgttgcttcactcttccagtcttctg 18596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 6e-63; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12757923 - 12757786
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12757923 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 12757824  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  12757823 tttcaaaatagttgttgcttcactctttcagtcttctg 12757786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39693526 - 39693663
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  39693526 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 39693625  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  39693626 tttcaaaatagtcattgcttcactcttccagtcttctg 39693663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 602880 - 602743
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  602880 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 602781  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||| |||||||||| ||| |||||||||    
T  602780 tttcaaaatagtcattgcttcactcttcaagtcttctg 602743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19156187 - 19156324
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19156187 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 19156286  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||||||||||| ||| |||||||||    
T  19156287 tttcaaattagtcgttgcttcactcttctagtcttctg 19156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16188975 - 16189112
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||     
T  16188975 agagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgccttcaaatca 16189074  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16189075 tttcaaaatagtcgttgcttcactcttccagtcttctg 16189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17525889 - 17525752
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  17525889 agagacacaaactgagtagtgaagatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 17525790  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||| |||||| |||||||||||||    
T  17525789 tttcaaaatagttgttgtttcactcttccagtcttctg 17525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16207297 - 16207434
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  16207297 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 16207396  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||| ||| |||||||||||||    
T  16207397 tttcaaaatagtagttgctttactcttccagtcttctg 16207434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16681463 - 16681326
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  16681463 agagacacaaactgagtactagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcc 16681364  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||| |||||||||||| |||||||||||||    
T  16681363 tttcaaactagacgttgcttcactcttccagtcttctg 16681326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17914450 - 17914587
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17914450 agagaaacaaattgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcc 17914549  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  17914550 tttcaaaatagttgttgcttcactcttacagtcttctg 17914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 29693306 - 29693443
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||    
T  29693306 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaaagctcttcaaagaacaagcatacaatgctttcaaatcc 29693405  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  29693406 tttcaaaatagtggttgcttcactctttcagtcttctg 29693443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 18718992 - 18719115
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||    
T  18718992 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgctttcaaatcc 18719091  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    | ||||||||||||||||||||||    
T  18719092 tatcaaaatagtcgttgcttcact 18719115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17441967 - 17441831
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  17441967 agagacacaaaatgagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatg-cttcaaatcc 17441869  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||| | | |||||||||||||    
T  17441868 tttcaaaatagtcgttgctttagtcttccagtcttctg 17441831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17797413 - 17797554
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||    
T  17797413 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcc 17797512  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    ||||||| ||| |||||| |||||||||||||||||||||||    
T  17797513 tttcaaactagccgttgcatcacttttccagtcttctgtaat 17797554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 23185386 - 23185249
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  23185386 agagacaaaaacagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 23185287  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  23185286 tttcaaactagtcgttgcttcacttttccagtcttctg 23185249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18679806 - 18679925
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  18679806 agagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 18679905  T
Q  101 tttcaaaatagtcgttgctt 120  Q
    | ||||||||||||||||||    
T  18679906 tatcaaaatagtcgttgctt 18679925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18321319 - 18321196
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  18321319 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccctcaaatcc 18321220  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||| |||||||  |||||||||||    
T  18321219 tttgaaaatagctgttgcttcact 18321196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24646329 - 24646452
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||    
T  24646329 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcctgcaaatcc 24646428  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||  |||||| ||||    
T  24646429 tttcaaaatagctgttgctacact 24646452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 33082873 - 33082971
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33082873 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 33082971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24551265 - 24551402
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||||||||||||||||||||||||||     
T  24551265 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatct 24551364  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24551365 tttcaaaatagtcgttgcttcacttttccagtcttctg 24551402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 19943234 - 19943364
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||| || |||| |||||||||||||||||||||||||||||||||    
T  19943234 aaacagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaa 19943333  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| ||||||||||| |||||||||||||    
T  19943334 atagttgttgcttcactcttccagtcttctg 19943364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 40845547 - 40845410
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||  ||||| ||||||||||||||||| |||||    
T  40845547 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatcc 40845448  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  |||||||||||||||||    
T  40845447 ttccaaaatagtcgttgctatacttttccagtcttctg 40845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45538599 - 45538462
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||  ||||| |||||||||  |||||||||||||||||| ||||||||||    
T  45538599 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcc 45538500  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||||||||||||||    
T  45538499 tttcaaaatagttgttgcttcacttttccagtcttctg 45538462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30421589 - 30421451
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttc--aaagaacaagcatccaatgccttcaaat 98  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||   ||||||||||||||||||||||||||||    
T  30421589 agagacaaaaacagagtagtggaggtagtggttgtaaacttcgtacaat-gtactttgtcaacgctctttgaaaagaacaagcatccaatgccttcaaat 30421491  T
Q  99 cctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||| ||||||||||||||||||||||||||||||    
T  30421490 ccattcaaactagtcgttgcttcacttttccagtcttctg 30421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 15336246 - 15336111
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  | ||| |||||||||||||||||||||||||    
T  15336246 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15336147  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||  ||||||||||    
T  15336146 tcaaaatagtcgttgcttcactttctcagtcttctg 15336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 15425311 - 15425176
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  | ||| |||||||||||||||||||||||||    
T  15425311 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15425212  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||  ||||||||||    
T  15425211 tcaaaatagtcgttgcttcactttctcagtcttctg 15425176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 15516615 - 15516480
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  | ||| |||||||||||||||||||||||||    
T  15516615 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15516516  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||  ||||||||||    
T  15516515 tcaaaatagtcgttgcttcactttctcagtcttctg 15516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17267465 - 17267588
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||| ||||| |||||||||    
T  17267465 agagacaaaaactgagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaatgctcttcaaagaacaagcatctaatgctttcaaatcc 17267564  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||  |||||||||||    
T  17267565 tttcaaaatagctgttgcttcact 17267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 20382554 - 20382431
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| | | |||||||||    
T  20382554 agagacacaaactgattagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccactactttcaaatcc 20382455  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||| ||||| ||||||||||||    
T  20382454 tttcagaatagccgttgcttcact 20382431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1237628 - 1237765
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||  ||| ||||||||||| |||||||||||||||||| ||||  ||||||||| |||||||||  ||||||||  |||||||||||||||||||    
T  1237628 agagacaacaacagagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctttgaagaacaaatatccaatgccttcaaatcc 1237727  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1237728 tttcaaaatagtcgttgcttcacttttccggtcttctg 1237765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 18722798 - 18722670
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||| ||||||||||||| |||||||||    
T  18722798 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18722699  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||| |||  |||||||    
T  18722698 tagtcgttgcttcactcttcttgtcttct 18722670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 18731143 - 18731015
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||| ||||||||||||| |||||||||    
T  18731143 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18731044  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||| |||  |||||||    
T  18731043 tagtcgttgcttcactcttcttgtcttct 18731015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17701736 - 17701859
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||  ||||||||| || |||  ||||||||||||||||||||||    
T  17701736 agagacacaaactgagtagtggaggtagtggttgtaaacttcgtacaattatactttgccaacgctcttaaaggaattagcatccaatgccttcaaatcc 17701835  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  17701836 tttcaaaatagttgttgcttcact 17701859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 23263757 - 23263635
Alignment:
Q  16 gtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgt 115  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||| |    
T  23263757 gtagtggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtcat 23263658  T
Q  116 tgcttcacttttccagtcttctg 138  Q
    || |||||| ||| |||||||||    
T  23263657 tgtttcactcttctagtcttctg 23263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43644887 - 43644984
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  43644887 agagacacaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgccttcaaat 43644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 18685549 - 18685421
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||| ||||||||||||| |||||||||    
T  18685549 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18685450  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    |||| ||||||||||| |||  |||||||    
T  18685449 tagttgttgcttcactcttctggtcttct 18685421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 9320567 - 9320697
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttca-aagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| ||||||||||||||||||||||| | |||||||| |||||||||   ||||| ||||||||||||| ||||||||||||||||    
T  9320567 aaacagagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaa 9320666  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    ||| | |||||||||||||||||||||||||    
T  9320667 ataattgttgcttcacttttccagtcttctg 9320697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21932874 - 21933008
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||  || ||||||||| ||||||||| ||||||    
T  21932874 agagacaaacactgagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgcctttaaatcc 21932973  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    ||||||||||| ||||| |||||| || |||||||    
T  21932974 tttcaaaatagccgttgtttcactctttcagtctt 21933008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 20255660 - 20255584
Alignment:
Q  66 tcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20255660 tcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaat 20255584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19707497 - 19707634
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||| |    
T  19707497 agagacacaaactgagtagaggatgtagtggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaaccattcaatgccttcaaattc 19707596  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
     ||  || ||| |||||||||||| |||  ||||||||    
T  19707597 atttgaattagccgttgcttcactcttctggtcttctg 19707634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18121266 - 18121132
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||| ||| |||||||   |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||| ||||||    
T  18121266 agagacagaaacagagtagttgaggtagtggt---acacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgcctttaaatcc 18121170  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||  ||||||||||| ||| |||||||||    
T  18121169 tttcaaaatagcagttgcttcactcttctagtcttctg 18121132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22673769 - 22673906
