View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5843-22 (Length: 103)

Name: Solexa-NF5843-22
Description: NF5843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5843-22
Solexa-NF5843-22
[»] chr7 (44 HSPs)
chr7 (4-103)||(282829-282928)
chr7 (4-92)||(327406-327494)
chr7 (28-90)||(24679096-24679158)
chr7 (28-88)||(9477442-9477502)
chr7 (27-87)||(9500153-9500213)
chr7 (28-92)||(26787918-26787982)
chr7 (28-87)||(9477136-9477195)
chr7 (32-90)||(10691298-10691356)
chr7 (22-92)||(21939320-21939390)
chr7 (33-91)||(43078060-43078118)
chr7 (32-92)||(7873507-7873567)
chr7 (32-91)||(7873887-7873946)
chr7 (32-91)||(43092036-43092095)
chr7 (33-92)||(46199051-46199110)
chr7 (32-94)||(1449979-1450041)
chr7 (41-90)||(29933190-29933239)
chr7 (28-93)||(30283403-30283468)
chr7 (27-96)||(48058855-48058924)
chr7 (32-92)||(18363293-18363353)
chr7 (27-90)||(36580274-36580337)
chr7 (32-91)||(40139817-40139875)
chr7 (32-98)||(5096780-5096846)
chr7 (32-90)||(11742913-11742971)
chr7 (32-90)||(31530374-31530432)
chr7 (28-90)||(35793375-35793437)
chr7 (32-98)||(39753864-39753930)
chr7 (32-90)||(42436829-42436887)
chr7 (27-92)||(6792047-6792112)
chr7 (28-89)||(28960649-28960708)
chr7 (27-92)||(29933524-29933589)
chr7 (28-77)||(30283717-30283766)
chr7 (28-93)||(47113087-47113152)
chr7 (27-91)||(4049972-4050036)
chr7 (35-91)||(5490503-5490559)
chr7 (27-91)||(28350115-28350179)
chr7 (65-97)||(41243637-41243669)
chr7 (32-88)||(45480084-45480140)
chr7 (27-91)||(46266504-46266568)
chr7 (4-47)||(282518-282561)
chr7 (32-87)||(10691645-10691700)
chr7 (34-77)||(18754514-18754557)
chr7 (27-98)||(23826273-23826344)
chr7 (41-92)||(26974228-26974279)
chr7 (32-91)||(32555556-32555615)
[»] chr5 (36 HSPs)
chr5 (4-97)||(42585979-42586072)
chr5 (32-92)||(6464331-6464391)
chr5 (7-91)||(42586318-42586402)
chr5 (32-96)||(20126432-20126496)
chr5 (32-92)||(36361031-36361091)
chr5 (32-92)||(38162591-38162651)
chr5 (32-90)||(4146393-4146451)
chr5 (38-91)||(128253-128306)
chr5 (27-91)||(36798427-36798491)
chr5 (32-97)||(11480029-11480094)
chr5 (32-92)||(16039756-16039816)
chr5 (28-92)||(20364680-20364744)
chr5 (32-87)||(10169018-10169073)
chr5 (33-92)||(12406039-12406098)
chr5 (28-95)||(20986941-20987008)
chr5 (34-77)||(40428652-40428695)
chr5 (32-98)||(27264101-27264167)
chr5 (32-98)||(28394925-28394991)
chr5 (27-92)||(35166543-35166609)
chr5 (32-90)||(37060153-37060211)
chr5 (65-98)||(2974656-2974689)
chr5 (32-77)||(26366081-26366125)
chr5 (36-92)||(2974894-2974950)
chr5 (27-87)||(3333695-3333755)
chr5 (32-96)||(19849546-19849610)
chr5 (32-92)||(22052437-22052497)
chr5 (28-88)||(34969149-34969209)
chr5 (32-96)||(37333788-37333852)
chr5 (28-88)||(37426706-37426765)
chr5 (32-87)||(4146110-4146165)
chr5 (34-81)||(5003861-5003908)
chr5 (65-92)||(6463968-6463995)
chr5 (22-81)||(14189673-14189732)
chr5 (32-92)||(20126674-20126736)
chr5 (35-70)||(31874110-31874145)
chr5 (32-91)||(38973327-38973385)
[»] chr8 (53 HSPs)
chr8 (6-91)||(755902-755987)
chr8 (4-88)||(4461676-4461760)
chr8 (4-93)||(756085-756174)
chr8 (4-96)||(2802976-2803068)
chr8 (4-96)||(11289275-11289366)
chr8 (4-87)||(6041425-6041508)
chr8 (4-87)||(6045062-6045145)
chr8 (32-91)||(35795587-35795646)
chr8 (4-90)||(6041089-6041174)
chr8 (4-90)||(6044721-6044806)
chr8 (4-87)||(26889619-26889702)
chr8 (42-96)||(23475618-23475672)
chr8 (43-92)||(41602878-41602927)
chr8 (16-92)||(2802646-2802722)
chr8 (32-92)||(17512095-17512155)
chr8 (28-100)||(29340758-29340830)
chr8 (28-92)||(45522443-45522507)
chr8 (35-90)||(4695014-4695069)
chr8 (33-96)||(14170416-14170479)
chr8 (32-87)||(23936282-23936337)
chr8 (50-92)||(26889291-26889333)
chr8 (50-88)||(35795219-35795257)
chr8 (32-90)||(45308454-45308512)
chr8 (33-94)||(23702119-23702180)
chr8 (32-93)||(31947851-31947912)
chr8 (32-77)||(45163716-45163761)
chr8 (27-91)||(23702385-23702449)
chr8 (28-92)||(29196614-29196678)
chr8 (28-91)||(8409817-8409879)
chr8 (32-98)||(1657640-1657706)
chr8 (32-98)||(6335583-6335649)
chr8 (61-91)||(8409486-8409516)
chr8 (32-98)||(14032028-14032094)
chr8 (32-90)||(20788034-20788092)
chr8 (35-93)||(27453534-27453592)
chr8 (27-93)||(28349558-28349624)
chr8 (40-77)||(13190938-13190975)
chr8 (27-96)||(17070901-17070970)
chr8 (27-96)||(17577302-17577371)
chr8 (28-97)||(18929295-18929364)
chr8 (32-93)||(33947041-33947102)
chr8 (32-92)||(1003801-1003860)
chr8 (32-92)||(8951038-8951098)
chr8 (28-92)||(9498907-9498971)
chr8 (43-79)||(14170704-14170740)
chr8 (27-95)||(16982621-16982689)
chr8 (41-77)||(18650944-18650980)
chr8 (27-87)||(25896993-25897053)
chr8 (32-92)||(32498376-32498435)
chr8 (35-71)||(34602033-34602069)
chr8 (27-91)||(37813161-37813225)
chr8 (32-91)||(12278834-12278893)
chr8 (41-88)||(18092913-18092960)
[»] chr4 (45 HSPs)
chr4 (4-92)||(41148163-41148251)
chr4 (9-91)||(41148533-41148615)
chr4 (32-90)||(53831152-53831210)
chr4 (4-92)||(53578883-53578971)
chr4 (27-90)||(19536945-19537008)
chr4 (32-90)||(30064002-30064060)
chr4 (32-92)||(13388159-13388218)
chr4 (33-92)||(35830302-35830361)
chr4 (24-90)||(5547613-5547679)
chr4 (28-91)||(3369846-3369909)
chr4 (32-91)||(26858343-26858402)
chr4 (32-87)||(44271429-44271484)
chr4 (41-103)||(6207441-6207503)
chr4 (27-87)||(14449276-14449336)
chr4 (28-92)||(21552909-21552973)
chr4 (27-91)||(35383764-35383828)
chr4 (27-87)||(37831595-37831655)
chr4 (32-92)||(47742229-47742289)
chr4 (32-99)||(39907339-39907406)
chr4 (41-87)||(5548018-5548064)
chr4 (33-99)||(11824179-11824245)
chr4 (32-98)||(23315633-23315699)
chr4 (32-94)||(30064356-30064418)
chr4 (27-92)||(1420795-1420860)
chr4 (27-96)||(12719697-12719766)
chr4 (32-89)||(29860653-29860710)
chr4 (32-93)||(39906942-39907003)
chr4 (32-91)||(1140621-1140681)
chr4 (50-102)||(14578426-14578478)
chr4 (32-91)||(14816863-14816923)
chr4 (41-77)||(15058833-15058869)
chr4 (27-91)||(23759560-23759624)
chr4 (32-96)||(24415329-24415393)
chr4 (32-88)||(29860836-29860892)
chr4 (28-92)||(30627025-30627089)
chr4 (41-93)||(38828505-38828557)
chr4 (32-92)||(47821473-47821533)
chr4 (32-92)||(51696784-51696844)
chr4 (32-91)||(1186657-1186716)
chr4 (42-97)||(13306918-13306973)
chr4 (32-87)||(28291909-28291964)
chr4 (32-87)||(35901808-35901863)
chr4 (43-90)||(36413974-36414021)
chr4 (32-87)||(47742600-47742655)
chr4 (28-91)||(49804348-49804410)
[»] chr1 (38 HSPs)
chr1 (4-88)||(12074958-12075042)
chr1 (6-91)||(12075244-12075328)
chr1 (25-99)||(3815045-3815119)
chr1 (28-89)||(37008218-37008279)
chr1 (32-93)||(3814757-3814818)
chr1 (9-86)||(23953083-23953160)
chr1 (28-96)||(367171-367239)
chr1 (33-92)||(41915779-41915838)
chr1 (16-90)||(2350076-2350150)
chr1 (33-91)||(3612445-3612503)
chr1 (32-90)||(46895437-46895495)
chr1 (32-94)||(51549396-51549458)
chr1 (42-91)||(46895806-46895855)
chr1 (32-88)||(40877001-40877057)
chr1 (24-91)||(366885-366952)
chr1 (32-90)||(7058379-7058437)
chr1 (33-87)||(43117258-43117312)
chr1 (32-92)||(13344431-13344491)
chr1 (43-91)||(49696932-49696980)
chr1 (32-87)||(41611244-41611299)
chr1 (42-92)||(25085397-25085447)
chr1 (41-91)||(35580737-35580787)
chr1 (42-100)||(44743735-44743793)
chr1 (41-90)||(7196676-7196725)
chr1 (42-95)||(7196977-7197030)
chr1 (43-100)||(25486479-25486536)
chr1 (27-91)||(3377500-3377564)
chr1 (34-90)||(3377769-3377825)
chr1 (32-88)||(7489511-7489567)
chr1 (32-92)||(35580924-35580984)
chr1 (41-97)||(37696543-37696599)
chr1 (32-92)||(50503699-50503759)
chr1 (34-77)||(4059535-4059578)
chr1 (32-91)||(15911671-15911730)
chr1 (34-77)||(16878933-16878976)
chr1 (34-77)||(28552318-28552361)
chr1 (41-96)||(46039146-46039201)
chr1 (22-81)||(50379962-50380021)
[»] chr2 (53 HSPs)
chr2 (6-91)||(8030125-8030210)
chr2 (6-90)||(4856709-4856792)
chr2 (32-96)||(14816053-14816117)
chr2 (44-91)||(35500039-35500086)
chr2 (32-90)||(14815698-14815756)
chr2 (39-91)||(12802467-12802519)
chr2 (28-92)||(20650368-20650432)
chr2 (28-92)||(35500343-35500407)
chr2 (27-96)||(19206136-19206205)
chr2 (32-93)||(39672677-39672737)
chr2 (32-91)||(9780941-9781000)
chr2 (32-91)||(14983956-14984015)
chr2 (27-90)||(15023089-15023152)
chr2 (28-87)||(29370719-29370778)
chr2 (32-91)||(36286409-36286468)
chr2 (32-90)||(10857339-10857397)
chr2 (32-90)||(11363882-11363940)
chr2 (32-90)||(32661690-32661748)
chr2 (32-93)||(52295-52356)
chr2 (32-89)||(17850490-17850547)
chr2 (41-94)||(34600543-34600596)
chr2 (32-96)||(12542412-12542476)
chr2 (27-91)||(21358356-21358420)
chr2 (32-92)||(21631816-21631876)
chr2 (32-100)||(41072083-41072151)
chr2 (32-92)||(44078545-44078605)
chr2 (32-91)||(2755205-2755264)
chr2 (32-91)||(28719316-28719375)
chr2 (49-88)||(30559241-30559280)
chr2 (27-90)||(34679341-34679404)
chr2 (27-93)||(5470586-5470652)
chr2 (60-94)||(22333359-22333393)
chr2 (28-86)||(31226855-31226913)
chr2 (27-96)||(5362169-5362238)
chr2 (27-92)||(14489462-14489526)
chr2 (32-89)||(28451640-28451696)
chr2 (29-90)||(35180538-35180598)
chr2 (60-92)||(4857024-4857056)
chr2 (32-88)||(12542141-12542197)
chr2 (27-91)||(14489213-14489277)
chr2 (32-96)||(19256844-19256908)
chr2 (32-92)||(21633323-21633383)
chr2 (28-92)||(23993911-23993975)
chr2 (32-92)||(28733239-28733299)
chr2 (32-92)||(31025873-31025933)
chr2 (65-97)||(34100764-34100796)
chr2 (27-91)||(44617988-44618052)
chr2 (41-92)||(3368670-3368721)
chr2 (34-89)||(20662516-20662571)
chr2 (65-96)||(25411567-25411598)
chr2 (32-91)||(32661403-32661462)
chr2 (27-90)||(36176981-36177044)
chr2 (32-87)||(43890103-43890158)
[»] scaffold1458 (1 HSPs)
scaffold1458 (27-96)||(1465-1534)
[»] chr3 (54 HSPs)
chr3 (28-92)||(3354937-3355001)
chr3 (29-93)||(17258183-17258247)
chr3 (32-101)||(53254952-53255021)
chr3 (32-93)||(53255280-53255341)
chr3 (32-91)||(32831484-32831543)
chr3 (32-91)||(40988597-40988656)
chr3 (32-90)||(2181315-2181373)
chr3 (32-77)||(32772036-32772081)
chr3 (15-87)||(6128491-6128562)
chr3 (32-99)||(17256559-17256626)
chr3 (32-95)||(51224921-51224984)
chr3 (51-89)||(32831161-32831199)
chr3 (32-94)||(33944865-33944927)
chr3 (33-91)||(40989655-40989713)
chr3 (29-94)||(16883787-16883852)
chr3 (32-89)||(37755193-37755250)
chr3 (28-89)||(49579164-49579225)
chr3 (27-92)||(51315735-51315800)
chr3 (32-96)||(46934033-46934097)
chr3 (32-92)||(46934243-46934303)
chr3 (33-93)||(50380152-50380212)
chr3 (40-91)||(1807436-1807487)
chr3 (27-94)||(3193032-3193099)
chr3 (4-39)||(8241230-8241265)
chr3 (65-96)||(51315519-51315550)
chr3 (60-90)||(8240599-8240629)
chr3 (32-98)||(43001880-43001946)
chr3 (32-98)||(44177280-44177346)
chr3 (32-98)||(44183964-44184030)
chr3 (32-102)||(44895637-44895707)
chr3 (32-102)||(54716762-54716832)
chr3 (37-90)||(35495208-35495261)
chr3 (32-89)||(36315790-36315847)
chr3 (32-92)||(40410129-40410190)
chr3 (27-92)||(42686480-42686545)
chr3 (39-96)||(44701809-44701866)
chr3 (32-77)||(55094633-55094678)
chr3 (27-91)||(20432189-20432253)
chr3 (27-91)||(28712712-28712776)
chr3 (27-87)||(44586037-44586097)
chr3 (32-92)||(50381562-50381622)
chr3 (43-91)||(53764574-53764622)
chr3 (32-92)||(54476041-54476101)
chr3 (32-92)||(54716474-54716534)
chr3 (28-67)||(1807652-1807691)
chr3 (27-90)||(20432434-20432497)
chr3 (32-91)||(32770650-32770709)
chr3 (35-90)||(33447230-33447285)
chr3 (28-83)||(33687611-33687666)
chr3 (32-91)||(42465690-42465749)
chr3 (32-87)||(47284547-47284602)
chr3 (32-87)||(51226506-51226561)
chr3 (50-97)||(52917592-52917639)
chr3 (41-96)||(54477334-54477389)
[»] chr6 (25 HSPs)
chr6 (32-90)||(28574562-28574620)
chr6 (28-90)||(30369784-30369845)
chr6 (43-96)||(9070136-9070189)
chr6 (43-91)||(12798726-12798774)
chr6 (28-92)||(12799044-12799108)
chr6 (16-70)||(2078186-2078240)
chr6 (28-90)||(2538983-2539044)
chr6 (32-90)||(11623159-11623217)
chr6 (32-93)||(12730591-12730652)
chr6 (32-96)||(22515967-22516031)
chr6 (32-91)||(4037037-4037096)
chr6 (34-77)||(4597418-4597461)
chr6 (16-55)||(6499786-6499825)
chr6 (32-87)||(12203895-12203950)
chr6 (32-87)||(33265089-33265144)
chr6 (41-87)||(7504887-7504933)
chr6 (42-91)||(2173885-2173934)
chr6 (29-90)||(11624301-11624362)
chr6 (32-96)||(4405496-4405560)
chr6 (32-92)||(4793832-4793892)
chr6 (32-96)||(6261632-6261696)
chr6 (27-91)||(12766465-12766529)
chr6 (27-95)||(30349607-30349675)
chr6 (32-91)||(11745997-11746056)
chr6 (32-91)||(28960227-28960285)
[»] scaffold0515 (1 HSPs)
scaffold0515 (27-96)||(3633-3702)
[»] scaffold0306 (1 HSPs)
scaffold0306 (27-96)||(3633-3702)
[»] scaffold0725 (1 HSPs)
scaffold0725 (37-92)||(6692-6747)
[»] scaffold0854 (1 HSPs)
scaffold0854 (32-89)||(1844-1901)
[»] scaffold0017 (1 HSPs)
scaffold0017 (8-80)||(27911-27983)
[»] scaffold0028 (2 HSPs)
scaffold0028 (32-91)||(32265-32324)
scaffold0028 (32-90)||(31979-32037)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-91)||(122585-122644)
[»] scaffold0468 (1 HSPs)
scaffold0468 (32-90)||(10351-10409)
[»] scaffold0035 (1 HSPs)
scaffold0035 (32-98)||(81557-81623)
[»] scaffold0016 (1 HSPs)
scaffold0016 (51-101)||(199655-199705)
[»] scaffold0286 (1 HSPs)
scaffold0286 (42-91)||(20107-20156)
[»] scaffold0005 (2 HSPs)
scaffold0005 (32-91)||(22788-22848)
scaffold0005 (50-102)||(238897-238949)
[»] scaffold0683 (1 HSPs)
scaffold0683 (34-77)||(5133-5176)
[»] scaffold0419 (1 HSPs)
scaffold0419 (34-77)||(2974-3017)
[»] scaffold0400 (1 HSPs)
scaffold0400 (65-92)||(8566-8593)
[»] scaffold0365 (1 HSPs)
scaffold0365 (65-92)||(9209-9236)


Alignment Details
Target: chr7 (Bit Score: 76; Significance: 1e-35; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 282829 - 282928
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatattag 103  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  282829 catagggggccaaaatcgaattattttagttagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagcctattttatattag 282928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 327406 - 327494
