View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5843-10 (Length: 132)

Name: Solexa-NF5843-10
Description: NF5843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5843-10
Solexa-NF5843-10
[»] scaffold0342 (2 HSPs)
scaffold0342 (1-132)||(2550-2681)
scaffold0342 (12-91)||(4066-4145)
[»] chr6 (36 HSPs)
chr6 (1-132)||(35011208-35011339)
chr6 (1-132)||(18578811-18578942)
chr6 (1-132)||(19627475-19627606)
chr6 (1-132)||(18004942-18005073)
chr6 (1-132)||(23975685-23975817)
chr6 (1-132)||(33316498-33316629)
chr6 (1-132)||(35017536-35017668)
chr6 (1-132)||(16827895-16828026)
chr6 (13-132)||(18775495-18775614)
chr6 (6-132)||(23151688-23151814)
chr6 (1-132)||(13623016-13623145)
chr6 (1-132)||(18843793-18843923)
chr6 (1-132)||(14628453-14628584)
chr6 (6-96)||(25173500-25173590)
chr6 (6-131)||(25646678-25646804)
chr6 (6-132)||(31626721-31626848)
chr6 (6-126)||(16104832-16104952)
chr6 (13-132)||(18128329-18128447)
chr6 (6-96)||(18740627-18740717)
chr6 (1-132)||(4988965-4989093)
chr6 (1-96)||(18835474-18835567)
chr6 (12-97)||(22428461-22428546)
chr6 (6-103)||(25746081-25746178)
chr6 (6-94)||(18422097-18422185)
chr6 (12-132)||(13016597-13016714)
chr6 (6-96)||(19985026-19985114)
chr6 (10-99)||(17787732-17787821)
chr6 (1-100)||(18397141-18397239)
chr6 (6-100)||(1553912-1554006)
chr6 (1-50)||(16235745-16235794)
chr6 (6-87)||(32896264-32896345)
chr6 (6-60)||(16889620-16889675)
chr6 (6-51)||(11214409-11214454)
chr6 (6-51)||(18088640-18088685)
chr6 (6-66)||(17344102-17344162)
chr6 (12-59)||(33323028-33323075)
[»] chr5 (40 HSPs)
chr5 (1-132)||(10780197-10780328)
chr5 (1-132)||(34937548-34937679)
chr5 (1-132)||(10284-10415)
chr5 (1-132)||(22885126-22885257)
chr5 (1-132)||(43445793-43445924)
chr5 (1-132)||(29192749-29192880)
chr5 (1-130)||(17473788-17473915)
chr5 (1-96)||(35793273-35793368)
chr5 (1-132)||(19497913-19498044)
chr5 (1-122)||(25211886-25212005)
chr5 (1-122)||(25276038-25276157)
chr5 (1-132)||(25944645-25944773)
chr5 (6-126)||(23986257-23986377)
chr5 (22-132)||(1171355-1171466)
chr5 (1-96)||(11340576-11340671)
chr5 (1-96)||(18780163-18780258)
chr5 (1-132)||(9732677-9732805)
chr5 (7-132)||(27185594-27185716)
chr5 (6-132)||(21392414-21392539)
chr5 (1-132)||(111068-111196)
chr5 (3-122)||(11579901-11580017)
chr5 (1-130)||(1221725-1221849)
chr5 (13-132)||(21661484-21661604)
chr5 (6-132)||(28257763-28257885)
chr5 (6-96)||(22368602-22368692)
chr5 (6-96)||(25424646-25424736)
chr5 (6-94)||(24185067-24185155)
chr5 (6-103)||(4863533-4863631)
chr5 (6-96)||(16534373-16534463)
chr5 (6-96)||(24470537-24470626)
chr5 (6-92)||(11338734-11338820)
chr5 (6-92)||(23510215-23510299)
chr5 (10-96)||(11213541-11213627)
chr5 (33-93)||(21647196-21647255)
chr5 (32-100)||(17907854-17907923)
chr5 (6-98)||(23453166-23453259)
chr5 (6-98)||(23460410-23460503)
chr5 (6-98)||(23464671-23464764)
chr5 (6-97)||(7726901-7726993)
chr5 (12-80)||(19403801-19403869)
[»] scaffold0158 (2 HSPs)
scaffold0158 (1-132)||(23017-23148)
scaffold0158 (1-93)||(16353-16445)
[»] chr7 (39 HSPs)
chr7 (1-132)||(7290885-7291016)
chr7 (1-132)||(14253155-14253286)
chr7 (1-132)||(16480921-16481052)
chr7 (1-132)||(369121-369251)
chr7 (1-132)||(2192691-2192821)
chr7 (1-132)||(15952944-15953073)
chr7 (6-132)||(15824263-15824389)
chr7 (6-132)||(44863425-44863552)
chr7 (1-132)||(18305726-18305854)
chr7 (12-132)||(141857-141977)
chr7 (1-132)||(7286413-7286545)
chr7 (6-102)||(47287958-47288054)
chr7 (8-132)||(26072022-26072147)
chr7 (8-132)||(26095809-26095934)
chr7 (1-96)||(16416486-16416581)
chr7 (6-120)||(12753154-12753267)
chr7 (1-120)||(13867984-13868103)
chr7 (1-89)||(2024670-2024757)
chr7 (6-132)||(113063-113186)
chr7 (6-103)||(3893363-3893459)
chr7 (6-94)||(16571983-16572071)
chr7 (6-94)||(16593591-16593679)
chr7 (6-92)||(3054964-3055049)
chr7 (6-132)||(11582737-11582858)
chr7 (7-94)||(122753-122838)
chr7 (13-132)||(12545692-12545813)
chr7 (7-96)||(16209958-16210045)
chr7 (6-96)||(32496381-32496469)
chr7 (6-100)||(15762369-15762463)
chr7 (10-132)||(13039011-13039128)
chr7 (6-98)||(49049648-49049741)
chr7 (6-66)||(1938587-1938647)
chr7 (6-100)||(45455505-45455599)
chr7 (6-89)||(15628986-15629069)
chr7 (4-66)||(11285328-11285391)
chr7 (6-60)||(12249907-12249961)
chr7 (6-50)||(15914246-15914290)
chr7 (6-66)||(18255664-18255724)
chr7 (6-46)||(2435852-2435892)
[»] chr4 (40 HSPs)
chr4 (4-132)||(18166854-18166982)
chr4 (1-132)||(8372584-8372715)
chr4 (1-132)||(15274555-15274686)
chr4 (1-132)||(19699498-19699629)
chr4 (1-132)||(19710083-19710214)
chr4 (11-132)||(7134395-7134516)
chr4 (1-131)||(26678156-26678284)
chr4 (2-132)||(34393363-34393495)
chr4 (1-96)||(18246155-18246250)
chr4 (6-103)||(12838113-12838210)
chr4 (1-96)||(15211492-15211587)
chr4 (6-123)||(53909651-53909768)
chr4 (1-96)||(19998494-19998589)
chr4 (1-132)||(9293689-9293817)
chr4 (1-132)||(10642351-10642479)
chr4 (1-132)||(18294638-18294769)
chr4 (22-120)||(21961344-21961442)
chr4 (1-132)||(22356509-22356639)
chr4 (1-132)||(16520778-16520907)
chr4 (22-103)||(8874267-8874348)
chr4 (12-103)||(44345045-44345136)
chr4 (6-100)||(45460818-45460912)
chr4 (13-91)||(53706761-53706839)
chr4 (22-91)||(33738475-33738544)
chr4 (1-98)||(55378691-55378787)
chr4 (6-115)||(5684716-5684825)
chr4 (6-132)||(16366520-16366642)
chr4 (6-94)||(20813820-20813908)
chr4 (6-95)||(109730-109817)
chr4 (6-91)||(12901565-12901649)
chr4 (10-132)||(13244592-13244709)
chr4 (6-94)||(30236341-30236429)
chr4 (6-132)||(47355491-47355614)
chr4 (6-98)||(13811483-13811576)
chr4 (6-87)||(44054150-44054231)
chr4 (6-132)||(54120092-54120213)
chr4 (1-44)||(17150228-17150271)
chr4 (1-66)||(43283250-43283316)
chr4 (6-80)||(18496278-18496352)
chr4 (6-46)||(15288885-15288925)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-132)||(270306-270437)
scaffold0009 (6-132)||(236394-236520)
[»] chr8 (39 HSPs)
chr8 (1-132)||(6776314-6776445)
chr8 (1-132)||(13664635-13664766)
chr8 (1-132)||(13723910-13724041)
chr8 (1-132)||(18610405-18610536)
chr8 (1-132)||(22909427-22909558)
chr8 (1-132)||(17343457-17343586)
chr8 (1-132)||(22008440-22008570)
chr8 (1-132)||(23509045-23509176)
chr8 (6-132)||(25120727-25120853)
chr8 (1-132)||(645866-645993)
chr8 (6-132)||(43375388-43375511)
chr8 (1-132)||(831601-831728)
chr8 (1-122)||(24108561-24108680)
chr8 (1-132)||(24719408-24719537)
chr8 (6-132)||(41243930-41244056)
chr8 (1-96)||(3433646-3433741)
chr8 (12-131)||(37605271-37605390)
chr8 (1-132)||(269928-270054)
chr8 (1-96)||(23631101-23631196)
chr8 (1-96)||(28835957-28836052)
chr8 (4-132)||(16041462-16041589)
chr8 (4-132)||(16043138-16043265)
chr8 (1-132)||(41509012-41509145)
chr8 (6-98)||(20655869-20655961)
chr8 (4-103)||(19994999-19995098)
chr8 (6-132)||(22323310-22323432)
chr8 (1-131)||(24930906-24931031)
chr8 (6-91)||(29758541-29758624)
chr8 (6-95)||(16204109-16204197)
chr8 (6-103)||(20479875-20479971)
chr8 (6-131)||(24387491-24387611)
chr8 (6-87)||(28543133-28543213)
chr8 (9-100)||(16416522-16416612)
chr8 (6-78)||(17731333-17731405)
chr8 (6-66)||(21695881-21695941)
chr8 (13-97)||(39448573-39448657)
chr8 (7-97)||(22737759-22737851)
chr8 (6-89)||(38531864-38531948)
chr8 (6-46)||(24547445-24547485)
[»] chr3 (61 HSPs)
chr3 (1-132)||(30140961-30141092)
chr3 (1-132)||(51160227-51160358)
chr3 (4-132)||(54045595-54045723)
chr3 (1-132)||(12796700-12796832)
chr3 (1-132)||(16819020-16819149)
chr3 (4-132)||(19944785-19944913)
chr3 (1-132)||(11812778-11812909)
chr3 (6-132)||(6148614-6148741)
chr3 (1-96)||(18908656-18908751)
chr3 (1-96)||(22273011-22273106)
chr3 (11-122)||(38166200-38166311)
chr3 (13-132)||(319375-319497)
chr3 (6-132)||(30204678-30204804)
chr3 (1-132)||(7851660-7851792)
chr3 (6-132)||(25057017-25057140)
chr3 (6-132)||(50113883-50114009)
chr3 (22-132)||(18737972-18738082)
chr3 (17-132)||(17098906-17099022)
chr3 (1-132)||(17936432-17936564)
chr3 (13-115)||(12351618-12351720)
chr3 (6-100)||(14296712-14296805)
chr3 (6-100)||(14302339-14302432)
chr3 (9-103)||(13815841-13815935)
chr3 (11-100)||(17536847-17536936)
chr3 (6-132)||(19230300-19230421)
chr3 (13-132)||(23490757-23490873)
chr3 (11-103)||(16183866-16183958)
chr3 (6-94)||(22146075-22146163)
chr3 (6-100)||(11062944-11063038)
chr3 (6-100)||(11199339-11199433)
chr3 (6-94)||(35121903-35121991)
chr3 (6-92)||(10736806-10736890)
chr3 (6-96)||(2451370-2451460)
chr3 (6-100)||(14523202-14523296)
chr3 (6-95)||(14287305-14287394)
chr3 (6-132)||(19572589-19572711)
chr3 (6-85)||(2048305-2048383)
chr3 (6-120)||(17958209-17958321)
chr3 (34-96)||(49230256-49230318)
chr3 (12-100)||(53900388-53900475)
chr3 (10-95)||(45581087-45581170)
chr3 (4-132)||(33340018-33340140)
chr3 (6-95)||(19262838-19262925)
chr3 (6-94)||(47786667-47786753)
chr3 (32-100)||(54686530-54686599)
chr3 (6-97)||(39654145-39654237)
chr3 (33-96)||(15861043-15861104)
chr3 (1-51)||(12490645-12490695)
chr3 (6-95)||(14061039-14061128)
chr3 (32-100)||(9304771-9304840)
chr3 (6-83)||(12563338-12563415)
chr3 (6-66)||(17137681-17137742)
chr3 (6-65)||(15548810-15548870)
chr3 (6-66)||(15940300-15940360)
chr3 (6-58)||(55443714-55443766)
chr3 (9-66)||(8630042-8630100)
chr3 (6-80)||(40937925-40937999)
chr3 (6-43)||(2045576-2045613)
chr3 (1-50)||(11381059-11381108)
chr3 (6-59)||(11884049-11884102)
chr3 (6-51)||(14846495-14846540)
[»] chr1 (29 HSPs)
chr1 (1-132)||(20252319-20252450)
chr1 (6-132)||(22408053-22408180)
chr1 (6-132)||(5676427-5676553)
chr1 (12-132)||(41217532-41217654)
chr1 (1-132)||(15863403-15863531)
chr1 (6-96)||(17146802-17146892)
chr1 (1-132)||(22352262-22352390)
chr1 (4-132)||(22364923-22365048)
chr1 (13-100)||(21716419-21716506)
chr1 (6-103)||(35053123-35053220)
chr1 (32-132)||(2422892-2422989)
chr1 (12-94)||(35524280-35524362)
chr1 (6-132)||(21857735-21857856)
chr1 (1-74)||(22080167-22080240)
chr1 (12-103)||(9786236-9786327)
chr1 (6-121)||(20895590-20895705)
chr1 (12-96)||(18505634-18505717)
chr1 (10-132)||(37846263-37846380)
chr1 (6-132)||(20443988-20444108)
chr1 (6-132)||(20529728-20529848)
chr1 (88-132)||(22250861-22250905)
chr1 (6-66)||(51658213-51658273)
chr1 (6-59)||(44036756-44036809)
chr1 (6-89)||(20956820-20956904)
chr1 (6-59)||(22837224-22837278)
chr1 (6-59)||(22837427-22837481)
chr1 (1-42)||(24498422-24498463)
chr1 (6-46)||(35935478-35935518)
chr1 (8-59)||(36358138-36358190)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-132)||(4723-4854)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-132)||(49563-49694)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-132)||(156268-156398)
scaffold0023 (1-132)||(86044-86172)
scaffold0023 (6-72)||(92234-92300)
[»] chr2 (37 HSPs)
chr2 (1-132)||(21140116-21140247)
chr2 (1-132)||(42180294-42180425)
chr2 (1-132)||(21276427-21276558)
chr2 (1-129)||(12638082-12638210)
chr2 (1-96)||(3801234-3801329)
chr2 (1-96)||(19888848-19888943)
chr2 (1-132)||(24966402-24966530)
chr2 (1-96)||(34822292-34822387)
chr2 (6-130)||(36892521-36892646)
chr2 (1-96)||(38706921-38707016)
chr2 (6-96)||(8941694-8941784)
chr2 (10-132)||(25877777-25877896)
chr2 (1-129)||(12643900-12644023)
chr2 (6-96)||(25210875-25210965)
chr2 (14-103)||(4450092-4450181)
chr2 (9-94)||(6877706-6877791)
chr2 (6-132)||(8886432-8886553)
chr2 (12-100)||(25600161-25600249)
chr2 (7-100)||(28972255-28972347)
chr2 (7-132)||(9654693-9654809)
chr2 (6-94)||(22282379-22282466)
chr2 (6-94)||(22273146-22273233)
chr2 (6-98)||(15631613-15631705)
chr2 (12-100)||(22691834-22691922)
chr2 (12-100)||(22696481-22696569)
chr2 (11-92)||(20629257-20629336)
chr2 (23-100)||(269421-269498)
chr2 (8-95)||(460816-460901)
chr2 (6-66)||(23806442-23806502)
chr2 (6-91)||(43644829-43644912)
chr2 (12-97)||(22654327-22654412)
chr2 (7-98)||(7319701-7319793)
chr2 (12-126)||(22861783-22861893)
chr2 (6-77)||(22581805-22581876)
chr2 (6-59)||(23823315-23823369)
chr2 (6-59)||(23825259-23825313)
chr2 (1-97)||(24089201-24089298)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-132)||(26428-26558)
scaffold0138 (14-132)||(15166-15281)
[»] scaffold0191 (1 HSPs)
scaffold0191 (1-132)||(578-706)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-132)||(30627-30759)
scaffold0049 (6-66)||(44406-44466)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-132)||(29615-29745)
[»] scaffold0359 (1 HSPs)
scaffold0359 (6-132)||(13632-13758)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-132)||(31015-31145)
[»] scaffold0021 (3 HSPs)
scaffold0021 (6-132)||(138565-138691)
scaffold0021 (12-132)||(76577-76694)
scaffold0021 (6-66)||(9858-9918)
[»] scaffold0011 (5 HSPs)
scaffold0011 (6-132)||(256719-256845)
scaffold0011 (12-132)||(72214-72329)
scaffold0011 (12-132)||(76595-76710)
scaffold0011 (13-132)||(192757-192871)
scaffold0011 (10-132)||(125195-125312)
[»] scaffold0253 (2 HSPs)
scaffold0253 (1-132)||(14826-14956)
scaffold0253 (3-96)||(4047-4141)
[»] scaffold0116 (1 HSPs)
scaffold0116 (2-123)||(27928-28049)
[»] scaffold2147 (1 HSPs)
scaffold2147 (12-132)||(523-643)
[»] scaffold0226 (1 HSPs)
scaffold0226 (1-96)||(15167-15262)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-100)||(90942-91041)
[»] scaffold0315 (1 HSPs)
scaffold0315 (1-132)||(16747-16876)
[»] scaffold0269 (2 HSPs)
scaffold0269 (1-132)||(3033-3164)
scaffold0269 (1-132)||(258-392)
[»] scaffold0184 (1 HSPs)
scaffold0184 (6-100)||(33377-33471)
[»] scaffold0078 (1 HSPs)
scaffold0078 (6-100)||(39373-39467)
[»] scaffold0673 (1 HSPs)
scaffold0673 (6-103)||(3935-4032)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-132)||(21718-21834)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-96)||(781-876)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-132)||(10015-10145)
[»] scaffold0102 (1 HSPs)
scaffold0102 (6-132)||(37742-37869)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-96)||(5198-5293)
[»] scaffold0130 (1 HSPs)
scaffold0130 (2-96)||(31098-31192)
[»] scaffold0068 (1 HSPs)
scaffold0068 (6-120)||(59847-59960)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-132)||(27145-27274)
scaffold0026 (6-66)||(106259-106319)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-122)||(77575-77696)
[»] scaffold0234 (1 HSPs)
scaffold0234 (6-132)||(19384-19507)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-96)||(376-471)
[»] scaffold0383 (2 HSPs)
scaffold0383 (1-96)||(305-400)
scaffold0383 (1-103)||(5316-5417)
[»] scaffold0083 (1 HSPs)
scaffold0083 (12-103)||(12476-12567)
[»] scaffold0240 (1 HSPs)
scaffold0240 (6-132)||(5827-5953)
[»] scaffold0407 (2 HSPs)
scaffold0407 (6-121)||(22-137)
scaffold0407 (6-121)||(6486-6601)
[»] scaffold0037 (2 HSPs)
scaffold0037 (13-121)||(26566-26671)
scaffold0037 (13-120)||(66496-66603)
[»] scaffold0031 (1 HSPs)
scaffold0031 (6-120)||(68576-68690)
[»] scaffold0008 (3 HSPs)
scaffold0008 (7-132)||(20843-20969)
scaffold0008 (6-103)||(28432-28529)
scaffold0008 (6-132)||(129984-130104)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-132)||(2978-3106)
[»] scaffold0462 (1 HSPs)
scaffold0462 (16-132)||(4417-4534)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-132)||(21236-21367)
[»] scaffold0447 (1 HSPs)
scaffold0447 (1-103)||(2452-2553)
[»] scaffold0434 (1 HSPs)
scaffold0434 (6-100)||(2889-2983)
[»] scaffold0396 (2 HSPs)
scaffold0396 (6-100)||(14078-14172)
scaffold0396 (6-51)||(15708-15753)
[»] scaffold0022 (1 HSPs)
scaffold0022 (6-94)||(114080-114168)
[»] scaffold0692 (1 HSPs)
scaffold0692 (6-132)||(1205-1325)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-120)||(17712-17831)
[»] scaffold0106 (1 HSPs)
scaffold0106 (6-96)||(37609-37697)
[»] scaffold0032 (1 HSPs)
scaffold0032 (6-92)||(53913-53997)
[»] scaffold0195 (4 HSPs)
scaffold0195 (32-132)||(17534-17631)
scaffold0195 (32-132)||(19564-19661)
scaffold0195 (6-66)||(8497-8557)
scaffold0195 (6-66)||(13886-13946)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-91)||(56183-56273)
[»] scaffold0480 (1 HSPs)
scaffold0480 (6-103)||(7208-7305)
[»] scaffold0622 (1 HSPs)
scaffold0622 (41-132)||(7453-7546)
[»] scaffold0450 (1 HSPs)
scaffold0450 (6-100)||(4650-4743)
[»] scaffold0338 (1 HSPs)
scaffold0338 (12-100)||(6969-7057)
[»] scaffold0395 (1 HSPs)
scaffold0395 (13-100)||(13953-14040)
[»] scaffold1610 (1 HSPs)
scaffold1610 (6-132)||(11-132)
[»] scaffold1605 (1 HSPs)
scaffold1605 (6-132)||(1447-1568)
[»] scaffold0134 (1 HSPs)
scaffold0134 (6-132)||(25520-25644)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-97)||(144975-145060)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-132)||(249290-249412)
[»] scaffold1140 (1 HSPs)
scaffold1140 (13-132)||(1287-1401)
[»] scaffold0120 (1 HSPs)
scaffold0120 (6-100)||(26855-26949)
[»] scaffold0218 (1 HSPs)
scaffold0218 (12-96)||(7045-7127)
[»] scaffold0001 (1 HSPs)
scaffold0001 (7-87)||(75664-75744)
[»] scaffold0132 (1 HSPs)
scaffold0132 (6-131)||(40961-41082)
[»] scaffold0190 (1 HSPs)
scaffold0190 (10-78)||(8373-8441)
[»] scaffold0066 (2 HSPs)
scaffold0066 (32-100)||(44267-44336)
scaffold0066 (40-100)||(52444-52505)
[»] scaffold0808 (1 HSPs)
scaffold0808 (7-98)||(3320-3412)
[»] scaffold0610 (1 HSPs)
scaffold0610 (6-66)||(2469-2529)
[»] scaffold0121 (1 HSPs)
scaffold0121 (6-66)||(7281-7341)
[»] scaffold0095 (1 HSPs)
scaffold0095 (13-97)||(7416-7500)
[»] scaffold0498 (1 HSPs)
scaffold0498 (6-96)||(12539-12626)
[»] scaffold0302 (1 HSPs)
scaffold0302 (6-130)||(4100-4216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (22-100)||(31774-31850)
[»] scaffold0266 (1 HSPs)
scaffold0266 (12-96)||(5388-5469)
[»] scaffold0046 (1 HSPs)
scaffold0046 (6-51)||(21349-21394)
[»] scaffold0092 (1 HSPs)
scaffold0092 (12-83)||(1640-1711)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-94)||(197920-197978)
[»] scaffold0521 (1 HSPs)
scaffold0521 (13-59)||(6880-6926)
[»] scaffold0225 (1 HSPs)
scaffold0225 (6-51)||(28086-28131)
[»] scaffold0139 (1 HSPs)
scaffold0139 (6-51)||(17074-17119)
[»] scaffold0467 (1 HSPs)
scaffold0467 (6-94)||(11857-11944)
[»] scaffold0104 (1 HSPs)
scaffold0104 (12-51)||(51303-51342)
[»] scaffold0044 (1 HSPs)
scaffold0044 (56-103)||(94335-94382)