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||||||| |||| |||||    
T  22673769 agagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatcc 22673868  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||  ||||||  ||||||| |||||||||    
T  22673869 ttccaaaatagatgttgctatacttttctagtcttctg 22673906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22663107 - 22663244
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  |||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||||||| |||| ||||     
T  22663107 agagacaaaaatagagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatct 22663206  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||| ||||||  | |||||||||||||||    
T  22663207 ttccaaaatagttgttgctatatttttccagtcttctg 22663244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 22461783 - 22461661
Alignment:
Q  16 gtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgt 115  Q
    |||||||||||||||||||| |||| ||||||||||| |||| | ||| |||| ||| ||| ||||||||||||||||||||||| ||  || |||||||    
T  22461783 gtagtggagatagtggttgtgcactccgtacaattgtcctttttcaactctctccaacgaataagcatccaatgccttcaaatccatttgaattagtcgt 22461684  T
Q  116 tgcttcacttttccagtcttctg 138  Q
    ||||||| | ||| |||||||||    
T  22461683 tgcttcattcttctagtcttctg 22461661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 36105186 - 36105323
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||||||| |||||||||||||||| ||||||  ||||| | | |||||||||  ||||| || ||||||||||||||||||||    
T  36105186 agagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatcc 36105285  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| ||||| |  ||||||||| |||||||    
T  36105286 ttccaaaatagccgttgttatacttttccaatcttctg 36105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 19956482 - 19956378
Alignment:
Q  20 tggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgct 119  Q
    ||||| ||||||||||||| || |||||||||| |||| | |||||||||||| ||| ||| ||||||||||||||||||||||  || |||||||||||    
T  19956482 tggaggtagtggttgtacaattagtacaattgtcctttttcaacgctcttcaatgaaaaagtatccaatgccttcaaatcctttagaattagtcgttgct 19956383  T
Q  120 tcact 124  Q
    |||||    
T  19956382 tcact 19956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14989611 - 14989518
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| |||||||||  ||||| |||||||||||||||||    
T  14989611 agagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttc 14989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25164061 - 25164134
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||    
T  25164061 agagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacactcttcaaag 25164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 45568059 - 45567943
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| |||||||| || ||||||| ||||||||||||||   ||||||||| |||||||||  ||| | || ||||||||||||||||||||||    
T  45568059 agacataaacagagtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctttgaaggataatcatccaatgccttcaaatcctt 45567960  T
Q  103 tcaaaatagtcgttgct 119  Q
    ||||| ||| |||||||    
T  45567959 tcaaattagccgttgct 45567943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6407717 - 6407810
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||| ||| |||||||||  |||||  ||||||||||||||||    
T  6407717 agagacaaaaacagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttc 6407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18151806 - 18151713
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| || ||||||  ||||| |||||||||||||||||    
T  18151806 agagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttc 18151713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 24833204 - 24833080
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaaatagt 112  Q
    ||||| ||||| |||||||||||||||||||||||  ||||  ||| |||||||||   || |||||||||||||||| ||||||||| |||||| |||     
T  24833204 gagtaatggaggtagtggttgtacacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcccttcaaagtagc 24833105  T
Q  113 cgttgcttcacttttccagtcttctg 138  Q
    | ||||||||||||| ||||||||||    
T  24833104 cattgcttcactttt-cagtcttctg 24833080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 13430785 - 13430699
Alignment:
Q  4 gacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| ||| |||||  ||||| |||||||||||||    
T  13430785 gacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 13430699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 18772624 - 18772707
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    ||||||||||| || |||||||||| || |||| ||||| ||||   |||| ||| ||||||| |||||||||||||||||||||    
T  18772624 gagtagtggaggtaatggttgtacattt-gtactattgtccttttccaacgttctccaaagaataagcatccaatgccttcaaat 18772707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 43639782 - 43639866
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    |||| ||||||||||||||||||||||||||||||| |||  |||   ||| |||||||||  || || |||||| |||||||||    
T  43639782 aaacagagtagtggagatagtggttgtacacttcgtgcaaacgtaacatgtcaacgctctttgaaaaataagcattcaatgcctt 43639866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 7018454 - 7018416
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacactt 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  7018454 agacacaaacagagtagtggaggtagtggttgtacactt 7018416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 20259690 - 20259652
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacactt 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  20259690 agacacaaacagagtagtggaggtagtggttgtacactt 20259652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 21046320 - 21046282
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacactt 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  21046320 agacacaaacagagtagtggaggtagtggttgtacactt 21046282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21301026 - 21301102
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||||||  |||||||||||||||| ||||||  ||||| ||| |||||||||  | ||  |||||||||||||    
T  21301026 gagtagtggaagtagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaggagtaagcatccaatgc 21301102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 21540985 - 21541041
Alignment:
Q  51 gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    ||||||||| |||||||||  ||| | ||||||||||||||||| | ||||||||||    
T  21540985 gtactttgtcaacgctctttgaaggataagcatccaatgccttctattcctttcaaa 21541041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 33560359 - 33560295
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||||||||||||||||||||||  ||| | ||| |||||||||  |||||  ||||||||||||    
T  33560359 tagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaattagcatccaatgc 33560295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 6e-63; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37985730 - 37985593
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  37985730 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 37985631  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  37985630 tttcaaaatagttgttgcttcactttttcagtcttctg 37985593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9140905 - 9141041
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  9140905 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 9141004  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9141005 tttcaaaatagtcgttgctttacttttccagtcttct 9141041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3395583 - 3395720
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  3395583 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaactagcatccaatgctttcaaatcc 3395682  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  3395683 tttcaaaatagtcgttgcttcactttttcagttttctg 3395720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19666365 - 19666502
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||||||    
T  19666365 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaactctcttcaaagaacaagtattcaatgctttcaaatcc 19666464  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19666465 tttcaaaatagtcgttgcttcactcttccagtcttctg 19666502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 29680662 - 29680525
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  29680662 agagacacatactgagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 29680563  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29680562 tttcaaaatagtcgttgcttcactcttccagtcttctg 29680525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 12601099 - 12601231
Alignment:
Q  6 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12601099 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 12601198  T
Q  106 aaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||| ||| |||||||||    
T  12601199 aaatagtcgttgattcactattcaagtcttctg 12601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19884695 - 19884832
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  19884695 agagacaaaaacagattagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 19884794  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  19884795 tttcaaactagtcgttgcttcacttttccagtcttctg 19884832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 55380283 - 55380420
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  55380283 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 55380382  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||  ||||||||    
T  55380383 tttcaaaatagttgttgcttcactcttctggtcttctg 55380420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16632433 - 16632570
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||     
T  16632433 agagacacaaactgattggtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgccttcaaatct 16632532  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  16632533 tttcaaaatagtcgttgattcactcttccagtcttctg 16632570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19621179 - 19621055
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||||    
T  19621179 agagacacaaactgaatagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcatagaacaagcatccaatgctttcaaatcc 19621080  T
Q  101 tttcaaaatagtcgttgcttcactt 125  Q
    |||||||||||||||||||||||||    
T  19621079 tttcaaaatagtcgttgcttcactt 19621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12811293 - 12811159
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||   ||||||||||||||||||||||||||||    
T  12811293 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctatt---agaacaagcatccaatgccttcaaatcc 12811197  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| || ||||||||||    
T  12811196 tttcaaaatagtcgttgcttcactctttcagtcttctg 12811159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10692844 - 10692981
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| |||||  |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10692844 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 10692943  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||||||||||||||    
T  10692944 tttcaaaatagttgttgcttcacttttccagtcttctg 10692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10906610 - 10906747
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| |||||  |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10906610 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 10906709  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||||||||||||||||    
T  10906710 tttcaaaatagttgttgcttcacttttccagtcttctg 10906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 29121363 - 29121500
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  29121363 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgccttcaaatcc 29121462  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  29121463 tttcaaaatagtcgttgcttcactttttcagtcttctg 29121500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14904474 - 14904337
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||    
T  14904474 agagacacaaactgagtggtggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaatcc 14904375  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  14904374 tttcaaaatggacgttgcttcacttttccagtcttctg 14904337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 22675630 - 22675501
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||     
T  22675630 aaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttcaaatcctttcaaac 22675531  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||| |||||||||    
T  22675530 tagtcgttgcttcacttttctagtcttctg 22675501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37435653 - 37435516
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||  |||||||||||||||||||||||||||||    
T  37435653 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 37435554  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  37435553 tttcaaaatagtcgttgcttcactcttccaatcttctg 37435516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 14605023 - 14604887
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc-t 101  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |    
T  14605023 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctt 14604924  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| ||||||||||| ||| |||||||||    
T  14604923 ttaaaaatagttgttgcttcactcttctagtcttctg 14604887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10072928 - 10073065
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  || ||||||| ||||||||||||||||||    
T  10072928 agagacaaaaacatagtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgccttcaaatcc 10073027  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||  |||||||||||||||||||||||||    
T  10073028 tttcaaactagcagttgcttcacttttccagtcttctg 10073065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 45833395 - 45833524
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  45833395 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgcattcaaatactttcaaaa 45833494  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||  ||||||| ||| |||||||||||||    
T  45833495 tagaagttgcttaactcttccagtcttctg 45833524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 54679931 - 54680060
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||||||  |||||||| ||||||||||||||||||||||||||||    
T  54679931 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaa 54680030  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||||||||||||||||||||    
T  54680031 tagttgttgcttcacttttccagtcttctg 54680060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 3483739 - 3483851
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 125  Q
    |||||||||| | ||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3483739 tagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 3483838  T
Q  126 ttccagtcttctg 138  Q
    |||||||||||||    
T  3483839 ttccagtcttctg 3483851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19911999 - 19911875