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  327406 catagggggccaaaatcgaatcattttagttagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagccta 327494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 24679096 - 24679158
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||| |||||||| ||| || |||||||||||||||||||||||| |||||||||    
T  24679096 ttttgttagggggccaaaatcgcaatttcttgaaacatagggggccaaaactgttattaagcc 24679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 9477442 - 9477502
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||||||| |||||||| ||||||||| ||||||||| || ||||||||||||||||    
T  9477442 ttttgttagggggccaaaatcgcaactttttaaaacataggaggtcaaaactgctattaag 9477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 9500153 - 9500213
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| |||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||    
T  9500153 tttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 26787918 - 26787982
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||| | | |||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  26787918 ttttgttaggaggcaaaaatcacaactttttgaaatatagggggccaaaactactattaagccta 26787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 9477195 - 9477136
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| ||| | |||||| ||||||||| ||||||||||||||||||||||||||||    
T  9477195 ttttgttaaggggctaaaatcgcaactttttaaaacatagggggccaaaactgctattaa 9477136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 10691356 - 10691298
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  10691356 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaattgcaattaagcc 10691298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 21939320 - 21939390
Alignment:
Q  22 aattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| ||||| ||||||| |||||||| ||||||  ||| || ||||||||||||||||||||||||||||    
T  21939320 aattgttttttttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagccta 21939390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 43078060 - 43078118
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| |||||||| |||||| |||||||| ||||||||||| ||||||||||||||    
T  43078060 ttagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctattaagcct 43078118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 7873567 - 7873507
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||  ||||||||||||||| ||||||||| ||||||||||    
T  7873567 gttagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagccta 7873507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 7873887 - 7873946
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||  |||||||| ||| || ||||||||||||||||||||||||| |||||||||    
T  7873887 gttagggagccaaaatcacaatttcttgaaacatagggggccaaaactgcaattaagcct 7873946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 43092036 - 43092095
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||   ||||| |||||||||||||||||||| ||||||||||||||    
T  43092036 gttagggggccaaaattgtaacttcttgaaacatagggggccaaatctgctattaagcct 43092095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 46199110 - 46199051
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||||||||| |||||| || ||| |||| ||| ||||||||||||||||||||    
T  46199110 ttaggggaccaaaatcgcaacttcttaaaatatagaggggcaaaactgctattaagccta 46199051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 1450041 - 1449979
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||| |||||||  ||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  1450041 gttagggggccaaaattgcaactttttgaaagataggtggccaaaagtgcaattaagcctatt 1449979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 29933239 - 29933190
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||| |||||||||||| || ||||||||||||||||||    
T  29933239 ccaaaatcgcaacttcttgaaacataggaggtcaaaactgctattaagcc 29933190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 30283468 - 30283403
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| ||| |||||||| |||||| |||||||||| ||||  |||||||| |||||||||||    
T  30283468 ttttgttatggggccaaaatcgcaacttcttgaaacataaggggtaaaaactgcaattaagcctat 30283403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 48058924 - 48058855
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||  |||||||||||||| ||| ||||    
T  48058924 tttttcttaaggggccaaaatctcaacttgttgaaacttagggggttaaaactgctattaatcctttttt 48058855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 18363353 - 18363293
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||| ||| ||||||||||    
T  18363353 gttaggggtccataatcgcaacttttggaaacataggggtccaaaagtgcaattaagccta 18363293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 36580337 - 36580274
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| |||||||||||||||| ||||||  |||||  |||||| | |||||||||||||||||    
T  36580337 tttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 40139817 - 40139875
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| |||||||||    
T  40139817 gttagggg-ccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaagcct 40139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 5096846 - 5096780
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  5096846 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 5096780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 11742913 - 11742971
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||| ||| ||||||||    
T  11742913 gttaggggatcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 11742971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 31530374 - 31530432
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||  ||||||| |||||||| |||| |||||||||||||| ||| ||||||||    
T  31530374 gttagggggtcaaaatcccaacttttggaaagatagggggccaaaagtgcaattaagcc 31530432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 35793437 - 35793375
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||| | |||||| ||||||  | |||  ||||||||||||||||||||||||||    
T  35793437 ttttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctattaagcc 35793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 39753930 - 39753864
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  39753930 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 39753864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 42436887 - 42436829
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| ||||||||  ||||| || |||||||||||||||||| ||| ||||||||    
T  42436887 gttaggggtccaaaatcgtaacttcttaaaacatagggggccaaaaatgcaattaagcc 42436829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 6792047 - 6792112
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| |||||||||||||||| |||||||   |||  |||||||| |||||||||||||| ||||    
T  6792047 tttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaaccta 6792112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 28960708 - 28960649
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    ||||||||||| ||||||||| |||||| |||| || |||||| ||||||||||||||||||    
T  28960708 ttttgttaggg-accaaaatcacaacttcttgatacttagggg-ccaaaactgctattaagc 28960649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 29933524 - 29933589
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| |||||| | |||||||| |||||| || |||||||| ||| |||||||| |||||||||||    
T  29933524 ttttagttaggaggccaaaatcgcaacttcttaaaacatagagggtcaaaactgttattaagccta 29933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 30283717 - 30283766
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||| |||||||  ||||||| ||||||||||| ||||||||||||||||    
T  30283717 ttttattagggggtcaaaatcgcaactttttgatacatagggggccaaaa 30283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 47113152 - 47113087
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||| |||||||||||||||| |||  |||||||||||| ||||  ||||||||  ||||||||||    
T  47113152 ttttattaggggaccaaaatcgcaatgttttgaaacatatggggagaaaactgcatttaagcctat 47113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 4049972 - 4050036
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| ||||||  |||||  || ||||| ||||||||||||||||||    
T  4049972 tttttcttagggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagcct 4050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 5490559 - 5490503
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| |||||||| ||||||||||||||||| ||||  |||| |||| ||||||||    
T  5490559 agggggccaaaatcgcaactttttgaaacataaggggtgaaaagtgcttttaagcct 5490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 28350179 - 28350115
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| ||||||||  |||||  |||||  |||||||| ||||||||||||||||||    
T  28350179 tttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 41243669 - 41243637
Alignment:
Q  65 tagggggccaaaactgctattaagcctatttta 97  Q
    |||||||| ||||||||||||||||||||||||    
T  41243669 tagggggctaaaactgctattaagcctatttta 41243637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 45480084 - 45480140
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    ||||| ||||||||||| ||||||||  ||| |||||||||||||| ||| ||||||    
T  45480084 gttagaggaccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaag 45480140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 46266504 - 46266568
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| |||||||  ||||||  |||||| ||||||| ||||| || ||||||||||||||||||    
T  46266504 tttttcttaggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaagcct 46266568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 282561 - 282518
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaat 47  Q
    |||| |||||| ||||||||||||||| |||||||| |||||||    
T  282561 catatggggccaaaatcgaattattttagttagggggccaaaat 282518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 10691645 - 10691700
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| ||||||||  ||||| |||||||||||||||  |||||||| |||||    
T  10691645 gttagggggccaaaatcgtaacttcttgaaacatagggggtaaaaactgcaattaa 10691700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 18754514 - 18754557
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||||    
T  18754514 taggggaccaaaatcgcaacattttgaaacttagggggcgaaaa 18754557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 23826273 - 23826344
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    ||||| ||| ||| |||||||| ||||||  |||||  |||||| | ||||||||||||||||||| |||||    
T  23826273 tttttcttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaatttat 23826344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 26974279 - 26974228
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||| |||||| |||||||||||||| ||| ||||| ||||    
T  26974279 ccaaaatcgcaacttcttgaaatatagggggccaaaagtgcaattaaaccta 26974228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 32555556 - 32555615
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| ||| || | ||||||||||||| ||||||| |||||| ||| |||||||||    
T  32555556 gttaggggtccataaccgcaactttttgaaagataggggtccaaaagtgcaattaagcct 32555615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 2e-34; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 42586072 - 42585979
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42586072 catagggggccgaaatcgaattattttagttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctatttta 42585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 6464331 - 6464391
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  6464331 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 6464391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 42586318 - 42586402
Alignment:
Q  7 agggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| ||||| ||||||||| |||||||| |||||||| |||||| |  |||||| |||||||||||||||||||||||||    
T  42586318 agggggccaaaatcaaattattttagttagggggccaaaatcgcaacttctgtaaacatggggggccaaaactgctattaagcct 42586402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 20126496 - 20126432
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||||||  ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20126496 gttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagcctatttt 20126432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 36361091 - 36361031
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||| ||||||| |||||| |||||||||||||| |||||||||| ||||||||||    
T  36361091 gttaggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagccta 36361031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 38162651 - 38162591
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||| ||||||||||    
T  38162651 gttaggggtccaaaatcacaacttcttgaaacatagggggccaaaagtgcaattaagccta 38162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 4146393 - 4146451
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||| ||| ||||||||    
T  4146393 gttaggggaccaaaatcacaacttttggaaagatagggggccaaaagtgcaattaagcc 4146451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 128306 - 128253
Alignment:
Q  38 ggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||||  |||||| ||||||||||||||| |||||||||||||||||||    
T  128306 ggaccaaaattgcaacttcttgaaacatagggggtcaaaactgctattaagcct 128253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 36798427 - 36798491
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| |||||||||||||||| |||||||  ||||  |||||||| ||||||||||||||||||    
T  36798427 tttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagcct 36798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 11480094 - 11480029
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    |||||||| ||| || |||||||||| |||| ||||||| |||||| ||| |||||||||||||||    
T  11480094 gttaggggtccataacctcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 11480029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 16039756 - 16039816
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||| |||||||| |||| ||||||||| |||| ||| || |||||||    