Alignment Details
Target: scaffold0342 (Bit Score: 116; Significance: 2e-59; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 2681 - 2550
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2681 cagatccactgggggtaagtattacattatcataatccaaataacatttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 2582  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||||||||||||||||||||    
T  2581 tcaaatcaatacttacatcaaaccccaatatc 2550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 4066 - 4145
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    ||||||| | |||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  4066 ggggtaattattacatcatcataatcaaaataacagttaacatgaataattcaatataaacatcatgtgcttgatcaata 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 2e-59; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35011339 - 35011208
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35011339 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 35011240  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  35011239 tcatatcaatacttacatcaaaccccaatatc 35011208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18578811 - 18578942
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18578811 cagatccactgggggtaagtattacatgatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcatatgatcaataataatattc 18578910  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  18578911 tcatatcaatacttacatcaaaccccaatatc 18578942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 19627475 - 19627606
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19627475 cagatccactgggggtaagtattacatcaacataatccaaataacagttaacattattatttcaatataaacatcatgcacttgatcaataataatattc 19627574  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  19627575 tcatatcaatacttacatcaaaccccaatatc 19627606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18005073 - 18004942
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  18005073 cagatccactgggtgtaagtattacattatcataatccaaataatagttaacatgaacatttcaatataaacatcatgcatttgatcaataataatattc 18004974  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  18004973 ccacatcaatacttacatcaaaccccaatatc 18004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23975685 - 23975817
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata-tt 99  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  23975685 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatataaacatcatgcatttgatcaataataaaattt 23975784  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || ||||||||||||||||||||||||||||    
T  23975785 cccacatcaatacttacatcaaaccccaatatc 23975817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 33316629 - 33316498
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  33316629 cagatccactgggggtaagtattacattatcataaaccaaatagcagttaacatggatatttcaatttaaacattatgcacttgatcaataataatattc 33316530  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  33316529 ccacatcaatacttacatcaaaccccaatatc 33316498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35017668 - 35017536
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  35017668 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatatcaatttaaacatcatgcacttgatcaataataatattc 35017569  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| |   ||||||||||| |||||||||||||    
T  35017568 tcatagatatacttacatcaaaaccccaatatc 35017536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16828026 - 16827895
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16828026 cagatccattggggttaagtattacattatcataatccaaataacagttaatatggatatttcaatttaaacatcatgcacttgatcaataataatattc 16827927  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     ||  |||||||||||||||||||||| ||||    
T  16827926 ccacgtcaatacttacatcaaaccccattatc 16827895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 18775495 - 18775614
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  |||  |||||    
T  18775495 gggtaagtattacatcattataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataaaattcaaaaaaaaatac 18775594  T
Q  113 ttacatcaaaccccaatatc 132  Q
    ||||||||||||||||||||    
T  18775595 ttacatcaaaccccaatatc 18775614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 23151688 - 23151814
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    |||||||||||| || |||||| || ||||||||||||||||||| |||| ||||||||||  |||||||||| |||||||||||||||||||||||| |    
T  23151688 ccactgggggtatgtattacatcatcataatccaaataacagttagcatggatatttcaattcaaacatcatgtacttgatcaataataatattctcata 23151787  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    |||||||||||||||||||||||||||    
T  23151788 tcaatacttacatcaaaccccaatatc 23151814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13623145 - 13623016
Alignment:
Q  1 cagatccactggggg-taagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatatt 99  Q
    ||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||   ||||||    
T  13623145 cagatccactggggggtaagtattacatcatcataatccaaataacagttaacatgaataactcaatataaacatcatgcacttgatcaat---aatatt 13623049  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || ||||||||||||||||||||||||||||    
T  13623048 cacatatcaatacttacatcaaaccccaatatc 13623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18843923 - 18843793
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |  || ||||||||||| |||||||||||||||||||    
T  18843923 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttta--attaacatcatgcatttgatcaataataatattc 18843826  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| ||  ||||||||||| |||||||||||||    
T  18843825 tcatatatatacttacatcaaaaccccaatatc 18843793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14628584 - 14628453
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| ||||||||  |||||||||||||||  |||||||||||||||||| ||||||||| | || |||||| |||||||||||    
T  14628584 cagatccactaggggtaagtattacattaagataatccaaataacatataacatgaatatttcaatttaaacatcacgtacatgatcattaataatattc 14628485  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  14628484 ccacatcaatacttacatcaaaccccaatatc 14628453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 25173500 - 25173590
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25173500 ccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 25173590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 25646804 - 25646678
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |    
T  25646804 ccactaggggtaagtattacatcatcataatccaaataacatttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattcacata 25646705  T
Q  106 tcaatacttacatc-aaaccccaatat 131  Q
       ||||||||||| ||||||||||||    
T  25646704 catatacttacatcaaaaccccaatat 25646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 31626721 - 31626848
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| |    
T  31626721 ccactaggggtaagtattacatcatcttaatccaaataacagttaacatggatatttcaatttaaacattatgcacttgatcaataataatattctcata 31626820  T
Q  106 tcaatacttacatcaa-accccaatatc 132  Q
       ||||||||||||| |||||||||||    
T  31626821 catatacttacatcaagaccccaatatc 31626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 16104832 - 16104952
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||||||| |||  ||||||||||||| | ||||||||||||||||||| || |    
T  16104832 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaataattcgttataaacatcatgtatttgatcaataataatattcacata 16104931  T
Q  106 tcaatacttacatcaaacccc 126  Q
     |||||||||||||| |||||    
T  16104932 acaatacttacatcatacccc 16104952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 18128329 - 18128447
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| | |||| || |   ||||    
T  18128329 gggtaagtattacatcatcataatccaaataacagttaacatgaatatttc-atctaaacatcatgcacttgatcaataattacattcccatacatatac 18128427  T
Q  113 ttacatcaaaccccaatatc 132  Q
    ||||||||||||||||||||    
T  18128428 ttacatcaaaccccaatatc 18128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 18740627 - 18740717
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  18740627 ccactggagataagtattacattatcataatccaaataacagttaacatgaatatttgaatataaacatcatgcatttgatcaataataat 18740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 4988965 - 4989093
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||  |||||| ||||||||||| ||||||||||||| ||||||||||||||||       
T  4988965 cagatccactgggggtaagtattacattatcataatacaaataacaaataacataaatatttcaatttaaacatcatgcaattgatcaataataata--- 4989061  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| ||||| |||||    
T  4989062 acacattaatacttacatcacaccccgatatc 4989093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18835567 - 18835474
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||    
T  18835567 cagacccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataat 18835474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 22428461 - 22428546
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  22428461 ggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgtacttgatcaacaataata 22428546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 25746178 - 25746081
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||||||||| |||||| || |||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||| ||||    
T  25746178 ccactgggggtaagtattacatcatcataatcaaaataacagttaacatgaataattcaacataaacatcatgcatttgatcaataatgatatcctca 25746081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 18422097 - 18422185
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18422097 ccactaggggtaagtattacatcatcataattcaaataacagttaacatgaatatttcaatttaaacatcattcacttgatcaataata 18422185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 13016714 - 13016597
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || |||||||||||| |||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||| |||   |||    
T  13016714 ggggtaagtattacatcatcataatccaaata-cagttaacatgaatatttcaatttaa-catcaagcatttgatcaataataatattctaaaaaatata 13016617  T
Q  112 cttacatcaaaccccaatatc 132  Q
    |||||||| ||||||||||||    
T  13016616 cttacatc-aaccccaatatc 13016597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 19985114 - 19985026
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||||||||||| |||||||||||||||    
T  19985114 ccactgggggtaagtattacattatcataatccaaataacagttatcatgaataattca--attaacatcatgcatttgatcaataataat 19985026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 17787732 - 17787821
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatatt 99  Q
    ||||||||||| |||||| || |||||| |||||| | |||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  17787732 tgggggtaagtattacatcatcataatcaaaataataattaacatgaataattcaatataaacatcatgcatttgatcaataatgatatt 17787821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18397141 - 18397239
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| |||||| || |||||||| |||||  ||||||||||||||||||| ||||| || || ||||| |||||||||||||||    
T  18397141 cagatccactgggg-taagtattacatcatcataatccacataacgtttaacatgaatatttcaatttaaacttcgtgtacttggtcaataataatattc 18397239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 1553912 - 1554006
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||| ||| |||||| |  |||||| ||||||||||||||||| |||||||||| ||||||||| | || ||||||||||||||||||    
T  1553912 ccactaggggtgagtattacatcaacataatcaaaataacagttaacatggatatttcaatttaaacatcacgtacatgatcaataataatattc 1554006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16235745 - 16235794
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagtta 50  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  16235745 cagatccactgggggtaagtattacattatcataatccaaataacagtta 16235794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 32896264 - 32896345
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc 87  Q
    ||||| ||| ||||| |||||| || ||||||||||||||||||| |||||||| || |||  |||||| ||| ||||||||    
T  32896264 ccactagggataagtattacatcatcataatccaaataacagttaccatgaataatttaattcaaacattatgtacttgatc 32896345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 16889675 - 16889620
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtta-acatgaatat 60  Q
    ||||||||||||||| |||||| || |||||||| |||||||||| ||||||||||    
T  16889675 ccactgggggtaagtattacatcatcataatccacataacagttatacatgaatat 16889620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11214409 - 11214454
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| ||||    
T  11214409 ccactaggggtaagtattacattatcataatccaaataacaattaa 11214454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 18088685 - 18088640
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  18088685 ccactgggggtaagcattacattatcataatccaaataacaattaa 18088640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 17344162 - 17344102
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||| ||| |||||| |||||||| ||||||||| ||| | |||||| ||||||    
T  17344162 ccactgggggtgagtattacatcattataattcaaataacaattatcttgaataattcaat 17344102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 33323028 - 33323075
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaata 59  Q
    ||||||||| |||||| || |||||||| | |||||||||||||||||    
T  33323028 ggggtaagtattacatcatcataatccacacaacagttaacatgaata 33323075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 2e-59; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 10780328 - 10780197
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10780328 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 10780229  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  10780228 tcacatcaatacttacatcaaaccccaatatc 10780197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 34937548 - 34937679
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34937548 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 34937647  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  34937648 tcatatcaatacttacatcaaaccccaatatc 34937679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10284 - 10415
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10284 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 10383  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  10384 ccacatcaatacttacatcaaaccccaatatc 10415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 22885257 - 22885126
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22885257 cagatccactgggggtaagtattacattatcataatccaaataacagtcatcatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 22885158  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  22885157 tcatatcaatacttacatcaaaccccaatatc 22885126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43445924 - 43445793
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43445924 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 43445825  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  43445824 ccacatcaatacttacatcaaaccccaatatc 43445793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 29192880 - 29192749
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| || |||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  29192880 cagatccagtgtgggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcattcacttgatcaataataatattc 29192781  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || |||||||||||||||||||||| |||||    
T  29192780 ccacatcaatacttacatcaaaccccgatatc 29192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 17473915 - 17473788
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||  |    
T  17473915 cagatccaatgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcatttgatcaataaaaata--c 17473818  T
Q  101 tcaaatcaatacttacatcaaaccccaata 130  Q
    ||| ||||||||||||||||||||||||||    
T  17473817 tcacatcaatacttacatcaaaccccaata 17473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35793368 - 35793273
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35793368 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 35793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 19497913 - 19498044
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| | | || |||||| |||||||||||    
T  19497913 cagatccactgggggtaagtattacattatcataatgcaaataacagataacatgaatatttcaatttaaacattacgtacatgatcattaataatattc 19498012  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  19498013 acacatcaatacttacatcaaaccccaatatc 19498044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25212005 - 25211886
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  25212005 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 25211908  T
Q  101 tcaaatcaatacttacatcaaa 122  Q
    ||| ||  ||||||||||||||    
T  25211907 tcatatatatacttacatcaaa 25211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25276157 - 25276038
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  25276157 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 25276060  T
Q  101 tcaaatcaatacttacatcaaa 122  Q
    ||| ||  ||||||||||||||    
T  25276059 tcatatatatacttacatcaaa 25276038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 25944773 - 25944645
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||   ||    
T  25944773 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataa---tc 25944677  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| |||| ||||||    
T  25944676 acacattaatacttacatcacaccctaatatc 25944645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 23986377 - 23986257
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||  |||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| ||||| |    
T  23986377 ccactgggggtaagcattacatcatcataatccaaataacagttaacatggatatttctatataaacatcatgcacttgataaataataatactctcata 23986278  T
Q  106 tcaatacttacatcaaacccc 126  Q
    ||||||||||||||| |||||    
T  23986277 tcaatacttacatcatacccc 23986257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 1171466 - 1171355
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatcaa 121  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  1171466 ttacatcatcataatccaaataacagataacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcatatatatacttacatcaa 1171367  T
Q  122 a-ccccaatatc 132  Q
    | ||||||||||    
T  1171366 agccccaatatc 1171355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11340576 - 11340671
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  11340576 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataat 11340671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18780258 - 18780163
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18780258 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgattaataataat 18780163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 9732805 - 9732677
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   ||    
T  9732805 cagatccactgggggtaagtattacattatcataatccaaataacaggtaacatgaatatttcaagataaacatcatgcatttgatcaataataa---tc 9732709  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| | |||||||||    
T  9732708 acacattaatacttacatcacatcccaatatc 9732677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 27185716 - 27185594
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaat 106  Q
    |||||||||||||| |||||| |  ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||   ||||||| || ||    
T  27185716 cactgggggtaagtattacatcaacataatccaattaacagttaacatggatatttcaatataaacattatgcacttgatcaat---aatattcacatat 27185620  T
Q  107 caatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||||||||||||||    
T  27185619 caatacttacatcaaaccccaatatc 27185594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 21392414 - 21392539
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |    
T  21392414 ccactaggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataaaaatattctcata 21392513  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||| ||||||||||||    
T  21392514 catatacttacatc-aaccccaatatc 21392539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 111196 - 111068
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||   ||    
T  111196 cagatccactgggggtaagtattacattatcataattcaaataacagttaacatggatatttcaatttaaacatcatgcaattgatcaataataa---tc 111100  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| ||||| |||||    
T  111099 acacattaatacttacatcacaccccgatatc 111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 11579901 - 11580017
Alignment:
Q  3 gatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctc 102  Q
    |||||||| ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  11579901 gatccactaggggtaagtattacatcatcataattcaaataacagttaacatgaatatttcaat-ttaacatcatgcacttgatcaataataatattctc 11579999  T
Q  103 aaatcaatacttacatcaaa 122  Q
    | ||  ||||||||||||||    
T  11580000 atat--atacttacatcaaa 11580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1221849 - 1221725
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||  || ||||||||||| ||||||||||| ||||  |    
T  1221849 cagatccactgggggtaagtattacattatcataatccaaataacagttatcatgaacatttca--attaacatcatgcatttgatcaataa-aata--c 1221755  T
Q  101 tcaaatcaatacttacatcaaaccccaata 130  Q
    ||| ||||||||||||||||||||||||||    
T  1221754 tcacatcaatacttacatcaaaccccaata 1221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 21661604 - 21661484
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |   || |    
T  21661604 gggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcaattgatcaataataatattctcatacatatgc 21661505  T
Q  113 ttacatcaa-accccaatatc 132  Q
    ||||||||| |||||||||||    
T  21661504 ttacatcaagaccccaatatc 21661484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 28257763 - 28257885
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || |||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||   |||||||||| || |    
T  28257763 ccactgggggtaagtattacatcatcataatcaaaataacagttaaaatgaaaatt-caatataaacatcatgcacttgatc---aataatattcacata 28257858  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||| |||||||||||    
T  28257859 tcaatacttacatcacaccccaatatc 28257885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 22368692 - 22368602
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  22368692 ccactgggggtaagcattacattatcataatccaaataacagttaacattaatatttcaattaaaacatcatgcacttgatcaataataat 22368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 25424646 - 25424736
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25424646 ccactaggggtaagcattacattatcataattcaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 25424736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 24185155 - 24185067
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  24185155 ccactgggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgtaattgatcaataata 24185067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 4863533 - 4863631
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||||||||| |||||| || |||||| ||| ||||||||| |||||||| || ||||||||||||||||| |||||||||||| |||||||||    
T  4863533 ccactgggggtaagtattacatcatcataatcaaaacaacagttaatcatgaataatttaatataaacatcatgcatttgatcaataatgatattctca 4863631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 16534373 - 16534463
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||  ||||||||| |||||||| |||| | |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  16534373 ccactgggggtaagcattacattatcataatccagataataattaacatggatatttcaatttaaacatcatgcacttgatcaacaataat 16534463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 24470537 - 24470626
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||| |||||| || ||||||||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||    
T  24470537 ccactgggggtaagtattacatcatcataatccaaataacagttagcatgaatagttcaat-ttaacatcatgcatttgatcaataataat 24470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 11338820 - 11338734
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||||||||||  ||| |||||| |||||||||||||    
T  11338820 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaatatttcaattaaaagatcatgtacttgatcaataa 11338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 23510215 - 23510299
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||  || ||||||||||| |||||||||||    
T  23510215 ccacttggggtaagtattacattatcataatccaaatgacagttaacataaatatttca--attaacatcatgcatttgatcaataa 23510299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 11213627 - 11213541
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||| ||||||||| |||||||||||| || | |||||||||||| |||  |||||||||| |||||||| || ||||||    
T  11213627 tgggggtaagtattacattatcataatccaaatatcaatcaacatgaatattacaaattaaacatcatacacttgattaacaataat 11213541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 21647196 - 21647255
Alignment:
Q  33 taatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataat 93  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  21647196 taatccaaatagcagttaacatgaatatttcaat-taatcatcatgcatttgatcaataat 21647255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 17907854 - 17907923
Alignment:
Q  32 ataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||  | || ||||||||||||||||||    
T  17907854 ataatccaaataacagttaatcatggatatttcaatttaaacatctcgtacatgatcaataataatattc 17907923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 23453166 - 23453259
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgat-caataataatat 98  Q
    ||||| ||||||||| |||||| || |||||||| ||||||  ||||||||||| |||||| |||| |||||||| || || ||||||||||||    
T  23453166 ccactaggggtaagtattacatcatcataatccacataacaaataacatgaataattcaatttaaatatcatgcatttaatccaataataatat 23453259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 23460410 - 23460503
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgat-caataataatat 98  Q
    ||||| ||||||||| |||||| || |||||||| ||||||  ||||||||||| |||||| |||| |||||||| || || ||||||||||||    
T  23460410 ccactaggggtaagtattacatcatcataatccacataacaaataacatgaataattcaatttaaatatcatgcatttaatccaataataatat 23460503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 23464671 - 23464764
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgat-caataataatat 98  Q
    ||||| ||||||||| |||||| || |||||||| ||||||  ||||||||||| |||||| |||| |||||||| || || ||||||||||||    
T  23464671 ccactaggggtaagtattacatcatcataatccacataacaaataacatgaataattcaatttaaatatcatgcatttaatccaataataatat 23464764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 7726901 - 7726993
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||||||||| |||||| || |||||||| ||||||| ||| |||||||| ||||||  ||| |||||| |||| |||||| ||||||    
T  7726901 ccactgggggtaagtattacatcatcataatccagataacagctaagcatgaataattcaattcaaatatcatgtacttaatcaatgataata 7726993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 19403801 - 19403869
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgca 80  Q
    ||||||||| |||||| || |||||||| |||| | |||||||||||| ||||||  ||| ||||||||    
T  19403801 ggggtaagtattacatcatcataatccatataataattaacatgaatagttcaattcaaatatcatgca 19403869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 112; Significance: 5e-57; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23017 - 23148
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23017 cagatccacttggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 23116  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  23117 tcatatcaatacttacatcaaaccccaatatc 23148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16353 - 16445
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataat 93  Q
    |||||||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16353 cagatccacttggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataat 16445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 5e-57; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 7290885 - 7291016
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7290885 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 7290984  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| |||||||||||||||||| |||||||||    
T  7290985 tcatatcaatacttacatcaaatcccaatatc 7291016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14253286 - 14253155
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  14253286 cagatccactgggggtaagtattacatcaacataatccaaataacagttaacatgattatttcaatataaacatcatgcacttgattaataataatattc 14253187  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||||||||||||||||||||    
T  14253186 tcaaatcaatacttacatcaaaccccaatatc 14253155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16481052 - 16480921
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16481052 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcacatgatcaataataatattc 16480953  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  16480952 ccacatcaatacttacatcaaaccccaatatc 16480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 369121 - 369251
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  369121 cagatccactgggg-taagtattacattatcataatccaaataacagttaacatgaatatttcaatataaacatcatacatttgatcaataataatattc 369219  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  369220 ccacatcaatacttacatcaaaccccaatatc 369251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 2192821 - 2192691
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2192821 cagatccactgggg-taagtattacattatcataatccaaataacatataacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 2192723  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  2192722 ccacatcaatacttacatcaaaccccaatatc 2192691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 15953073 - 15952944
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||||    
T  15953073 cagatccactggaggtaagtattacattatcataatccaaataatagttaacatgaatatttcaatt--aacatcatgcatttgatcaataataatattc 15952976  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  15952975 tcatatcaatacttacatcaaaccccaatatc 15952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 15824389 - 15824263
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  15824389 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcata 15824290  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  15824289 catatacttacatcaaaccccaatatc 15824263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 44863425 - 44863552
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |    
T  44863425 ccactgggggtaagtattacatcattataatccaaataacagttaacatgaatatttcaatttaaacatcatgtacttgatcaataataatattctcata 44863524  T
Q  106 tcaatacttacatc-aaaccccaatatc 132  Q
       ||||||||||| |||||||||||||    
T  44863525 cttatacttacatcaaaaccccaatatc 44863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18305854 - 18305726
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||    
T  18305854 cagatccactaggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgcacttgatcaat---aatattc 18305758  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||| ||||||||||||||    
T  18305757 acatatcaatacttacaccaaaccccaatatc 18305726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 141857 - 141977
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |   |||    
T  141857 ggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaatcatcatgcacttgatcaataataatattctcatacatata 141956  T
Q  112 cttacatcaaaccccaatatc 132  Q
    |||||||||||||||||||||    
T  141957 cttacatcaaaccccaatatc 141977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7286545 - 7286413
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7286545 cagatccactaggggtaagtattacatcatcataatcaacataacagttaacatgaataattcaatataaacatcatgcacttgatcaataataatattc 7286446  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| ||  ||||||||||| |||||||||||||    
T  7286445 tcatatatatacttacatcaaaaccccaatatc 7286413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 47287958 - 47288054
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctc 102  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47287958 ccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctc 47288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 26072147 - 26072022
Alignment:
Q  8 actgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatc 107  Q
    |||| |||||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |      
T  26072147 actgtgggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattctcataca 26072048  T
Q  108 aatacttacatcaa-accccaatatc 132  Q
     ||||||||||||| |||||||||||    
T  26072047 tatacttacatcaagaccccaatatc 26072022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 26095934 - 26095809
Alignment:
Q  8 actgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatc 107  Q
    |||| |||||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |      
T  26095934 actgtgggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattctcataca 26095835  T
Q  108 aatacttacatcaa-accccaatatc 132  Q
     ||||||||||||| |||||||||||    
T  26095834 tatacttacatcaagaccccaatatc 26095809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16416486 - 16416581
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  16416486 cagatccactgggggtaagtattacattatcataatccaaataacaggtaacatgaatatttcattttaaacatcatgcacttgatcaataataat 16416581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 12753154 - 12753267
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  12753154 ccactgggggtaagtattacatcatcataatccaaataacatttaacatgaataattcaatataaacatcatgtacttgatcaataataatattcacaaa 12753253  T
Q  106 tcaatacttacatca 120  Q
    | |||||||| ||||    
T  12753254 t-aatacttatatca 12753267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13868103 - 13867984
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||    
T  13868103 cagatccactaggggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaacatcatgtacttgatcaataataatattc 13868004  T
Q  101 tcaaatcaatacttacatca 120  Q
    ||| ||  ||||||| ||||    
T  13868003 tcatatatatacttatatca 13867984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2024670 - 2024757
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaa 89  Q
    |||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2024670 cagatccactgggg-taagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaa 2024757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 113186 - 113063
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||| || |   | || |    
T  113186 ccactgggggtaagtattacatcatcataatccaaataacatttagcatgaatatttcaaaataaacattatgcacttgatcaatagtagt---cacata 113090  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||||| | |||||||    
T  113089 tcaatacttacatcaaaactcaatatc 113063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 3893363 - 3893459
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||| ||||    
T  3893363 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaata-ttcaacataaacatcatgcatttgatcaataatgatatcctca 3893459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 16572071 - 16571983
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||| |||||| ||||||||||| |||||||||||||||    
T  16572071 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaataattcaatttaaacatcatgtacttgatcaataata 16571983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 16593591 - 16593679
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||| |||||| ||||||||||| |||||||||||||||    
T  16593591 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaataattcaatttaaacatcatgtacttgatcaataata 16593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 3054964 - 3055049
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  3054964 ccactgggggtaagtattacattatcataattcaaatagcagttaacatgaatatttcaat-taatcatcatgcatttgatcaataa 3055049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 11582858 - 11582737
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||||||||||| |||||   |||||||| || || |    
T  11582858 ccactgggggtaagtattacattatcataatccaaataacagttatcatgaatagttca--attaacatcatgcatttgat---taataataatcacaca 11582764  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| ||| |||||||    
T  11582763 ttaatacttacatcacacctcaatatc 11582737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 122753 - 122838
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||  || ||||||||||| |||||||||||||    
T  122753 cactgggggtaagtattacattatcataatccaaatagcagttaacacgaatatttca--attaacatcatgcatttgatcaataata 122838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 12545813 - 12545692
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || ||| |||| || |||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||| | |   ||||    
T  12545813 gggtaagtattacatcatcatagtccacattacagttaacatgaataattcaattcaaacatcatgtacttgatcaataataatattcttatacatatac 12545714  T
Q  113 ttacatc--aaaccccaatatc 132  Q
    |||||||  |||||||||||||    
T  12545713 ttacatcaaaaaccccaatatc 12545692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 16209958 - 16210045
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| |||||||| |||  ||| ||||||||||| |||||||||||||||    
T  16209958 cactggggataagtattacattatcataatccaaataacagttatcatgaataattc--tattaacatcatgcatttgatcaataataat 16210045  T

