View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5846-14 (Length: 125)

Name: Solexa-NF5846-14
Description: NF5846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5846-14
Solexa-NF5846-14
[»] scaffold0610 (1 HSPs)
scaffold0610 (4-125)||(8864-8985)
[»] chr7 (26 HSPs)
chr7 (1-125)||(4440098-4440222)
chr7 (4-125)||(21674512-21674633)
chr7 (1-121)||(17923855-17923975)
chr7 (1-125)||(14936517-14936641)
chr7 (4-125)||(7824070-7824191)
chr7 (4-125)||(12368555-12368676)
chr7 (4-125)||(27107753-27107874)
chr7 (1-122)||(12193729-12193850)
chr7 (1-125)||(13353321-13353445)
chr7 (1-125)||(45146725-45146849)
chr7 (4-125)||(15364110-15364231)
chr7 (19-119)||(13378874-13378974)
chr7 (7-125)||(23641687-23641805)
chr7 (12-125)||(17145245-17145358)
chr7 (4-125)||(5432578-5432696)
chr7 (16-125)||(12687671-12687780)
chr7 (16-125)||(17307-17416)
chr7 (49-114)||(9596238-9596303)
chr7 (49-114)||(11553126-11553191)
chr7 (49-114)||(14954801-14954866)
chr7 (16-114)||(11772232-11772330)
chr7 (49-114)||(14037988-14038053)
chr7 (49-114)||(14348018-14348083)
chr7 (52-125)||(20466952-20467025)
chr7 (37-124)||(18053943-18054030)
chr7 (46-125)||(21662131-21662210)
[»] chr3 (20 HSPs)
chr3 (1-123)||(18748477-18748599)
chr3 (4-125)||(17192904-17193025)
chr3 (7-125)||(16742915-16743033)
chr3 (7-125)||(8274611-8274729)
chr3 (4-125)||(6712618-6712739)
chr3 (7-125)||(15576560-15576678)
chr3 (11-125)||(13975261-13975375)
chr3 (4-84)||(6153060-6153140)
chr3 (7-84)||(21686796-21686873)
chr3 (46-114)||(16691971-16692039)
chr3 (52-114)||(15208702-15208764)
chr3 (49-114)||(16371224-16371289)
chr3 (11-125)||(267474-267588)
chr3 (52-114)||(14876756-14876818)
chr3 (52-114)||(15247958-15248020)
chr3 (52-114)||(16492438-16492500)
chr3 (52-114)||(17489661-17489723)
chr3 (49-114)||(12498059-12498124)
chr3 (37-124)||(44777058-44777145)
chr3 (67-125)||(15016016-15016074)
[»] scaffold0554 (1 HSPs)
scaffold0554 (4-125)||(3371-3492)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-125)||(14735-14859)
[»] chr5 (16 HSPs)
chr5 (1-125)||(23503538-23503662)
chr5 (7-122)||(11210849-11210964)
chr5 (7-125)||(24581306-24581424)
chr5 (7-125)||(27011179-27011297)
chr5 (4-125)||(21937340-21937461)
chr5 (4-81)||(25244502-25244581)
chr5 (4-81)||(25308654-25308733)
chr5 (49-125)||(18775890-18775966)
chr5 (16-114)||(26738869-26738967)
chr5 (49-114)||(23573866-23573931)
chr5 (52-83)||(21984505-21984536)
chr5 (52-83)||(25423344-25423375)
chr5 (49-125)||(16065889-16065963)
chr5 (49-114)||(23440349-23440414)
chr5 (52-83)||(20798915-20798946)
chr5 (52-83)||(21498236-21498267)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-119)||(1024-1142)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-125)||(356-480)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-125)||(22906-23030)
scaffold0120 (52-80)||(6280-6308)
[»] chr6 (26 HSPs)
chr6 (1-125)||(25743200-25743323)
chr6 (7-125)||(23996293-23996411)
chr6 (4-125)||(16098095-16098216)
chr6 (2-125)||(25655528-25655651)
chr6 (7-125)||(16382491-16382609)
chr6 (7-125)||(16233254-16233372)
chr6 (4-125)||(15078479-15078600)
chr6 (7-125)||(18838026-18838144)
chr6 (4-125)||(21413053-21413174)
chr6 (9-125)||(1648904-1649020)
chr6 (1-125)||(18571696-18571820)
chr6 (5-125)||(17813773-17813891)
chr6 (49-114)||(25765450-25765515)
chr6 (49-109)||(22433930-22433990)
chr6 (52-114)||(19864743-19864805)
chr6 (49-114)||(12498082-12498147)
chr6 (49-114)||(12510754-12510819)
chr6 (52-83)||(25610024-25610055)
chr6 (49-83)||(1543244-1543278)
chr6 (52-114)||(12505411-12505473)
chr6 (52-114)||(22078851-22078913)
chr6 (16-114)||(23078525-23078623)
chr6 (49-114)||(5839379-5839444)
chr6 (49-114)||(16963527-16963592)
chr6 (52-88)||(18408106-18408142)
chr6 (52-79)||(22762618-22762645)
[»] chr4 (21 HSPs)
chr4 (4-119)||(13247832-13247947)
chr4 (4-125)||(9291016-9291137)
chr4 (4-125)||(15293127-15293248)
chr4 (1-125)||(55375325-55375449)
chr4 (1-125)||(12132376-12132500)
chr4 (7-125)||(14997497-14997615)