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt-caaagaacaagcatccaatgccttcaaatc 99  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||| ||||||| ||||||||||||| ||||||||    
T  19911999 agaggcacaaactgagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgctttcaaatc 19911900  T
Q  100 ctttcaaaatagtcgttgcttcact 124  Q
    |||||||||||||||||||||||||    
T  19911899 ctttcaaaatagtcgttgcttcact 19911875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 40846092 - 40846217
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||| | |    
T  40846092 agagatacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgctttcaacttc 40846191  T
Q  101 tttcaaaatagtcgttgcttcacttt 126  Q
     ||  || ||||||||||||||||||    
T  40846192 atttgaattagtcgttgcttcacttt 40846217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 56034567 - 56034704
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||| | ||||||||||||||||| |||||||| ||   ||||||||||||||| |||||||||  |||||||| ||||||||||||||||||      
T  56034567 agagacacatattgagtagtggagatagtagttgtacattttagacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatta 56034666  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  56034667 tttcaaaatagtcgttgcttcactcttccagtcttctg 56034704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 413008 - 413132
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||  |||||||| ||| ||||||||||||||||||||||| ||| |    
T  413008 gagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagcc 413107  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||| |||||||||    
T  413108 gttgcttcacttttcgagtcttctg 413132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6641677 - 6641800
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  6641677 agagacataaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagtatcaaatgccttcaaatcc 6641776  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||  || ||| ||||| ||||||    
T  6641777 ttttgaattagccgttgtttcact 6641800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13576232 - 13576095
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||||||  |||||||| ||||||||||||| ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||    
T  13576232 agagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcc 13576133  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||| |||||||||||| |||||||||||||    
T  13576132 tttcaaactaggcgttgcttcactcttccagtcttctg 13576095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 8105638 - 8105768
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| ||||||||||||| |||||||||  ||||||||| |||||||||   || |||||||||||||||| ||||||||||||||||    
T  8105638 aaacagagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 8105737  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||||| |||||||||||||||    
T  8105738 atagccgttgcttcaattttccagtcttctg 8105768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6517478 - 6517615
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||  |||| ||| |||||    
T  6517478 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatcc 6517577  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  |||||||||||||||||    
T  6517578 ttccaaaatagtcgttgctatacttttccagtcttctg 6517615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 17247245 - 17247362
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||| || | ||||  |||||||| ||| |||||||||||||||||||||||     
T  17247245 aaacagagtagtggaggcagtggttgtacacttcgtacaattgtactttgtcaatgttctttgaagaacaaacattcaatgccttcaaatcctttcaaat 17247344  T
Q  109 tagtcgttgcttcacttt 126  Q
    ||||||||||||||||||    
T  17247345 tagtcgttgcttcacttt 17247362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 14833448 - 14833526
Alignment:
Q  60 aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14833448 aaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctg 14833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 25651214 - 25651085
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||| ||||||  |||||  || |||||||||  ||||| |||||| |||||||||||||||||| |||||    
T  25651214 aaacagagtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgccttcaaatccttccaaaa 25651115  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||||||| |||||||||    
T  25651114 tagccgttgcttcacttttcaagtcttctg 25651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 16940026 - 16940146
Alignment:
Q  18 agtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttg 117  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||||||| |  ||||| |||||| |||||||||  ||||||||||||||||||||||    
T  16940026 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttg 16940125  T
Q  118 cttcacttttccagtcttctg 138  Q
    ||  |||||||||||||||||    
T  16940126 ctatacttttccagtcttctg 16940146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 11915701 - 11915830
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||   |||||||||||||| |||||||||| ||||   |||||||||||||||| ||||||||||||||||||||||| ||  |||    
T  11915701 aaacagagtagtggaggcggtggttgtacactttgtacaattgtccttttccaacgctcttcaaagaataagcatccaatgccttcaaatccatttgaaa 11915800  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||| ||  |||||||||    
T  11915801 tagtcgttgcttcactcttttagtcttctg 11915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 56533172 - 56533042
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||  |||||||||||||||||||||||  ||||||||| |||||||||   || ||||| |||| ||||| ||||||||||||||||    
T  56533172 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaaacatctaatgcattcaaatcctttcaaa 56533073  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||||| |||| ||||||||||    
T  56533072 atagccgttgcttcattttttcagtcttctg 56533042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 16853496 - 16853602
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| ||||  |||||||||| |||||||||  | ||||||||||||||||| |||||||||    
T  16853496 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgctttcaaatcc 16853595  T
Q  101 tttcaaa 107  Q
     ||||||    
T  16853596 cttcaaa 16853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3105537 - 3105400
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||   |||| ||| |||||||||  ||||| || |||||||| | ||  |||||    
T  3105537 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcc 3105438  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||    |||||||||||||||||    
T  3105437 tttcaaaatagccgttggaatacttttccagtcttctg 3105400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17398792 - 17398664
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||         ||    
T  17398792 agagacaaaaacagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatg---------cc 17398702  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||  |||||||||||||||||    
T  17398701 tttcaaaatagtcgttgctatacttttccagtcttctg 17398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23750515 - 23750605
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttca-aagaacaagcatccaatgcctt 93  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||| ||||| || |||||||||| ||||||||    
T  23750515 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttg---acgcacttcataaaaacaagcatcaaatgcctt 23750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 11901196 - 11901317
Alignment:
Q  17 tagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgtt 116  Q
    ||||| |||||||| ||||||||||||||||||||| ||||   |||| ||| || |||| ||||||||||||||||||||  ||||  || ||||||||    
T  11901196 tagtgtagatagtgattgtacacttcgtacaattgtccttttctaacgttctccagagaataagcatccaatgccttcaaaatcttttgaattagtcgtt 11901295  T
Q  117 gcttcacttttccagtcttctg 138  Q
    ||||||  |||| |||||||||    
T  11901296 gcttcatgtttctagtcttctg 11901317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 17788152 - 17788044
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgt-aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagt 112  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |  |||| ||| ||||||| ||||||| |||||||| |||| | ||  |||||||    
T  17788152 gagtagtggagatagtggttgtacacatcgtacaattgtcctttttccaacgttctccaaagaataagcatctaatgcctttaaattcctttgaaatagt 17788053  T
Q  113 cgttgcttc 121  Q
    | |||||||    
T  17788052 cattgcttc 17788044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22190839 - 22190928
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| |||||||||  |||||  ||||||||||||    
T  22190839 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgc 22190928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 41114875 - 41114754
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||| ||||| |||||||||||||||  ||||||||||| |||| | ||| |||| |||  || ||||||||||||||||||||| | ||  |||||| |    
T  41114875 gagtggtggaaatagtggttgtacacgacgtacaattgtcctttttcaactctctccaacaaaaaagcatccaatgccttcaaattcatttgaaatagcc 41114776  T
Q  114 gttgcttcacttttccagtctt 135  Q
    ||||||||| | ||| ||||||    
T  41114775 gttgcttcattcttctagtctt 41114754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 8685548 - 8685509
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgta 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8685548 gagtagtggagatagtggttgtacacttcgtacaattgta 8685509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 17540396 - 17540487
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||| | ||| |||| ||| ||| | ||||||| || ||||| ||||    
T  17540396 aaacagagtagtggagataatggttgtacacttcgtacaattgtcctttttcaacactctccaacgaataggcatccactggcttcacatcc 17540487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20977450 - 20977539
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  20977450 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgc 20977539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38513871 - 38513960
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||| |  |||||||||||||||||||||||| ||||| ||| |||||||||  |||||  | ||||||||||    
T  38513871 agagacaaaaacagagtagtgaaagtagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgc 38513960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40860660 - 40860749
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||| || |||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  40860660 agagacaaaaacagagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 40860749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 55731844 - 55731906
Alignment:
Q  72 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| || || | |||||||||    
T  55731844 aagaataagcatccaat-ccttcaaatcctttcaaaatagtcgttgatttacctctccagtctt 55731906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9751658 - 9751569
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||| |||   |||| ||| |||||||||  |||||  ||||||||||||    
T  9751658 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgc 9751569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 14154112 - 14154015
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaa-ttgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaa 97  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||||||| ||||||  | | |||| ||||  ||| | ||||||||||||| ||||||    
T  14154112 agagacaaaaacagagtagtggagaaggtggttgtacacttcgtacaagttgtacaatatcaacgttctttgaagtataagcatccaatgctttcaaa 14154015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 1672395 - 1672499
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||||| |||| ||||  ||| | || || |||| || || || |||||||||| ||| |    
T  1672395 gagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaaggataaacacccaaagcttttaagtcctttcaaattagcc 1672494  T
Q  114 gttgc 118  Q
    |||||    
T  1672495 gttgc 1672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 1674870 - 1674974
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||||| |||| ||||  ||| | || || |||| || || || |||||||||| ||| |    
T  1674870 gagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaaggataaacacccaaagcttttaagtcctttcaaattagcc 1674969  T
Q  114 gttgc 118  Q
    |||||    
T  1674970 gttgc 1674974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 3499745 - 3499682
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatg 89  Q
    ||||||||||||||||||||||| |||||| ||| ||||||| |  |||||  |||||||||||    
T  3499745 tagtggttgtacacttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatg 3499682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27188748 - 27188667
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| |||||||| ||||||||||| ||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  27188748 aaacagagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgc 27188667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 33378406 - 33378488
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||| |||| ||||||||||| |||||||||||||||        ||||||||||| ||| |||||  ||| ||||||||||||||||||    
T  33378406 agacaaaaacagagtagtggaggtagtggttgtacact--------ttgtactttgtcaactctctttgaaggacaagcatccaatgcctt 33378488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39419852 - 39419787
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgct 66  Q
    ||||||| |||| ||||| ||||  |||||||||||||||||||||||  ||||| ||| ||||||    
T  39419852 agagacaaaaacagagtaatggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgct 39419787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 10661277 - 10661190
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaa 97  Q
    |||| ||||||||||||||||||||||||| || |||| ||||| ||||   |||  ||| |||| || |||||| |||||||||||||    
T  10661277 aaacagagtagtggagatagtggttgtacaatt-gtactattgtccttttccaacattctccaaataataagcattcaatgccttcaaa 10661190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 10875422 - 10875335
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaa 97  Q
    |||| ||||||||||||||||||||||||| || |||| ||||| ||||   |||  ||| |||| || |||||| |||||||||||||    
T  10875422 aaacagagtagtggagatagtggttgtacaatt-gtactattgtccttttccaacattctccaaataataagcattcaatgccttcaaa 10875335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 15139283 - 15139343
Alignment:
Q  64 gctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||| | |||||||||||||||||||| | | ||  || ||||||||||||||||    
T  15139283 gctcttcaaaaagcaagcatccaatgccttcaacttcatttgaattagtcgttgcttcact 15139343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 6e-63; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33256433 - 33256296
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  33256433 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatcc 33256334  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||||||||||| |||||||||||||    
T  33256333 ttttaaaatagtcgttgcttcactcttccagtcttctg 33256296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33276605 - 33276468
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  33276605 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatcc 33276506  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||||||||||| |||||||||||||    
