View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5842-12 (Length: 80)
Name: Solexa-NF5842-12
Description: NF5842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5842-12 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 62; Significance: 2e-28; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-28
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47636998 - 47637059
Alignment:
| Q |
19 |
tacttgatgaaaatttgagacaggcctggaaactttggaagaatggaacacccttggaattg |
80 |
Q |
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| T |
47636998 |
tacttgatgaaaatttgagacaggcctggaaactttggaagaatggaacacccttggaattg |
47637059 |
T |
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