View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5844-21 (Length: 127)
Name: Solexa-NF5844-21
Description: NF5844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5844-21 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 96; Significance: 2e-47; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 9767967 - 9768086
Alignment:
| Q |
8 |
ccttaaaccataaaccatcataaaccaaaagtgttgtgaaacatcaatagcaacaaaaccaaaagtgttactaaacataannnnnnnncaatacaaaccc |
107 |
Q |
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| T |
9767967 |
ccttaaaccataaaccatcataaaccaaaagtgttgtgaaacatcaatagcaacaaaaccaaaagtgttactaaacataattttttttcaatacaaaccc |
9768066 |
T |
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| Q |
108 |
taaaccaaaaacatggatag |
127 |
Q |
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|||||||||||||||||||| |
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| T |
9768067 |
taaaccaaaaacatggatag |
9768086 |
T |
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