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Target: chr7; HSP #28
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 32496469 - 32496381
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||| ||||||||| ||||||||| |||||||||| | ||||||||||||||||||||  || |||| |||||| |||||||||||||||    
T  32496469 ccactaggggtaagtattacattatcataatccaaacagcagttaacatgaatatttca--attaacaacatgcatttgatcaataataat 32496381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 15762463 - 15762369
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||| ||| |||||| |  |||||| ||||||||||||||||| |||||||||| ||||||||| | || ||||||||||||||||||    
T  15762463 ccactaggggtgagtattacatcaacataatcaaaataacagttaacatggatatttcaatttaaacatcacgtacatgatcaataataatattc 15762369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 13039128 - 13039011
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaa 109  Q
    ||||||||||| |||||| |  ||||||||||||||||||| |||||||||||||  || ||||||||||| |||||| |||||||   || || || ||    
T  13039128 tgggggtaagtattacatcaacataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatccataataa---tcacacattaa 13039034  T
Q  110 tacttacatcaaaccccaatatc 132  Q
    ||||||||||| ||| |||||||    
T  13039033 tacttacatcacacctcaatatc 13039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 49049741 - 49049648
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc-aataataatat 98  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  ||| |||||| |||| ||| |||||||||||    
T  49049741 ccactgggggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaatcaaataataatat 49049648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 1938647 - 1938587
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  1938647 ccactaggggtaagtattacattatcataatccaaatagcagttaacatgaatatttcaat 1938587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 45455599 - 45455505
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||| ||||| |||||| || |||||||||||||||||||||||||||| || |||  ||| |||||  |||||||||||||| ||||||    
T  45455599 ccactagggataagtattacatcatcataatccaaataacagttaacatgaataatttaattcaaaaatcatatacttgatcaataatgatattc 45455505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 15628986 - 15629069
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaa 89  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  ||| |||||| |||| |||||    
T  15628986 ccactaggggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaatcaa 15629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 11285328 - 11285391
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaat 66  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||| |||||||||| ||||||    
T  11285328 atccactgggggtaagtattacatcatgataatccacataacagttaaacatgaataattcaat 11285391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 12249961 - 12249907
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatat 60  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||||    
T  12249961 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaatat 12249907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 15914290 - 15914246
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtta 50  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  15914290 ccactgggggtaagtattacatcattataatccacataacagtta 15914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 18255724 - 18255664
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||| ||| |||||| |||||||||||||||||| ||| | |||||| ||||||    
T  18255724 ccactgggggtgagtattacatcattataatccaaataacaattatcttgaataattcaat 18255664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 2435852 - 2435892
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataaca 46  Q
    ||||||||||||||| ||||||||| |||||||| ||||||    
T  2435852 ccactgggggtaagtattacattatcataatccagataaca 2435892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 3e-55; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 18166854 - 18166982
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18166854 atccactgggggtaagtattacattatcataatccaaataacaattaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctca 18166953  T
Q  104 aatcaatacttacatcaaaccccaatatc 132  Q
     ||||||||||||||||||||||||||||    
T  18166954 tatcaatacttacatcaaaccccaatatc 18166982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8372584 - 8372715
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  8372584 cagatccactgggggtaagtattacattatcataatccaaataacagttaacaagaatatttcaatataaacatcatgcatttgatcaataataatattc 8372683  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  8372684 ccacatcaatacttacatcaaaccccaatatc 8372715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 15274686 - 15274555
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  15274686 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcatttgatcaataataaaattc 15274587  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  15274586 ccacatcaatacttacatcaaaccccaatatc 15274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19699629 - 19699498
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| ||||||||||| |||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19699629 cagatccattgggggtaagtattacatcaacataatccaaataacagttaacatgattatttcaatataaacatcatgcacttgatcaataataatattc 19699530  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  19699529 tcatatcaatacttacatcaaaccccaatatc 19699498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19710214 - 19710083
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| ||||||||||| |||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19710214 cagatccattgggggtaagtattacatcaacataatccaaataacagttaacatgattatttcaatataaacatcatgcacttgatcaataataatattc 19710115  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  19710114 tcatatcaatacttacatcaaaccccaatatc 19710083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 7134516 - 7134395
Alignment:
Q  11 gggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaat 110  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  7134516 gggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattcccacatcaat 7134417  T
Q  111 acttacatcaaaccccaatatc 132  Q
    | ||||||||||||||||||||    
T  7134416 aattacatcaaaccccaatatc 7134395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26678156 - 26678284
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  26678156 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 26678253  T
Q  101 tcaaatcaatacttacatcaaaccccaatat 131  Q
     || |||||||||||||||||||||||||||    
T  26678254 ccatatcaatacttacatcaaaccccaatat 26678284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 34393363 - 34393495
Alignment:
Q  2 agatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattct 101  Q
    ||||||||||| ||||||| |||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  34393363 agatccactggaggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattct 34393462  T
Q  102 caaatcaatacttacatc--aaaccccaatatc 132  Q
    || |   |||||||||||  |||||||||||||    
T  34393463 catacatatacttacatcaaaaaccccaatatc 34393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18246155 - 18246250
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18246155 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcacttgatcaataataat 18246250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 12838210 - 12838113
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12838210 ccactgggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattctca 12838113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15211492 - 15211587
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  15211492 cagatccactaggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataat 15211587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 53909768 - 53909651
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |    
T  53909768 ccactgggggtaagtattacatcatcataatccaaataatagttaacatggatatttcaatttaaacatcatgcatttgatcaataataatattctcata 53909669  T
Q  106 tcaatacttacatcaaac 123  Q
       |||||||||||||||    
T  53909668 catatacttacatcaaac 53909651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19998494 - 19998589
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||    
T  19998494 cagatccactgggggtaagtattacattatcataatccaaataacagtcaacatagatatttcaatttaaacatcatgcacttgatcaataataat 19998589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9293689 - 9293817
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||   ||    
T  9293689 cagatccacttggggtaagtattacattatcataatccaaataacagataacatggatatttcaacataaacatcatgcatttgatcaataataa---tc 9293785  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| | |||||||||    
T  9293786 acacattaatacttacatcacatcccaatatc 9293817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10642351 - 10642479
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||   ||    
T  10642351 cagatccactaggggtaagtattacattatcataatccaaataacagataacatgaatatttcaacataaacctcatgcatttgatcaataataa---tc 10642447  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| | |||||||||    
T  10642448 acacattaatacttacatcacatcccaatatc 10642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18294769 - 18294638
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||| || || |||||| |||||| || ||||||||||||||||||| |||| ||||||||||  ||| |||||  |||||||||||||||||||||    
T  18294769 cagatcctctaggagtaagtattacatcatcataatccaaataacagttagcatggatatttcaattcaaatatcatctacttgatcaataataatattc 18294670  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| |||||||||||||| ||| |||||||||    
T  18294669 tcatatcaatacttacattaaatcccaatatc 18294638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 21961442 - 21961344
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatca 120  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  | ||||||||||| ||||    
T  21961442 ttacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgtacttgatcaataataatattcatatatcaatacttaaatca 21961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 22356639 - 22356509
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||  || ||||||||||| ||||||||||| |||| ||    
T  22356639 cagatccactgggggtaagtattacattatcataatccaaataacagttaacaataatatttca--attaacatcatgcatttgatcaataaaaatactc 22356542  T
Q  101 tcaaatcaatacttacatcaa-accccaatatc 132  Q
     || | |||||||| |||||| |||||||||||    
T  22356541 acataacaatacttgcatcaagaccccaatatc 22356509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16520778 - 16520907
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatat-aaacatcatgcacttgatcaataataatatt 99  Q
    |||||||||||||||||||| |||||| || |||||| |||||| |||||||||| |||||||||| | |||||||||||||||||||||||||||   |    
T  16520778 cagatccactgggggtaagtattacatcatcataatctaaataatagttaacatggatatttcaatttaaaacatcatgcacttgatcaataataa---t 16520874  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || || ||||||||||||| ||||| |||||    
T  16520875 cacacattaatacttacatcacaccccgatatc 16520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 8874348 - 8874267
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  8874348 ttacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcatttgatcaataatgatatcctca 8874267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 44345045 - 44345136
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||| |||||| || |||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  44345045 ggggtaagtattacatcatcataatcaaaacaacagttaacatgaataattcaatataaacatcatgcatttgatcaataatgatattctca 44345136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 45460912 - 45460818
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||| |||||||||    
T  45460912 ccactggggataagtattacatcataataatccaaataacagttaacatgaataattcaattcaaacatcatgtacttgatcaatgataatattc 45460818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 53706839 - 53706761
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  53706839 gggtaagtattacatcatcataatccaaataacagttaacatgaatatttcagtataaacatcatgcatttgatcaata 53706761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 33738475 - 33738544
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33738475 ttacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaata 33738544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 55378787 - 55378691
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatat 98  Q
    |||||||||||||||||||| |||||| |  ||||||||| |||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  55378787 cagatccactgggggtaagtattacataaacataatccaa-taactgttaacatggatatttcaatttaaacatcatgcacttaatcaataataatat 55378691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 5684825 - 5684716
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||| | ||||| || || |    
T  5684825 ccactaggggtaagcattatattatcataatccaaataacagttaacatgaatattacaaattaaacatcatgcacttgatcaacactaatactcccata 5684726  T
Q  106 tcaatactta 115  Q
    | ||||||||    
T  5684725 ttaatactta 5684716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 16366642 - 16366520
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||| ||||||||||||||| | ||||||||||  ||||||||||||||   || || |    
T  16366642 ccactgggggtaagtattacatcatcataatccaaataatagttagcatgaatatttcaat-ttaacatcatgcgtttgatcaataataa---tcacaca 16366547  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||| ||||||    
T  16366546 ttaatacttacatcacaccctaatatc 16366520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 20813908 - 20813820
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||||||| |||||| || ||||||||||||| |||||||||||||| ||||||  |||||||||| |||||||||||||||    
T  20813908 ccactaggggtaagtattacatcatcataatccaaataatagttaacatgaataattcaattcaaacatcatgtacttgatcaataata 20813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 109730 - 109817
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||  || |||||||||||  |||||||||||||    
T  109730 ccactgggggtaagtattacattatcataatacaaatagcagttaacatgaatatttca--attaacatcatgcatctgatcaataataa 109817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 12901649 - 12901565
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||| || |||  |||||||||| ||||||||||||    
T  12901649 ccactgggggtaagtattacatcatcataatccaaataacagttaacatgaataatt-aattcaaacatcatgtacttgatcaata 12901565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 13244592 - 13244709
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaa 109  Q
    ||||||||||| |||||| |  ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || || ||    
T  13244592 tgggggtaagtattacatcaacataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaa 13244686  T
Q  110 tacttacatcaaaccccaatatc 132  Q
    ||||||||||| ||| |||||||    
T  13244687 tacttacatcacacctcaatatc 13244709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 30236429 - 30236341
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||||  | |||||||| || ||||||||||||    
T  30236429 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaattcagacatcatgtacctgatcaataata 30236341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 47355491 - 47355614
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||  ||||||||| ||||||||| ||||||||| || ||| ||||||||    |||| ||||| ||||||||||| ||||||| || |    
T  47355491 ccactgggggtaagcattacattatcataatccaa-taacagttatcacgaacatttcaatt---acatgatgcatttgatcaataaaaatattcacata 47355586  T
Q  106 tcaatacttacatca-aaccccaatatc 132  Q
     |||||||||||||| ||||||||||||    
T  47355587 acaatacttacatcagaaccccaatatc 47355614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 13811576 - 13811483
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc-aataataatat 98  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||| ||||||  ||| |||||| |||| ||| |||||||||||    
T  13811576 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaataattcaattcaaatatcatgtacttaatcaaataataatat 13811483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 44054150 - 44054231
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc 87  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||| | || || |||  |||||||||| ||||||||    
T  44054150 ccactgggggtaagtattacatcatcataatccaaataacagttaacataattaatttaattcaaacatcatgtacttgatc 44054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 54120213 - 54120092
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| |  ||||||||| ||||| |||||||| ||||||||||   ||||||||||| | ||||||||||||   || || |    
T  54120213 ccactaggggtaagtattacatcaacataatccaattaacaattaacatggatatttcaatt--aacatcatgcattcgatcaataataa---tcacaca 54120119  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| ||| |||||||    
T  54120118 ttaatacttacatcacacctcaatatc 54120092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17150271 - 17150228
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataa 44  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  17150271 cagatccactgggggtaagtattacattatcataatccaaataa 17150228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43283316 - 43283250
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagtta-acatgaatatttcaat 66  Q
    |||||| ||||||||||||| |||||| || |||||||| |||||||||| ||||||||| ||||||    
T  43283316 cagatctactgggggtaagtattacatcatcataatccacataacagttagacatgaataattcaat 43283250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 18496352 - 18496278
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgca 80  Q
    ||||| ||||||||| | |||| || |||||||| ||||||  ||||||||||| |||||| |||| ||||||||    
T  18496352 ccactaggggtaagtatcacatcatcataatccatataacaaataacatgaatagttcaatttaaatatcatgca 18496278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 15288925 - 15288885
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataaca 46  Q
    ||||||||||||||  ||||||||| |||||||||||||||    
T  15288925 ccactgggggtaagcattacattatcataatccaaataaca 15288885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 108; Significance: 1e-54; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 270306 - 270437
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  270306 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattc 270405  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  270406 tcatatcaatacttacatcaaaccccaatatc 270437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 236394 - 236520
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||| ||||| |||||| || ||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  236394 ccactagggataagtattacatcatcataattcaaataacaattaacatgaatatttcaattcaaacatcatgcacttgatcaataataatattctcata 236493  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||| ||||||||||||    
T  236494 catatacttacatcgaaccccaatatc 236520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 1e-54; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 6776445 - 6776314
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6776445 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 6776346  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  6776345 ccacatcaatacttacatcaaaccccaatatc 6776314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13664766 - 13664635
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  13664766 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaataataatattc 13664667  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  13664666 ccacatcaatacttacatcaaaccccaatatc 13664635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13724041 - 13723910
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  13724041 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaataataatattc 13723942  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  13723941 ccacatcaatacttacatcaaaccccaatatc 13723910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18610405 - 18610536
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18610405 cagatccactgggggtaagtattacatcaacataatccaaataacagttaacatgattatttcaatataaacatcatgcacttgatcaataataatattc 18610504  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  18610505 tcatatcaatacttacatcaaaccccaatatc 18610536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 22909558 - 22909427
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22909558 cagatccactgggggtaagtattacattatcataatccaaataatagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 22909459  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| |||||||||||||||||| |||||||||    