chr4 (7-125)||(16445185-16445303)
chr4 (1-123)||(12342830-12342952)
chr4 (30-125)||(16685435-16685530)
chr4 (19-114)||(14159684-14159779)
chr4 (49-114)||(15149761-15149826)
chr4 (49-123)||(18227201-18227275)
chr4 (49-109)||(12523873-12523933)
chr4 (49-125)||(14680748-14680824)
chr4 (52-83)||(7090655-7090686)
chr4 (52-114)||(14652500-14652562)
chr4 (52-114)||(14851124-14851186)
chr4 (49-83)||(16355200-16355234)
chr4 (49-114)||(1640180-1640245)
chr4 (52-125)||(16252203-16252276)
chr4 (49-125)||(16676458-16676534)
[»] chr8 (25 HSPs)
chr8 (7-125)||(16877511-16877629)
chr8 (4-125)||(21196915-21197036)
chr8 (1-125)||(23157421-23157545)
chr8 (1-125)||(22315438-22315562)
chr8 (7-125)||(21850753-21850871)
chr8 (7-109)||(22982699-22982801)
chr8 (4-125)||(20652746-20652867)
chr8 (13-125)||(25282378-25282490)
chr8 (49-114)||(19978225-19978290)
chr8 (7-125)||(22283243-22283369)
chr8 (52-125)||(32600391-32600464)
chr8 (52-114)||(21166998-21167060)
chr8 (49-114)||(15533638-15533703)
chr8 (42-114)||(22377904-22377976)
chr8 (42-114)||(22384079-22384151)
chr8 (49-125)||(23949167-23949243)
chr8 (16-114)||(16408470-16408568)
chr8 (52-82)||(21394326-21394356)
chr8 (52-82)||(21788819-21788849)
chr8 (49-114)||(22133499-22133564)
chr8 (49-114)||(22164649-22164714)
chr8 (49-114)||(22987459-22987524)
chr8 (49-114)||(30313602-30313667)
chr8 (42-109)||(21681921-21681988)
chr8 (23-122)||(24818048-24818147)
[»] chr2 (19 HSPs)
chr2 (7-125)||(12640432-12640550)
chr2 (5-125)||(23817564-23817684)
chr2 (1-125)||(25128459-25128583)
chr2 (7-125)||(22276091-22276209)
chr2 (4-125)||(24570178-24570299)
chr2 (9-125)||(24831702-24831818)
chr2 (4-118)||(22762079-22762193)
chr2 (49-114)||(24675312-24675377)
chr2 (4-118)||(21908803-21908915)
chr2 (16-114)||(22756985-22757083)
chr2 (52-114)||(23063900-23063962)
chr2 (49-114)||(21325821-21325886)
chr2 (47-122)||(14708902-14708977)
chr2 (16-83)||(24708004-24708071)
chr2 (52-114)||(24825840-24825902)
chr2 (49-114)||(21145585-21145650)
chr2 (53-114)||(27368391-27368452)
chr2 (4-124)||(12574166-12574286)
chr2 (66-109)||(23087278-23087321)
[»] scaffold0310 (1 HSPs)
scaffold0310 (4-125)||(14710-14831)
[»] scaffold0132 (2 HSPs)
scaffold0132 (4-125)||(43750-43871)
scaffold0132 (7-125)||(14869-14987)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-125)||(1394-1518)
[»] scaffold0551 (1 HSPs)
scaffold0551 (6-125)||(8307-8426)
[»] scaffold0225 (1 HSPs)
scaffold0225 (7-125)||(23606-23724)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-125)||(9199-9323)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-125)||(7380-7504)
[»] scaffold0162 (1 HSPs)
scaffold0162 (13-125)||(13120-13232)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-125)||(28236-28360)
[»] chr1 (13 HSPs)
chr1 (1-125)||(22135597-22135721)
chr1 (4-125)||(20831434-20831555)
chr1 (4-108)||(20914423-20914527)
chr1 (22-125)||(46518917-46519020)
chr1 (2-118)||(21202327-21202443)
chr1 (4-122)||(20184381-20184499)
chr1 (49-125)||(16078739-16078815)
chr1 (49-125)||(17045102-17045178)
chr1 (49-119)||(19106569-19106639)
chr1 (49-83)||(20250088-20250122)
chr1 (46-114)||(16369504-16369572)
chr1 (52-79)||(20137020-20137047)
chr1 (52-83)||(21747772-21747803)
[»] scaffold0692 (1 HSPs)
scaffold0692 (7-125)||(3851-3969)
[»] scaffold0066 (1 HSPs)
scaffold0066 (7-125)||(46366-46484)
[»] scaffold0021 (2 HSPs)
scaffold0021 (4-114)||(71442-71552)
scaffold0021 (4-125)||(13463-13584)
[»] scaffold0235 (1 HSPs)
scaffold0235 (4-125)||(26018-26139)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-125)||(40470-40591)
[»] scaffold0037 (1 HSPs)
scaffold0037 (7-125)||(98227-98345)
[»] scaffold0028 (3 HSPs)
scaffold0028 (4-125)||(106546-106667)
scaffold0028 (49-83)||(43408-43442)
scaffold0028 (16-83)||(8739-8806)
[»] scaffold0011 (3 HSPs)
scaffold0011 (4-125)||(121923-122044)
scaffold0011 (4-119)||(180142-180257)
scaffold0011 (52-83)||(26554-26585)
[»] scaffold0001 (1 HSPs)
scaffold0001 (4-125)||(78602-78723)
[»] scaffold0244 (1 HSPs)