T  33276505 ttttaaaatagtcgttgcttcactcttccagtcttctg 33276468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22201818 - 22201681
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22201818 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaatcc 22201719  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||| |||||| ||||||||||    
T  22201718 tttcaaaatagttgttgctttactttttcagtcttctg 22201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 28492486 - 28492349
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28492486 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgccttcaaatcc 28492387  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| ||| |||||||||    
T  28492386 tttcaaaatagttgttgcttcactcttctagtcttctg 28492349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1577865 - 1578002
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||| ||||||| |    
T  1577865 agagacacaaactgagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgctttcaaattc 1577964  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1577965 tttcaaaatagtcgttgcttcactcttccagtcttctg 1578002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 32786018 - 32785882
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  32786018 gagacaaaaacatagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgccttcaaatcct 32785919  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32785918 ttcaaactagtcgttgcttcacttttccagtcttctg 32785882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19717522 - 19717659
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19717522 agagacacaaactgatttgtggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgccttcaaatcc 19717621  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  19717622 tttcaaaatagtcgttgcttcactcttccagtcctctg 19717659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22600264 - 22600127
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  22600264 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 22600165  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| || ||| |||||||||||||    
T  22600164 tttcaaaatagtcgttgttttactcttccagtcttctg 22600127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 35401821 - 35401946
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 35401920  T
Q  115 ttgcttcacttttccagtcttctgta 140  Q
    ||||||||||||||||||||||||||    
T  35401921 ttgcttcacttttccagtcttctgta 35401946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12284421 - 12284544
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  12284421 agagacacaaactgattagtggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 12284520  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||||||||||||||||    
T  12284521 tttcaaaatagtcgttgcttcact 12284544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22427439 - 22427302
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||    
T  22427439 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaatcc 22427340  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22427339 tttcaaactagtcgttgcttcacttttccagtcttctg 22427302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10757419 - 10757542
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||    
T  10757419 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaatcatccaatgctttcaaatcc 10757518  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    |||||||||||| |||||||||||    
T  10757519 tttcaaaatagttgttgcttcact 10757542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22153855 - 22153992
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  22153855 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatccaatgctttcaaatcc 22153954  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||| ||||||||||| ||| |||||||||    
T  22153955 tttcaaattagttgttgcttcactattctagtcttctg 22153992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25448648 - 25448511
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  25448648 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 25448549  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25448548 tttcaaaatagtcgctgcttcacttttccagtcttctg 25448511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 36134188 - 36134324
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||||    
T  36134188 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatg-cttcaaatcc 36134286  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  36134287 tttcaaaatagttgttgctccacttttccagtcttctg 36134324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 48704202 - 48704339
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  48704202 agagacataaattgagtagtggagacattggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaagcatccagtgccttcaaatcc 48704301  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||| |||||| |||||||||||||    
T  48704302 tttcaaaatagttgttgtttcactcttccagtcttctg 48704339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1900343 - 1900480
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||||||| |||||||||  |||||||||||| ||||||||| ||||||    
T  1900343 agagacaaaaacagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcc 1900442  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1900443 tttcaaaatagtcgttgcttcactcttccagtcttctg 1900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16235378 - 16235241
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||   ||||||||||| ||||||||||||||||    
T  16235378 agagacaaaaaaggagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctttggagaacaagcattcaatgccttcaaatcc 16235279  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16235278 tttcaaaatagtcgttgcttcacttttccagtcttctg 16235241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 20954555 - 20954418
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||||    
T  20954555 agagaaacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgctttcaaatcc 20954456  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||| | | |||||||||| |||| ||||||||    
T  20954455 tttcaaaatggccattgcttcactcttcctgtcttctg 20954418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22464891 - 22464754
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||     
T  22464891 agagacaaaaatagagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatca 22464792  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22464791 tttcaaattagtcgttgcttcacttttccagtcttctg 22464754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29215795 - 29215929
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||    
T  29215795 agagacaaaaacagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgccttcaaatcc 29215894  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    ||||||| ||| |||||||||||||||| ||||||    
T  29215895 tttcaaactagccgttgcttcacttttctagtctt 29215929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21191947 - 21191810
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21191947 agagacacaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21191848  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||  || |||  ||||||||||| |||  ||||||||    
T  21191847 ttttgaattagctgttgcttcactcttctggtcttctg 21191810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 35040164 - 35040301
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  |||| |||||||||||||| |||||||||    
T  35040164 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcc 35040263  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  35040264 tttcaaaatagtcgttgctttacttttctagtcttctg 35040301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 38282565 - 38282701
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||| ||||||||| ||||||    
T  38282565 agagacaaaaacagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcc 38282663  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||  |||||||||||| |||||||||||||    
T  38282664 tttcaaaatacccgttgcttcactcttccagtcttctg 38282701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 39201066 - 39200937
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||     
T  39201066 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaac 39200967  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||| || ||||||||||    
T  39200966 tagccgttgcttcactctttcagtcttctg 39200937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30893090 - 30893213
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||||| | ||| |||||||||    
T  30893090 agagacacaaacttagtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgctattcaaagaacaagcatctagtgctttcaaatcc 30893189  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
    ||||||||||| | ||||||||||    
T  30893190 tttcaaaatagcctttgcttcact 30893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2267087 - 2267224
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| ||||||||||||||||| |||||||| ||||||  |||||||||  |||||||| |||||||||||||||||| |    
T  2267087 agagacaaaaacatagtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattc 2267186  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  2267187 tttcaaactagttgttgcttcacttttccagtcttctg 2267224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 2834701 - 2834823
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||||||  |||||||||||| |||||||||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||| ||| |    
T  2834701 gagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaattagcc 2834800  T
Q  114 gttgcttcacttttccagtcttc 136  Q
    |||||||||||||| ||||||||    
T  2834801 gttgcttcactttttcagtcttc 2834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 30572203 - 30572332
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| || |||||||||| ||  |||||||||||||    
T  30572203 aaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaaa 30572302  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||  |||||||||||||||||    
T  30572303 tagccgttgctatacttttccagtcttctg 30572332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21028791 - 21028914
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||||||||| | |    
T  21028791 agagacacaaactgagtagtggagatagtggctgtacacttcatacaattgtactttgtcagcgctcttcaaaaagcaagcatccaatgccttcaacttc 21028890  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||||||||||||||||    
T  21028891 atttgaattagtcgttgcttcact 21028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 23036595 - 23036472
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||  ||||||||  |||||||||||||||||| |||||||||||||||||||||| |    
T  23036595 agtagaggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagttg 23036496  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||  |||||||||    
T  23036495 ttgtttcacttttttagtcttctg 23036472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 2268529 - 2268662
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||  | |||||||||| |||||||||||||||     
T  2268529 agagacaaaaacagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgacgaacaagcattcaatgccttcaaatca 2268628  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    ||||||||||   ||||||| ||| ||||||||||||    
T  2268629 tttcaaaata---gttgcttaactcttccagtcttct 2268662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12613896 - 12613760
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| ||||||| |    
T  12613896 agagacacaaacagagtagtgaaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcaaccaatgctttcaaat-c 12613798  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||  || ||| |||||||||||| |||  ||||||||    
T  12613797 ttttgaattagccgttgcttcactcttctggtcttctg 12613760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 48570313 - 48570176
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||  |||||    
T  48570313 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatcc 48570214  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||||||||| |  ||||||| |||||||||    
T  48570213 ttccaaaatagtcgttgttatacttttctagtcttctg 48570176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 17025029 - 17024923
Alignment:
Q  18 agtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttg 117  Q
    ||||||| |||||||||||||||||||||||||||  ||| | ||||||||| |||||||||||||||||||||||||||||||||  || |||||||||    
T  17025029 agtggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgccttcaaatccttttgaattagtcgttg 17024930  T
Q  118 cttcact 124  Q
    |||||||    
T  17024929 cttcact 17024923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 14263525 - 14263396
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  || |||||  |||||||||  | ||||||| |||||||||||||||||||||||||||    
T  14263525 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctttgaggaacaagtatccaatgccttcaaatcctttcaaaa 14263426  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||| ||  ||| ||||||||||||    
T  14263425 tagtcgttgttttgcttctccagtcttctg 14263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21702812 - 21702949
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||| ||||||| |  |||||    
T  21702812 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcc 21702911  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||  ||||||| |||||||||    
T  21702912 tttcaaaatagccgttgctatacttttcaagtcttctg 21702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44821627 - 44821491
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||  ||||| ||| ||| |||||  ||||| |||||| ||| ||||||||||||    
T  44821627 agagacaaaaacagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatcc 44821528  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    || ||||||||||||||||  |||||| |||||||||    
T  44821527 ttccaaaatagtcgttgctatactttttcagtcttct 44821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2327522 - 2327384
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatc 99  Q
    ||||||| || | ||||||||||| |||||||||||||||||||||||  ||||||||| || ||||||   || |||||||||||||||| ||| ||||    
T  2327522 agagacaaaaccagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgcgttcgaatc 2327423  T
Q  100 ctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||  ||||||||||||| ||||| ||||    
T  2327422 ctttcaaaatagtttttgcttcactttttcagtcatctg 2327384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26702211 - 26702116
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaa 96  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| | | ||||||||| | |||| |||||||||||||||    
T  26702211 agagacacatactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcatcactcttcaaaaagcaagaatccaatgccttcaa 26702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 46088987 - 46089115
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||         ||    
T  46088987 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatg---------cc 46089077  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||   |||||||||||||||||    
T  46089078 tttcaaaatagtcgttgccatacttttccagtcttctg 46089115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 7309830 - 7309953