T  22909458 tcatatcaatacttacatcaaatcccaatatc 22909427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 17343457 - 17343586
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17343457 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 17343556  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || |||||||||  |||||||||||||||||    
T  17343557 ccacatcaatact--catcaaaccccaatatc 17343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 22008570 - 22008440
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  22008570 cagatccactgggggtaa-tattacattatcataatccaaataacagttaacataaatatttcaatttaaacatcatgcacttgatcaataataatattc 22008472  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  22008471 ccacatcaatacttacatcaaaccccaatatc 22008440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23509045 - 23509176
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | || ||| |||||||||||||||    
T  23509045 cagatccactgggggtaagtattacattatcataatccaaataacaattaacatgaatatttcaatataaacatcctacatttggtcaataataatattc 23509144  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     |  ||||||||||||||||||||||||||||    
T  23509145 ccgcatcaatacttacatcaaaccccaatatc 23509176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 25120727 - 25120853
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |    
T  25120727 ccactggggttaagtattacatcatcataatccaaataacagttaacatgtatatttcaatttaaacatcatgcacttgatcaataataatattctcata 25120826  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  25120827 catatacttacatcaaaccccaatatc 25120853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 645993 - 645866
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||    
T  645993 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatat-aacatcatgcacttgatc---aataatattc 645898  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||| ||||||    
T  645897 acacatcaatacttacatcaaacccaaatatc 645866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 43375511 - 43375388
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   || || |    
T  43375511 ccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcatttgatcaataataa---tcacaca 43375415  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  43375414 ttaatacttacatcacaccccaatatc 43375388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 831728 - 831601
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||    
T  831728 cagatccactgngggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatat-aacatcatgcacttgatc---aataatattc 831633  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||| ||||||    
T  831632 acacatcaatacttacatcaaacccaaatatc 831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24108680 - 24108561
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  24108680 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 24108583  T
Q  101 tcaaatcaatacttacatcaaa 122  Q
    ||| ||  ||||||||||||||    
T  24108582 tcatatatatacttacatcaaa 24108561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 24719537 - 24719408
Alignment:
Q  1 cagatccactg-ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatatt 99  Q
    ||||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||    
T  24719537 cagatccactgaggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgcacttgatcaat---aatatt 24719441  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || |||||||||| |||||||||||||||||    
T  24719440 cacatatcaatacttgcatcaaaccccaatatc 24719408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 41243930 - 41244056
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||| ||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |    
T  41243930 ccacttgggttaagtattacatcatcataatccaaataacagttaacatgtatatttcaatttaaacatcatgcacttgatcaataataatattctcata 41244029  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  41244030 catatacttacatcaaaccccaatatc 41244056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3433741 - 3433646
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3433741 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaataataat 3433646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 37605271 - 37605390
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||| | |||||| || |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||  |||    
T  37605271 ggggtaattattacatcatcataatctaaataacagttaacatgaatatttcaattcaaacatcatgcacttgatcaataataatattctcatatatata 37605370  T
Q  112 cttacatcaaaccccaatat 131  Q
    ||||||||||||||||||||    
T  37605371 cttacatcaaaccccaatat 37605390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 269928 - 270054
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||    
T  269928 cagatccactgggg-taagtattacatcatcataatccaaataacagttaacatgaatatttcaatat-aacatcatgcacttgatc---aataatattc 270022  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||| ||||||    
T  270023 acacatcaatacttacatcaaacccaaatatc 270054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23631196 - 23631101
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23631196 cagatccactaggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataat 23631101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28835957 - 28836052
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  28835957 cagatccactgggggtaagtattacattatcataatccaaataacagttaacctgaatatttcaatttaaacatcatgcaattgatcaataataat 28836052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 16041589 - 16041462
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||| ||||||| ||    
T  16041589 atccacttggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataaaaatattcaca 16041492  T
Q  104 aatcaatacttacatc-aaaccccaatatc 132  Q
     | ||||||||||||| |||||||||||||    
T  16041491 taacaatacttacatcaaaaccccaatatc 16041462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 16043265 - 16043138
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||| ||||||| ||    
T  16043265 atccactcggggtaagtattacatcatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataaaaatattcaca 16043168  T
Q  104 aatcaatacttacatc-aaaccccaatatc 132  Q
     | ||||||||||||| |||||||||||||    
T  16043167 taacaatacttacatcaaaaccccaatatc 16043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 41509145 - 41509012
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||| |||||||| |||||| || |||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||||||||||||||    
T  41509145 cagatccactgagggtaagtattacatcatcataatccaaataacagttaatatggatatttcaattcaaacatcaggcacttgatcaataataatattc 41509046  T
Q  101 tcaaatcaatacttacatc--aaaccccaatatc 132  Q
    ||| |   |||||||||||  |||||||||||||    
T  41509045 tcatacatatacttacatcaaaaaccccaatatc 41509012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 20655961 - 20655869
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatat 98  Q
    ||||||||||||||| |||||| || ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  20655961 ccactgggggtaagtattacatcatcataatccaaataacagttagcatgaataattcaatataaacatcatgtacttgatcaataataatat 20655869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 19995098 - 19994999
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| ||||||||| |||||| || |||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  19995098 atccacttggggtaagtattacatcatcataatcaaaataatagttaacatgaataattcaatataaacatcatgcatttgatcaataatgatattctca 19994999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 22323432 - 22323310
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || |||| | ||||||||||||||||||| ||| ||||||||||||||||||||||||||||   ||||||| || |    
T  22323432 ccactgggggtaagtattacatcatcataaacaaaataacagttaacatgaaaatt-caatataaacatcatgcacttgatcaat---aatattcacata 22323337  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
     |||| ||||||||| |||||||||||    
T  22323336 acaatgcttacatcacaccccaatatc 22323310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24931031 - 24930906
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||  || ||||||||||||||||  || |||| |||||| ||||||||||||||   ||    
T  24931031 cagatccactgggggtaagtattacattatcataatccaaatagtagataacatgaatatttca--attaacaacatgcatttgatcaataataa---tc 24930937  T
Q  101 tcaaatcaatacttacatcaaaccccaatat 131  Q
     || || || |||||||||| ||||||||||    
T  24930936 acacattaaaacttacatcataccccaatat 24930906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 29758541 - 29758624
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||  || ||||||||||| ||||||||||    
T  29758541 ccactgggggtaagtattacattatcataattcaaatagcagttaacatgaatatttca--attaacatcatgcatttgatcaata 29758624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16204197 - 16204109
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||| || ||||||||||| |||  |||||||||    
T  16204197 ccactgggggtaagtattacattatcataatccaaatagcagttatcatgaatatttcaa-attaacatcatgcatttggccaataataa 16204109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 20479875 - 20479971
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||| ||||||||| |||||| || |||||| |||||||| |||||||| ||| |||||||||||||||||||| |||||||| ||| |||||||||    
T  20479875 ccactaggggtaagtattacatcatcataatcaaaataacacttaacatggatagttcaatataaacatcatgcatttgatcaa-aatgatattctca 20479971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 24387611 - 24387491
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||||||||  || |||| |||||| ||||||||||||||   || || |    
T  24387611 ccactgggggtaattattacattatcataatccaaatagcagataacatgaatatttca--attaacaacatgcatttgatcaataataa---tcacaca 24387517  T
Q  106 tcaatacttacatcaaaccccaatat 131  Q
    | ||||||||||||| ||||| ||||    
T  24387516 ttaatacttacatcataccccgatat 24387491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 28543133 - 28543213
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc 87  Q
    ||||||| ||||||| |||||| || ||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  28543133 ccactggaggtaagtattacatcatcataatccaaataacaattaacatgaataattcaat-taaacatcatgtacttgatc 28543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 16416522 - 16416612
Alignment:
Q  9 ctgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||| |||||| || |||||| |||||| | |||||||| ||| ||||||||||||||||| || |||||||||||| ||||||    
T  16416522 ctgggggtaagtattacatcatcataatcaaaataataattaacatggatagttcaatataaacatcataca-ttgatcaataatgatattc 16416612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 17731405 - 17731333
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatg 78  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||  |||||| |||| ||||||    
T  17731405 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaatgattcaatttaaatatcatg 17731333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 21695881 - 21695941
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||    
T  21695881 ccactaggggtaagtattacatcatcataatccacataacagttaacatgaataattcaat 21695941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 39448657 - 39448573
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    |||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  ||| |||||| |||| | |||| ||||||    
T  39448657 gggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaaccaatgataata 39448573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 22737851 - 22737759
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaatataaacatcatgcacttgatc-aataataata 97  Q
    |||| ||||||||| |||||| || |||||| | ||||||||| |||||||||| ||||||  ||| ||||||||||| ||| ||||||||||    
T  22737851 cactaggggtaagtattacatcatcataatctacataacagttaaacatgaatagttcaattcaaatatcatgcacttaatcaaataataata 22737759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 38531864 - 38531948
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaatataaacatcatgcacttgatcaa 89  Q
    ||||| ||||||||| |||||| || ||||| || ||||||||| |||||||||| ||||||  ||| ||||||||||| |||||    
T  38531864 ccactaggggtaagtattacatcatcataattcatataacagttaaacatgaataattcaattcaaatatcatgcacttaatcaa 38531948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 24547445 - 24547485
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataaca 46  Q
    ||||||||||||||| ||||||||| |||||||| ||||||    
T  24547445 ccactgggggtaagtattacattatcataatccagataaca 24547485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 1e-54; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30140961 - 30141092
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30140961 cagatccactgggtgtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 30141060  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| |||||||||||||||||| |||||||||    
T  30141061 tcatatcaatacttacatcaaatcccaatatc 30141092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 51160358 - 51160227
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  51160358 cagatccacttggggtaagtattacattatcataatccaaataacagttaacatgaatatctcaatttaaacatcatgcacttgatcaataataatattc 51160259  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    |||||||||||||||||||||||| |||||||    
T  51160258 tcaaatcaatacttacatcaaacctcaatatc 51160227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 7e-53
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 54045723 - 54045595
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| ||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54045723 atccactaggggtaagtattacatcatcataatccaaataatagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 54045624  T
Q  104 aatcaatacttacatcaaaccccaatatc 132  Q
     ||||||||||||||||||||||||||||    
T  54045623 tatcaatacttacatcaaaccccaatatc 54045595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 12796700 - 12796832
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata-tt 99  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  12796700 cagatccactgggggtaagtattatattatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcatttgatcaataataaaattt 12796799  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || ||||||||||||||||||||||||||||    
T  12796800 cccacatcaatacttacatcaaaccccaatatc 12796832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16819020 - 16819149
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  16819020 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 16819117  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  16819118 ccacatcaatacttacatcaaaccccaatatc 16819149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 19944785 - 19944913
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| ||||||||| |||||| || ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  19944785 atccactaggggtaagtattacatcatcataatccaaataacagttagcatggatatttcaatttaaacatcatgcacttgatcaataataatattctca 19944884  T
Q  104 aatcaatacttacatcaaaccccaatatc 132  Q
     ||||||||||||||||||||||||||||    
T  19944885 tatcaatacttacatcaaaccccaatatc 19944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11812778 - 11812909
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11812778 cagatccactaggggtaagtattacatcatcataatccaaataacaattaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 11812877  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||  ||||||||||||||||||||||||    
T  11812878 tcatatttatacttacatcaaaccccaatatc 11812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 6148741 - 6148614
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |    
T  6148741 ccactgggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattctcata 6148642  T
Q  106 tcaatacttacatc-aaaccccaatatc 132  Q
       ||||||||||| |||||||||||||    
T  6148641 cacatacttacatcaaaaccccaatatc 6148614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18908656 - 18908751
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18908656 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 18908751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22273011 - 22273106
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22273011 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 22273106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 38166200 - 38166311
Alignment:
Q  11 gggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaat 110  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||    
T  38166200 gggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcatatatat 38166299  T
Q  111 acttacatcaaa 122  Q
    ||||||||||||    
T  38166300 acttacatcaaa 38166311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 319497 - 319375
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctc--aaatcaat 110  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||  ||    
T  319497 gggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcatatatatat 319398  T
Q  111 acttacatc-aaaccccaatatc 132  Q
    ||||||||| |||||||||||||    
T  319397 acttacatcaaaaccccaatatc 319375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 30204678 - 30204804
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    |||||||| |||||| |||||| || ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| |    
T  30204678 ccactgggagtaagtattacatcatcataatccaaataaaagttaatatggatatttcaatataaacatcatgcacttgatcaataataatgttctcata 30204777  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  30204778 catatacttacatcaaaccccaatatc 30204804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 7851660 - 7851792
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  7851660 cagatccactgggggtaagtattacatcatcataatccaaataacagttagtatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 7851759  T
Q  101 tcaaatcaatacttacatca-aaccccaatatc 132  Q
     || ||  ||||||| || | ||||||||||||    
T  7851760 acatatatatacttatatgacaaccccaatatc 7851792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 25057017 - 25057140
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   || || |    
T  25057017 ccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatataaacatcatgcatttgatcaataataa---tcacaca 25057113  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| | |||||||||    
T  25057114 ttaatacttacatcacatcccaatatc 25057140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 50114009 - 50113883
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |     
T  50114009 ccactgggggtaagtattacatcatcataatccaaataatagttaacatgaataattcaatataaacatcatgtacttgatcaataataatattcac-at 50113911  T
Q  106 tcaatacttacatca-aaccccaatatc 132  Q
    ||||||||||||| | ||||||||||||    
T  50113910 tcaatacttacattagaaccccaatatc 50113883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 18737972 - 18738082
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatcaa 121  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  18737972 ttacatcatcataatccaaataacagttaacatgaatattccaatataaacatcatgcacttgatcaatagtactattctcatacatatacttacatcaa 18738071  T
Q  122 accccaatatc 132  Q
    |||||||||||    
T  18738072 accccaatatc 18738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 17098906 - 17099022
Alignment:
Q  17 aagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttac 116  Q
    |||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |   ||||||||    
T  17098906 aagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcaattgatcaataataatattctcataaatatacttac 17099005  T
Q  117 atc-aaaccccaatatc 132  Q
    ||| |||||||||||||    
T  17099006 atcaaaaccccaatatc 17099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 17936432 - 17936564
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaata-tttcaatataaacatcatgcacttgatcaataataatatt 99  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||||||||||||| | |||||  |||||||||||||||||||||||| ||||||||    
T  17936432 cagatccactgggggtaagtattacatcatcataatccacataacagttaacatgaacattttcatcataaacatcatgcacttgatcaattataatatt 17936531  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || |   ||||||| ||||||||||||||||    
T  17936532 cccatacatatacttatatcaaaccccaatatc 17936564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 12351720 - 12351618
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||| || || ||||||||    
T  12351720 gggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcagttgatcaacaataatactcacatatcaatac 12351621  T
Q  113 tta 115  Q
    |||    
T  12351620 tta 12351618  T