scaffold0244 (1-125)||(26127-26251)
[»] scaffold0124 (1 HSPs)
scaffold0124 (9-125)||(7788-7904)
[»] scaffold0218 (1 HSPs)
scaffold0218 (7-125)||(3920-4038)
[»] scaffold0012 (3 HSPs)
scaffold0012 (7-125)||(32971-33089)
scaffold0012 (52-114)||(219438-219500)
scaffold0012 (52-83)||(229297-229328)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-125)||(24092-24215)
scaffold0008 (1-125)||(231770-231894)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-125)||(10868-10992)
[»] scaffold0507 (1 HSPs)
scaffold0507 (44-125)||(346-427)
[»] scaffold0387 (1 HSPs)
scaffold0387 (4-104)||(14370-14470)
[»] scaffold0876 (1 HSPs)
scaffold0876 (4-65)||(2828-2889)
[»] scaffold0042 (2 HSPs)
scaffold0042 (52-114)||(39840-39902)
scaffold0042 (49-114)||(65628-65693)
[»] scaffold0161 (1 HSPs)
scaffold0161 (49-114)||(712-777)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-58)||(21877-21934)
[»] scaffold0284 (1 HSPs)
scaffold0284 (49-125)||(22079-22155)
[»] scaffold0207 (1 HSPs)
scaffold0207 (52-119)||(18327-18394)
[»] scaffold0447 (2 HSPs)
scaffold0447 (67-125)||(5953-6011)
scaffold0447 (67-125)||(10567-10625)
[»] scaffold0383 (1 HSPs)
scaffold0383 (67-125)||(8562-8620)
[»] scaffold0234 (1 HSPs)
scaffold0234 (71-125)||(16211-16265)
[»] scaffold0375 (1 HSPs)
scaffold0375 (49-114)||(3737-3802)
[»] scaffold0020 (1 HSPs)
scaffold0020 (49-114)||(180440-180505)
[»] scaffold0044 (1 HSPs)
scaffold0044 (49-125)||(14572-14648)
[»] scaffold0676 (1 HSPs)
scaffold0676 (49-108)||(6243-6302)
[»] scaffold0084 (1 HSPs)
scaffold0084 (46-113)||(5445-5512)
[»] scaffold1068 (1 HSPs)
scaffold1068 (47-125)||(818-896)
[»] scaffold0476 (1 HSPs)
scaffold0476 (52-114)||(9566-9628)
[»] scaffold0106 (2 HSPs)
scaffold0106 (52-114)||(14262-14324)
scaffold0106 (49-83)||(17696-17730)
[»] scaffold0091 (1 HSPs)
scaffold0091 (52-114)||(8013-8075)
[»] scaffold0040 (1 HSPs)
scaffold0040 (52-114)||(15100-15162)
[»] scaffold0022 (1 HSPs)
scaffold0022 (52-114)||(127220-127282)
[»] scaffold0216 (1 HSPs)
scaffold0216 (49-114)||(798-863)
[»] scaffold1710 (1 HSPs)
scaffold1710 (61-125)||(940-1004)
[»] scaffold0739 (1 HSPs)
scaffold0739 (49-109)||(230-290)
[»] scaffold0220 (1 HSPs)
scaffold0220 (49-109)||(841-901)
[»] scaffold1355 (1 HSPs)
scaffold1355 (49-83)||(930-964)
[»] scaffold0546 (1 HSPs)
scaffold0546 (16-114)||(4390-4488)
[»] scaffold0293 (1 HSPs)
scaffold0293 (49-83)||(12741-12775)
[»] scaffold0282 (1 HSPs)
scaffold0282 (52-114)||(16437-16499)
[»] scaffold0109 (2 HSPs)
scaffold0109 (16-114)||(8819-8917)
scaffold0109 (16-114)||(33558-33656)
[»] scaffold0080 (1 HSPs)
scaffold0080 (49-83)||(7651-7685)
[»] scaffold0031 (1 HSPs)
scaffold0031 (53-83)||(64053-64083)
[»] scaffold0005 (2 HSPs)
scaffold0005 (52-114)||(164730-164792)
scaffold0005 (49-114)||(278848-278913)
[»] scaffold0029 (1 HSPs)
scaffold0029 (49-114)||(109829-109894)
[»] scaffold0894 (1 HSPs)
scaffold0894 (52-83)||(1393-1424)
[»] scaffold0431 (1 HSPs)
scaffold0431 (16-83)||(7631-7698)
[»] scaffold0403 (1 HSPs)
scaffold0403 (52-83)||(6626-6657)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-109)||(322932-322999)


Alignment Details
Target: scaffold0610 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 8864 - 8985
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  8864 gaaagtgctttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgattcaagagaagatgaaagcgtctcagagtagacagaagagtt 8963  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| |||||||||||||||    
T  8964 atcatgataagaggaggaagga 8985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 1e-45; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 4440222 - 4440098
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| ||    
T  4440222 ggtgaaagtgctttgttagggccggaagttgtgcaagagactacggaaaaggttaagatgattcaagagaagatgaaggcgtctcagagtagacagaaga 4440123  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  4440122 gttatcatgataagaggaggaagga 4440098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 21674512 - 21674633
