View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: Solexa-NF5841-28 (Length: 103)
Name: Solexa-NF5841-28
Description: NF5841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5841-28 |
 | |
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| [»] chr2 (22 HSPs) |
| |
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| [»] chr8 (10 HSPs) |
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| [»] chr7 (15 HSPs) |
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| [»] chr4 (14 HSPs) |
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| [»] scaffold0642 (1 HSPs) |
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| [»] scaffold0345 (1 HSPs) |
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| [»] scaffold0121 (1 HSPs) |
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| [»] scaffold0105 (1 HSPs) |
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| [»] chr3 (24 HSPs) |
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| [»] chr1 (22 HSPs) |
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| [»] scaffold0097 (3 HSPs) |
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| [»] chr5 (12 HSPs) |
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| [»] chr6 (9 HSPs) |
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| [»] scaffold0374 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 99; Significance: 2e-49; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-49
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5013570 - 5013672
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5013570 |
cacattacgaaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
5013669 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
5013670 |
acc |
5013672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 5e-47
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 207843 - 207741
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
207843 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
207744 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
207743 |
acc |
207741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26456003 - 26455901
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26456003 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
26455904 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
26455903 |
acc |
26455901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6123808 - 6123706
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6123808 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
6123709 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
6123708 |
acc |
6123706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40605465 - 40605363
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40605465 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
40605366 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
40605365 |
acc |
40605363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1512869 - 1512767
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1512869 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcagcaatcaatatttttaaaccacccctcgaagta |
1512770 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
1512769 |
acc |
1512767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 184229 - 184127
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
184229 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
184130 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
184129 |
acc |
184127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 976087 - 976189
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
976087 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
976186 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
976187 |
acc |
976189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2449463 - 2449361
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2449463 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
2449364 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
2449363 |
acc |
2449361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13908357 - 13908255
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| ||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13908357 |
cacattacggaaaacttttctatagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
13908258 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
13908257 |
acc |
13908255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 13905422 - 13905323
Alignment:
| Q |
4 |
attacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
|||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
13905422 |
attacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagtaacc |
13905323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35432179 - 35432280
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35432179 |
cacattatggaaaacttctctgtagc-cacatttgatgcaacatcgctatcatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaagta |
35432277 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
35432278 |
acc |
35432280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19822000 - 19821904
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
|||||| || ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19822000 |
cacattccggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaaccacccctcgaa |
19821904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19842221 - 19842125
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
|||||| || ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19842221 |
cacattccggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaaccacccctcgaa |
19842125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36437646 - 36437742
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| |||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36437646 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcgatacaatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
36437742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2300914 - 2300815
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| |||||||| |||| ||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2300914 |
cacattacggaaaacttttctgtagaccacacttg---caacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
2300818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27997494 - 27997590
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
27997494 |
cacattacggaaaacttctctgtagaccacatttgatgctacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccatcgctcgaa |
27997590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28098864 - 28098960
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
28098864 |
cacattacggaaaacttctctgtagaccacatttgatgctacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccatcgctcgaa |
28098960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42109473 - 42109569
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||| | |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42109473 |
cacattacggaaaacttttttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaatcacccctcgaa |
42109569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20890776 - 20890699
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatat |
78 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| ||||||||||||||||| |
|
|
| T |
20890776 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatat |
20890699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 48; E-Value: 6e-19
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 1916822 - 1916901
Alignment:
| Q |
11 |
aaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacc |