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Target: chr3; HSP #21
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 14296712 - 14296805
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  14296712 ccactgggggtaagtgttacatcatcataatccaaataatagttaacatgaatatttcaat-ttaacatcatgcacttgatcaataataatattc 14296805  T

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Target: chr3; HSP #22
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 14302339 - 14302432
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  14302339 ccactgggggtaagtgttacatcatcataatccaaataatagttaacatgaatatttcaat-ttaacatcatgcacttgatcaataataatattc 14302432  T

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Target: chr3; HSP #23
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 13815841 - 13815935
Alignment:
Q  9 ctgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||||||||||| |||||| || |||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  13815841 ctgggggtaagtattacatcatcataatcaaaataacagttaacatgaataattcgatataaacatcatgcatttgatcaataatgatattctca 13815935  T

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Target: chr3; HSP #24
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 17536936 - 17536847
Alignment:
Q  11 gggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| |||||| || |||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  17536936 gggggtaagtattacatcatcataatccacataacatttaacatgaatatttcaatttaaacttcatgcacttgatcaataataatattc 17536847  T

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Target: chr3; HSP #25
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 19230300 - 19230421
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||    | || |    
T  19230300 ccactgggggtaagtattacattatcataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---ccacaca 19230394  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  19230395 ttaatacttacatcacaccccaatatc 19230421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 23490757 - 23490873
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||   || || || |||||    
T  23490757 gggtaagtattacattatcataatccaaataacagataacatgagtatttcaatataaacatcatgcatttgatcaatagtaa---tcacacattaatac 23490853  T
Q  113 ttacatcaaaccccaatatc 132  Q
    |||||||| | |||||||||    
T  23490854 ttacatcacatcccaatatc 23490873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 16183958 - 16183866
Alignment:
Q  11 gggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||||||||| |||||| || |||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  16183958 gggggtaagtattacatcatcataatcaaaataacaattaacatgaataattcaatataaacatcatgcatttgatcaataatgatattctca 16183866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 22146163 - 22146075
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||| ||||| |||||| || ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  22146163 ccactggggataagtattacatcatcataatccaaataatagttaacatgaataattcgatataaacatcatgcacttgatcaataata 22146075  T