T  16039756 gttaggggaccaaaatcgcaacttttggaaagatagggggctaaaagtgcaatcaagccta 16039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 20364744 - 20364680
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||||  ||||||| ||||||  ||| || ||||||| ||||||||||||||||||||    
T  20364744 ttttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagccta 20364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 10169073 - 10169018
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||||| ||| |||||    
T  10169073 gttaggggaccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaa 10169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 12406098 - 12406039
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||||    
T  12406098 ttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 12406039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 20987008 - 20986941
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattt 95  Q
    |||||||||| || ||||||| ||||||| ||| || ||| ||| ||||||||||||||| |||||||    
T  20987008 ttttgttaggagatcaaaatcacaactttctgatacttagagggtcaaaactgctattaaacctattt 20986941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 40428695 - 40428652
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||    
T  40428695 taggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 40428652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 27264167 - 27264101
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  27264167 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 27264101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 28394991 - 28394925
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  28394991 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 28394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 35166543 - 35166609
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggcc-aaaactgctattaagccta 92  Q
    ||||| |||||||||||||||| ||||||  |||||  ||||||| | |||||||||||||||||||    
T  35166543 tttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaaaactgctattaagccta 35166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 37060153 - 37060211
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||  |||||||| |||| |||||||||||||| ||| ||||||||    
T  37060153 gttaggggtccaaaattgcaacttttggaaagatagggggccaaaagtgcaattaagcc 37060211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 2974689 - 2974656
Alignment:
Q  65 tagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| |||||||||||||||||||||||||    
T  2974689 tagggggctaaaactgctattaagcctattttat 2974656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 26366081 - 26366125
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  26366081 gttagggg-ccaaaatcacaacttcttgaaacatagggggccaaaa 26366125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 2974894 - 2974950
Alignment:
Q  36 ggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| |||||||| ||||||  |||||  |||||||| |||||||||||||||||||    
T  2974894 gggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagccta 2974950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 3333755 - 3333695
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| |||||||| ||||||| ||||||  |||||  |||||||| ||||||||||||||    
T  3333755 tttttcttaggggatcaaaatcgcaacttcatgaaagttagggggcgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 19849610 - 19849546
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||| || | ||||||||||||| ||||||| |||||| ||| ||||| ||||||||    
T  19849610 gttaggggtccataaccgcaactttttgaaagataggggtccaaaagtgcaattaaacctatttt 19849546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 22052497 - 22052437
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||| || | |||||||| |||| |||||||||||||| ||| ||||||||||    
T  22052497 gttaggggtccataaccgcaacttttggaaagatagggggccaaaagtgcaattaagccta 22052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 34969149 - 34969209
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| ||| |||||||| |||||| || |||||||| |||||||||||  |||||||    
T  34969149 ttttgttatgggtccaaaatcgcaacttcttaaaacatagagggccaaaactcttattaag 34969209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 37333788 - 37333852
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||||||||||||| | |||||||| |||| ||| ||| |||||| ||| ||||||||| ||||    
T  37333788 gttaggggaccaaaaccgcaacttttagaaagataagggtccaaaagtgcaattaagcctttttt 37333852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 37426706 - 37426765
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||||||| | |||||  ||||||| ||| || ||||||||||||||||||||||||    
T  37426706 ttttgttagggg-ctaaaattgcaactttctgatacttagggggccaaaactgctattaag 37426765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 4146165 - 4146110
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| |||||    
T  4146165 gttaggggtccaaaatcgcaacttttgaaaagatagggggccaaaaatgcaattaa 4146110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 5003861 - 5003908
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaactgc 81  Q
    ||||||||||||||| |||| || ||| || |||||||||||||||||    
T  5003861 taggggaccaaaatcacaacattgtgatacttagggggccaaaactgc 5003908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 92
Target Start/End: Complemental strand, 6463995 - 6463968
Alignment:
Q  65 tagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||||||||||||||    
T  6463995 tagggggccaaaactgctattaagccta 6463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 14189732 - 14189673
Alignment:
Q  22 aattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgc 81  Q
    |||| ||||| |||||||||||||||| || |||| |||||  ||||||| |||||||||    
T  14189732 aattttttttattaggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgc 14189673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 20126674 - 20126736
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggg--gccaaaactgctattaagccta 92  Q
    ||||||||  ||||||| |||||| || |||||||||||  ||||||||| ||||||||||||    
T  20126674 gttagggggtcaaaatcgcaacttcttaaaacatagggggggccaaaactcctattaagccta 20126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 31874110 - 31874145
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacatagggg 70  Q
    ||||||| |||||| |||||||||||||||||||||    
T  31874110 aggggacaaaaatcgcaactttttgaaacatagggg 31874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 38973385 - 38973327
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| ||| || || |||||||||||||||||| ||| |||||||||    
T  38973385 gttagggggccaaaatc-caatttcttaaaacatagggggccaaaagtgcaattaagcct 38973327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-27; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 755987 - 755902
Alignment:
Q  6 tagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  755987 tagggggccaaaatcgaattattttagttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcct 755902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 4461760 - 4461676
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  4461760 catagggggtcaaaatcgaattattttagttaggggaccaaaatcgcaaatttttgaaacataaggggccaaaactgctattaag 4461676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 756085 - 756174
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||||||||| ||||||||||||||| ||||| || |||||||| |||||| || |||||||||| |||||||||||||||||||||||    
T  756085 catagggggccaaaatcgaattattttagttagagggccaaaatcgcaacttcttaaaacatagggagccaaaactgctattaagcctat 756174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 6e-22
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 2802976 - 2803068
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||  |||||| |  |||||||||||  ||||||||||||||||||||||||    
T  2802976 catagggggccaaaatcgaattattttagttagggggccaaaattgcaacttctgtaaacataggggatcaaaactgctattaagcctatttt 2803068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 11289275 - 11289366
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||| ||||||||||||||  ||||||| |||| |||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  11289275 catagtgggccaaaatcgaattatttaagttaggg-accagaatcgcaacttcttgaaacatagggggccaaagctgctattaagcctttttt 11289366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 6041425 - 6041508
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||| | ||||||||||||||| ||||||||| ||||||| |||||| |  |||||||||||||||||| | |||||||    
T  6041425 catagggggtcaaaatcgaattattttagttaggggatcaaaatcgcaacttctataaacatagggggccaaaaatactattaa 6041508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 6045062 - 6045145
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||| | ||||||||||||||| ||||||||| ||||||| |||||| |  |||||||||||||||||| | |||||||    
T  6045062 catagggggtcaaaatcgaattattttagttaggggatcaaaatcgcaacttctataaacatagggggccaaaaatactattaa 6045145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 35795587 - 35795646
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  35795587 gttagggggccaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcct 35795646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 6041174 - 6041089
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||| |||||||||||||||  ||| ||| | ||||||  ||||| |||||||||||||||||||||||| |||||||||    
T  6041174 catagggggccaaaatcgaattattttaattatgggtc-aaaatcgtaacttcttgaaacatagggggccaaaactgttattaagcc 6041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 6044806 - 6044721
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||| |||||||||||||||  ||| ||| | ||||||  ||||| |||||||||||||||||||||||| |||||||||    
T  6044806 catagggggccaaaatcgaattattttaattatgggtc-aaaatcgtaacttcttgaaacatagggggccaaaactgttattaagcc 6044721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 26889619 - 26889702
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||||| ||||| ||||||||| ||||||||  ||||||| |||||| || ||||||||| | | ||||||||||||||    
T  26889619 catagggggccaaaatcaaattattttagttagggggtcaaaatcgcaacttcttaaaacataggagactaaaactgctattaa 26889702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 23475672 - 23475618
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  23475672 caaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctttttt 23475618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 41602878 - 41602927
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagccta 41602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 2802722 - 2802646
Alignment:
Q  16 aaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| |||||||||| |||| ||| |||||||| |||||| || | |||||||||| ||||||||||||||| ||||    
T  2802722 aaattgaattattttagttatgggtccaaaatcgcaacttcttaatacatagggggtcaaaactgctattaaaccta 2802646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 17512155 - 17512095
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||| |||||| |||||||||||||||||| |||| |||||    
T  17512155 gttagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgccta 17512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 29340830 - 29340758
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatat 100  Q
    |||||||| ||| |||||||| ||| || || |||||||||||||||||||||||||||| ||| | ||||||    
T  29340830 ttttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctattaaacctttattatat 29340758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 45522443 - 45522507
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||||| | |||||| |||||| || |||||||||||| |||||||||| |||||||||    
T  45522443 ttttgttagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgcttttaagccta 45522507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 4695014 - 4695069
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| |||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  4695014 agggggccaaaatcacaactttttgatacttagggggccaaaactgcttttaagcc 4695069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 14170479 - 14170416
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||||| |||||||| |||||| || |||||||||||| ||||||||| ||||||||| ||||    
T  14170479 ttagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaagcctttttt 14170416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 23936337 - 23936282
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||| |||||    
T  23936337 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaa 23936282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 26889333 - 26889291
Alignment:
Q  50 caactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  26889333 caacttctggaaacatagggggccaaaactgctattaagccta 26889291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 35795257 - 35795219
Alignment:
Q  50 caactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  35795257 caactttttgaaacatagggggccaaaactgcaattaag 35795219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 45308512 - 45308454
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||  ||||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  45308512 gttaggggttcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 45308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 23702180 - 23702119
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    ||||||||||||||||  |||||| |||||  || ||||| |||||||||||||||||||||    
T  23702180 ttaggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagcctatt 23702119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 31947912 - 31947851
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| |||||||||||    
T  31947912 gttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctat 31947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 45163716 - 45163761
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  45163716 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 45163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 23702385 - 23702449
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| | |||||| |||||||| ||||  |||||||| ||||||||||||||||||    