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| | | |||||||| |||||    
T  21674512 gaaagtgctttgttaggaccggaagttgtgcaagagactacggaaaaatataagatgattcaagagaagatgaaagcgtctcaaagtagacagaagagtt 21674611  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| |||||||||||||||    
T  21674612 atcatgataagaggaggaagga 21674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17923975 - 17923855
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||| ||    
T  17923975 ggtgaaagtgctttgttaggaccggaggttgtgcaagagactacggaaaaagttaagatgattcaagagaaaatgaaagcgtctcagaataggcagaaga 17923876  T
Q  101 gttatcatggtaagaggagga 121  Q
    ||| ||||| |||||||||||    
T  17923875 gttgtcatgataagaggagga 17923855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14936641 - 14936517
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||| ||||||||||||||||||||||||||||| | | || |||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||    
T  14936641 ggtgaaggtgctttgttaggaccggaagttgtgcaataaactaaggaaaaggttaagatgattcaagagaagatgaaagcgtctcagagtagacagaaga 14936542  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  14936541 gttatcatgataagaggagaaagga 14936517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 7824191 - 7824070
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  7824191 gaaagtgctttgtttgggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 7824092  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  7824091 atcatgataagaggagaaagga 7824070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 12368555 - 12368676
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||| |||||||| ||||| |||||| ||| |||||||| |||||    
T  12368555 gaaagtgctttgtttggaccggaagttgtgcaagagactacgaaaaaggttaagatgatccaagagaaaatgaaggcgtctcagagtagacagaagagtt 12368654  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  12368655 atcatgataagaggagaaagga 12368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 27107753 - 27107874
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  27107753 gaaagtgctttgtttgggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 27107852  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  27107853 atcatgataagaggagaaagga 27107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12193850 - 12193729
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||| |||||||||||||||| | ||||||||||| | |||||| || ||||||||||||||||||||||||| ||||||| ||| ||| |||| ||    
T  12193850 ggtgaaaatgctttgttaggaccgaaggttgtgcaagaaactacggagaaggttaagatgattcaagagaagatgagagcgtctcagagtaggcagaaga 12193751  T
Q  101 gttatcatggtaagaggaggaa 122  Q
    ||||||||| ||||||||||||    
T  12193750 gttatcatgttaagaggaggaa 12193729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13353445 - 13353321
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||| ||||||||| || ||| ||| ||| ||  |||| ||    
T  13353445 ggtgaaagtgctttgttaggaccggaggttgtgcaagagactacgaaaaaggttaagatgatttaagagaagacgagagcatctcagagtacgcagaaga 13353346  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  13353345 gttatcatgataagaggaggaagga 13353321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 45146849 - 45146725
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||| || | ||| ||    
T  45146849 ggtgaaagtgctttgttaggaccgaaggttatgcaagagactacggaaaatgttaagatgattcaggagaagatgaaagcgtctcagagtaaatagaaga 45146750  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||  |||||| ||||||||    
T  45146749 gttatcattataagagtaggaagga 45146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 15364231 - 15364110
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| | ||||| ||||||||||||||||| | | || |||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  15364231 gaaagtgatatgttaagaccggaagttgtgcaaaaaaataaggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 15364132  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  15364131 atcatgataagaggagaaagga 15364110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 13378974 - 13378874
Alignment:
Q  19 ggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagagga 118  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||| ||| |||||||| | ||||| ||| ||||||||    
T  13378974 ggaccggaagttgtgcaagagactacggaaaaggttaagatgatccaagagaagatgaaagcatctcagagtagacagaagcgttattatgataagagga 13378875  T
Q  119 g 119  Q
    |    
T  13378874 g 13378874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 23641805 - 23641687
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||| ||||||||||||| |||||||||| |||| |||| | |||||| |||||||||| || ||||||||||||||| ||| ||  |||| || |||||    
T  23641805 agtgttttgttaggaccgaaagttgtgcacgagactacgaagaaagttcagatgattcaggataagatgaaagcgtctcagaataagcagaagacttatc 23641706  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||| |||||||||||    
T  23641705 atgataaaaggaggaagga 23641687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 17145245 - 17145358
Alignment:
Q  12 tttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggt 111  Q
    |||||||||||||| |||||| |||||||  |  ||||| || |||||||||||||| || |||||||| ||| ||| ||| |||| ||||||||||| |    
T  17145245 tttgttaggaccggtagttgttcaagagaccatagaaaaggtgaagatgattcaagaaaatatgaaagcttctcagagtaggcagaagagttatcatgat 17145344  T
Q  112 aagaggaggaagga 125  Q
    ||||||| ||||||    
T  17145345 aagaggatgaagga 17145358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 5432578 - 5432696
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||||||||| |||||||||||| ||| |||  | || || || ||||||   |||||||||| ||||||| | | ||| |||| |||||    
T  5432578 gaaagtgctttgttaggaccagaagttgtgcaatagactacatagaaggtgaatatgatt---gagaagatgagagcgtctcaaagtaggcagaagagtt 5432674  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| |||||||||||||||    
T  5432675 atcatgataagaggaggaagga 5432696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 12687780 - 12687671
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaaga 115  Q
    |||||||| ||  |||| ||| ||| ||| || ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||     
T  12687780 ttaggaccagagattgtccaacagactactgagaaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagc 12687681  T
Q  116 ggaggaagga 125  Q
    | ||||||||    
T  12687680 gcaggaagga 12687671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 17307 - 17416
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaaga 115  Q
    |||||||| ||| |||| ||  ||| ||| || ||||||||||||||||||||||| |||||||||||  ||| | |||| |  |||||||||| ||||     
T  17307 ttaggacccgaaattgttcagcagactactgagaaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaaaagttatcatgataagc 17406  T
Q  116 ggaggaagga 125  Q
    | ||||||||    
T  17407 gcaggaagga 17416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 9596303 - 9596238
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  9596303 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 9596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 11553126 - 11553191
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  11553126 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagttgacaaaagagttatcatgataag 11553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14954866 - 14954801
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  14954866 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 14954801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 11772232 - 11772330
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||| |||| ||| | | ||| || || ||||||||||||||||| | ||||||| |||| |||| | |||| | ||||||||||| ||||    
T  11772232 ttaggaccggaaattgttcaacaaactactgagaaggttaagatgattcaagaaatgatgaaaacgtcgtagagtcgacaaaagagttatcatgataag 11772330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14038053 - 14037988
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14038053 aaagttaaaatgattcaagaaaagatgaaagcgtcacagagtcgacaaaagagttatcatgataag 14037988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14348083 - 14348018
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14348083 aaagttaaaatgattcaagaaaagatgaaagcgtcacagagtcgacaaaagagttatcatgataag 14348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 20467025 - 20466952