90 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| | ||||||||| ||| |||||||||||||||| ||||||||||| |
|
|
| T |
1916822 |
aaaacttctatgtagaccacatttgatgcaacattggtatcatcgttgtcctcgtcattaatcaataactttaaaccacc |
1916901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23455698 - 23455797
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||| ||||||||||| |||||||||| ||||| |||| | | | || || ||||| |||||||| ||||||||| |||| |||||| |
|
|
| T |
23455698 |
cacattacggaaaaattctctgtagactacatttgatgtcacatcagtatcttggccatcctcatcattgatcaatatctttaaaccatcccttgaagta |
23455797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 1e-44; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22729890 - 22729992
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22729890 |
cacattacgtaaaacttttctgtagaccacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
22729989 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
22729990 |
acc |
22729992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 406167 - 406269
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
406167 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccatccctcgaagta |
406266 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
406267 |
acc |
406269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14994483 - 14994585
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
14994483 |
cacattacggaaaacttctctgtagaccatatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatattttaaaaccacctctcgaagta |
14994582 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
14994583 |
acc |
14994585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 78; E-Value: 7e-37
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19961724 - 19961623
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19961724 |
cacattacagaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgatgta |
19961625 |
T |
|
| Q |
101 |
ac |
102 |
Q |
| |
|
|| |
|
|
| T |
19961624 |
ac |
19961623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41376424 - 41376526
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41376424 |
cacattacggaaaacttttctgtagatcacacttgatgcaacatcggcatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
41376523 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
41376524 |
acc |
41376526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24011859 - 24011955
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24011859 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgtcgtcctcgtcattaatcaatatttttaaatcacccctcgaa |
24011955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37983450 - 37983546
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37983450 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaatcacccctcgaa |
37983546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23827855 - 23827762
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23827855 |
cacattacggaaaacttctctgtagaccacatttgatgca---------tcatcgtcgtcgttgtcattaatcaatatttttaaaccacccctcgaagta |
23827765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18266005 - 18266104
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| ||| |||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18266005 |
cacattacggaaaacttctctgtagaccacacttg---caacatcggtatcatcgccgctgtcgtcattaatcaatatctttaaaccacccctcgaagta |
18266101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18275018 - 18275117
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| ||| |||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18275018 |
cacattacggaaaacttctctgtagaccacacttg---caacatcggtatcatcgccgctgtcgtcattaatcaatatctttaaaccacccctcgaagta |
18275114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 1e-44; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32038538 - 32038436
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32038538 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
32038439 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
32038438 |
acc |
32038436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7893852 - 7893750
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7893852 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
7893753 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
7893752 |
acc |
7893750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16719995 - 16719893
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16719995 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
16719896 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
16719895 |
acc |
16719893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22007075 - 22006973
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22007075 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
22006976 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
22006975 |
acc |
22006973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17697010 - 17696908
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17697010 |
cacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
17696911 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
17696910 |
acc |
17696908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26168939 - 26168837
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26168939 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcagcaatcaatatttttaaaccacccctcgaagta |
26168840 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
26168839 |
acc |
26168837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27716039 - 27715937
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27716039 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatatttaaaccacccctcgaagta |
27715940 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
27715939 |
acc |
27715937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45115925 - 45115823
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45115925 |
cacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
45115826 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
45115825 |
acc |
45115823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7888962 - 7888860
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7888962 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcaccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
7888863 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
7888862 |
acc |
7888860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32660319 - 32660220
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32660319 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcgtcgtcgt---cgtcattaatcaatatttttaaactacccctcgaagta |
32660223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29956572 - 29956470
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||| ||||| ||||||||||||||| ||||| |
|
|
| T |
29956572 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaattaatatctttaaaccacccctcaaagta |
29956473 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
29956472 |
acc |
29956470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 68; E-Value: 7e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 46909443 - 46909348
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcga |
96 |
Q |
| |
|
||||||| | ||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
46909443 |
cacattatggaaaacttctatgtagaccacatttgatgcaacatcggtatcatcgtcgtcctcgtcattaatcaatatctttaaaccacccctcga |
46909348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13398417 - 13398513
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| |||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13398417 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcgatacaatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
