View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5846-10 (Length: 134)
Name: Solexa-NF5846-10
Description: NF5846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5846-10 |
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Alignment Details
Target: chr8 (Bit Score: 109; Significance: 3e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38199555 - 38199424
Alignment:
| Q |
1 |
agagacgaaaaacacaacataagaagtaaggacaccataaaccattaagtaacttatcagcaaatatgtacaagtattgaca--caactaataggtgatt |
98 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |
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| T |
38199555 |
agagacgaaaaacacaacttaagaagtaaggacaccataaaccattaagtaacttatcagcaaatatgtacaagtatggacactcaactaatcggtgatt |
38199456 |
T |
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| Q |
99 |
atttatgttataaaaaatgaagagtaactaat |
130 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
38199455 |
atttatgttataaaaaatgaagagtaactaat |
38199424 |
T |
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