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  || |||||| ||  |||||| |||||||||||||||||||||| | ||||||   |    
T  7309830 gagtattggaggtagtggttgtacacttcgtacaattgtactacgttaacgct-tttgaagaacgagcatccaatgccttcaaatccctacaaaatgacc 7309928  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||||| ||  |||||||||    
T  7309929 gttgcttcactcttatagtcttctg 7309953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 18896665 - 18896559
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||   |||| ||| ||||||  ||||||||||||||||||||| ||||  || ||| ||    
T  18896665 agtagtggaggtagtggttgtacacttcgtacaactgtccttttccaacgttctccaaagactaagcatccaatgccttcaaattcttttgaattagccg 18896566  T
Q  115 ttgcttc 121  Q
    |||||||    
T  18896565 ttgcttc 18896559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 7745159 - 7745066
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    ||||||||||| |||||||||||||||| ||| ||  ||||||||| |||||||||  ||| | ||||||| ||||| ||||||||||||||||    
T  7745159 gagtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaa 7745066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10250984 - 10251077
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||||  ||||| ||| ||  |||||  ||||| |||||||||||||||||    
T  10250984 agagacaaaaacagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttc 10251077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21121146 - 21121057
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||| ||||||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  21121146 agagacaaaaacagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21121057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21135242 - 21135153
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| ||| |||||  ||||| |||||||||||||    
T  21135242 agagacaaaaacagagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 21135153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 42284642 - 42284715
Alignment:
Q  17 tagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  42284642 tagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgc 42284715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21984607 - 21984683
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||||||  |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  21984607 gagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21984683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23024786 - 23024875
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  23024786 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgc 23024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37642246 - 37642335
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||| ||  ||||| ||| |||||||||  |||||  ||||||||||||    
T  37642246 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgc 37642335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19215610 - 19215658
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaat 49  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  19215610 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaat 19215658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 21204997 - 21204916
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| |||||||||  |||||  | ||||||||||    
T  21204997 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgc 21204916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 17371042 - 17371085
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  17371042 agacaaaaacagagtagtggaggtagtggttgtacacttcgtac 17371085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 17018590 - 17018664
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| ||||||||||||||||||| | || ||||| ||||   |||| ||| ||||||| |||||||||||||    
T  17018590 agtagtgaagatagtggttgtacactt-gcactattgtccttttccaacgttctccaaagaataagcatccaatgc 17018664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 44201011 - 44201054
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    |||||||||| |||| |||||| |||||||||||||||| ||||    
T  44201011 agacacaaacagagtcgtggaggtagtggttgtacactttgtac 44201054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 118; Significance: 1e-60; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32484 - 32621
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  32484 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgcattcaaatcc 32583  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  32584 tttcaaaatagtcgttacttcactcttccagtcttctg 32621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 49331 - 49468
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49331 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 49430  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| ||| | |||||||    
T  49431 tttcaaaatagtagttgcttcactcttcaaatcttctg 49468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 455 - 339
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||  ||| | |||||||||||||||||||||||||    
T  455 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 356  T
Q  103 tcaaaatagtcgttgct 119  Q
    ||||| ||| |||||||    
T  355 tcaaattagccgttgct 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 118; Significance: 1e-60; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 60015 - 60152
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  60015 agagacacaaactgagtagaagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaatcc 60114  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  60115 tttcaaaatagtcgttgcttcacttttccagtcttctg 60152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7925 - 8061
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||    
T  7925 agagacacaaacttcgtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgaattcaaatcc 8024  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    ||||||||||||||||||||||||||| |||||||||    
T  8025 tttcaaaatagtcgttgcttcacttttacagtcttct 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 115; Significance: 9e-59; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 115; E-Value: 9e-59
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26087 - 25953
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  26087 agagacacaaactgagtagtcgagatagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgccttcaaatcc 25988  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    |||||||||||||||||||||||||||||||||||    
T  25987 tttcaaaatagtcgttgcttcacttttccagtctt 25953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 44782 - 44680
Alignment:
Q  35 tacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtct 134  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44782 tacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaaatagacgttgcttcacttttccagtct 44683  T
Q  135 tct 137  Q
    |||    
T  44682 tct 44680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 114; Significance: 3e-58; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 474 - 611
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  474 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 573  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  574 tttcaaaatagtcgttgcttcactattccagtcttctg 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 114; Significance: 3e-58; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14647 - 14784
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  14647 agagacacaaactgagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcc 14746  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  14747 tttcaaaatagttgttgcttcactcttccagtcttctg 14784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 114; Significance: 3e-58; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 377671 - 377534
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  377671 agagacacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcc 377572  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||| ||||||||||||||||| |||| ||||||||    
T  377571 tttcaatatagtcgttgcttcactcttccggtcttctg 377534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 244390 - 244259
Alignment:
Q  7 acaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 106  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||  |    
T  244390 acaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatgtcttcaaatccttttga 244291  T
Q  107 aatagtcgttgcttcacttttccagtcttctg 138  Q
    | |||| ||||||||||| |||  ||||||||    
T  244290 attagttgttgcttcactcttctggtcttctg 244259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 220237 - 220359
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |    
T  220237 agaggcacaaactgagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatg-cttcaaattc 220335  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||| ||||||||||||    
T  220336 atttgaattagccgttgcttcact 220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 211397 - 211534
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||| |||||| |||||||||||  ||||| ||| |||||||||  ||||| ||||||| ||||| || ||||||    
T  211397 agagacaaaaacagagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatcc 211496  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  |||||||||||||||||    
T  211497 ttacaaaatagtcgttgctatacttttccagtcttctg 211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 3e-58; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 3e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 20112850 - 20112713
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20112850 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 20112751  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||| | |||| ||||||||    
T  20112750 tttcaaaatagtcgttgcttcattcttccggtcttctg 20112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18378313 - 18378447
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  18378313 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgccttcaaatcc 18378412  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    |||||||||||| ||||||| ||| ||||||||||    
T  18378413 tttcaaaatagttgttgcttgactcttccagtctt 18378447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15302199 - 15302336
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||    
T  15302199 agagacactaactgagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaatcc 15302298  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  15302299 tttcaaaatagccgttgcttcacttttccagtcttctg 15302336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 23284564 - 23284700
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  23284564 gagacacaaactgagtagtggagataatggttatacacttcgtacaattgtactttgtcaacgctcttcaaggaacaagcattcaatgccttcaaatcct 23284663  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||| ||||||||||||||||  ||||||||    
T  23284664 ttcaaaataggcgttgcttcacttttctggtcttctg 23284700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15987232 - 15987370
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat-c 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  15987232 agagacacaaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 15987331  T
Q  100 ctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||| ||||||||| |||||||||| |||  ||||||||    
T  15987332 cttttaaaatagtcattgcttcactcttctggtcttctg 15987370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12715570 - 12715433
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||| |||||| ||||||||     
T  12715570 agagacacaaactgagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgctcttcaaagaataggcatacaatgctttcaaatca 12715471  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| || || |||||||    
T  12715470 tttcaaaatagtcgttgcttcactctttcaatcttctg 12715433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13602171 - 13602308
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||| ||||||||||| ||||||||||||||||||| ||     
T  13602171 agagacacaaactgagtagtggagatagtggttatacacttcttacaattgtattttgtcaacgttcttcaaagaataagcatccaatgccttcaattca 13602270  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  13602271 tttcaaaatagtggttgcttcactcttccagtcttctg 13602308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24116827 - 24116936
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  24116827 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 24116926  T
Q  101 tttcaaaata 110  Q
    ||||||||||    
T  24116927 tttcaaaata 24116936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9717842 - 9717978
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||| |||||||| ||||||    
T  9717842 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctttaaatcc 9717941  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  9717942 tttcaaaatagttgttgcttcactcttccagtcttct 9717978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 20730853 - 20730717
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||| |||| ||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||  |||||||| |||||||||||||||||||||    
T  20730853 gagacaaaaacagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcct 20730754  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||| ||||||||||||||||||||||||||||||    
T  20730753 ttcaaactagtcgttgcttcacttttccagtcttctg 20730717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32544264 - 32544401
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| || ||||||||||||| ||||||    
T  32544264 agagacagaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaaatcc 32544363  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  32544364 tttcaaaatagacgttgcttcactcttccagtcttctg 32544401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 13435544 - 13435668
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  13435544 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttcaaagaacaatcattcaatgctttcaaatcctttcaaaatagtc 13435643  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||||| ||||| |||||||    
T  13435644 gttgcttcactcttccaatcttctg 13435668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 14100582 - 14100454
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14100582 aaacagagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgccttcaaatcctttcaaaa 14100483  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    |||| ||| ||||||| ||||||||||||    
T  14100482 tagttgtttcttcactcttccagtcttct 14100454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 29918018 - 29918153
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||  ||||||||||||| ||    
T  29918018 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctgatgccttcaaatcttt 29918117  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| |||||||||||||||||||||| |||||||    
T  29918118 tcaaactagtcgttgcttcacttttccaatcttctg 29918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18435555 - 18435689