13398513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5093665 - 5093569
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||||||||| || | |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5093665 |
cacattacagaaaacttctttgtagaccacatttgatgcaacatcgataaaatagacgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
5093569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31100233 - 31100133
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| |||||||| |||||||| | |||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
31100233 |
cacattacggaaaacttatctgtagaccacatttg-tccaacatcggtatcatcg-cgtcctcgtcattaatcaatatctttaaaccacccctcaaagta |
31100136 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
31100135 |
acc |
31100133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 91; Significance: 1e-44; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30388033 - 30388135
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30388033 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcgtcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
30388132 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
30388133 |
acc |
30388135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28389499 - 28389397
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
28389499 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgtcgtcgtcgtcattaatcaatattttaaaaccacccctcgaagta |
28389400 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
28389399 |
acc |
28389397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41859876 - 41859978
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41859876 |
cacattacgaaaaacttcactgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
41859975 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
41859976 |
acc |
41859978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 52682829 - 52682727
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
52682829 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
52682730 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
52682729 |
acc |
52682727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19515231 - 19515333
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19515231 |
cacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
19515330 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
19515331 |
acc |
19515333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21581621 - 21581723
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21581621 |
cacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
21581720 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
21581721 |
acc |
21581723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29359217 - 29359309
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccct |
93 |
Q |
| |
|
||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29359217 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccct |
29359309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21382746 - 21382644
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21382746 |
cacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatcactgtcgtcgtcattaatcaatatttttaaaccagccctcgaagta |
21382647 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
21382646 |
acc |
21382644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42347835 - 42347739
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
42347835 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgtcgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
42347739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31448462 - 31448555
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctc |
94 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
31448462 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaatcacccctc |
31448555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 53288405 - 53288309
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
53288405 |
cacattacagaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
53288309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16909152 - 16909059
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16909152 |
cacattacggaaaacttctctgtagaccacatttgatgca---------tcgtcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
16909062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 36895658 - 36895755
Alignment:
| Q |
2 |
acattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagt |
99 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| | ||| |||| | | |||| || ||||| |||||||| ||||||||| |||| ||||| |
|
|
| T |
36895658 |
acattacggaaaacttctctgtagaccacatttgatgtcatatcagtatcttggccgtcctcatcattgatcaatatctttaaaccatcccttgaagt |
36895755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 41944038 - 41944113
Alignment:
| Q |
28 |
cacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
||||||||||| |||||| |||| ||| |||| || ||||| |||||||| ||||||||| |||| ||||||||| |
|
|
| T |
41944038 |
cacatttgatgtcacatcggtatcttcgccgtcctcatcattgatcaatatctttaaaccatcccttgaagtaacc |
41944113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0642 (Bit Score: 87; Significance: 3e-42; HSPs: 1)
Name: scaffold0642
Description:
Target: scaffold0642; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3494 - 3392
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3494 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
3395 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
3394 |
acc |
3392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 87; Significance: 3e-42; HSPs: 1)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13406 - 13304
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13406 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
13307 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
13306 |
acc |
13304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 87; Significance: 3e-42; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45672 - 45570
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
45672 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
45573 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
45572 |
acc |
45570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 87; Significance: 3e-42; HSPs: 1)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25575 - 25677
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25575 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
25674 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
25675 |
acc |
25677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 87; Significance: 3e-42; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 854684 - 854582
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
854684 |
cacattacggaaaacttctctgtagaccacatttgatgcaacattgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
854585 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
854584 |
acc |
854582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12260936 - 12260834
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12260936 |
cacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
12260837 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
12260836 |
acc |
12260834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36087593 - 36087695
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36087593 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccatcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
36087692 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
36087693 |
acc |
36087695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49562412 - 49562514