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Target: chr3; HSP #29
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 11063038 - 11062944
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||||| ||||||  |||||||||| |||||||||||||||||||||    
T  11063038 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaataattcaattcaaacatcatgtacttgatcaataataatattc 11062944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 11199433 - 11199339
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| |||||| || |||||||| |||||| |||||||||| | |||||| ||||||||||| |||||||||||||||||||||    
T  11199433 ccactgggggtaagtattacatcatcataatccacataacaattaacatgaacaattcaatttaaacatcatgtacttgatcaataataatattc 11199339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 35121903 - 35121991
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| |||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  35121903 ccacttggggtaagtaatacatcatcataatccaaataacagttaacatgaataattcaatataaacatcgtgtacttgatcaataata 35121991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 10736806 - 10736890
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||| ||||||    
T  10736806 ccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgaccaataa 10736890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 2451460 - 2451370
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||  |||||||||  ||||||| ||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||    
T  2451460 ccactgggggtaagcattacattatcttaatccagataacagttaacatggatatttcaatttaaacatcatacacttgatcattaataat 2451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 14523296 - 14523202
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||||||| |||||| || |||||||| |||||| |||||||||||||| |||| ||| ||||||| |||||||||||||||||||||    
T  14523296 ccactaggggtaagtattacatcatcataatccacataacaattaacatgaatattccaatttaaccatcatgtacttgatcaataataatattc 14523202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 14287305 - 14287394
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||| ||||||||| |||||| || |||||||| |||||| |||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  14287305 ccactaggggtaagtattacatcatcataatccacataacaattaacatgaatagttcaatttaaacatcatgtacttgatcaataataa 14287394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 19572711 - 19572589
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||| ||||||| |||||| || ||||||||||||||||||| ||||||||||||||| | |||||||||   ||||||||||||||   || || |    
T  19572711 ccactggaggtaagtattacatcatcataatccaaataacagttagcatgaatatttcaat-ttaacatcatgtgtttgatcaataataa---tcacaca 19572616  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  19572615 ttaatacttacatcacaccccaatatc 19572589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 2048305 - 2048383
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttga 85  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||    
T  2048305 ccactgggggtaagtattacattatcataatccaaatagcagttaacatgaatatttcaat-taatcatcatgcatttga 2048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 17958321 - 17958209
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||| ||| |||||| |  ||||||  |||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||| || || |    
T  17958321 ccactgggggtgagtattacatcaacataatc--aataacagttaacatggatatttcaaagtaaacatcatgtacttgatcaataataatactcccata 17958224  T
Q  106 tcaatacttacatca 120  Q
    | |||||||||||||    
T  17958223 ttaatacttacatca 17958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 49230256 - 49230318
Alignment:
Q  34 aatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  49230256 aatccaaataacagttaacatgaatatttcaattaaaacatcatggacttgatcaataataat 49230318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 53900475 - 53900388
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| |||||| || |||||||||| |||||||| ||| |||| |||||||||||||||||| ||||||||||||| |||||||    
T  53900475 ggggtaagtattacatcatcataatccaaacaacagtta-cataaataattcaatataaacatcatgaacttgatcaataacaatattc 53900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 45581087 - 45581170
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||  || ||||||||||| ||||||||||||||    
T  45581087 tgggggtaaatattacattatcataatccaaatagcagttatcatgaatatttca--attaacatcatgcatttgatcaataataa 45581170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 33340018 - 33340140
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||| ||||||| ||||||||| ||||||||| ||||||||| |||||||| ||||||   |||| |||||| ||||||| |||||||   | ||    
T  33340018 atccactggaggtaagtattacattatcataatccaa-taacagttatcatgaataattcaatt--aacaacatgcatttgatcactaataat---caca 33340111  T
Q  104 aatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||| |||||||||||    
T  33340112 cattaatacttacatcacaccccaatatc 33340140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19262925 - 19262838
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||| ||||||||| ||||||||| ||||||||| || |||||| |||||||| ||||||   ||||||||||| ||||||||||||||    
T  19262925 ccactaggggtaagtattacattatcataatccaattagcagttatcatgaataattcaatt--aacatcatgcatttgatcaataataa 19262838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 47786753 - 47786667
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||||| ||| |||||| || |||||||||||||| |||| ||||||||| |||  || ||||||||| |||||||||||||||    
T  47786753 ccactgggggttagtattacatcatcataatccaaataactgttatcatgaatatatca--attaacatcatgtacttgatcaataata 47786667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 54686530 - 54686599
Alignment:
Q  32 ataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  54686530 ataatccaaataacagttactcatgaatatttcaatttaaacatcacgtacatgatcaataataatattc 54686599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 39654145 - 39654237
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||| |||||||| ||||||  ||| |||||| |||| |||||| ||||||    
T  39654145 ccactgggggtaagtattacatcatcataatccacataacagttaagcatgaataattcaattcaaatatcatgtacttaatcaatgataata 39654237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 15861104 - 15861043
Alignment:
Q  33 taatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||| |||||||||||||| |||||||||| |||| |||||||| |||||||||||||||    
T  15861104 taatccaattaacagttaacatggatatttcaat-taaa-atcatgcatttgatcaataataat 15861043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12490695 - 12490645
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    |||||||||||||||||||| |||||| || |||||||| |||||||||||    
T  12490695 cagatccactgggggtaagtattacatcatcataatccacataacagttaa 12490645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14061128 - 14061039
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||| |||||||| |||||| | ||||||||| |||| |||||| ||||    
T  14061128 ccactaggggtaagtattacatcatcataatccacataacagttaagcatgaataattcaat-tcaacatcatgtacttaatcaatgataa 14061039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 9304840 - 9304771
Alignment:
Q  32 ataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||| |||||| |||| |||||||||| ||||||||  | || ||||||||||||||||||    
T  9304840 ataatccaaataatagttaatcatggatatttcaatttaaacatctcgtacatgatcaataataatattc 9304771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 12563415 - 12563338
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcactt 83  Q
    ||||| ||||||||| |||||| || ||||| || |||||| |||||||||||| |||||| |||| |||||| ||||    
T  12563415 ccacttggggtaagtattacatcatcataattcacataacacttaacatgaataattcaatttaaatatcatgtactt 12563338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 17137681 - 17137742
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaat 66  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||| |||||||| ||||||    
T  17137681 ccactgggggtaagtattacatcatcataatccacataacagttaaccatgaataattcaat 17137742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 15548810 - 15548870
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtta-acatgaatatttcaa 65  Q
    ||||||||||||||| |||||| || |||||||| |||||||||| ||||||||| |||||    
T  15548810 ccactgggggtaagtattacatcatcataatccacataacagttatacatgaataattcaa 15548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 15940360 - 15940300
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||| ||| |||||| |||||||||||||||||| ||| | |||||| ||||||    
T  15940360 ccactgggggtgagtattacatcattataatccaaataacaattatcttgaataattcaat 15940300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 55443766 - 55443714
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaat 58  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||||||||||    
T  55443766 ccactaggggtaagtattacatcatcataatccacataacagttaacatgaat 55443714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 8630042 - 8630100
Alignment:
Q  9 ctgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaat 66  Q
    |||||||||| | |||||| || |||||||||||||||||||| |||| ||||||||||    
T  8630042 ctgggggtaaatattacatcatcataatccaaataacagttaatcatggatatttcaat 8630100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 40937925 - 40937999
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgca 80  Q
    ||||||||||||||| |||||| || |||||||| |||| | ||||||||||||  |||||  ||| ||||||||    
T  40937925 ccactgggggtaagtattacatcataataatccatataataattaacatgaatagctcaattcaaatatcatgca 40937999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 2045576 - 2045613
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaata 43  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  2045576 ccactgggggtaagtattacattatcataatccaaata 2045613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11381059 - 11381108
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagtta 50  Q
    |||||||||||| ||||||| |||||| || |||||||| ||||||||||    
T  11381059 cagatccactggaggtaagtattacatcatcataatccacataacagtta 11381108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 11884102 - 11884049
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaata 59  Q
    ||||| ||||||||| ||| || || |||||||| |||||||||||||||||||    
T  11884102 ccactaggggtaagtattatatgatcataatccacataacagttaacatgaata 11884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 14846540 - 14846495
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| ||||    
T  14846540 ccactgggggtaagtattacattatcataattcaaataacaattaa 14846495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 1e-54; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 20252319 - 20252450
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20252319 cagatctactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatatta 20252418  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  20252419 tcatatcaatacttacatcaaaccccaatatc 20252450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 22408180 - 22408053
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  22408180 ccactaggggtaagtattacatcatcataatccaaataacaattaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcata 22408081  T
Q  106 tcaatacttacatc-aaaccccaatatc 132  Q
    |  ||||||||||| |||||||||||||    
T  22408080 tatatacttacatcaaaaccccaatatc 22408053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 5676553 - 5676427
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||      
T  5676553 ccactgggggtaagtattacatcatcataatccaaataatagttaacatgaatatttcattataaacatcatgcatttgatcaataataatattctcatg 5676454  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  5676453 catatacttacatcaaaccccaatatc 5676427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 41217532 - 41217654
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |   |||    
T  41217532 ggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcataaatata 41217631  T
Q  112 cttacatc--aaaccccaatatc 132  Q
    ||||||||  |||||||||||||    
T  41217632 cttacatcaaaaaccccaatatc 41217654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 15863531 - 15863403
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||   ||    
T  15863531 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaccatcatgcacttgatcaataataa---tc 15863435  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| ||||| |||||    
T  15863434 acacattaatacttacatcacaccccgatatc 15863403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 17146802 - 17146892
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17146802 ccactgggggtaagcattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 17146892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 22352262 - 22352390
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||   ||    
T  22352262 cagatccactggggctaagtattacattatcataatccaaataatagttaacatggatatttcaatttaaacatcatgcacttgatcaataataa---tc 22352358  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     |  || ||||||||||||| |||||||||||    
T  22352359 acgcattaatacttacatcacaccccaatatc 22352390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 22364923 - 22365048
Alignment:
Q  4 atccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||   || ||    
T  22364923 atccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaacataaacctcatgcatttgatcaataataa---tcaca 22365019  T
Q  104 aatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||| | |||||||||    
T  22365020 cattaatacttacatcacatcccaatatc 22365048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 21716419 - 21716506
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  21716419 gggtaagttttacatcatcataatccaaataatagttaacatgaataattcattataaacatcatgtacttgatcaataataatattc 21716506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 35053123 - 35053220
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||||||||||| || |||||| || ||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |||||||    
T  35053123 ccactgggggtaggtattacatcatcataattcaaataacagttaacatgaatatttcaatttaaacaccatgtacttgatcaataataacattctca 35053220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 2422989 - 2422892
Alignment:
Q  32 ataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatcaaaccccaatat 131  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||   |||||| |   |||||||||||||||||||||||    
T  2422989 ataatccaaataacaattaacatggatatttcaatataaacatcatacacttgatcaataata---ttctcatacatatacttacatcaaaccccaatat 2422893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 35524362 - 35524280
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||| |||||| || |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  35524362 ggggtaagtattacatcatcataatccaaagaacagttaacatgaataattcaatataaacatcatgtacttgatcaataata 35524280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 21857735 - 21857856
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||   || || |    
T  21857735 ccactgggggtaagtattacattatcataatccaaataacagttatcatgaataattca--attaacatcatgtatttgatcaataataa---tcacaca 21857829  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  21857830 ttaatacttacatcacaccccaatatc 21857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22080167 - 22080240
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacat 74  Q
    ||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  22080167 cagatccactgggcgtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacat 22080240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 9786327 - 9786236
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||| ||||    
T  9786327 ggggtaagtattacatcatcataatccacataacagttaacatgaacatttcatcataaacatcatacacttgatcaataataatatcctca 9786236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 20895705 - 20895590
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| |  ||||| ||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |    
T  20895705 ccactaggggtaagtattacatcaacataattcaattaactgtttacatgaatatttcaatttaaacatcatgcacttgatcaataataatatactcata 20895606  T
Q  106 tcaatacttacatcaa 121  Q
       |||||||||||||    
T  20895605 catatacttacatcaa 20895590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 18505634 - 18505717
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||| |||||| || ||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||    
T  18505634 ggggtaagtattacatcatcataatccaaataacagttagcatgaatatttcaat-ttaacatcatgcatttgatcaataataat 18505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 37846380 - 37846263
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaa 109  Q
    ||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||  || |||||||||   ||||||||||||||    | || || ||    
T  37846380 tgggggtaagtattacattatcataatccaaatagcagttatcatgaatatttca--attaacatcatgattttgatcaataataa---ccacacattaa 37846286  T
Q  110 tacttacatcaaaccccaatatc 132  Q
    ||||||||||| |||||||||||    
T  37846285 tacttacatcacaccccaatatc 37846263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 20443988 - 20444108
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| ||||||||| | ||||||||||  ||||| |||||||||||||||   ||||||||||| ||||||||||||||    | || |    
T  20443988 ccactaggggtaagtattacattat-acaatccaaatagtagttatcatgaatatttcaatt--aacatcatgcatttgatcaataataa---ccacaca 20444081  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  20444082 ttaatacttacatcacaccccaatatc 20444108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 20529728 - 20529848
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| ||||||||| | ||||||||||  ||||| |||||||||||||||   ||||||||||| ||||||||||||||    | || |    
T  20529728 ccactaggggtaagtattacattat-acaatccaaatagtagttatcatgaatatttcaatt--aacatcatgcatttgatcaataataa---ccacaca 20529821  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  20529822 ttaatacttacatcacaccccaatatc 20529848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 22250905 - 22250861
Alignment:
Q  88 aataataatattctcaaatcaatacttacatcaaaccccaatatc 132  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22250905 aataataatattctcatatcaatacttacatcaaaccccaatatc 22250861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 51658273 - 51658213
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||    
T  51658273 ccactgggggtaagtattacatcatcataatccacataacagttaacatgaataattcaat 51658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 44036809 - 44036756
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaata 59  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  44036809 ccactgtgggtaagtattacattatcataatccaaataacagttatcatgaata 44036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 20956904 - 20956820
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaatataaacatcatgcacttgatcaa 89  Q
    ||||||||||||||| |||||| || |||||||| ||||||||| ||||||||||  |||||  ||| |||||| |||| |||||    
T  20956904 ccactgggggtaagtattacatcatcataatccacataacagttaaacatgaataaatcaatccaaatatcatgtacttaatcaa 20956820  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 22837278 - 22837224
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtt-aacatgaata 59  Q
    ||||||||||||||| |||||| || |||||||| ||||||||| ||||||||||    
T  22837278 ccactgggggtaagtattacatcatcataatccacataacagttaaacatgaata 22837224  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 22837481 - 22837427
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtt-aacatgaata 59  Q
    ||||||||||||||| |||||| || |||||||| ||||||||| ||||||||||    
T  22837481 ccactgggggtaagtattacatcatcataatccacataacagttaaacatgaata 22837427  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24498463 - 24498422
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaat 42  Q
    |||||||||||||||||||  ||||||||| |||||||||||    
T  24498463 cagatccactgggggtaagcattacattatcataatccaaat 24498422  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 35935518 - 35935478
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataaca 46  Q
    ||||||||||||||| ||||||||| |||||||| ||||||    
T  35935518 ccactgggggtaagtattacattatcataatccagataaca 35935478  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 36358190 - 36358138
Alignment:
Q  8 actgggggtaagttttacattattataatccaaataacagtta-acatgaata 59  Q
    ||||||||||||| |||||| || |||||||| |||||||||| |||||||||    
T  36358190 actgggggtaagtattacatcatcataatccacataacagttagacatgaata 36358138  T

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Target: scaffold0483 (Bit Score: 104; Significance: 3e-52; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4854 - 4723
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||| ||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4854 cagatctactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 4755  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  4754 tcatatcaatacttacatcaaaccccaatatc 4723  T

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Target: scaffold0109 (Bit Score: 104; Significance: 3e-52; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 49694 - 49563
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||| ||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49694 cagatctactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 49595  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  49594 tcatatcaatacttacatcaaaccccaatatc 49563  T

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Target: scaffold0023 (Bit Score: 104; Significance: 3e-52; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 156398 - 156268
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  156398 cagatccactgggg-taagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 156300  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||| ||||||||    
T  156299 tcatatcaatacttacatcaaactccaatatc 156268  T

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Target: scaffold0023; HSP #2
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 86172 - 86044
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||   ||    
T  86172 cagatccactgggggtaagtattacattatcataatccaaataacaattaacatgaatatttcactataaacatcatgcatttgatcaataacaa---tc 86076  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| |||||||||||    
T  86075 acacattaatacttacatcacaccccaatatc 86044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 92234 - 92300
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaac 72  Q
    ||||||||||||||| |||||| || |||||||| |||||||||||||| ||||||| ||| |||||    
T  92234 ccactgggggtaagtattacatcatcataatccacataacagttaacataaatatttaaatttaaac 92300  T

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Target: chr2 (Bit Score: 104; Significance: 3e-52; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21140116 - 21140247
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  21140116 cagatccactgggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcatttgatcaataataatattc 21140215  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  21140216 ccacatcaatacttacatcaaaccccaatatc 21140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 42180425 - 42180294
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  42180425 cagatccactgggggtaagtattacatcaacataatccaaataacagttaacatgattatttcaatataaacatcatgcacttgattaataataatattc 42180326  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  42180325 tcatatcaatacttacatcaaaccccaatatc 42180294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21276558 - 21276427
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  21276558 cagatccactggggataagtattacattatcataatccaaataacagttaacatgaatatttcaatataagcatcatgcatttgatcaataatcatattc 21276459  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  21276458 ccacatcaatacttacatcaaaccccaatatc 21276427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12638210 - 12638082
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||    
T  12638210 cagatccactgggggtaagtattacattatcataaaccaaataacagttaacatggatatttcaatttaaacatcatgcaattgatcaataataatattc 12638111  T
Q  101 tcaaatcaatacttacatcaaaccccaat 129  Q
     || |||||||||||||||||||||||||    
T  12638110 ccacatcaatacttacatcaaaccccaat 12638082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3801329 - 3801234
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3801329 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 3801234  T

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Target: chr2; HSP #6
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19888943 - 19888848
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19888943 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 19888848  T

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Target: chr2; HSP #7
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24966402 - 24966530
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||   ||||||||||    
T  24966402 cagatccactaggggtaagtattacatcatcataatccaaataaaagttaacatgaataactcaatataaacatcatgcacttgatc---aataatattc 24966498  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  24966499 acatatcaatacttacatcaaaccccaatatc 24966530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34822292 - 34822387
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34822292 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataat 34822387  T

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Target: chr2; HSP #9
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 36892646 - 36892521
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    |||||| |||||||| |||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  36892646 ccactgcgggtaagtattacatcatcataatcaaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcata 36892547  T
Q  106 tcaatacttacatc-aaaccccaata 130  Q
       ||||||||||| |||||||||||    
T  36892546 catatacttacatcaaaaccccaata 36892521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38707016 - 38706921
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  38707016 cagatccactaggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaattaaaacatcatgcacttgatcaataataat 38706921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 8941694 - 8941784
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8941694 ccactgggggtaagcattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 8941784  T

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Target: chr2; HSP #12
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 25877896 - 25877777
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaa 109  Q
    ||||||||| | |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||| || | |||    
T  25877896 tgggggtaaatattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgcacttgatcaat---aatattcacataacaa 25877800  T
Q  110 tacttacatcaaaccccaatatc 132  Q
    |||||||||||| ||||||||||    
T  25877799 tacttacatcaatccccaatatc 25877777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12644023 - 12643900
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||  || ||||||||||| ||||||||||| ||||  |    
T  12644023 cagatccactgggggtaagtattacattatcataatccaaataacagttatcatgaacatttca--attaacatcatgcatttgatcaataa-aata--c 12643929  T
Q  101 tcaaatcaatacttacatcaaaccccaat 129  Q
    ||| |||||||||||||||||||||||||    
T  12643928 tcacatcaatacttacatcaaaccccaat 12643900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 25210875 - 25210965
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  25210875 ccactgggggtaagtattacattatcataattcaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataat 25210965  T

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Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 4450181 - 4450092
Alignment:
Q  14 ggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  4450181 ggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgaacttgatcaataacaatattctca 4450092  T

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Target: chr2; HSP #16
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 6877706 - 6877791
Alignment:
Q  9 ctgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6877706 ctgggggtaagtattacattatcataatccaaataacaattaacatgaatatttcaatataaacatcatacacttgaacaataata 6877791  T

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Target: chr2; HSP #17
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 8886432 - 8886553
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || |    
T  8886432 ccactgggggtaagtattacattatcataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacaca 8886526  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    ||||||| ||||||| || ||||||||    
T  8886527 tcaatacctacatcacactccaatatc 8886553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 25600161 - 25600249
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| |||||| || |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  25600161 ggggtaagtattacatcatcataatccacataacagttaacatgaatatttcaaactaaacatcatgcacttgatcaataatagtattc 25600249  T

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Target: chr2; HSP #19
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 28972255 - 28972347
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| |||||| || |||||||| |||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  28972255 cactgggggtaagtattacatcatcataatccacataacaattaacatgaatagttcaat-taaacatcatgtacttgatcaataataatattc 28972347  T

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Target: chr2; HSP #20
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 9654809 - 9654693
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaat 106  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||      |||||||| ||||||||||||||   || || ||    
T  9654809 cactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaat------atcatgcatttgatcaataataa---tcacatat 9654719  T
Q  107 caatacttacatcaaaccccaatatc 132  Q
     ||||||||||||| | |||||||||    
T  9654718 taatacttacatcacatcccaatatc 9654693  T

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Target: chr2; HSP #21
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 22282379 - 22282466
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  22282379 ccactaggggtaagtattacattatcataatccaaatagcagttaacatgaatatttcaat-taatcatcatgcatttgatcaataata 22282466  T

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Target: chr2; HSP #22
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 22273146 - 22273233
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  22273146 ccactaggggtaagtattacattatcataatccaaatagcagttaacatgaatatttcaat-taatcatcatgtatttgatcaataata 22273233  T

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Target: chr2; HSP #23
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 15631613 - 15631705
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatat 98  Q
    ||||||||||||||| |||||| || ||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||| |||||    
T  15631613 ccactgggggtaagtattacatcatcataattcaaataacagttaatcatggatatttcaatat-aacatcatgcatttgatcaataacaatat 15631705  T

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Target: chr2; HSP #24
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 22691922 - 22691834
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||| | |||||| || ||| |||| |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  22691922 ggggtaaatattacatcatcatagtccacataacatttaacatgaatatttcaatttaaacttaatgcacttgatcaataataatattc 22691834  T

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Target: chr2; HSP #25
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 22696569 - 22696481
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||| | |||||| || ||| |||| |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  22696569 ggggtaaatattacatcatcatagtccacataacatttaacatgaatatttcaatttaaacttaatgcacttgatcaataataatattc 22696481  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20629336 - 20629257
Alignment:
Q  11 gggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    |||||||||| ||||||||| |||||||||||| |||||| |||||||||||||  || ||||||||||| |||||||||||    
T  20629336 gggggtaagtattacattatcataatccaaatagcagttatcatgaatatttca--attaacatcatgcatttgatcaataa 20629257  T