T  23702385 tttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 29196614 - 29196678
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||| |||||| |||| |||||| || ||| ||||||||||||||||| |||||| ||||    
T  29196614 ttttgttagaggaccataatcgcaacttcttaaaatatagggggccaaaactgttattaaaccta 29196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 8409817 - 8409879
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||||| |||||||| |||||| || |||||||  ||| |||||||||||||||||||    
T  8409817 ttttgttaggggcccaaaatcgcaacttcttaaaacata-tgggtcaaaactgctattaagcct 8409879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 1657640 - 1657706
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  1657640 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 1657706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 6335583 - 6335649
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| |||| ||||||||  ||| ||||||| |||||| ||| ||||||||||||||||    
T  6335583 gttaggggtccataatcgcaacttttgaaaagataggggtccaaaagtgcaattaagcctattttat 6335649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 91
Target Start/End: Complemental strand, 8409516 - 8409486
Alignment:
Q  61 aacatagggggccaaaactgctattaagcct 91  Q
    |||||||||||||||||||||||||||||||    
T  8409516 aacatagggggccaaaactgctattaagcct 8409486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 14032094 - 14032028
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  14032094 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 14032028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 20788092 - 20788034
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| || |||||||  |||||| ||||||||||||||||||||| ||| ||||||||    
T  20788092 gttagagggccaaaattgcaacttattgaaacatagggggccaaaagtgcaattaagcc 20788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 27453534 - 27453592
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||| |||||||| ||||||||||||||||||||||  |||| |||  ||||||||||    
T  27453534 agggggccaaaatcacaactttttgaaacatagggggtgaaaagtgcatttaagcctat 27453592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 28349558 - 28349624
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| |||||| |||||||||||||    
T  28349558 tttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcctat 28349624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 13190938 - 13190975
Alignment:
Q  40 accaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  13190938 accaaaatctcaactttttgaaacttagggggctaaaa 13190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 17070970 - 17070901
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||| ||||||  |||||  || ||||| |||||||||||||||||| ||||    
T  17070970 ttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcctttttt 17070901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 17577302 - 17577371
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||| ||||||  |||||  || ||||| |||||||||||||||||| ||||    
T  17577302 ttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcctttttt 17577371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 18929364 - 18929295
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    |||||||||| |  ||||||||||||||||||| |  || | |||||| ||||||||||| |||||||||    
T  18929364 ttttgttaggaggtcaaaatctcaactttttgataattaagaggccaatactgctattaaacctatttta 18929295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 33947102 - 33947041
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| ||| ||||||||||||| |||| ||||||| |||||| | | |||||||||||    
T  33947102 gttaggggtccataatctcaacttttggaaagataggggtccaaaagtacaattaagcctat 33947041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 1003801 - 1003860
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||  |||||||  |||||| ||||||||||||||| |||||||| |||||||||||    
T  1003801 gttagggagccaaaattgcaacttcttgaaacataggggg-caaaactgttattaagccta 1003860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 8951098 - 8951038
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||| |||||| || ||||||||| ||| |||| ||| ||||| ||||    
T  8951098 gttaggggaccaaaatcacaacttcttaaaacataggaggctaaaagtgcaattaaaccta 8951038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 9498971 - 9498907
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||  ||||||| ||||||  ||| || |||||||||||||||| |||||||||||    
T  9498971 ttttgttatggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagccta 9498907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 14170704 - 14170740
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaact 79  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  14170704 aaaatctcaacttcttgaaatatagggggccaaaact 14170740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 16982689 - 16982621
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattt 95  Q
    ||||| |||||||||||||||  ||||||  |||||  |||||||  ||||||||||| ||||||||||    
T  16982689 tttttcttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagcctattt 16982621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 18650980 - 18650944
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||| |||||| |||||||||||||||||||||    
T  18650980 ccaaaatcgcaacttcttgaaacatagggggccaaaa 18650944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 25897053 - 25896993
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||||||| |||||||| |||||||   |||  |||||||| ||||||||||||||    
T  25897053 tttttgttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 32498435 - 32498376
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| ||||||||||    
T  32498435 gttagggg-ccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 32498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 34602069 - 34602033
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacataggggg 71  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  34602069 agggggccaaaatcgcaactttttgaaacataggggg 34602033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 37813225 - 37813161
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| ||||||||  || ||| |||||  |||||||| ||||||||||||||||||    
T  37813225 tttttcttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagcct 37813161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 12278893 - 12278834
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||  |||||||| |||||| || |||||||||||||||||| | | |||||||||    
T  12278893 gttagggatccaaaatcgcaacttcttaaaacatagggggccaaaagtacaattaagcct 12278834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 18092960 - 18092913
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| |||||| ||| ||| |||||||| |||||||||||||||    
T  18092960 ccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaag 18092913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 1e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 41148251 - 41148163
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||| ||||||||||||||| |||||||| | ||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  41148251 catagggggccaaaatcgaattattttagttagggggctaaaatcggaacttcttgaaacatagggggccaaaactgctattaagccta 41148163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 41148533 - 41148615
Alignment:
Q  9 ggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| ||||| ||||||||| ||||||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||    
T  41148533 ggggccaaaatcaaattattttagttaggggaccaaaatcacaacttcttaaaatatagggggccaaaactgctattaagcct 41148615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 53831210 - 53831152
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  53831210 gttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaactgctattaagcc 53831152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 53578883 - 53578971
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| || ||||| ||||||||| |||| ||| | |||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  53578883 cataggggaccaaaatcaaattattttagttaaggggctaaaatcgcaacttcttaaaacatagggggccaaaacggctattaagccta 53578971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 19537008 - 19536945
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| |||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||    
T  19537008 tttttcttaggggaccaaaatcacaactttgggaaacatagggggacaaaactgctattaagcc 19536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 30064060 - 30064002
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  30064060 gttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaacttctattaagcc 30064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 13388218 - 13388159
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  13388218 gttagggg-ccaaaatctctacttcttgaaacatagggggccaaaactgcaattaagccta 13388159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 35830302 - 35830361
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||| |||||| |||||| |||||| ||||| |||||||||||||||||||||||    
T  35830302 ttaggggacaaaaatcacaacttcttgaaatataggaggccaaaactgctattaagccta 35830361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 5547679 - 5547613
Alignment:
Q  24 ttatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||| |||||| | ||||||||||||||| |||||| | || ||||||||||||||||||||||    
T  5547679 ttattttagttaggaggccaaaatctcaacttcttgaaatacagagggccaaaactgctattaagcc 5547613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 3369909 - 3369846
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||||| |||||||| |||||| |||| || |||||||| ||||||| ||||||||||    
T  3369909 ttttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcct 3369846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 26858402 - 26858343
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||||| ||| |||||||||    
T  26858402 gttaggggaccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaagcct 26858343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 44271484 - 44271429
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||| ||| |||||    
T  44271484 gttaggggaccaaaatcacaacttattgaaatatagggggccaaaaatgcaattaa 44271429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 6207441 - 6207503
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatattag 103  Q
    |||||||| |||||||  ||||  |||||||| ||||||||||||||||||||||||| ||||    
T  6207441 ccaaaatcacaactttaggaaaattagggggctaaaactgctattaagcctattttattttag 6207503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 14449336 - 14449276
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| ||||||| |||||||||||||||  |||||  |||||||| ||||||||||||||    
T  14449336 tttttcttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 21552909 - 21552973
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||| ||  |||||||  ||||| ||||||||||||  ||||||||||||||||||||||    
T  21552909 ttttgttagagggtcaaaatcgtaacttcttgaaacataggttgccaaaactgctattaagccta 21552973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 35383828 - 35383764
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| ||||||  |||||  |||||||| ||||||||||||||||||    
T  35383828 ttttttttagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcct 35383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 37831655 - 37831595
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| ||||||| |||||||| |||||| || |||| |||||||| ||||||||||||||    
T  37831655 tttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 47742289 - 47742229
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| ||||||  ||||||||||| || ||||||||||||||| ||||    
T  47742289 gttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaaaccta 47742229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 39907339 - 39907406
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttata 99  Q
    ||||||||||||||||   |||||||  ||| ||||||| |||||| ||| |||||||||||||||||    
T  39907339 gttaggggaccaaaattgtaacttttaaaaagataggggaccaaaagtgcaattaagcctattttata 39907406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 5548018 - 5548064
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| |||||| || ||||||||| ||||||||||||||||||    
T  5548018 ccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaa 5548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 11824245 - 11824179
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttata 99  Q
    |||||| ||||||||| |||||||  ||||  |||||||  |||||||||||||||||||| |||||    
T  11824245 ttagggaaccaaaatcacaactttaggaaagttagggggttaaaactgctattaagcctatattata 11824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 23315633 - 23315699
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  23315633 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 23315699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 30064356 - 30064418
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||  |||||||| |||||| || |||| ||||| ||||||||| ||||||||||||||    
T  30064356 gttagggagccaaaatcgcaacttcttaaaacttagggagccaaaactactattaagcctatt 30064418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 1420795 - 1420860
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| ||||||||||||||||  ||||||  ||||  || ||||| |||||||||||||||||||    
T  1420795 tttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagccta 1420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 12719697 - 12719766
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| ||||||| ||||||||  ||||  |||||||  |||||||||||||||||| ||||    
T  12719697 tttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcctttttt 12719766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 29860710 - 29860653
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||||| |||||| ||||||||  ||| |||||||||||||| ||| |||||||    
T  29860710 gttaggggactaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagc 29860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 39907003 - 39906942
