View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5840-32 (Length: 105)
Name: Solexa-NF5840-32
Description: NF5840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5840-32 |
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Alignment Details
Target: chr8 (Bit Score: 86; Significance: 1e-41; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-41
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 8895241 - 8895152
Alignment:
| Q |
8 |
gtacttggtgcccttcaattattattttttaaatggatagatttttgtttccaaaagattaagtgagttggttctcataggctcactagg |
97 |
Q |
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| T |
8895241 |
gtacttggtgcccttcaattattattttttaaatggatagatttttgtttccaaaagattaagtgagttggttctgataggctcactagg |
8895152 |
T |
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