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Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 269421 - 269498
Alignment:
Q  23 tacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| || ||||||||||||||| |||||||||||| || ||||||||||||||| | ||||||||||| |||||||    
T  269421 tacatcatcataatccaaataacaattaacatgaataattaaatataaacatcatgaatttgatcaataacaatattc 269498  T

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Target: chr2; HSP #28
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 460816 - 460901
Alignment:
Q  8 actgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataa 95  Q
    ||||||||||||| ||||||||| |||||||||||| || ||| |||||||||||||  || ||||||||||| ||||||| ||||||    
T  460816 actgggggtaagtattacattatcataatccaaatagcaattatcatgaatatttca--attaacatcatgcatttgatcagtaataa 460901  T

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Target: chr2; HSP #29
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 23806502 - 23806442
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||    
T  23806502 ccactgggggtaagtattaaattatcataatacaaataacagttaacatgaatatttcaat 23806442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 43644912 - 43644829
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    ||||||||||||||| ||||||||| | |||||||| | |||||| |||||||||||||  || ||||||||||| ||||||||||    
T  43644912 ccactgggggtaagtattacattatcacaatccaaaaagcagttatcatgaatatttca--attaacatcatgcatttgatcaata 43644829  T

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Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 22654327 - 22654412
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  |||  ||||  |||| |||||||||||||    
T  22654327 ggggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaatttcatatacttaatcaataataata 22654412  T

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Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 7319701 - 7319793
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc-aataataatat 98  Q
    ||||| |||||||| |||||| || |||||||| |||||| |||||||||||| ||||||  ||| |||||| |||| ||| |||||||||||    
T  7319701 cactgagggtaagtattacatcatcataatccacataacaattaacatgaataattcaattcaaatatcatgtacttaatcaaataataatat 7319793  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 22861783 - 22861893
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| ||||||||| |||||| |||||||| ||| |||||||||||  | || ||||||| ||| |||||||||||||||   | || || ||||    
T  22861783 ggggtaagtattacattatcataatcaaaataacaattatcatgaatattttca-attaacatcaggcatttgatcaataataat---cacacattaata 22861878  T
Q  112 cttacatcaaacccc 126  Q
    ||||||||| |||||    
T  22861879 cttacatcacacccc 22861893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 22581876 - 22581805
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcat 77  Q
    ||||||||||||||| |||||| || |||||||| ||||||  ||||||||||| |||||| |||| |||||    
T  22581876 ccactgggggtaagtattacatcatcataatccacataacaaataacatgaataattcaatttaaatatcat 22581805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 23823369 - 23823315
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtta-acatgaata 59  Q
    ||||||||||||||| |||||| || |||||||| |||||||||| |||||||||    
T  23823369 ccactgggggtaagtattacatcatcataatccacataacagttagacatgaata 23823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 23825313 - 23825259
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagtta-acatgaata 59  Q
    ||||||||||||||| |||||| || |||||||| |||||||||| |||||||||    
T  23825313 ccactgggggtaagtattacatcatcataatccacataacagttagacatgaata 23825259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24089298 - 24089201
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||||| |||||| | |||||| || |||||||  ||||||||| ||||||||||  |||||  ||| |||||| |||| |||||| ||||||    
T  24089298 cagatccactgcgggtaaatattacatcatcataatccgtataacagttaaacatgaataaatcaattcaaatatcatgtacttaatcaatgataata 24089201  T

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Target: scaffold0138 (Bit Score: 100; Significance: 7e-50; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26428 - 26558
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| || |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26428 cagatccacttggagtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 26527  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||| ||||||||||||    
T  26528 tcatatcaatacttacatc-aaccccaatatc 26558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 15281 - 15166
Alignment:
Q  14 ggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatact 113  Q
    ||||||| |||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||   ||  | || ||||||    
T  15281 ggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatttaaacatcatgcatttgatcaataataa---tcatacattaatact 15185  T
Q  114 tacatcaaaccccaatatc 132  Q
    ||||||| |||||||||||    
T  15184 tacatcacaccccaatatc 15166  T

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Target: scaffold0191 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 706 - 578
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||    
T  706 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaat---aatattc 610  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || ||||||||||||||||||||||||||||    
T  609 acatatcaatacttacatcaaaccccaatatc 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 93; Significance: 1e-45; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30627 - 30759
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30627 cagatccactgggggtaagtattacatcatcataatccacataacagttaacatgaataattcaatataaacatcatgcacttgatcaataataatattc 30726  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| ||  ||||||||||| |||||||||||||    
T  30727 tcatatatatacttacatcaaaaccccaatatc 30759  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 44406 - 44466
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    |||||| |||||||| |||||| || ||||||||||||||| ||| | |||||| ||||||    
T  44406 ccactgagggtaagtattacatcatcataatccaaataacaattatcttgaataattcaat 44466  T

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Target: scaffold0125 (Bit Score: 92; Significance: 4e-45; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 29615 - 29745
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| |||||||||| |||||| |  |||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  29615 cagatccaccgggggtaagtattacataac-ataatcaaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattc 29713  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     |||||||||||||||||||||||||||||||    
T  29714 acaaatcaatacttacatcaaaccccaatatc 29745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 91; Significance: 2e-44; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 13758 - 13632
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  13758 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctcata 13659  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  13658 catatacttacatcaaaccccaatatc 13632  T

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Target: scaffold0171 (Bit Score: 88; Significance: 1e-42; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31015 - 31145
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  31015 cagatccacttggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatattc 31114  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| |  |||||||||||| ||||||||||||    
T  31115 tcataaaaatacttacatc-aaccccaatatc 31145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 87; Significance: 4e-42; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 138691 - 138565
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  138691 ccactgggggtaagtattacatcatcataatccaaataacagttaacattaatatttcaatttaaacatcatgcacttgatcaataataatattttcata 138592  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  138591 cttatacttacatcaaaccccaatatc 138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 76577 - 76694
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||  | |||||||    
T  76577 ggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgat---taataatattcatatatcaata 76673  T
Q  112 cttacatcaaaccccaatatc 132  Q
    |||||||||||||||||||||    
T  76674 cttacatcaaaccccaatatc 76694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 9858 - 9918
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||| ||||||||| |||||| || |||||||| |||| |||||||||||||| ||||||    
T  9858 ccactaggggtaagtattacatcatcataatccacataatagttaacatgaataattcaat 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 87; Significance: 4e-42; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 256845 - 256719
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  256845 ccactaggggtaagtattacatcatcataatccaaataacagttaatatgaatatttcaatataaacatcatgtacttgatcaataataatattctcata 256746  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||||||||||||||||||||||||    
T  256745 catatacttacatcaaaccccaatatc 256719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 72329 - 72214
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || || ||||    
T  72329 ggggtaagtattacatcatcataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaata 72235  T
Q  112 cttacatcaaaccccaatatc 132  Q
    ||||||| | |||||||||||    
T  72234 cttacattacaccccaatatc 72214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 76710 - 76595
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    ||||||||| |||||| || ||||||||||||||||||| || ||||||||||  || ||||||||||| ||||||||||||||   || || || ||||    
T  76710 ggggtaagtattacatcatcataatccaaataacagttatcaagaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaata 76616  T
Q  112 cttacatcaaaccccaatatc 132  Q
    ||||||| | |||||||||||    
T  76615 cttacattacaccccaatatc 76595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 192757 - 192871
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| |  ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || || |||||    
T  192757 gggtaagtattacatcaacataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaatac 192851  T
Q  113 ttacatcaaaccccaatatc 132  Q
    |||||| | |||||||||||    
T  192852 ttacattacaccccaatatc 192871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 125312 - 125195
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaa 109  Q
    |||| ||||||  ||||| || |||||| |||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || || ||    
T  125312 tgggtgtaagtaatacatcatcataatctaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaa 125218  T
Q  110 tacttacatcaaaccccaatatc 132  Q
    ||||||||||| | |||||||||    
T  125217 tacttacatcacatcccaatatc 125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 86; Significance: 2e-41; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 14826 - 14956
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  14826 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataataatattc 14923  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| ||  ||||||||||| |||||||||||||    
T  14924 tcatatatatacttacatcaaaaccccaatatc 14956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 4047 - 4141
Alignment:
Q  3 gatccactgggggtaagttttacattattataatccaaataacagtt-aacatgaatatttcaatataaacatcatgcacttgatca-ataataat 96  Q
    |||||||||||| ||||| |||||| || |||||||| ||||||||| ||||||||||  |||||  ||| |||||| |||| |||| ||||||||    
T  4047 gatccactgggg-taagtattacatcatcataatccacataacagttaaacatgaataaatcaattcaaatatcatgtacttaatcagataataat 4141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 27928 - 28049
Alignment:
Q  2 agatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattct 101  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27928 agatccactgggggtaagtattacatcatcataatccaaataacagttagcatgaatatttcaatttaaacatcatgcacttgatcaataataatattct 28027  T
Q  102 caaatcaatacttacatcaaac 123  Q
    || |   |||||||||||||||    
T  28028 catacatatacttacatcaaac 28049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 85; Significance: 6e-41; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 523 - 643
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaata 111  Q
    |||||| || |||||| || ||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  523 ggggtatgtattacatcatcataatacaaataacagttagcatgaatatttcaatttaagcatcatgcacttgatcaataataatattctcatatcaata 622  T
Q  112 cttacatcaaaccccaatatc 132  Q
    |||||||||||||||||||||    
T  623 cttacatcaaaccccaatatc 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 84; Significance: 2e-40; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15262 - 15167
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15262 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataat 15167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 2e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 91041 - 90942
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  91041 cagatccactgggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaatataaacatcatgcacttgatcaataataatattc 90942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16747 - 16876
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||| ||||||||   ||| ||||||| |||||||||||||||||||    
T  16747 cagatccactgggggtaagtagtacattatcataatctaaataacagttatcatgaacatttcaatt--aacgtcatgcatttgatcaataataatattc 16844  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||| ||||||||||||||||||||||||||||    
T  16845 tcatatcaatacttacatcaaaccccaatatc 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 81; Significance: 2e-38; HSPs: 2)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 3033 - 3164
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||| ||||| |||||| || |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  3033 cagatccactgggg-taagtattacatcatcataatccacataacagttaacatgaataattcaatataaaaatcatgcacttgatcaataataatattc 3131  T
Q  101 tcaaatcaatacttacatc-aaaccccaatatc 132  Q
    ||| ||  ||||||||||| |||||||||||||    
T  3132 tcatatatatacttacatcaaaaccccaatatc 3164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 258 - 392
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  258 cagatccactgggggtaagtattacattatcataatccaaataacagttagcatggatatttcaattcaaacatcatgcacttgatcaataataatattc 357  T
Q  101 tc--aaatcaatacttacatc-aaaccccaatatc 132  Q
    ||  | ||  ||||||||||| |||||||||||||    
T  358 tcatatatatatacttacatcaaaaccccaatatc 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 79; Significance: 2e-37; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 33377 - 33471
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33377 ccactgggggtaagcattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 33471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 79; Significance: 2e-37; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39467 - 39373
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39467 ccactgggggtaagcattacattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattc 39373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 78; Significance: 9e-37; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 4032 - 3935
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4032 ccactaggggtaagtattacatcattataatccaaataatagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatattctca 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 21834 - 21718
Alignment:
Q  17 aagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttac 116  Q
    |||| |||||| || ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  21834 aagtattacatcatcataatccaaataacagttagcataaatatttcaatataaacatcatgcacttgatcaataataatattctcatatatatacttac 21735  T
Q  117 atc-aaaccccaatatc 132  Q
    ||| |||||||||||||    
T  21734 atcaaaaccccaatatc 21718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 76; Significance: 1e-35; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 781 - 876
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  781 cagatccactgggggtaagtattacattatcataatccaaataacagttaacatagatatttcaatttaaacatcatgcacttgatcaataataat 876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 76; Significance: 1e-35; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 10145 - 10015
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| || |||||||| ||||||||| ||||||||||| |||||||||||| || ||||||| ||| |||||||||||| ||| |||||| |||||    
T  10145 cagatccattgtgggtaagtattacattatcataatccaaatgacagttaacatgtatttttcaatttaa-catcatgcactttatcgataatattattc 10047  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
    ||||||||| ||||||||||||||||||||||    
T  10046 tcaaatcaacacttacatcaaaccccaatatc 10015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 1e-35; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 37742 - 37869
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |    
T  37742 ccacttggggtaagtattacatcatcataatccaaataacagttaccatggatatttcaatttaaacatcatgcacttgatcaataataatattctcata 37841  T
Q  106 tcaatacttacatcaa-accccaatatc 132  Q
       ||||||||||||| |||||||||||    
T  37842 catatacttacatcaagaccccaatatc 37869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 1e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5198 - 5293
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  5198 cagatccactgggggtaagtattacattatcataatccaaataacaggtaacatgaatatttcattttaaacatcatgcacttgatcaataataat 5293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 75; Significance: 6e-35; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 31098 - 31192
Alignment:
Q  2 agatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  31098 agatccactaggggtaagtattacattatcataatccaaataacagataacatgaatatttcaatttaaacatcatgcacttgatcaataataat 31192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 75; Significance: 6e-35; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 59847 - 59960
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||    
T  59847 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgcacttgatcaataataatatccacaaa 59946  T
Q  106 tcaatacttacatca 120  Q
    | |||||||| ||||    
T  59947 t-aatacttatatca 59960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 6e-35; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 27145 - 27274
Alignment:
Q  1 cagatccactggggg-taagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatatt 99  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||   |    
T  27145 cagatccactggggggtaagtattacattatcataatccaaataacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataa---t 27241  T
Q  100 ctcaaatcaatacttacatcaaaccccaatatc 132  Q
    | || || ||||||||||||| ||||| |||||    
T  27242 cacacattaatacttacatcacaccccgatatc 27274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 106259 - 106319
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||| ||| |||||| |||||||||||||||||| ||| | |||||||||||||    
T  106259 ccactgggggtgagtattacatcattataatccaaataacaattatcttgaatatttcaat 106319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 77575 - 77696
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||| || || ||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||    
T  77575 cagatccactgggggtaagtattatatcatcataatccaaataacatttaacatggatatttcaatttaaacatcatgcatttgatcaataataatattc 77674  T
Q  101 tcaaatcaatacttacatcaaa 122  Q
    ||| |   ||||||||||||||    
T  77675 tcatacatatacttacatcaaa 77696  T

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Target: scaffold0234 (Bit Score: 73; Significance: 9e-34; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 19507 - 19384
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||   || || |    
T  19507 ccactgggggttagtattacattatcataatccaaataacatttaacatgaatatttcaatataaacatcatgcatttgatcaataataa---tcacaca 19411  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| | |||||||||    
T  19410 ttaatacttacatcacatcccaatatc 19384  T