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||||||||||||||| ||||||||  ||| || || |||||||| ||| |||||||||||    
T  39907003 gttaggggaccaaaatcacaacttttgaaaagattggaggccaaaaatgcaattaagcctat 39906942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 1140621 - 1140681
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacata-gggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||| |||||||||| ||||||||||| |||  ||||||||    
T  1140621 gttaggggtccaaaatcgcaacttcttgaaacataggggggccaaaagtgcatttaagcct 1140681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 14578478 - 14578426
Alignment:
Q  50 caactttttgaaacatagggggccaaaactgctattaagcctattttatatta 102  Q
    |||||||| |||| ||||||| |||||| ||| |||||||||||||| |||||    
T  14578478 caacttttggaaagataggggtccaaaagtgcaattaagcctattttttatta 14578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 14816863 - 14816923
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacataggggg-ccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||| | ||||||||||||| |||||| ||| |||||||||    
T  14816863 gttaggggtccaaaatcgcaacttctagaaacatagggggaccaaaagtgcaattaagcct 14816923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 15058869 - 15058833
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||| |||| |||||||||||||||||||||||    
T  15058869 ccaaaatcgcaacattttgaaacatagggggccaaaa 15058833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 23759624 - 23759560
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||| ||| |||||||| ||||||| |||||  |||||||| |||||| |||||||||||    
T  23759624 tttttcttaaggggccaaaatcgcaactttatgaaagttagggggcgaaaactactattaagcct 23759560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 24415329 - 24415393
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||    
T  24415329 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 24415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 29860836 - 29860892
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| |||||||| |||||||| |||| || ||||||||||| ||| ||||||    
T  29860836 gttagggggccaaaatcgcaacttttggaaagatggggggccaaaagtgcaattaag 29860892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 30627025 - 30627089
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||  |||||||  |||||||||| || |||||||  |||||||||||||||||||    
T  30627025 ttttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctattaagccta 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 38828557 - 38828505
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| |||||| || |||||||| ||||||||| ||| |||||||||||    
T  38828557 ccaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcctat 38828505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 47821533 - 47821473
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||| || | ||||||||||||| ||||||| |||||| ||| ||||||||||    
T  47821533 gttagggggccataaccgcaactttttgaaagataggggtccaaaagtgcaattaagccta 47821473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 51696784 - 51696844
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||||||||||||||    
T  51696784 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgctattaagccta 51696844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 1186716 - 1186657
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| ||||||||  |||  ||||||||||||| ||| |||||||||    
T  1186716 gttagggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcct 1186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 13306918 - 13306973
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    ||||||| ||||||||  ||| |||||||||||||| ||| ||||| |||||||||    
T  13306918 caaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaacctatttta 13306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 28291909 - 28291964
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| ||||||||||| |||||||| |||| ||||||||| |||| ||| |||||    
T  28291909 gttagaggaccaaaatcgcaacttttggaaagatagggggctaaaagtgcaattaa 28291964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 35901808 - 35901863
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||  |||||||| |||||||| |||||||||||| |||||| ||| |||||    
T  35901808 gttagggagccaaaatcgcaacttttagaaacataggggaccaaaagtgcaattaa 35901863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 36413974 - 36414021
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||| |||||||| |||| |||||||||||||| ||| ||||||||    
T  36413974 aaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 36414021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 47742600 - 47742655
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| | ||||||  ||||| || |||||||||||| |||||||||||||||    
T  47742600 gttagggggctaaaatcgtaacttcttaaaacatagggggtcaaaactgctattaa 47742655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 49804348 - 49804410
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||| |||||||| ||||||| |||||| |||||| ||||||| | |||| |||||||||||||    
T  49804348 tttttttaggggatcaaaatcgcaacttcttgaaatataggggtc-aaaattgctattaagcct 49804410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 12075042 - 12074958
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    ||||||||||| ||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  12075042 catagggggccaaaatcgaattattttagttagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaag 12074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 12075244 - 12075328
Alignment:
Q  6 tagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| |||||| |  ||||||||||||||||||||||||||||||||    
T  12075244 tagggggcc-aaatcgaattattttagttagggggccaaaatcgcaacttctgtaaacatagggggccaaaactgctattaagcct 12075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 3815045 - 3815119
Alignment:
Q  25 tatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttata 99  Q
    |||||| |||||||| |||||||| |||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  3815045 tattttagttagggggccaaaatcgcaacttcttgaaacataggggttcaaaactgctattaagcctattttata 3815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 37008279 - 37008218
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||    
T  37008279 ttttgttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 3814818 - 3814757
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| |||||||| |||||| |||||||||||||||| ||| ||||||||||||||||    
T  3814818 gttagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagcctat 3814757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 23953083 - 23953160
Alignment:
Q  9 ggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctatta 86  Q
    |||||| ||||| ||||||||| |||  |||  ||||||| |||||| ||||||||||||||||||||||||||||||    
T  23953083 ggggccaaaatcaaattattttagtttaggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctatta 23953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 367171 - 367239
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||||||| |||||||| |||| | |||||| |||||||  ||||||||||||||||||||||||    
T  367171 ttttgttagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagcctatttt 367239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 41915779 - 41915838
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||||||| |||||| |||||| ||||||| |||||||||||||||||||||    
T  41915779 ttaggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagccta 41915838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 2350076 - 2350150
Alignment:
Q  16 aaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||||||| ||||||||  ||||||| |||||| || |||||||| || ||||||||| |||||||||    
T  2350076 aaatcgaattattttagttagggggtcaaaatcgcaacttcttaaaacatagaggaccaaaactgttattaagcc 2350150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 3612445 - 3612503
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||||||||||||| ||||||| |||||| | ||||||||||||||||||    
T  3612445 ttaggagaccaaaatctcaacttcttgaaacttaggggactaaaactgctattaagcct 3612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 46895495 - 46895437
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| ||| ||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  46895495 gttagaggatcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcc 46895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 51549396 - 51549458
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||| |||||||| |||||| ||||||| ||||||||||||| ||| ||||||||||||    
T  51549396 gttaggggtccaaaatcgcaacttcttgaaacttagggggccaaaattgcaattaagcctatt 51549458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 46895806 - 46895855
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  46895806 caaaatcgcaacttcttgaaacatagggggccaaaactgcaattaagcct 46895855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 40877001 - 40877057
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| |||||||| |||||| ||| ||||||||||||||||||||| ||||||    
T  40877001 gttagggggccaaaatcgcaacttcttggaacatagggggccaaaactgcaattaag 40877057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 366952 - 366885
Alignment:
Q  24 ttatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| ||||||||   ||||||  ||||| || ||||||||||||||||||||||||||||||||    
T  366952 ttattttggttagggggttaaaatcataacttcttaaaacatagggggccaaaactgctattaagcct 366885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 7058379 - 7058437
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||  ||||||||    
T  7058379 gttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaagtgaaattaagcc 7058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 43117312 - 43117258
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||| ||||||||||| |||||| |||||||||||| ||| ||||||||||||||    
T  43117312 ttagaggaccaaaatcgcaacttcttgaaacataggtggctaaaactgctattaa 43117258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 13344431 - 13344491
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||||| ||| ||||| ||||    
T  13344431 gttaggggaccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaaaccta 13344491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 49696932 - 49696980
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  49696932 aaaatcacaacttcttgaaacatagggggccaaaaatgcaattaagcct 49696980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 41611299 - 41611244
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| |||||    
T  41611299 gttagggggccaaaatcgcaacttttggaaaaatagggggccaaaagtgcaattaa 41611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 25085447 - 25085397
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||| ||||||| |||||  |||||||| |||||||||||||||||||    
T  25085447 caaaatcgcaactttatgaaagttagggggcgaaaactgctattaagccta 25085397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 35580787 - 35580737
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||| |||||||||||||| ||| |||||||||    
T  35580787 ccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 35580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 44743735 - 44743793
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatat 100  Q
    ||||||| |||||| | ||||||| |||||||||||||| |||||| ||||||| ||||    
T  44743735 caaaatcgcaacttctggaaacattgggggccaaaactgatattaaacctatttaatat 44743793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 7196725 - 7196676
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||| |||||| |||| ||| ||||||||||||||||||    
T  7196725 ccaaaatcgcaacttcttgaaatatagagggtcaaaactgctattaagcc 7196676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 7196977 - 7197030
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattt 95  Q
    ||||||| |||||| || ||||||| |||| | |||||||||||||||||||||    
T  7196977 caaaatcgcaacttcttaaaacataaggggtcgaaactgctattaagcctattt 7197030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 25486479 - 25486536
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatat 100  Q
    |||||| ||||||  |||||  |||||||| ||||||||||||||||||| |||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaatttatat 25486536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 3377564 - 3377500
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| |||||||   |||  |||||||| ||||||||||||||||||    
T  3377564 tttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 3377769 - 3377825
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||    
T  3377769 tagggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 7489567 - 7489511
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| |||||||  |||||||| |||| |||||||||||||| ||| ||||||    
T  7489567 gttagggggccaaaattacaacttttggaaagatagggggccaaaagtgcaattaag 7489511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 35580924 - 35580984
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||| | |||||||| ||||||||  ||| |||||||||||||| ||| ||||||||||    
T  35580924 gttaggaggccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaagccta 35580984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 37696543 - 37696599
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    |||||||  ||||||||  ||| |||||||||||||| ||| |||||||||||||||    
T  37696543 ccaaaattgcaacttttgaaaatatagggggccaaaagtgcgattaagcctatttta 37696599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 50503759 - 50503699
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||| || ||||||||||| |||||| ||  ||||||||||    
T  50503759 gttagggggccaaaatcgcaacttcttaaaacataggggaccaaaagtgaaattaagccta 50503699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 4059578 - 4059535
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||| |||||||| |||| |||||||||||||||||| ||||    
T  4059578 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaa 4059535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 15911730 - 15911671
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| | |||||| ||||||||  ||| |||||||||||||| ||| |||||||||    
