View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5843-13 (Length: 127)
Name: Solexa-NF5843-13
Description: NF5843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5843-13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 43267852 - 43267732
Alignment:
| Q |
7 |
acagagacaatgaaactttggtgcaaggatgtattgaatttgcacagaagctgcagctacaaagtcacgacgtagtgctggtattgtcaatttgggtctg |
106 |
Q |
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| T |
43267852 |
acagagacaatgaaactttggtgcaaggatgtattgaatttgcacagaagctgcagctacaaagtcacgacgtagtgctggtattgtcaatttgagtctg |
43267753 |
T |
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| Q |
107 |
cttaataatattatgcctcta |
127 |
Q |
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|||||||||||||||||||| |
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| T |
43267752 |
tttaataatattatgcctcta |
43267732 |
T |
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