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| | ||| ||||| |||||||||||||||| ||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  18435555 agagacaaaaacagtgtactggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 18435654  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtctt 135  Q
    |||||||||||||||||||||||||||| ||||||    
T  18435655 tttcaaaatagtcgttgcttcacttttctagtctt 18435689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15954702 - 15954839
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  || ||||||||| ||||||||||||||||    
T  15954702 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcc 15954801  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  15954802 tttcaaattagtcgttgcttcatttttccagtcttctg 15954839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 20488060 - 20487931
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| ||||||||||| |||||||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  20488060 aaacagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaa 20487961  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| ||||||||||||||| ||||||||||    
T  20487960 tagccgttgcttcacttttacagtcttctg 20487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19086157 - 19086284
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||          |    
T  19086157 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg----------c 19086246  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| | |||||||||||    
T  19086247 tttcaaaatagtcgttgcttcactctcccagtcttctg 19086284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 19623980 - 19624101
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtact-ttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||| |||||||||| ||||||||||    
T  19623980 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactagtgt-aacgctctccaaagaacaatcatccaatgctttcaaatcct 19624078  T
Q  102 ttcaaaatagtcgttgcttcact 124  Q
    |||| ||||||||||||||||||    
T  19624079 ttcagaatagtcgttgcttcact 19624101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22802140 - 22802277
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||| |    
T  22802140 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgcctttaaattc 22802239  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| | ||||||| ||||||||||||||| ||||    
T  22802240 tttcaaacttgtcgttgtttcacttttccagtcgtctg 22802277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 12423261 - 12423397
Alignment:
Q  2 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcct 101  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| |||||| |||||||||| ||||||    
T  12423261 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcct 12423360  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||  |||||||||||||||||    
T  12423361 ttcaaaatagtcgttgctatacttttccagtcttctg 12423397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 16265300 - 16265168
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||  ||||||||||||||||||| |||||| ||    
T  16265300 agagacacaaacagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgcattcaaaacc 16265201  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtc 133  Q
    ||||||  || ||||||||||||||||||||||    
T  16265200 tttcaatctactcgttgcttcacttttccagtc 16265168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 21618251 - 21618379
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||||||||||| |||||    
T  21618251 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaa 21618350  T
Q  109 tagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||| ||||||||||||||||    
T  21618351 tagtcgttgctttacttttccagtcttct 21618379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 26972376 - 26972241
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| | |||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||  |||||||| ||||||||||||| ||||||    
T  26972376 agagacaaatactgagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgcctttaaatcc 26972279  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| ||| |||||||||    
T  26972278 tttcaaaatagttgttgcttcactcttcaagtcttctg 26972241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15531774 - 15531637
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| | || ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  15531774 agagacaaagacagagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 15531675  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||  ||||| || ||| ||| |||||||||    
T  15531674 tttcaaaataaccgttgttttactcttctagtcttctg 15531637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16336126 - 16336263
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||  ||||| |||||| |||||||||| |||||    
T  16336126 agagacaaaaacagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatcc 16336225  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  |||||||||||||||||    
T  16336226 ttccaaaatagtcgttgctatacttttccagtcttctg 16336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 19688790 - 19688901
Alignment:
Q  26 tagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 125  Q
    |||||||| ||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||     
T  19688790 tagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtccttgcttcactc 19688889  T
Q  126 ttccagtcttct 137  Q
    ||||||| ||||    
T  19688890 ttccagttttct 19688901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 21625114 - 21625236
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||||| |||||| ||    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgccttcaaatgctttc-aaatagccg 21625212  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    |||||| ||| ||||| |||||||    
T  21625213 ttgctttactcttccaatcttctg 21625236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 12348995 - 12349129
Alignment:
Q  4 gacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 103  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||  ||||||||    
T  12348995 gacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatccttt 12349094  T
Q  104 caaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||  |||||||||||||||||    
T  12349095 caaaatagtcgttgctatacttttccagtcttctg 12349129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 19833175 - 19833045
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||| ||||||||||| ||||| |||||||||||||||||  ||||| ||| |||||||||   || |||||||||||||||| ||||||||||||||||    
T  19833175 aaacagagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 19833076  T
Q  108 atagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||||||||||    
T  19833075 atagtcgttgcttcacttttccagtcttctg 19833045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22076557 - 22076420
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||  ||||| ||||||| ||||| ||| |||||    
T  22076557 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatcc 22076458  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  ||||||| |||||||||    
T  22076457 ttccaaaatagtcgttgctatacttttcgagtcttctg 22076420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 26943577 - 26943712
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||||     
T  26943577 agacaaaaacagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgccttctaatccta 26943676  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |  ||||||  ||||||||||| ||| |||||||||    
T  26943677 ttgaaatagcggttgcttcactcttctagtcttctg 26943712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 10640555 - 10640431
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgta-aacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 113  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||| ||||||||||||||||||  || |||||    
T  10640555 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttcaacgctcttcaaagaacaagcatctaatgccttcaaatccttttgaattagtc 10640456  T
Q  114 gttgcttcacttttccagtcttctg 138  Q
    ||||||||||| |||  ||||||||    
T  10640455 gttgcttcactcttctggtcttctg 10640431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25594067 - 25594155
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatg 89  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  25594067 agagacacaaactgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgcgcttcaaagaacaagcatccaatg 25594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 16877220 - 16877349
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  | |||  |||||||||| |||||||||||||| || |    
T  16877220 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaatccttttaaga 16877319  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||  ||||||||||    
T  16877320 tagtcgttgcttcactttctcagtcttctg 16877349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 19470683 - 19470790
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| ||||||||||| ||||||||||||||| |||| |  ||||||| ||||||||||||||||||||||||||||||||||  || ||||||    
T  19470683 agtagtggaggtagtggttgtaaacttcgtacaattgtcctttttccacgctctgcaaagaacaagcatccaatgccttcaaatccttttgaattagtcg 19470782  T
Q  115 ttgcttca 122  Q
    ||||||||    
T  19470783 ttgcttca 19470790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 21235137 - 21235229
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 106  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||    
T  21235137 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgccttcaaatgctttcaa 21235229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 34451787 - 34451681
Alignment:
Q  32 ttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccag 131  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||| | |||| |||||| |||||||||| ||||| |||||||||||||||| || |||    
T  34451787 ttgtacactttgtacaattgtactttgtcaacgcttttcaaagaataggcatacaatgctttcaaatcctctcaaattagtcgttgcttcactctttcag 34451688  T
Q  132 tcttctg 138  Q
    |||||||    
T  34451687 tcttctg 34451681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33352076 - 33351941
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||||  ||||| ||| |||||||||  ||||| || |||||||||  ||  |||||    
T  33352076 agagacaaaaacagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctctt-gaagaataaacatccaatgtttttcaatcc 33351978  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||| | |||||  |||||||||||||||||    
T  33351977 tttcaaaatag-ccttgctatacttttccagtcttctg 33351941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19066168 - 19066079
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||   |||| ||| |||||||||  ||||| |||||||||||||    
T  19066168 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgc 19066079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 25597558 - 25597614
Alignment:
Q  81 catccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttct 25597614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17381520 - 17381598
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaa 79  Q
    ||||||| |||| || |||||||| ||||| |||||||||||||||||  ||||||||| |||||||||  ||||||||    
T  17381520 agagacaaaaacagaatagtggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaa 17381598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19482751 - 19482840
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  19482751 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgc 19482840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 25930485 - 25930568
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    ||||||||||||||||||||||||| || |||| ||| | ||||   |||||||||||| ||| |||||||||||| ||||||||    
T  25930485 gagtagtggagatagtggttgtacaatt-gtactattatccttttccaacgctcttcaaggaataagcatccaatgacttcaaat 25930568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 14051529 - 14051425
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| |||||||||||  ||||| ||||| |||||||||| ||||||||||  || |||||  ||| | |||||||||||| |||||||| | |    
T  14051529 agacaaaaacagagtagtggaggaagtggctgtacgcttcgtacaa-tgtactttgtcgactctctttgaaggataagcatccaatgacttcaaattcct 14051431  T
Q  103 tcaaaa 108  Q
    ||||||    
T  14051430 tcaaaa 14051425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 14070204 - 14070106
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||  ||||| ||||| |||||||||| ||||||||||  || |||||  ||| | |||||||||||| |||||||| | |||||||    
T  14070204 aaacagagtagtggaggaagtggctgtacgcttcgtacaa-tgtactttgtcgactctctttgaaggataagcatccaatgacttcaaattccttcaaaa 14070106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17316675 - 17316628
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 48  Q
    ||||||| ||||  ||||||| ||||||||||||||||||||||||||    
T  17316675 agagacaaaaacatagtagtgcagatagtggttgtacacttcgtacaa 17316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 20635720 - 20635763
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||    
T  20635720 agacaaaaacagagtagtggaggtagtggttgtacactttgtac 20635763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 22386803 - 22386846
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||    
T  22386803 agacaaaaacagagtagtggaggtagtggttgtacacttggtac 22386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 110; Significance: 8e-56; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13570 - 13707
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  13570 agagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgccttcaaatcc 13669  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| ||||| |||||||    
T  13670 tttcaaaatagttgttgcttcactattccaatcttctg 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 110; Significance: 8e-56; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 12208 - 12345
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |    
T  12208 agagacacaatctgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaattc 12307  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  12308 tttcaaaatagttgttgcttcactcttccagtcttctg 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 110; Significance: 8e-56; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 110; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1689 - 1826
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  1689 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcc 1788  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| |||||||||||  ||||||||||||    
T  1789 tttcaaaatagttgttgcttcactcctccagtcttctg 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 106; Significance: 2e-53; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10220 - 10083
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  10220 agagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgccttcaaatcc 10121  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  10120 tttcaaaatagtcgttgcttcactcttctagtcttctg 10083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14884 - 14816
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||    
T  14884 agagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctt 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 102; Significance: 5e-51; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 767 - 630