T  15911730 gttagggggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 15911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 16878933 - 16878976
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||||||||||||||||| ||||||||| |||| ||| ||||    
T  16878933 taggggaccaaaatctcaacattttgaaacttaggtggcgaaaa 16878976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 28552361 - 28552318
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||||    
T  28552361 taggggaccaaaatcgcaacattttgaaacttagggggcgaaaa 28552318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 46039146 - 46039201
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||||||||  ||| |||||||||||||| ||| |||||||| |||||    
T  46039146 ccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaagccaatttt 46039201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 50379962 - 50380021
Alignment:
Q  22 aattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgc 81  Q
    |||| ||||| |||||||||||||||| || |||| |||||  ||||||| |||||||||    
T  50379962 aattttttttattaggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgc 50380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-22; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 8030210 - 8030125
Alignment:
Q  6 tagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||  |||||||||||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||||||||    
T  8030210 tagggggccataatcgaattattttagttaggggaccaaaattgcaacttctgtaaacatagggggccaaaactgctattaagcct 8030125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 6e-22
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 4856792 - 4856709
Alignment:
Q  6 tagggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||| ||||||||||||||| |||||||| | |||||| |||||| |||||||||| |||||||||||||||||||||||    
T  4856792 tagggggccaaaatcgaattattttagttaggggtc-aaaatcgcaacttcttgaaacataaggggccaaaactgctattaagcc 4856709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 6e-22
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 14816053 - 14816117
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  14816053 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctatttt 14816117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 35500086 - 35500039
Alignment:
Q  44 aaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35500086 aaatcacaactttttgaaacatagggggccaaaactgctattaagcct 35500039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 14815756 - 14815698
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  14815756 gttaagggaccaaaaccgcaacttcttgaaacatagggggccaaaactgctattaagcc 14815698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 12802467 - 12802519
Alignment:
Q  39 gaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  12802467 gaccaaaatcgcaacttcttgaaacatagggagccaaaactgctattaagcct 12802519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 20650432 - 20650368
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  20650432 ttttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagccta 20650368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 35500343 - 35500407
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||||| |||||||| |||||| |||||||||||||  |||||||| ||||||||||||    
T  35500343 ttttgttagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactattaagccta 35500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 19206205 - 19206136
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||| ||||||| |||||  |||||||| |||| ||||||||||||||||||    
T  19206205 ttttttttagggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagcctatttt 19206136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 39672677 - 39672737
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||| |||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||    
T  39672677 gttatgggaccaaaatcacaacttcttgaaacata-ggggccaaaactgcaattaagcctat 39672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 9780941 - 9781000
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||| ||||||| ||||||||| ||||||| |||||||||||||| |||||||||    
T  9780941 gttagaggatcaaaatcgcaactttttaaaacataaggggccaaaactgcaattaagcct 9781000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 14983956 - 14984015
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||||||||||| |||||| || ||||||| |||||||||| ||| |||||||||    
T  14983956 gttaggggaccaaaatcgcaacttcttaaaacatacggggccaaaagtgcaattaagcct 14984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 15023089 - 15023152
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| |||||||  ||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  15023089 tttttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 29370778 - 29370719
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||| |||||| ||||||| |||||| || |||||||||||||||||||| |||||||    
T  29370778 ttttgtcaggggatcaaaatcgcaacttcttaaaacatagggggccaaaacttctattaa 29370719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 36286409 - 36286468
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| |||||||||    
T  36286409 gttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 36286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 10857397 - 10857339
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| ||||||||    
T  10857397 gttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 10857339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 11363940 - 11363882
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  11363940 gttagggagccaaaatcgcaacttcttgaaacatagggggccaaaaatgcaattaagcc 11363882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 32661690 - 32661748
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| ||||||||    
T  32661690 gttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 32661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 52295 - 52356
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| |||||||| ||| || || |||||||||||||||||| ||| |||||||||||    
T  52295 gttagggggccaaaatcgcaaattcttaaaacatagggggccaaaagtgcaattaagcctat 52356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 17850490 - 17850547
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||| | |||||||| |||||| || |||||||||||||||||||| |||||||||    
T  17850490 gttaggaggccaaaatcgcaacttcttaaaacatagggggccaaaactactattaagc 17850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 34600596 - 34600543
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||| |||||||| |||| |||||||||||||| ||| ||||||||||||    
T  34600596 ccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctatt 34600543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 12542412 - 12542476
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| |||||||| ||||||||  ||| |||| ||||||||| ||| ||||||||||||||    
T  12542412 gttagggggccaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagcctatttt 12542476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 21358356 - 21358420
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| ||||||||||||||||||    
T  21358356 tttttcttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcct 21358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 21631876 - 21631816
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||| ||| ||||| ||||    
T  21631876 gttagggggccaaaatcgcaacttcatgaaacatagggggccaaaagtgcaattaaaccta 21631816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 41072083 - 41072151
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatat 100  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||||    
T  41072083 gttaggggtccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagcctattttatat 41072151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 44078545 - 44078605
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||| ||||||||| |||||| || |||||||||||||||||| ||| ||||| ||||    
T  44078545 gttagggaaccaaaatcgcaacttcttaaaacatagggggccaaaagtgcaattaaaccta 44078605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 2755205 - 2755264
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| |||||||||    
T  2755205 gttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 2755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 28719375 - 28719316
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||| || ||||||||||||||||||  || |||||||||    
T  28719375 gttagggggccaaaatcgcaacttcttaaaacatagggggccaaaagggcaattaagcct 28719316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 30559241 - 30559280
Alignment:
Q  49 tcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  30559241 tcaacttcttgaaacatagggggcgaaaactgctattaag 30559280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 34679341 - 34679404
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| ||||||| |||||||| ||||||  |||||  |||||||| |||||||||||||||||    
T  34679341 ttttttttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 5470586 - 5470652
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| ||||||||||| ||||||||    
T  5470586 ttttttttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagcctat 5470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 22333359 - 22333393
Alignment:
Q  60 aaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||||||||||||||||||||| ||||||||    
T  22333359 aaacatagggggccaaaactgctattcagcctatt 22333393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 31226913 - 31226855
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctatta 86  Q
    ||||||||  || |||| ||||||||||| ||| || ||||||||||||||||||||||    
T  31226913 ttttgttacagggccaagatctcaactttctgatacttagggggccaaaactgctatta 31226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 5362238 - 5362169
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||| ||| |||||||| ||||||| |||||  |||||||| |||| | ||||||||||||||||    
T  5362238 tttttcttatggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagcctatttt 5362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 14489462 - 14489526
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| ||||||| |||||||| ||||||  |||||  |||||||| |||||||||||||||||||    
T  14489462 tttttcttagggg-ccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagccta 14489526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 28451696 - 28451640
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| ||| |||||||    
T  28451696 gttagggg-ccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaagc 28451640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35180538 - 35180598
Alignment:
Q  29 tttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||||||||| |||||||| |||||||| |||| ||| |||||||||| ||| ||||||||    
T  35180538 tttgttagggggccaaaatcgcaacttttggaaagata-ggggccaaaagtgcaattaagcc 35180598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 4857024 - 4857056
Alignment:
Q  60 aaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||||||||||||||||||||||||    
T  4857024 aaacatagagggccaaaactgctattaagccta 4857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 12542197 - 12542141
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaag 88  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| ||||||    
T  12542197 gttagggggccaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaag 12542141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 14489277 - 14489213
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||| ||| |||||||| |||||||| ||||  ||| |||| ||||||||||||||||||    
T  14489277 tttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcct 14489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 19256844 - 19256908
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||    
T  19256844 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 19256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 21633323 - 21633383
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||||| |  |||||| || |||||||||||||||||| ||| ||||||||||    
T  21633323 gttaggggtccaaagttgcaacttcttaaaacatagggggccaaaagtgcaattaagccta 21633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23993911 - 23993975
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||||| |||||||  |||||| || | || ||||| ||||||||||||||||| ||||    
T  23993911 ttttgttagggggccaaaattgcaacttcttaatacttagggagccaaaactgctattaaaccta 23993975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 28733239 - 28733299
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| ||| |||||||| ||||||||| ||||||||||| |||||| | | ||||||||||    
T  28733239 gttaaggggccaaaatcgcaactttttaaaacataggggaccaaaaatacaattaagccta 28733299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 31025933 - 31025873
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| || |||||||| ||||||||  ||| |||||||||||||| ||| ||||||||||    
T  31025933 gttagagggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 31025873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 34100796 - 34100764
Alignment:
Q  65 tagggggccaaaactgctattaagcctatttta 97  Q
    |||||||| ||||||||||||||||||||||||    
T  34100796 tagggggctaaaactgctattaagcctatttta 34100764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 44617988 - 44618052
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||| |||||||||||| |||||| ||||||  ||| |||  ||||||||||||||||||    
T  44617988 tttttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcct 44618052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 3368721 - 3368670
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||||||||  ||| |||||||||||||| ||| ||||||||||    
T  3368721 ccaaaatcgcaacttttataaagatagggggccaaaagtgcaattaagccta 3368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 20662571 - 20662516
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    ||||||||||||||| |||||| || |||| |||||||  |||||| |||||||||    
T  20662571 taggggaccaaaatcgcaacttctttaaacttagggggttaaaactactattaagc 20662516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 25411598 - 25411567