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||| ||||||||| |||||||||||||  ||| ||| ||| ||||  |||||||||| |||| ||||||||||    
T  20467025 gttatgatgattcaggagaagatgaaagaatctcagagtaggcagaatagttatcatgataagcggaggaagga 20466952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 18053943 - 18054030
Alignment:
Q  37 gagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagg 124  Q
    |||| ||| |||||||| ||||||||   ||||||||||||||||||  ||| | |||||| |||||| ||||  ||| |||||||||    
T  18053943 gagactacagaaaaagtcaagatgatcagagagaagatgaaagcgtcacagagtcgacagaagagttaccatgacaagcggaggaagg 18054030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 21662210 - 21662131
Alignment:
Q  46 gaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||| |||||| |||||  ||| ||||||||||||||  ||| |||||| | ||||||||||| |||| | ||||||||    
T  21662210 gaaaatgttaagttgattagagaaaagatgaaagcgtcacagagtagacaaaagagttatcatgataagcgtaggaagga 21662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 2e-44; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18748599 - 18748477
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||| ||    
T  18748599 ggtgaaagtgctttgttaggaccggaggttgtgcaagagactacggaaaaagttaagatgattcaagataagatgaaagtgtctcagagtagacagaaga 18748500  T
Q  101 gttatcatggtaagaggaggaag 123  Q
    ||||||||| |||||||||||||    
T  18748499 gttatcatgataagaggaggaag 18748477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-41
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 17193025 - 17192904
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  17193025 gaaagtgttgtgttacgaccggaagttgtgcaagagagtacggaaaaggttaagatgattcaagagaagatgaaagcgtctcagagtagacagaagagtt 17192926  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  17192925 atcatgataagaggagaaagga 17192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 16742915 - 16743033
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  16742915 agtgctttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 16743014  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  16743015 atgataagaggagaaagga 16743033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 8274611 - 8274729
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  8274611 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 8274710  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  8274711 atgataagaggagaaagga 8274729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 6712618 - 6712739
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||| ||||| ||||||| |||  |||| ||||||||||||||| ||||||||||||||||| ||| ||| |||| |||||    
T  6712618 gaaagtgctttgttaggaccggaggttgtacaagagactacataaaaggttaagatgattcaaaagaagatgaaagcgtctcagagtaggcagaagagtt 6712717  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| |||||||||||||||    
T  6712718 atcatgataagaggaggaagga 6712739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 15576678 - 15576560
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||| ||||    
T  15576678 agtgctttgtttggaccggaagttgtgcgagagactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagctatc 15576579  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  15576578 atgataagaggagaaagga 15576560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 13975261 - 13975375
Alignment:
Q  11 ctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatgg 110  Q
    |||||||||| |||||||||||| |||| | ||||||||| |||||||||||||| ||||||||||| || ||| ||| |||||||| ||| |||||||     
T  13975261 ctttgttagggccggaagttgtggaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcatctcagagtagacagaagagctatcatga 13975360  T
Q  111 taagaggaggaagga 125  Q
    ||||||||| |||||    
T  13975361 taagaggagaaagga 13975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 6153060 - 6153140
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtct 84  Q