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Target: scaffold0384 (Bit Score: 72; Significance: 4e-33; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 471 - 376
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  471 cagatccactaggggtaagtattacattatcataatccaaataacagttaacatagatatttcaatttaaacatcatgcacttgatcaataataat 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 72; Significance: 4e-33; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 305 - 400
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  305 cagatccactaggggtaagtattacattatcataatccaaataacagttaccatggatatttcaatttaaacatcatgcacttgatcaataataat 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5316 - 5417
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||| |    
T  5316 cagatccactcggggtaagtattacatcatcataatccaaataacagttaacatgaata-ttcaacataaacatcatgcatttgatcaataatgatatcc 5414  T
Q  101 tca 103  Q
    |||    
T  5415 tca 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 72; Significance: 4e-33; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 12476 - 12567
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  12476 ggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatatagacatcatgcacttgatgaataataatattctca 12567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 71; Significance: 1e-32; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 5827 - 5953
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| | |||||||||||||| ||||||| |    
T  5827 ccactggggataagtattacatcattataatccaaataacagttaacatgaatatttcaattcaaacatcatgtatttgatcaataataacattctcata 5926  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
       ||| |||||| |||||||||||||    
T  5927 catatagttacattaaaccccaatatc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 68; Significance: 9e-31; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 137 - 22
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| |  ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| |    
T  137 ccactgggggtaagtattacatcaacataatccaattaacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatatactcata 38  T
Q  106 tcaatacttacatcaa 121  Q
       |||||||||||||    
T  37 catatacttacatcaa 22  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 6601 - 6486
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| |  ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| |    
T  6601 ccactgggggtaagtattacatcaacataatccaattaacagttaacatggatatttcaatttaaacatcatgcacttgatcaataataatatactcata 6502  T
Q  106 tcaatacttacatcaa 121  Q
       |||||||||||||    
T  6501 catatacttacatcaa 6486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 67; Significance: 3e-30; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 26671 - 26566
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||  | ||||||||    
T  26671 gggtaagtattacatcatcataatccaaagaacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata---ttcatatatcaatac 26575  T
Q  113 ttacatcaa 121  Q
    |||||||||    
T  26574 ttacatcaa 26566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 66603 - 66496
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| || ||||||||||| ||| |||||||||||| |||||||||| ||||||| ||||| ||||||||||||||| || ||||||||    
T  66603 gggtaagtattacatcatcataatccaaatgacatttaacatgaataattcaatataatcatcatgtacttgctcaataataatattcacatatcaatac 66504  T
Q  113 ttacatca 120  Q
    ||||||||    
T  66503 ttacatca 66496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 3e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 68576 - 68690
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||  | || |||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |    
T  68576 ccactgggggtaagtattatgtcatcataatccacataacagttaacatgaataattcaatataaacatcatgtacttgatcaataataatattcgcata 68675  T
Q  106 tcaatacttacatca 120  Q
    | |||||||| ||||    
T  68676 taaatacttatatca 68690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 3e-30; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 20843 - 20969
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaat 106  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| || ||||||||||||| |     
T  20843 cactgggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaatttaagcatcatgcatttgattaacaataatattctcatac 20942  T
Q  107 caatacttacatca-aaccccaatatc 132  Q
      |||||||||||| || |||||||||    
T  20943 atatacttacatcataatcccaatatc 20969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 28432 - 28529
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||    
T  28432 ccactaggggtaagtattacatcatcataatccaaataacagttaacatgaatatttcaattgaaacatcatgcatttgatcaacaataatattctca 28529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 130104 - 129984
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| ||||||||| | |||||||||| || ||||||||||||  |||  || ||||||||||| ||||||||||||||   || || |    
T  130104 ccacttggggtaagtattacattatcagaatccaaatagcatttaacatgaata-atca--attaacatcatgcatttgatcaataataa---tcacaca 130011  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| | |||||||||    
T  130010 taaatacttacatcacatcccaatatc 129984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 66; Significance: 1e-29; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 3106 - 2978
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||   ||    
T  3106 cagatccactaggggtaagtattacatcatcataatccaaataacagttaacatggatatttcaatttaaacataatgcacttgatcattaataa---tc 3010  T
Q  101 tcaaatcaatacttacatcaaaccccaatatc 132  Q
     || || ||||||||||||| ||||| |||||    
T  3009 acacattaatacttacatcacaccccgatatc 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 66; Significance: 1e-29; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 4417 - 4534
Alignment:
Q  16 taagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatactta 115  Q
    ||||| |||||| || ||||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||||| || |||||||||||    
T  4417 taagtattacatcatcataatccaaataacaattaacatgaataagtcaatataaacatcatgtatttgatcaataataatattcacatatcaatactta 4516  T
Q  116 catcaaac-cccaatatc 132  Q
    ||||| || |||||||||    
T  4517 catcatactcccaatatc 4534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21367 - 21236
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||  ||||| |||||||||||||  || |||||||| || |||||||||||||||||||    
T  21367 cagatccactgggggtaagtattacattatcataatccaaatagtagttatcatgaatatttca--attaacatcatacatttgatcaataataatattc 21270  T
Q  101 tcaaatcaatacttacatc--aaaccccaatatc 132  Q
    ||| |   |||||||||||  |||||||||||||    
T  21269 tcatacatatacttacatcaaaaaccccaatatc 21236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 63; Significance: 8e-28; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2452 - 2553
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||| |    
T  2452 cagatccactcggggtaagtattacatcatcataatccaaataacagttaacatgaata-ttcaacataaacatcatgcatttgatcaataatgatatcc 2550  T
Q  101 tca 103  Q
    |||    
T  2551 tca 2553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 63; Significance: 8e-28; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 2889 - 2983
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||||||| |||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  2889 ccactaggggtaagtattacatcatcataatccaaataatagttaacatgaatatttcaatttaaacatcatgcacttgaacaataatagtattc 2983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 63; Significance: 8e-28; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 14172 - 14078
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||||||||| |||||| || |||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  14172 ccactgggggtaagtattacatcatcataatccacataatagttaacatgaatatttcaaactaaacatcatgcacttgatcaataatagtattc 14078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 15708 - 15753
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| ||||    
T  15708 ccactgggggtaagtattacattatcataattcaaataacaattaa 15753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 1e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 114168 - 114080
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    |||||||||||| || |||||| || ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  114168 ccactgggggtatgtattacatcatcataattcaaataacagttaacatgaataattcaatataaacatcatgtacttgatcaataata 114080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 60; Significance: 5e-26; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 1325 - 1205
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| |||||| || |||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||      ||||||| |  |    
T  1325 ccactgggggtaagtattacatcatcataatcaaaataatagttatcatgaataattcaatataaacatcatgcacttgatc------aatattcacgta 1232  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    ||||||||||||||| |||||||||||    
T  1231 tcaatacttacatcacaccccaatatc 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 60; Significance: 5e-26; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17712 - 17831
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| ||||||||||| |||||| || | |||||| ||||||||||||||||||| ||||||  ||||| |||| |||||||||||||||||||||    
T  17712 cagatccaatgggggtaagtattacatcatcaaaatccacataacagttaacatgaataattcaattcaaacaccatgtacttgatcaataataatattc 17811  T
Q  101 tcaaatcaatacttacatca 120  Q
    ||| ||  ||||||| ||||    
T  17812 tcatatatatacttatatca 17831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 60; Significance: 5e-26; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 37609 - 37697
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||  || ||||||||||| |||||||||||||||    
T  37609 ccactgggggtaagtattacattatcataatccaaataacagttaacatgaataattca--attaacatcatgcatttgatcaataataat 37697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 5e-26; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 53913 - 53997
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataa 92  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||    
T  53913 ccactgggggtaagtattacattatcataatccaaataacagttaacatgaatatttca--attaacatcatgcatttgatcaataa 53997  T

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Target: scaffold0195 (Bit Score: 59; Significance: 2e-25; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 17534 - 17631
Alignment:
Q  32 ataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatcaaaccccaatat 131  Q
    ||||||||| |||||||||||||| ||||| |||||||||||| |||||||| |||   |||||||||| || |||||||||||||||||||||||||||    
T  17534 ataatccaattaacagttaacatggatattccaatataaacattatgcacttcatc---aataatattcacatatcaatacttacatcaaaccccaatat 17630  T

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Target: scaffold0195; HSP #2
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 19564 - 19661
Alignment:
Q  32 ataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatcaaaccccaatat 131  Q
    ||||||||| |||||||||||||| ||||| |||||||||||| |||||||| |||   |||||||||| || |||||||||||||||||||||||||||    
T  19564 ataatccaattaacagttaacatggatattccaatataaacattatgcacttcatc---aataatattcacatatcaatacttacatcaaaccccaatat 19660  T

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Target: scaffold0195; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 8557 - 8497
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||||||    
T  8557 ccactgggggtaagtattacatcatcataatcaaaataacaattaacatgaataattcaat 8497  T

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Target: scaffold0195; HSP #4
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 13946 - 13886
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||||||    
T  13946 ccactgggggtaagtattacatcatcataatcaaaataacaattaacatgaataattcaat 13886  T

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Target: scaffold0051 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 56183 - 56273
Alignment:
Q  1 cagatccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaata 91  Q
    |||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  56183 cagatccactaggggtaagtattacatcatcataatccaaataacagttaacatgaataattcaattcaaacatcatgtacttgatcaata 56273  T

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Target: scaffold0480 (Bit Score: 58; Significance: 8e-25; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 7305 - 7208
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||| |||||||||| |||||| || |||||| |||||| |||||||||||||| ||||||||||||||||| || |||||||||||| |||||||||    
T  7305 ccaccgggggtaagtattacatcatcataatcaaaataaaagttaacatgaataattcaatataaacatcatacatttgatcaataatgatattctca 7208  T

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Target: scaffold0622 (Bit Score: 55; Significance: 5e-23; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 7453 - 7546
Alignment:
Q  41 ataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatacttacatc--aaaccccaatatc 132  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| |   |||||||||||  |||||||||||||    
T  7453 ataacagttaacatggatatttcaatttaaacatcatgcacttgatcaagaataatattctcatacatatacttacatcaaaaaccccaatatc 7546  T

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Target: scaffold0450 (Bit Score: 55; Significance: 5e-23; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 4743 - 4650
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||||||| |||||| || |||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  4743 ccactaggggtaagtattacatcatcataatccacataacatttaacatgaatatttcaat-ttaacttcatgcacttgatcaataataatattc 4650  T

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Target: scaffold0338 (Bit Score: 53; Significance: 8e-22; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 6969 - 7057
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| |||| | || |||||||| ||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||    
T  6969 ggggtaagtattacgtcatcataatccacataacagttaacatgaataattcaattcaaacatcatgtacttgatcaataataatattc 7057  T

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Target: scaffold0395 (Bit Score: 52; Significance: 3e-21; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 13953 - 14040
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||||| |||||| |  |||||||||||||||||||||||||||| ||||||  | |||||||| |||||||||||||||||||||    
T  13953 gggtaagtattacatcaacataatccaaataacagttaacatgaataattcaattcagacatcatgtacttgatcaataataatattc 14040  T

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Target: scaffold1610 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold1610
Description:

Target: scaffold1610; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 132 - 11
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| ||||||||| ||||| |||||| |||||| |||||||||||||  || ||||||||||| ||||||||||||||    | || |    
T  132 ccactaggggtaagtattacattatcataattcaaatagcagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---ccacaca 38  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  37 ttaatacttacatcacaccccaatatc 11  T

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Target: scaffold1605 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold1605
Description:

Target: scaffold1605; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 1447 - 1568
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||| ||||||||| ||||||||| ||||| |||||| |||||| |||||||||||||  || ||||||||||| ||||||||||||||    | || |    
T  1447 ccactaggggtaagtattacattatcataattcaaatagcagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---ccacaca 1541  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  1542 ttaatacttacatcacaccccaatatc 1568  T

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Target: scaffold0134 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 25520 - 25644
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||| || ||| ||||||||    ||||| ||||  |||||||||| ||||||| || |    
T  25520 ccactgggggtaagcattacattatcataatccaaataacagttatcaagaacatttcaat---tacatcgtgcatctgatcaataaaaatattcacata 25616  T
Q  106 tcaatacttacatca-aaccccaatatc 132  Q
     |||||||||||||| ||||||||||||    
T  25617 acaatacttacatcagaaccccaatatc 25644  T

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Target: scaffold0014 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 144975 - 145060
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||| || ||||||  |||||||||| ||||||||||||||||||    
T  144975 ggggtaagtattacattatcataatccacataacaattaacatgattaattcaattcaaacatcatgtacttgatcaataataata 145060  T

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Target: scaffold0012 (Bit Score: 49; Significance: 2e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 249412 - 249290
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||||||  | || ||||||| | | ||||||||||||||   || || |    
T  249412 ccactgggggtaagtattacattatcataatccaaataacaattatcatgaatattttca-attaacatcaggaatttgatcaataataa---tcacaca 249317  T
Q  106 tcaatacttacatcaaaccccaatatc 132  Q
    | ||||||||||||| |||||||||||    
T  249316 ttaatacttacatcacaccccaatatc 249290  T

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Target: scaffold1140 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 1287 - 1401
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaatcaatac 112  Q
    |||||||| |||||| |  ||||||||||||||||||| |||||||||||||  || ||||||||||| ||||||||||||||   || || || |||||    
T  1287 gggtaagtattacatcaacataatccaaataacagttatcatgaatatttca--attaacatcatgcatttgatcaataataa---tcacacattaatac 1381  T
Q  113 ttacatcaaaccccaatatc 132  Q
    |||||| | |||||||||||    
T  1382 ttacattacaccccaatatc 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 26855 - 26949
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||| ||||||||| |||||| |  ||| |||||||||||||||||||||||| ||||||  | |||||||| |||||||||| ||||||||||    
T  26855 ccactaggggtaagtattacatcaacatagtccaaataacagttaacatgaataattcaattcagacatcatgtacttgatcaaaaataatattc 26949  T

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Target: scaffold0218 (Bit Score: 46; Significance: 1e-17; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 7127 - 7045
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||||||||||| |||||||||| ||||    
T  7127 ggggtaagtattacattatcataatccaaataacagttatcatgaataattca--attaacatcatgcatttgatcaatagtaat 7045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 75744 - 75664
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc 87  Q
    |||||||||||||| |||||| || ||||||||||||| |||||||||||||| || |||  |||||||||| ||||||||    
T  75744 cactgggggtaagtattacatcatcataatccaaataatagttaacatgaataatttaattcaaacatcatgtacttgatc 75664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 40961 - 41082
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||| ||||| ||||||||| |||||| ||||  ||||||||||||||||| |||| |||  |||||||| ||||||||||||| |   | || |    
T  40961 ccactggggataagtattacattatcataatcaaaattgcagttaacatgaatattacaat-taatgatcatgcatttgatcaataatagt---cacaca 41056  T
Q  106 tcaatacttacatcaaaccccaatat 131  Q
    | ||||||||||||| ||||||||||    
T  41057 ttaatacttacatcacaccccaatat 41082  T

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Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 8373 - 8441
Alignment:
Q  10 tgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatg 78  Q
    ||||||||||| |||||| || ||||||||||||||| |||||||||||| |||| ||||||| |||||    
T  8373 tgggggtaagtattacatcatcataatccaaataacaattaacatgaataattcactataaacgtcatg 8441  T

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Target: scaffold0066 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44267 - 44336
Alignment:
Q  32 ataatccaaataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||| ||||||||| || ||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  44267 ataatccgaataacagtcaatcatgaatatttcaatttaaacatcacgtacatgatcaataataatattc 44336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 52444 - 52505
Alignment:
Q  40 aataacagttaa-catgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    ||||||||| || |||| |||||||||| ||||||||| | || ||||||||||||||||||    
T  52444 aataacagtcaatcatggatatttcaatttaaacatcacgtacatgatcaataataatattc 52505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 3412 - 3320
Alignment:
Q  7 cactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatc-aataataatat 98  Q
    |||||||||||||| | |||| || |||||||| |||| |||||||||||||| ||||||  ||| |||||| |||| ||| |||||||||||    
T  3412 cactgggggtaagtatcacatcatcataatccacataatagttaacatgaataattcaattcaaatatcatgtacttaatcaaataataatat 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 2529 - 2469
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||    
T  2529 ccactaggggtaagtattacatcatcataatccacataacagttaacatgaataattcaat 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 7281 - 7341
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaat 66  Q
    ||||| ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||    
T  7281 ccactaggggtaagtattacatcatcataatccacataacagttaacatgaataattcaat 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 7500 - 7416
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataata 97  Q
    |||||||| |||||| || |||||||| ||||||||||||||||||| ||||||  ||| |||||| |||| | |||| ||||||    
T  7500 gggtaagtattacatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaaccaatgataata 7416  T

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Target: scaffold0498 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 12539 - 12626
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||| ||||||||| ||||||||| |||||||||||| || ||||||||||||  |||  || |||| |||||| |||||||||||||||    
T  12539 ccactaggggtaagtattacattatcataatccaaatagcatttaacatgaata-atca--attaacaacatgcatttgatcaataataat 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 4100 - 4216
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattctcaaa 105  Q
    ||||||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||  |||  || ||||||||| | |||      |||||||||| || |    
T  4100 ccactgggggtaagtattacaatatcataatccaaataacaattaacttgaataaatca--attaacatcatgtatttg------aataatattcacaca 4191  T
Q  106 tcaatacttacatcaaaccccaata 130  Q
    | ||||||||||||| |||||||||    
T  4192 ttaatacttacatcataccccaata 4216  T

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Target: scaffold0103 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 31774 - 31850
Alignment:
Q  22 ttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataatattc 100  Q
    |||||| || |||| ||| |||||| ||| ||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  31774 ttacatcatcataacccacataacattta-catgaatatttcaatttaa-cttcatgcacttgatcaataataatattc 31850  T

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Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5469 - 5388
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataataat 96  Q
    ||||||||| ||||||||| |||||||||||| || ||| ||||||||  |||  || ||||||||||| |||||||||||||||    
T  5469 ggggtaagtattacattatcataatccaaatagcatttatcatgaata-atca--attaacatcatgcatttgatcaataataat 5388  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 21349 - 21394
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||    
T  21349 ccactgggggtaagtattacatcatcataatccaaataacagttaa 21394  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 1640 - 1711
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcactt 83  Q
    ||||||||| |||||| || |||||||| |||||| ||||||||| || || ||| ||||||||||| ||||    
T  1640 ggggtaagtattacatcatcataatccacataacaattaacatgagtaatttaatttaaacatcatgtactt 1711  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 197978 - 197920
Alignment:
Q  35 atccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||||||| ||||||||||| |||||||| | ||| ||||||||| |||||||||||||    
T  197978 atccaaatagcagttaacatggatatttcagt-taatcatcatgcatttgatcaataata 197920  T

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Target: scaffold0521 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 6880 - 6926
Alignment:
Q  13 gggtaagttttacattattataatccaaataacagttaacatgaata 59  Q
    |||||||| |||||| || |||||||| |||||||||||||||||||    
T  6880 gggtaagtattacatcatcataatccatataacagttaacatgaata 6926  T

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Target: scaffold0225 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 28086 - 28131
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| ||||    
T  28086 ccactgggggtaagtattacattatcataattcaaataacaattaa 28131  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 17119 - 17074
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| ||||    
T  17119 ccactgggggtaagtattacattatcataattcaaataacaattaa 17074  T

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Target: scaffold0467 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 11944 - 11857
Alignment:
Q  6 ccactgggggtaagttttacattattataatccaaataacagttaacatgaatatttcaatataaacatcatgcacttgatcaataata 94  Q
    ||||| ||||| ||| |||||| |  |||||| |||||  |||||||||||||||| |||| ||| ||||||||| |||||| ||||||    
T  11944 ccactaggggtgagtattacatcaacataatcaaaatagtagttaacatgaatattacaat-taatcatcatgcatttgatcgataata 11857  T

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Target: scaffold0104 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 51303 - 51342
Alignment:
Q  12 ggggtaagttttacattattataatccaaataacagttaa 51  Q
    ||||||||| ||||||||| ||||||||||||||| ||||    
T  51303 ggggtaagtattacattatcataatccaaataacaattaa 51342  T

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Target: scaffold0044 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 94335 - 94382
Alignment:
Q  56 aatatttcaatataaacatcatgcacttgatcaataataatattctca 103  Q
    |||| ||||||  |||||||||| ||| ||||||||||||||||||||    
T  94335 aataattcaattcaaacatcatgtactggatcaataataatattctca 94382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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