Alignment:
Q  65 tagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| |||||||||||||||||||||||    
T  25411598 tagggggctaaaactgctattaagcctatttt 25411567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 32661462 - 32661403
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||  ||||||| ||||||||  ||| |||||||||||||| ||| |||||||||    
T  32661462 gttagggggacaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 32661403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 36177044 - 36176981
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| ||||||| | |||||| ||||||  |||||| ||| |||| |||||||||||||||||    
T  36177044 ttttttttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 43890158 - 43890103
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||| |||||||||||| |||||| || ||||||||||| |||||| ||| |||||    
T  43890158 gttaagggaccaaaatcgcaacttcttcaaacataggggaccaaaagtgcaattaa 43890103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 46; Significance: 9e-18; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 46; E-Value: 9e-18
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 1534 - 1465
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  1534 tttttcttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcctatttt 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-17; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 3354937 - 3355001
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||||||| |||||| |||| || |||||||||||| |||||||||||||||    
T  3354937 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 3355001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 17258183 - 17258247
Alignment:
Q  29 tttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| ||| |||||||||||    
T  17258183 tttgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcctat 17258247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 53255021 - 53254952
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatatt 101  Q
    ||||| || |||||||| |||||| |||||||||||||||||||||||| ||||||||| || |||||||    
T  53255021 gttagagggccaaaatcgcaacttcttgaaacatagggggccaaaactgttattaagccaatattatatt 53254952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 53255280 - 53255341
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    |||||||| |||||||| |||||| || ||||||||| ||||||||||||||||||||||||    
T  53255280 gttagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagcctat 53255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 32831484 - 32831543
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||  ||||||||||    
T  32831484 gttaggggaccaaaattgcaacttttttaaacatagggggccaaaactattattaagcct 32831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 40988656 - 40988597
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| ||| |||||||||    
T  40988656 gttaggggaccaaaatcgcaacttcttgaaacatagggagccaaaagtgcaattaagcct 40988597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 2181373 - 2181315
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  2181373 gttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 2181315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 32772036 - 32772081
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  32772036 gttaggggaccaaaatcacaacttcttgaaacatagggggccaaaa 32772081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 6128491 - 6128562
Alignment:
Q  15 gaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||||||||||| |||||||| | |||||| |||||| || ||| |||| |||||||||||||||||||    
T  6128491 gaaatcgaattattttagttaggggtc-aaaatcgcaacttcttaaaatatagtgggccaaaactgctattaa 6128562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 17256626 - 17256559
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttata 99  Q
    |||||||| |||||||  |||||| |||||| |||||||||||||| ||| |||||| ||||||||||    
T  17256626 gttagggggccaaaattgcaacttcttgaaatatagggggccaaaagtgcaattaagtctattttata 17256559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 51224984 - 51224921
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattt 95  Q
    |||||||| |||||||| |||||| |||||||||||| |||||||| ||| || ||||||||||    
T  51224984 gttagggggccaaaatcgcaacttcttgaaacataggaggccaaaagtgcaatcaagcctattt 51224921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 32831199 - 32831161
Alignment:
Q  51 aactttttgaaacatagggggccaaaactgctattaagc 89  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  32831199 aacttcttgaaacatagggggccaaaactgctattaagc 32831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 33944865 - 33944927
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    ||||||||  ||||||| |||||| ||||||||||| ||||||||| ||| ||||||||||||    
T  33944865 gttaggggttcaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcctatt 33944927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 40989655 - 40989713
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| ||||| || |||||| ||||||||||||||||||||| ||| |||||||||    
T  40989655 ttaggggtccaaactcacaacttcttgaaacatagggggccaaaagtgcaattaagcct 40989713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 16883787 - 16883852
Alignment:
Q  29 tttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    |||||||||||  ||||||| ||||||| ||| || ||||||||||||| | ||||||||||||||    
T  16883787 tttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaaatactattaagcctatt 16883852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 37755193 - 37755250
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||| | |||||| ||||||  |||||||||||||||||||||||| |||||||    
T  37755193 gttagggggctaaaatcgcaacttcatgaaacatagggggccaaaactgcaattaagc 37755250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 49579164 - 49579225
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||||||||| |||||| ||||||| ||| || || |||| |||||||||||||||||    
T  49579164 ttttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctattaagc 49579225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 51315735 - 51315800
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||||    
T  51315735 tttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 51315800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 46934097 - 46934033
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| | |||||| ||||||||  ||| |||||||||||||| ||| ||||||||||||||    
T  46934097 gttagggggctaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctatttt 46934033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 46934243 - 46934303
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| ||| |||| |||||||| |||| |||||||||||||| ||| ||||||||||    
T  46934243 gttagggggccataatcgcaacttttggaaagatagggggccaaaagtgcaattaagccta 46934303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 50380212 - 50380152
Alignment:
Q  33 ttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||||| |||||||| |||||| || |||||||| ||||||||| ||| |||||||||||    
T  50380212 ttagggggccaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcctat 50380152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 1807436 - 1807487
Alignment:
Q  40 accaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||||| ||| || || ||| ||||||||||||||||||||||||||||    
T  1807436 accaaaatcgcaaattcttaaaatatagggggccaaaactgctattaagcct 1807487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 3193032 - 3193099
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatt 94  Q
    ||||| |||||||  ||||||| |||||| ||||||  |||||||  |||||||||||||||||||||    
T  3193032 tttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagcctatt 3193099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 8241230 - 8241265
Alignment:
Q  4 catagggggccgaaatcgaattatttttgttagggg 39  Q
    ||||||||||||||||||||||||||| ||||||||    
T  8241230 catagggggccgaaatcgaattattttagttagggg 8241265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 51315550 - 51315519
Alignment:
Q  65 tagggggccaaaactgctattaagcctatttt 96  Q
    ||||||||||||||||||||||||||||||||    
T  51315550 tagggggccaaaactgctattaagcctatttt 51315519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 8240629 - 8240599
Alignment:
Q  60 aaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||||||||||||||||||||||    
T  8240629 aaacatagggggccaaaactgctattaagcc 8240599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 43001880 - 43001946
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| |||||||| ||| ||||  ||| |||||||||||||| ||| ||||||||| ||||||    
T  43001880 gttagggggccaaaatcgcaatttttaaaaagatagggggccaaaagtgcaattaagccttttttat 43001946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 44177346 - 44177280
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  44177346 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 44177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 44184030 - 44183964
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  44184030 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 44183964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 44895707 - 44895637
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatatta 102  Q
    |||||||| ||| |||| ||||||||  ||| ||||||| |||||| ||| |||||||||||||| |||||    
T  44895707 gttaggggtccataatcgcaacttttaaaaagataggggtccaaaagtgcaattaagcctattttttatta 44895637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 54716762 - 54716832
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttatatta 102  Q
    ||||||||||||||||| ||||||||  ||| ||||| | |||||| ||| ||||||||| |||| |||||    
T  54716762 gttaggggaccaaaatcgcaacttttaaaaagataggtgaccaaaagtgcaattaagccttttttttatta 54716832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 35495208 - 35495261
Alignment:
Q  37 gggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||| |||||| |||||| ||| |||||||||| ||| ||||||||    
T  35495208 gggaccaaaatcgcaacttcttgaaatataaggggccaaaagtgcaattaagcc 35495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 36315847 - 36315790
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||  ||| |||||||    
T  36315847 gttaggggtccaaaatcgcaacttcttgaaacatagtgggccaaaggtgcaattaagc 36315790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 40410129 - 40410190
Alignment:
Q  32 gttaggggaccaaaatctcaactttttga-aacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||||| || || |||||||||||||| ||| ||||||||||    
T  40410129 gttagggggccaaaatcgcaacttttggacaagatagggggccaaaagtgcaattaagccta 40410190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 42686545 - 42686480
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| |||||||  ||||||| |||||||||||||| |||| ||  |||||||||||||| ||||    
T  42686545 tttttcttagggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgctattaaaccta 42686480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 44701866 - 44701809
Alignment:
Q  39 gaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| | |||||||| |||| |||||||||||||| ||| ||||||| ||||||    
T  44701866 gaccaaaaccgcaacttttggaaagatagggggccaaaagtgcaattaagcatatttt 44701809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 55094633 - 55094678
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  55094633 gttaggggaccaaaatcacaactttttaaaatataggtggccaaaa 55094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 20432253 - 20432189
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||||||||| || ||||||  | |||  |||||||| ||||||||||||||||||    
T  20432253 tttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct 20432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 28712712 - 28712776
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| ||||||  | |||  |||||||| ||||||||||||||||||    
T  28712712 tttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgctattaagcct 28712776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44586037 - 44586097
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| ||||||||||||||    
T  44586037 tttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 50381562 - 50381622
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||| ||| |||||||| |||||| ||||||||||||| ||||||| ||| ||| ||||||    
T  50381562 gttaagggtccaaaatcgcaacttcttgaaacatagggagccaaaagtgcaattgagccta 50381622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 53764622 - 53764574
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| |||||||| |||| |||||||||||||| ||| |||||||||    
T  53764622 aaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 53764574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 54476101 - 54476041
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||  ||||||| |||||| || ||| |||||||||||||| ||| ||||||||||    
T  54476101 gttagggggtcaaaatcgcaacttcttaaaatatagggggccaaaagtgcaattaagccta 54476041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 54716534 - 54716474
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||||||  ||||||| ||||||||  ||| |||||||||||||| ||| ||||||||||    
T  54716534 gttagggggtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagccta 54716474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 1807652 - 1807691
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatag 67  Q
    ||||||||||||||||||||| |||||| || ||||||||    
T  1807652 ttttgttaggggaccaaaatcgcaacttcttaaaacatag 1807691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 20432434 - 20432497
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    ||||| |||||||||||||||| ||||||||  |||  |||||||  |||| ||||||||||||    
T  20432434 tttttcttaggggaccaaaatcacaacttttgaaaagttagggggttaaaaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 32770709 - 32770650
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| | |||||||| |||||| |||||||||||||| ||||||  || |||||||||    
T  32770709 gttaggagtccaaaatcgcaacttcttgaaacataggggaccaaaaacgcaattaagcct 32770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 33447230 - 33447285