    ||||||| | |||||||  |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  6153060 gaaagtgttgtgttagggtcggaagttgtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaagcgtct 6153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 21686873 - 21686796
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtct 84  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| ||||||||| |||| || |||||||||| ||||    
T  21686873 agtgctctgttaggaccagaaattgtgcaagagactacggaaaaggttaagatgtttcaggaaaagatgaaagagtct 21686796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 16692039 - 16691971
Alignment:
Q  46 gaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||| |||||||||||  ||| | |||||| ||||||||||| ||||    
T  16692039 gaaaaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacagaagagttatcatgataag 16691971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 15208764 - 15208702
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| |||||||||||||| |||| | |||||| ||||||||||| ||||    
T  15208764 gttaagatgattcaagaaaagatgaaagcgtcgtagagtcgacagaagagttatcatgataag 15208702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 16371289 - 16371224
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  16371289 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 16371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 267474 - 267588
Alignment:
Q  11 ctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatgg 110  Q
    |||| |||||| | |||||||||||||||| |||  |||| |||||||||||| | || || ||||||| |||| ||  ||| |||  || ||||||||     
T  267474 cttttttaggatcagaagttgtgcaagagactacaaaaaaggttaagatgatttaggaaaacatgaaagtgtctcagggtaggcaggagatttatcatga 267573  T
Q  111 taagaggaggaagga 125  Q
    |||||||||||||||    
T  267574 taagaggaggaagga 267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 14876756 - 14876818
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14876756 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 14876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 15248020 - 15247958
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| ||||||||||||||  ||| | |||||| ||||||||||| ||||    
T  15248020 gttaagatgattcaagaaaagatgaaagcgtcacagagtcgacagaagagttatcatgataag 15247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 16492438 - 16492500
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  16492438 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 16492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 17489723 - 17489661
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  17489723 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 17489661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 12498124 - 12498059
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  12498124 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 12498059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 44777145 - 44777058
Alignment:
Q  37 gagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagg 124  Q
    |||| ||| |||||||| ||||||||   ||||||||||||||||||  ||| | |||||| |||||| ||||  |||||||||||||    
T  44777145 gagactacagaaaaagtcaagatgatcagagagaagatgaaagcgtcgcagagtcgacagaagagttaccatgacaagaggaggaagg 44777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 15016016 - 15016074
Alignment:
Q  67 gagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||| ||| |||||| | ||||||||||| |||| | ||||||||    
T  15016016 gagaagatgaaagcgtctcagagtagacaaaagagttatcatgataagcgtaggaagga 15016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 90; Significance: 6e-44; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 3492 - 3371
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  3492 gaaagtgctttgttaggaccggaagttgtgcaagagactatggaaaaggttaagatgattcaagagaagatgaaagcgtctcagagtagacagaagagtt 3393  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  3392 atcatgataagaggagaaagga 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 89; Significance: 2e-43; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14859 - 14735
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||| ||| |||||||| ||    