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  767 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 668  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  667 tttcaaaatagtcgttgcttcacttttccagtcttctg 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 1865 - 1778
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||  ||||| |||||||||||||    
T  1865 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 1778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 101; Significance: 2e-50; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 5802 - 5666
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  5802 agagacacaaactgagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgccttcatatcc 5703  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttct 137  Q
    |||||||||||  |||||| |||| ||||| ||||||    
T  5702 tttcaaaatagatgttgctccactcttccaatcttct 5666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22675 - 22812
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||| |||| |||||||||||||||| ||| |||||  ||||| |||||||||||||||||||||||    
T  22675 agagacaaaaacagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcc 22774  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22775 tttcaaaatagtcgttgcttcacttttccagtcttctg 22812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15116 - 15253
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  15116 agagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcc 15215  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||| ||||||||| |||  ||||||||    
T  15216 tttcaaaatagtcgatgcttcactcttctggtcttctg 15253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 78478 - 78341
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  ||||||| || |||||||||||||||||||||||  ||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  78478 agagacaaaaacatagtagtgtaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcc 78379  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  78378 tttcaaaatagtcgttgcttcacttttccagtcttctg 78341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 98; Significance: 1e-48; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19584 - 19447
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| || ||||||    
T  19584 agagacacaaactgagtagtgaatatagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatcc 19485  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||||||| ||| |||||||||    
T  19484 tttcaaaatagttgttgcttcactcttctagtcttctg 19447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 99317 - 99182
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |  || |||  ||||| ||||||||||||||||  |||||    
T  99317 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtca--gcgctttgaagaataagcatccaatgccttgtaatcc 99220  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || ||||||||||||||||  |||||||| ||| ||||    
T  99219 ttccaaaatagtcgttgctatacttttccggtcatctg 99182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 29809 - 29885
Alignment:
Q  17 tagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttc 94  Q
    ||||||||||||||||||| ||||| |||| ||||| ||||   |||| ||| ||||||| |||||||||||||||||    
T  29809 tagtggagatagtggttgtccactt-gtactattgtccttttcgaacgttctccaaagaataagcatccaatgccttc 29885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 94; Significance: 3e-46; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9968 - 10105
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||    
T  9968 agagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgctttcaaatcc 10067  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||| ||||||| ||| |||||||||    
T  10068 tttcaaaatagtcgttacttcactcttctagtcttctg 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 94; Significance: 3e-46; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36887 - 36750
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||| ||| ||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  36887 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 36788  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||||||||||||||| |||| ||||    
T  36787 tttcaaattagtcgttgcttcacttttctagtcatctg 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 42118 - 42255
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||| ||| ||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  42118 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 42217  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||| |||||||||||||||||||| |||| ||||    
T  42218 tttcaaattagtcgttgcttcacttttctagtcatctg 42255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 94; Significance: 3e-46; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 215601 - 215472
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  215601 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaa 215502  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    ||| |||||||||||||||| |||||||||    
T  215501 tagccgttgcttcacttttctagtcttctg 215472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 94; Significance: 3e-46; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 90167 - 90026
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| ||| |||||||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||||||||||||||    
T  90167 agagacaaaaacagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 90068  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  90067 tttcaaaatagccgttggttcactcttccagtcttctgtaat 90026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 712 - 790
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    |||||||||||||| |||||||||| || |||| ||||| ||||   |||||||||||||||| ||||||||||||||||    
T  712 gagtagtggagataatggttgtacaatt-gtactattgtccttttcgaacgctcttcaaagaataagcatccaatgcctt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 93; Significance: 1e-45; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 212355 - 212491
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc-t 101  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |    
T  212355 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctt 212454  T
Q  102 ttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| ||||||||||| ||| |||||||||    
T  212455 ttaaaaatagttgttgcttcactcttctagtcttctg 212491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 6251 - 6173
Alignment:
Q  60 aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6251 aaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctg 6173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 90; Significance: 7e-44; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1659 - 1796
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||    
T  1659 agagacaaaaacaaagtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgctttcaaatcc 1758  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||| |||||| ||| |||||||||    
T  1759 tttcaaaatagtcgttgtttcactcttctagtcttctg 1796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6852 - 6715
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||  ||||| ||||| |||||||||||||||||||||||  ||||||||| || ||||||  ||||||||||||||||||||||||||||     
T  6852 agagacaaaaatagagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatct 6753  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6752 tttcaaaatagtcggtgcttcacttttccagtcttctg 6715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 86; Significance: 2e-41; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19030 - 19167
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||   |||||||||  ||||||||||||| |||||||| ||||||    
T  19030 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgcctttaaatcc 19129  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| |||||||||||| |||||||||||||    
T  19130 ttccaaaatagccgttgcttcactcttccagtcttctg 19167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9559 - 9696
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||   |||| |||||||||||||| |  |||||    
T  9559 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcc 9658  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||  ||||| |||||||||||    
T  9659 tttcaaaatagtcgttgctatactttcccagtcttctg 9696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22243 - 22106
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||  ||| | ||| ||||||| |  ||||| ||||||||||||||||| |||||    
T  22243 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatcc 22144  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||  || ||||||||||||  |||| ||||||||||||    
T  22143 ttcaaagatagtcgttgctatacttctccagtcttctg 22106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21083 - 20946
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||  ||||| |||||||||||||||||||||||    
T  21083 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgccttcaaatcc 20984  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||   |||||||||||| ||| |||||||||    
T  20983 tttcaaaatgaccgttgcttcactcttctagtcttctg 20946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 85; Significance: 7e-41; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 7708 - 7836
Alignment:
Q  7 acaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| || ||| ||||||||| |||||||| |||    
T  7708 acaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatacaatgcctttaaatccttccaa 7807  T
Q  107 aatagtcgttgcttcacttttccagtctt 135  Q
    ||||||||| |||||||| ||||||||||    
T  7808 aatagtcgtggcttcactcttccagtctt 7836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 85; Significance: 7e-41; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 15792 - 15916
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaatt-gtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatc 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| ||    
T  15792 agagacacaaactgagtagtagagatggtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaagtc 15891  T
Q  100 ctttcaaaatagtcgttgcttcact 124  Q
    ||||||||||| | | |||||||||    
T  15892 ctttcaaaataattggtgcttcact 15916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 3e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 103585 - 103708
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| | ||| ||||||||||| ||    
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaaaatagccg 103684  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    |||||||||| |||||||||||||    
T  103685 ttgcttcactcttccagtcttctg 103708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1811 - 1674
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| |||| || |||||||||||||||||||| ||  ||||||||| |||||||||  |||||||| |||||| |||||||||||||    
T  1811 agagacaaaaacagagcagtgaaggtagtggttgtacacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcc 1712  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||||||| |||||||||    
T  1711 tttcaaaatagtcgttgcttcacttttcaagtcttctg 1674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 5040 - 4923
Alignment:
Q  20 tggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgct 119  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  5040 tggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgccttcaaatcctttcaaaatagtcgtcgct 4941  T
Q  120 tcacttttccagtcttct 137  Q
    ||||| || |||||||||    
T  4940 tcactctttcagtcttct 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 27541 - 27404
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||  |||| |||||||||||||||||| |||||    
T  27541 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaatcc 27442  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    | |||||||||  ||||||||||| || ||||||||||    
T  27441 tatcaaaatagctgttgcttcactctttcagtcttctg 27404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5714 - 5577
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| ||||  |||||||||| ||||||||||||||||| || || |||||||||| |||||||||  ||||| ||||||| |||||||||||||||    
T  5714 agagacaaaaacatagtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcc 5615  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  5614 tttcaaaatagttgttgctttacttttccagtcttctg 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 60802 - 60939
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  |||||||||||| |||||||||| |||||    
T  60802 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatcc 60901  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| |||||||  |||||||||||||||||    
T  60902 ttccaaaatagccgttgctatacttttccagtcttctg 60939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6006 - 6126
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    |||||||||||  ||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6006 agagacacaaatagagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 6105  T
Q  101 tttcaaaatagtcgttgcttc 121  Q
    |||  || |||| ||||||||    
T  6106 ttttgaattagttgttgcttc 6126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 9958 - 10078
Alignment:
Q  4 gacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 103  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||    
T  9958 gacacaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgccttcaaattcatt 10057  T
Q  104 caaaatagtcgttgcttcact 124  Q
      || ||| ||||||||||||    
T  10058 tgaattagccgttgcttcact 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 9168 - 9291
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||||||||||||| ||||||| |||||||||||    
T  9168 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagtcg 9267  T
Q  115 ttgcttcacttttccagtcttctg 138  Q
    |||||  ||||||||| |||||||    
T  9268 ttgctatacttttccaatcttctg 9291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 74; Significance: 3e-34; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9902 - 9999
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaat 98  Q
    ||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  9902 agagacacaaacatagtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaat 9999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 30282 - 30360
Alignment:
Q  60 aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  30282 aaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctg 30360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 70; Significance: 6e-32; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 1619 - 1510
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||| ||||||||||| || | |||||||||||||||||||||  |||||||||    
T  1619 agtagtggagatagtggttgtacacttcgtacaattgtccttttccaacgttcttcaaagaataaacgtccaatgccttcaaatccttttgaaatagtcg 1520  T
Q  115 ttgcttcact 124  Q
    ||||||||||    
T  1519 ttgcttcact 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 66; Significance: 1e-29; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 7260 - 7131
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||  ||| |||| | ||  ||||| ||||||||||||| ||| ||||||| |||||    
T  7260 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaa 7161  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||  |||||||||||||||||    
