View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5840-3 (Length: 251)
Name: Solexa-NF5840-3
Description: NF5840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5840-3 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 8921125 - 8921366
Alignment:
| Q |
11 |
tgaattaaaggtaatgtatccctaatgacaagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctctcggttaactattt |
110 |
Q |
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| T |
8921125 |
tgaattaaaggtaatgtatctctaatgacaagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctctcggttaactattt |
8921224 |
T |
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| Q |
111 |
aattacctccactaattatctctctccacttcaagagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaagacctaaagttgaa |
210 |
Q |
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| T |
8921225 |
aattacctccactaattatctctctccacttcatgagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaagacctaaagttgaa |
8921324 |
T |
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| Q |
211 |
tgaatctaatccccgtc-aactctacatgccccatacacctt |
251 |
Q |
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| T |
8921325 |
tgaatctaatccccgtcaaactctgcatgccccatacacctt |
8921366 |
T |
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