Alignment:
Q  35 aggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||| ||||||||| |||||| || ||||||||||| |||||| ||| ||||||||    
T  33447230 agggaaccaaaatcgcaacttcttaaaacataggggaccaaaagtgcaattaagcc 33447285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 33687666 - 33687611
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgcta 83  Q
    |||||||||||| | |||||| ||||||| ||| || ||||||||||||| |||||    
T  33687666 ttttgttagggggctaaaatcgcaactttctgatacttagggggccaaaaatgcta 33687611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 42465749 - 42465690
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||||| || | |||||||| |||| ||||||| |||||| ||| |||||||||    
T  42465749 gttaggggaccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcct 42465690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 47284547 - 47284602
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||||||||||| ||||||||  ||| |||||||| ||||| ||| |||||    
T  47284547 gttaggggaccaaaatcgcaacttttaaaaagatagggggtcaaaagtgcaattaa 47284602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 51226506 - 51226561
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||| |||||||| |||||| || ||||||||||| |||||| ||| |||||    
T  51226506 gttaggggtccaaaatcgcaacttcttaaaacataggggaccaaaagtgcaattaa 51226561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 52917592 - 52917639
Alignment:
Q  50 caactttttgaaacatagggggccaaaactgctattaagcctatttta 97  Q
    |||||||| |||| ||||||| |||||| ||| |||||||||||||||    
T  52917592 caacttttggaaagataggggcccaaaagtgcaattaagcctatttta 52917639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 54477334 - 54477389
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| |||||| || |||||||||||||||||| ||| ||||| ||| ||||    
T  54477334 ccaaaatcacaacttcttaaaacatagggggccaaaagtgcaattaatcctttttt 54477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 28574562 - 28574620
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  28574562 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 28574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 30369845 - 30369784
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||||| |||||| |||||| || ||||||| |||||||||||||||||||||||    
T  30369845 ttttgttaggggac-aaaatcgcaacttcttaaaacataaggggccaaaactgctattaagcc 30369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 9070136 - 9070189
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  9070136 aaaatcgcaacttcttgaaacatagggggccaaaaatgctattaagcctttttt 9070189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 12798774 - 12798726
Alignment:
Q  43 aaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  12798774 aaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcct 12798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 12799044 - 12799108
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||||| |||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||    
T  12799044 ttttgttaggtgaccaaaatcgcaacttcttgaaatatagagggctaaaactgctattaaaccta 12799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 2078240 - 2078186
Alignment:
Q  16 aaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggg 70  Q
    ||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||    
T  2078240 aaatcgaattattttagttagggggtcaaaatcgcaacttcttgaaacatagggg 2078186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 2539044 - 2538983
Alignment:
Q  28 ttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||| | |||||| ||||||||| ||||||||||| |||||||| ||||||||||    
T  2539044 ttttgttaggggtc-aaaatcgcaactttttaaaacataggggaccaaaactactattaagcc 2538983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 11623217 - 11623159
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||| ||| ||||||||    
T  11623217 gttagggggccaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcc 11623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 12730591 - 12730652
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctat 93  Q
    ||||||||||||||||| ||||||||  ||| ||||| |||||||| ||| |||||||||||    
T  12730591 gttaggggaccaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcctat 12730652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 22516031 - 22515967
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| |||||||| |||||| |||||||||||||| |||||| ||  ||||||||| ||||    
T  22516031 gttaggggtccaaaatcgcaacttcttgaaacataggggaccaaaagtgtaattaagcctttttt 22515967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 4037096 - 4037037
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| ||||||||  ||| |||||||||||||| ||| |||||||||    
T  4037096 gttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 4037037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 4597461 - 4597418
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||    
T  4597461 taggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 4597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 6499825 - 6499786
Alignment:
Q  16 aaatcgaattatttttgttaggggaccaaaatctcaactt 55  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  6499825 aaatcgaattattttagttaggggaccaaaatcgcaactt 6499786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 12203950 - 12203895
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||||||  ||||||| |||||| ||||||||||||||||||||| ||| |||||    
T  12203950 gttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaa 12203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 33265144 - 33265089
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    ||||| ||||||||||| |||||||| |||| |||||||||||||| ||| |||||    
T  33265144 gttagaggaccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaa 33265089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 7504887 - 7504933
Alignment:
Q  41 ccaaaatctcaactttttgaaacatagggggccaaaactgctattaa 87  Q
    |||||||  |||||| |||||| ||||||||||||||||||||||||    
T  7504887 ccaaaattgcaacttcttgaaatatagggggccaaaactgctattaa 7504933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 2173885 - 2173934
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| | |||| ||||||||||||||||||||| ||| |||||||||    
T  2173885 caaaatcgctacttcttgaaacatagggggccaaaagtgcaattaagcct 2173934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 11624301 - 11624362
Alignment:
Q  29 tttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||||||  ||||||  |||||| ||||||||||||||| ||||| ||| ||||||||    
T  11624301 tttgttaggggttcaaaattgcaacttcttgaaacatagggggtcaaaattgcaattaagcc 11624362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 4405496 - 4405560
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||    
T  4405496 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 4405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 4793832 - 4793892
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    |||||||| |||||||| |||||  ||||||||||| |||| |||| ||| ||||||||||    
T  4793832 gttaggggtccaaaatcgcaactgcttgaaacatagtgggcaaaaaatgcaattaagccta 4793892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 6261632 - 6261696
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||    
T  6261632 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 6261696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 12766465 - 12766529
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||| ||||||| |||||||| ||||||  |||||  |||||||  ||||||||||||||||||    
T  12766465 ttttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcct 12766529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 30349607 - 30349675
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattt 95  Q
    ||||| ||||||| |||||||| |||||||   |||  |||||| | ||||||||||||||||||||||    
T  30349607 tttttcttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcctattt 30349675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 11746056 - 11745997
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||||||| || | |||||||| |||| ||||||| |||||| ||| |||||||||    
T  11746056 gttaggggaccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcct 11745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 28960285 - 28960227
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| | | |||||||||    
T  28960285 gttagggg-ccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaagcct 28960227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 38; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 3702 - 3633
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||||||||    
T  3702 tttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctatttt 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 3702 - 3633
Alignment:
Q  27 tttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctatttt 96  Q
    ||||| ||||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||||||||    
T  3702 tttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctatttt 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 6692 - 6747
Alignment:
Q  37 gggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagccta 92  Q
    ||||| |||||| |||||| ||||||| |||||||| |||||||||||||||||||    
T  6692 gggactaaaatcgcaacttgttgaaacttagggggctaaaactgctattaagccta 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 34; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 1901 - 1844
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagc 89  Q
    |||||||  ||||||||||||||| |||||||||||| |||||||| ||| |||||||    
T  1901 gttagggatccaaaatctcaacttcttgaaacataggaggccaaaaatgcaattaagc 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 27911 - 27983
Alignment:
Q  8 gggggccgaaatcgaattatttttgttaggggaccaaaatctcaactttttgaaacatagggggccaaaactg 80  Q
    |||||||  |||||||||||||| |||||||| |||||||| |||||| |  ||||||| |||| ||||||||    
T  27911 gggggccataatcgaattattttagttaggggtccaaaatcgcaacttctgtaaacatatggggtcaaaactg 27983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 32265 - 32324
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||| | | |||||||||    
T  32265 gttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaagcct 32324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 32037 - 31979
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||  |||||||| |||| |||||||||||||| ||| ||||||||    
T  32037 gttagggggccaaaattgcaacttttggaaagatagggggccaaaagtgcaattaagcc 31979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 122585 - 122644
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    |||||| | |||||||| |||||||| |||| |||||||||||||| ||| |||||||||    
T  122585 gttaggaggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 122644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 31; Significance: 0.000000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 10409 - 10351
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcc 90  Q
    |||||||| |||||||  ||| || || ||||||||| |||||||||||||||||||||    
T  10409 gttagggggccaaaattgcaatttcttaaaacataggaggccaaaactgctattaagcc 10351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 81557 - 81623
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacatagggggccaaaactgctattaagcctattttat 98  Q
    |||||||| ||| || | |||||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  81557 gttaggggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctattttat 81623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 199705 - 199655
Alignment:
Q  51 aactttttgaaacatagggggccaaaactgctattaagcctattttatatt 101  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||    
T  199705 aacttcttgaaacatagggggccaaaagtgcaattaagcctaatttttatt 199655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 20156 - 20107
Alignment:
Q  42 caaaatctcaactttttgaaacatagggggccaaaactgctattaagcct 91  Q
    ||||||| | |||| ||||||||||||||||||||| ||| |||||||||    
T  20156 caaaatcgctacttcttgaaacatagggggccaaaagtgcaattaagcct 20107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 22848 - 22788
Alignment:
Q  32 gttaggggaccaaaatctcaactttttgaaacataggggg-ccaaaactgctattaagcct 91  Q
    |||||||| |||||||| |||||| | ||||||||||||| |||||| ||| |||||||||    
T  22848 gttaggggtccaaaatcgcaacttctagaaacatagggggaccaaaagtgcaattaagcct 22788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 238897 - 238949
Alignment:
Q  50 caactttttgaaacatagggggccaaaactgctattaagcctattttatatta 102  Q
    |||||||| |||| ||||||| |||||| ||| |||||||||||||| |||||    
T  238897 caacttttggaaagataggggtccaaaagtgcaattaagcctattttttatta 238949  T

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Target: scaffold0683 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 5176 - 5133
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    ||||||||||||||  |||| |||||||||||||||||| ||||    
T  5176 taggggaccaaaattgcaacattttgaaacatagggggcgaaaa 5133  T

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Target: scaffold0419 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 3017 - 2974
Alignment:
Q  34 taggggaccaaaatctcaactttttgaaacatagggggccaaaa 77  Q
    |||||| |||||||| |||| |||||||||||||||||| ||||    
T  3017 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaa 2974  T

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Target: scaffold0400 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 92
Target Start/End: Complemental strand, 8593 - 8566
Alignment:
Q  65 tagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||||||||||||||    
T  8593 tagggggccaaaactgctattaagccta 8566  T

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Target: scaffold0365 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 92
Target Start/End: Complemental strand, 9236 - 9209
Alignment:
Q  65 tagggggccaaaactgctattaagccta 92  Q
    ||||||||||||||||||||||||||||    
T  9236 tagggggccaaaactgctattaagccta 9209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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