View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5841-15 (Length: 130)
Name: Solexa-NF5841-15
Description: NF5841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5841-15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 115; Significance: 8e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 8e-59
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 30403592 - 30403714
Alignment:
| Q |
8 |
gttagtttgttgatcagcatctagtttgaaacacttgatcttttatgtgggggaatatcagaagttcaatcattttctattggtattttcattattgtaa |
107 |
Q |
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| T |
30403592 |
gttagtttgttgatccgcatctattttgaaacacttgatcttttatgtgggggaatatcagaagttcaatcattttctattggtattttcattattgtaa |
30403691 |
T |
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| Q |
108 |
atggttatttactccgattgcag |
130 |
Q |
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| T |
30403692 |
atggttatttactccgattgcag |
30403714 |
T |
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