T  7160 tagtcgttgctatacttttccagtcttctg 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 66; Significance: 1e-29; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 5634 - 5762
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||   |||| ||| ||||||| ||||||||||||||||||||| | ||  |||    
T  5634 aaactgagtagtggaggtagtggttgtacacttcgtacaattgta-ttttccaacgttctccaaagaataagcatccaatgccttcaaattcatttgaaa 5732  T
Q  109 tagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||| | ||| |||||||||    
T  5733 tagtcgttgcttcattcttctagtcttctg 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 65; Significance: 6e-29; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 9825 - 9917
Alignment:
Q  32 ttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 124  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  9825 ttgtacactttgtacaattgtactatgtcaacgctcttcaaagcacaagcatccaatgctttcaagtcctttcaaaatagtcgttacttcact 9917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7823 - 7858
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgta 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7823 agagacacaaactgagtagaggagatagtggttgta 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 62; Significance: 4e-27; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2842 - 2706
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| ||| |||||  ||||| | ||||||||||| ||| || ||    
T  2842 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatgctttccaa-cc 2744  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||||||||||   |||||||||||||||||    
T  2743 ttccaaaatagtcgttgcaatacttttccagtcttctg 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 1e-26; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 165056 - 164940
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||  ||| | |||||||||||||||||||||||||    
T  165056 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 164957  T
Q  103 tcaaaatagtcgttgct 119  Q
    ||||| |||| ||||||    
T  164956 tcaaattagttgttgct 164940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 65485 - 65403
Alignment:
Q  56 ttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||||  ||||| |||||||||||||| |  ||||||||||||||||||||| ||  |||||||||||||||||    
T  65485 ttgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctg 65403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 144530 - 144448
Alignment:
Q  56 ttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||| |||||||||  ||||| |||||||||||||| |  ||||||||||||| ||||||||||  |||||||||||||||||    
T  144530 ttgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctg 144448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 832 - 761
Alignment:
Q  67 cttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  832 cttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctg 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 2090 - 2027
Alignment:
Q  18 agtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagc 81  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2090 agtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagc 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 60; Significance: 6e-26; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25511 - 25384
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| ||| |||||  ||||| ||  |||||||||| |  |||||    
T  25511 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcccttcaatcc 25412  T
Q  101 tttcaaaatagtcgttgcttcacttttc 128  Q
    |||||||||||||||||||  |||||||    
T  25411 tttcaaaatagtcgttgctatacttttc 25384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15851 - 15811
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacactt 41  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  15851 agagacaaaaacagagtagtggagatagtggttgtacactt 15811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 44023 - 43908
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||| |||| | |||||||||||| ||||| |||||||||||||||||||| |||  ||     
T  44023 aaacagagtagtggagatagtggttgtacaattcgtacaaatgtcctttttcaacgctcttcaaggaacaggcatccaatgccttcaaatctttttgaat 43924  T
Q  109 tagtcgttgcttcact 124  Q
    ||| | ||||||||||    
T  43923 tagcctttgcttcact 43908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 6e-26; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 159054 - 159177
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||||||||  |||||| ||| |||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||| |    
T  159054 agagacacaaacaaagtagtagaggtagtggttttacacttcatacaattgtcctttgtcaacgctcttcaaagaacaagcatataatgccttcaaattc 159153  T
Q  101 tttcaaaatagtcgttgcttcact 124  Q
     ||  || ||| ||||||||||||    
T  159154 atttgaattagccgttgcttcact 159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 39483 - 39565
Alignment:
Q  60 aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||| ||||||    
T  39483 aaacactctttaaagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaat 39565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 137543 - 137625
Alignment:
Q  60 aaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaat 142  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||| ||||||    
T  137543 aaacactctttaaagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaat 137625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37401 - 37458
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttg 58  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  37401 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttg 37458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 135461 - 135518
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttg 58  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  135461 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttg 135518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 143129 - 143224
Alignment:
Q  43 gtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    ||||| |||||||||   |||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  143129 gtacacttgtacttttccaacgctctttgaagaacaagcatccaatgcctttaaatccttccaaaatagtcgttgcttcactcttccagtcttctg 143224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 1324 - 1410
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||| ||||||||||    
T  1324 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 87 - 1
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||| ||||||||||    
T  87 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 59; Significance: 2e-25; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 36281 - 36159
Alignment:
Q  16 gtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgt 115  Q
    ||||||||||||||||||||||||||||||||||||| | || | ||| |||| ||| ||| |||||||||||||||| ||| || ||  ||||||| ||    
T  36281 gtagtggagatagtggttgtacacttcgtacaattgtccattttcaactctctccaacgaaaaagcatccaatgcctttaaaaccatttgaaatagttgt 36182  T
Q  116 tgcttcacttttccagtcttctg 138  Q
    ||||||| | |||||||||||||    
T  36181 tgcttcattcttccagtcttctg 36159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25777 - 25688
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| |||||| ||  ||||| |||||||||||||    
T  25777 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgc 25688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34916 - 34827
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||| ||| |||||||||  ||||| |||||||||||||    
T  34916 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 34827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 58; Significance: 9e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3303 - 3440
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||||| |||| ||| ||||||| |||||||||||||||| ||||||  ||||| | | |||||||||  ||||| || ||||||||||||||||||||    
T  3303 agagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatcc 3402  T
Q  101 tttcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    || |||||||| ||||| |  ||||||||| |||||||    
T  3403 ttccaaaatagccgttgttatacttttccaatcttctg 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 15732 - 15617
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||   ||||||||| || ||||||  ||  | |||||||||||||||||||||||||    
T  15732 agacataaacagagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgccttcaaatcctt 15633  T
Q  103 tcaaaatagtcgttgc 118  Q
    ||||| ||| ||||||    
T  15632 tcaaactagccgttgc 15617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 40638 - 40773
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 102  Q
    ||||| |||| |||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||||||| | ||||  |||||||||||| |||    
T  40638 agacataaacagagtagtgaaggtagtggttgtacacttcttacaattgttctttttcaacgctcttcaaagaaccaccatcatatgccttcaaattctt 40737  T
Q  103 tcaaaatagtcgttgcttcacttttccagtcttctg 138  Q
    |  || ||| |||||||||||| |||  ||||||||    
T  40738 ttgaattagccgttgcttcactcttctggtcttctg 40773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 55; Significance: 5e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 74580 - 74682
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcc 100  Q
    ||||| ||||||  |||||| ||| ||||||||||||||||| |||||||||||||||| || ||| |||||||| |||||||| ||| |||||||||||    
T  74580 agagatacaaacaaagtagtagaggtagtggttgtacacttcatacaattgtactttgtcaatgcttttcaaagagcaagcatctaattccttcaaatcc 74679  T
Q  101 ttt 103  Q
    |||    
T  74680 ttt 74682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 54; Significance: 2e-22; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 38189 - 38080
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 108  Q
    |||| ||||||||||| ||||||| |||||||||||||    ||||||||| |||||||||  ||| | ||||||||||||||||||||||||||||||     
T  38189 aaacagagtagtggaggtagtggtcgtacacttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaat 38090  T
Q  109 tagtcgttgc 118  Q
    ||||| ||||    
T  38089 tagtcattgc 38080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 7963 - 8068
Alignment:
Q  33 tgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagt 132  Q
    ||||||||||||||||  ||||| ||| |||||||||  ||||| ||||||| |||||  |  ||||||||||||||||||||||||  |||||||||||    
T  7963 tgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagt 8062  T
Q  133 cttctg 138  Q
    ||||||    
T  8063 cttctg 8068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 49; Significance: 2e-19; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17877 - 17785
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgcctt 93  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||||  ||||| ||| |||||||||  ||| | ||||||||||||||||    
T  17877 agagacaaaaacagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcctt 17785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 49; Significance: 2e-19; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 1895 - 1803
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 107  Q
    |||||||||| ||||||| |||||||||||| |   ||||||||| |||||||||  ||| | ||||||||||||||||||||||||||||||    
T  1895 agtagtggaggtagtggtcgtacacttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 1803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 7383 - 7469
Alignment:
Q  4 gacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||| |||||| ||| |||||||||  | |||  ||||||||||||    
T  7383 gacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgc 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 925 - 846
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaat 88  Q
    |||| ||||||||||  |||||||||||||||||||||||  ||| | ||| |||||||||  ||||| |||||||||||    
T  925 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaat 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2803 - 2738
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgct 66  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||| ||| ||||||    
T  2803 agagacaaaaacagagtagtggagttagtggttgtacacttcatacaaacgtactatgtcaacgct 2738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 31888 - 31808
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||| ||||   |||| ||| ||||||| |||||||||||||    
T  31888 aaacagagtagtggaggtagtggttgtacactt-gtactattgtccttttccaacgttctccaaagaataagcatccaatgc 31808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 87712 - 87623
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||||||   ||||| ||| |||||||||  |||||   |||||||||||    
T  87712 agagacagaaacagagtagtggaagtagtggttgtacacttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgc 87623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 3999 - 3939
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    |||| ||| ||||||| ||||||| ||||||||||||||  |||||||||| |||||||||    
T  3999 aaacagagaagtggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctt 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6005 - 6043
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgtacac 39  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  6005 agagacaaaaacagagtagtggagatagtggttgtacac 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 731 - 812
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctcttcaaagaacaagcatccaatgc 90  Q
    |||| |||||||| |||||||| |||||||||||||||||  | ||| ||| ||||||| |  | ||| |||||||||||||    
T  731 aaacagagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgc 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 7292 - 7352
Alignment:
Q  9 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtaaacgctctt 69  Q
    |||| ||| ||||||| ||||||| ||||||||||||||  |||||||||| ||| |||||    
T  7292 aaacagagaagtggaggtagtggtcgtacacttcgtacatatgtactttgtcaacactctt 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 6621 - 6589
Alignment:
Q  14 gagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||||||||| |||||||||||||||||||||    
T  6621 gagtagtggaggtagtggttgtacacttcgtac 6589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 46
Target Start/End: Complemental strand, 1033 - 1002
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtac 46  Q
    |||||||||| |||||||||||||||||||||    
T  1033 agtagtggaggtagtggttgtacacttcgtac 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 46
Target Start/End: Complemental strand, 1226 - 1195
Alignment:
Q  15 agtagtggagatagtggttgtacacttcgtac 46  Q
    |||||||||| |||||||||||||||||||||    
T  1226 agtagtggaggtagtggttgtacacttcgtac 1195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 20487 - 20444
Alignment:
Q  3 agacacaaactgagtagtggagatagtggttgtacacttcgtac 46  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||    
T  20487 agacaaaaacagagtagtggaggtagtggttgtacactttgtac 20444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 84394 - 84429
Alignment:
Q  1 agagacacaaactgagtagtggagatagtggttgta 36  Q
    ||||||| |||||||||||||||| |||||||||||    
T  84394 agagacaaaaactgagtagtggaggtagtggttgta 84429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University