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
49562412 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgtcgtcgtcgttattaatcaatatttttaaaccaccccttgaagta |
49562511 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
49562512 |
acc |
49562514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18198812 - 18198713
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18198812 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
18198713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 35716415 - 35716316
Alignment:
| Q |
4 |
attacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35716415 |
attacggaaaacttctctgtaaaccacatttgatgcaacatcgatattatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
35716316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4594221 - 4594119
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4594221 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgtcgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
4594122 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
4594121 |
acc |
4594119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26951616 - 26951514
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26951616 |
cacattacggaaaacttctctgtagaccacatttgatgcaatatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
26951517 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
26951516 |
acc |
26951514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38655926 - 38656028
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
38655926 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcagcaatcaatatttttaaaccacccctcgaagta |
38656025 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
38656026 |
acc |
38656028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26947957 - 26947855
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26947957 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
26947858 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
26947857 |
acc |
26947855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36091431 - 36091533
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
36091431 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaacacctctcgaagta |
36091530 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
36091531 |
acc |
36091533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36947160 - 36947262
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36947160 |
cacattacggaaaaattctctgtagaccacatttgatgcaacatcggtatcatcgtcgtcctcgtcattaatcaatatctttaaaccacccctcgaagta |
36947259 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
36947260 |
acc |
36947262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13454886 - 13454988
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
13454886 |
cacattacgaaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcatcattaatcaatatctttaaaccacccctcaaagta |
13454985 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
13454986 |
acc |
13454988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12825309 - 12825207
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||| | |||| || ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12825309 |
cacattatggaaaatttatctgtagatcacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
12825210 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
12825209 |
acc |
12825207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11826585 - 11826489
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11826585 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaaccacccctcgaa |
11826489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16651529 - 16651427
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
16651529 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcaccgtcgtcatcattaatcaatatctttaaaccacccctcaaagta |
16651430 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
16651429 |
acc |
16651427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31487333 - 31487231
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31487333 |
cacattaccgaaaacttctcaatagaccacatttgatgcaacatcggtatcatcgctgtcgtcgtcattaatcaatatttttaaaccagccctcgaagta |
31487234 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
31487233 |
acc |
31487231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 52418799 - 52418900
Alignment:
| Q |
2 |
acattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaa |
101 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||| || ||||| |||| ||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
52418799 |
acattacagaaaacttctctgtagaccacatttgatgcaacatcggtaccatcgccgtcctcgtcattaatcaatatctttaaaacacccctcgaagtaa |
52418898 |
T |
|
| Q |
102 |
cc |
103 |
Q |
| |
|
|| |
|
|
| T |
52418899 |
cc |
52418900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33003888 - 33003984
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| || |||||||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33003888 |
cacattacggaaaacttctttgtagaccatatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaatcacccctcgaa |
33003984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 859915 - 859838
Alignment:
| Q |
21 |
tgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatca--atatttttaaaccacccctcga |
96 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||| |||| ||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
859915 |
tgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatatctttaaaccacccctcga |
859838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18256342 - 18256240
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||| | |||||||||||||||| ||||||||||| ||||| |||| | | |||| |||||||| ||||| || ||||||||| |||| |||||| |
|
|
| T |
18256342 |
cacattatggaaaacttctctgtagaccacatttgatgtcacatcagtatcttggccgtcctcgtcattgatcaacatctttaaaccatcccttgaagta |
18256243 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
18256242 |
acc |
18256240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 18201445 - 18201366
Alignment:
| Q |
24 |
agatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
||||||||||||||| |||||| |||| ||| |||| || ||||| |||||||| ||||||||| || | ||||||||| |
|
|
| T |
18201445 |
agatcacatttgatgtcacatcggtatcttcgccgtcctcatcattgatcaatatctttaaaccatcctttgaagtaacc |
18201366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53521068 - 53521105
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatg |
38 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
53521068 |
cacattaccaaaaacttctctgtagaccacatttgatg |
53521105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 36006293 - 36006257
Alignment:
| Q |
2 |
acattacgaaaaacttctctgtagatcacatttgatg |
38 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
36006293 |
acattacggaaaacttctctgtagaccacatttgatg |
36006257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 87; Significance: 3e-42; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2045252 - 2045354
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2045252 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
2045351 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
2045352 |
acc |
2045354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45503536 - 45503638
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45503536 |
cacattacggaaaacttctccgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
45503635 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
45503636 |
acc |
45503638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29245550 - 29245448
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29245550 |
cacattacggaaaacttctctgtagatcacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaagta |
29245451 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
29245450 |
acc |
29245448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42496692 - 42496590
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42496692 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
42496593 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
42496592 |
acc |
42496590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2047503 - 2047605
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2047503 |
cacattacggaaaacttctctgtagatcacacttgatgcaacattggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
2047602 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
2047603 |
acc |
2047605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7480608 - 7480506
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7480608 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
7480509 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
7480508 |
acc |
7480506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9533984 - 9533882
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9533984 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
9533885 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
9533884 |
acc |
9533882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13926305 - 13926407
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13926305 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtatcatcaccgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
13926404 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
13926405 |
acc |
13926407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36866914 - 36867016
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36866914 |
cacattacggaaaacttctctgtagatcacacttgatgcaacattggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
36867013 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
36867014 |
acc |
36867016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 78; E-Value: 7e-37
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50708971 - 50708870
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
50708971 |
cacattacagaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatttttaaaccacccctcgatgta |
50708872 |
T |
|
| Q |
101 |
ac |
102 |
Q |
| |
|
|| |
|
|
| T |
50708871 |
ac |
50708870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39513259 - 39513361
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39513259 |
cacattacggaaaacttatctgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaagta |
39513358 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
39513359 |
acc |
39513361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38210997 - 38211098
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38210997 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccacccctcgaagta |
38211096 |
T |
|
| Q |
101 |
ac |
102 |
Q |
| |
|
|| |
|
|
| T |
38211097 |
ac |
38211098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45501291 - 45501386
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcga |
96 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45501291 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatatttaaaccacccctcga |
45501386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 48651114 - 48651012
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
48651114 |
cacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatctctgtcgtcgtcattaatcaatatttttaaaccagccctcaaagta |
48651015 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
48651014 |
acc |
48651012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49787360 - 49787462
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||| | | ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49787360 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcattgccaccgtcgtcattaatcaatatctttaaaccacccctcgaagta |
49787459 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
49787460 |
acc |
49787462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48960822 - 48960726
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||| |
|
|
| T |
48960822 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgtcgtcctcgtcattaatcaatatttttaaatcacctctcgaa |
48960726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 26211749 - 26211648
Alignment:
| Q |
2 |
acattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaa |
101 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
26211749 |
acattacggaaaacttctttgtagaccacatttgatgcaacatcagtattatcgtcgtcctcatcattaatcaatatcttttaaccacccctcgaagtaa |
26211650 |
T |
|
| Q |
102 |
cc |
103 |
Q |
| |
|
|| |
|
|
| T |
26211649 |
cc |
26211648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15691568 - 15691472
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||| | ||||||||||||||||| | ||| |||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15691568 |
cacattacggaaaacttctttgtacaccacatttgatgcaacattggtataatcgccgtcctcgtcattaatcaatatttttaaaccacccctcgaa |
15691472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 23086202 - 23086300
Alignment:
| Q |
5 |
ttacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||| ||||| |||| | |||||| || ||||| |||||||| ||||||||| |||| ||||||||| |
|
|
| T |
23086202 |
ttacgaaaaacttctctgtaaaccacatttgatgtcacatcagtatcttggtcgtcctcatcattgatcaatatctttaaaccatcccttgaagtaacc |
23086300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37891538 - 37891640
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||| || ||||||||| |||||| ||||||||||| ||||| |||| | | |||| |||||||| ||||| || ||||||||| |||| |||||| |
|
|
| T |
37891538 |
cacattgcggaaaacttctttgtagaccacatttgatgtcacatcagtatcttggccgtcctcgtcattgatcaacatctttaaaccatcccttgaagta |
37891637 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
37891638 |
acc |
37891640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 35593896 - 35593971
Alignment:
| Q |
28 |
cacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
||||||||||| |||||| |||| ||| |||| || ||||| |||||||| ||||||||| |||| ||||||||| |
|
|
| T |
35593896 |
cacatttgatgtcacatcggtatcttcgccgtcctcatcattgatcaatatctttaaaccatcccttgaagtaacc |
35593971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21056910 - 21056874
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgat |
37 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
21056910 |
cacattacggaaaacttctctgtagagcacatttgat |
21056874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 83; Significance: 7e-40; HSPs: 3)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40448 - 40550
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40448 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
40547 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
40548 |
acc |
40550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097; HSP #2
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49098 - 49200
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
49098 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgctgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
49197 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
49198 |
acc |
49200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097; HSP #3
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 51920 - 52022
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
51920 |
cacattacggaaaacttctctatagaccacatttgatgcaacatcgatatcatcgctgtcgtcgtcaataatcaatatttttaaaccacccctcgaagta |
52019 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
52020 |
acc |
52022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 83; Significance: 7e-40; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32674993 - 32674891
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||| | |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
32674993 |
cacattatggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgccgtcgtcgtcattaatcaatatttttaaaccacctctcgaagta |
32674894 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
32674893 |
acc |
32674891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12655315 - 12655213
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12655315 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
12655216 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
12655215 |
acc |
12655213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20105097 - 20105199
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20105097 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
20105196 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
20105197 |
acc |
20105199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23184100 - 23183998
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23184100 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
23184001 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
23184000 |
acc |
23183998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23188367 - 23188265
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23188367 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
23188268 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
23188267 |
acc |
23188265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34761361 - 34761259
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34761361 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
34761262 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
34761261 |
acc |
34761259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39878195 - 39878093
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39878195 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
39878096 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
39878095 |
acc |
39878093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3607942 - 3608044
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
3607942 |
cacattacgaaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcatcattaatcaatatctttaaaccacccctcaaagta |
3608041 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
3608042 |
acc |
3608044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30090357 - 30090459
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
30090357 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcaccgtcgtcatcattaatcaatatctttaaaccacccctcaaagta |
30090456 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
30090457 |
acc |
30090459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16678768 - 16678870
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||| |||| | |||||| || ||||| |||||||| ||||||||| |||| |||||| |
|
|
| T |
16678768 |
cacattacgaaaaacttctctgtagaccacatttgatgtcacatcagtatcttagtcgtcctcatcattgatcaatatctttaaaccatcccttgaagta |
16678867 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
16678868 |
acc |
16678870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38095514 - 38095616
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| ||||| |||| | | ||| || ||||| ||||| || ||||||||| |||| |||||| |
|
|
| T |
38095514 |
cacattacggaaaacttctctgtagaccacatttgatgtcacatcagtatcttggctgtcctcatcattgatcaacatctttaaaccatcccttgaagta |
38095613 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
38095614 |
acc |
38095616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37609778 - 37609741
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatg |
38 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
37609778 |
cacattacggaaaacttctctgtagaccacatttgatg |
37609741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 79; Significance: 2e-37; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33045784 - 33045886
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33045784 |
cacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgccgtcgtcgtcattaatcaatatctttaaaccacccctcgaagta |
33045883 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
33045884 |
acc |
33045886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2281038 - 2280939
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2281038 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgtcgt---cgtcattaatcaatatttttaaaccacccctcgaagta |
2280942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29372071 - 29372167
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
29372071 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgtcgtcctcgtcattaatcaatatttttatatcacccctcgaa |
29372167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29369516 - 29369609
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctc |
94 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
29369516 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgccgtcctcgtcattaatcaatatttttaaatcacccctc |
29369609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24458754 - 24458658
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||| | ||||||||||||||||| | ||| |||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24458754 |
cacattacggaaaacttctttgtacaccacatttgatgcaacattggtataatcgccgtcctcgtcattaatcaatatttttaaaccacccctcgaa |
24458658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33004775 - 33004871
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaa |
97 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| ||| || | |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33004775 |
cacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataattgccgtcctcgtcattaatcaatatctttaaaccacccctcgaa |
33004871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25971043 - 25971145
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||| ||||| |||| | |||||| |||||||| ||||| || ||||||||| |||| |||||| |
|
|
| T |
25971043 |
cacattacggaaaacttctctctagaccacatttgatgtcacatcagtatcttggtcgtcctcgtcattgatcaacatctttaaaccatcccttgaagta |
25971142 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
25971143 |
acc |
25971145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25975483 - 25975585
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagta |
100 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||| ||||| |||| | |||||| |||||||| ||||| || ||||||||| |||| |||||| |
|
|
| T |
25975483 |
cacattacggaaaacttctctctagaccacatttgatgtcacatcagtatcttggtcgtcctcgtcattgatcaacatctttaaaccatcccttgaagta |
25975582 |
T |
|
| Q |
101 |
acc |
103 |
Q |
| |
|
||| |
|
|
| T |
25975583 |
acc |
25975585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 3591297 - 3591218
Alignment:
| Q |
24 |
agatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcgaagtaacc |
103 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||| || ||||| |||||||| ||||||||| || | ||||||||| |
|
|
| T |
3591297 |
agatcacatttgatgtcacatcgatatcttcgccgtcctcatcattgatcaatatctttaaaccatcctttgaagtaacc |
3591218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0374 (Bit Score: 72; Significance: 3e-33; HSPs: 1)
Name: scaffold0374
Description:
Target: scaffold0374; HSP #1
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2066 - 1971
Alignment:
| Q |
1 |
cacattacgaaaaacttctctgtagatcacatttgatgcaacatcgatatcatcgtcgtcgtcgtcattaatcaatatttttaaaccacccctcga |
96 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2066 |
cacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgccgtcctcgtcattaatcaatatctttaaaccacccctcga |
1971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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