T  14859 ggtgaaagtgttttgttaggaccggaagttgtgcaagagactacggaaaaatttaagatgattgaagagaagatgaaagagtctcagagtagacagaaga 14760  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  14759 gttatcatgataagaggaggaagga 14735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-43; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23503662 - 23503538
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||| ||    
T  23503662 ggtgaaagtgctttgttaggaccggaagtggtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaagcgtctcagagtagacagaaga 23503563  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  23503562 gttatcatgataagaggagaaagga 23503538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 11210849 - 11210964
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||| ||||||||    
T  11210849 agtgttttgttaggaccggaagttgtgcaagagactacggaaaaagttaagatgattcaggagaagatgaaagcatctcagagtagacagaagagttatc 11210948  T
Q  107 atggtaagaggaggaa 122  Q
    ||| ||||||||||||    
T  11210949 atgataagaggaggaa 11210964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 24581424 - 24581306
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  24581424 agtgctttgttaggaccggaagttgtgcaagaaaccacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 24581325  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  24581324 atgataagaggaggaagga 24581306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 27011297 - 27011179
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||| | ||||||||    
T  27011297 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacataagagttatc 27011198  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  27011197 atgataagaggaggaagga 27011179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 21937340 - 21937461
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  21937340 gaaagtgctttgtttgggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 21937439  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  21937440 atcatgataagaggagaaagga 21937461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 25244502 - 25244581
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagta--cggaaaaagttaagatgattcaagagaagatgaaagcg 81  Q
    |||||||||||||||||||| ||||||||| |||||| ||  |||| || ||||||||||||||  ||||||||||||||    
T  25244502 gaaagtgctttgttaggaccagaagttgtgaaagagactacgcggagaatgttaagatgattcagaagaagatgaaagcg 25244581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 25308654 - 25308733
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagta--cggaaaaagttaagatgattcaagagaagatgaaagcg 81  Q
    |||||||||||||||||||| ||||||||| |||||| ||  |||| || ||||||||||||||  ||||||||||||||    
T  25308654 gaaagtgctttgttaggaccagaagttgtgaaagagactacgcggagaatgttaagatgattcagaagaagatgaaagcg 25308733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 18775966 - 18775890
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||  ||||||||||| |||| | |||| | ||||||||||| |||| | ||||||||    
T  18775966 aaagttaagatgattcaagagagaatgaaagcgtcgtagagtcgacaaaagagttatcatgataagcgcaggaagga 18775890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 26738869 - 26738967
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||| |||| ||| | | ||| || |||||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  26738869 ttaggaccagaaattgtacaacaaactactgagaaagttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 26738967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 23573931 - 23573866
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  23573931 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 23573866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 21984505 - 21984536
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||||||||||||    
T  21984505 gttaagatgattcaagagaagatgaaagcgtc 21984536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 25423375 - 25423344
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||||||||||||    
T  25423375 gttaagatgattcaagagaagatgaaagcgtc 25423344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 16065889 - 16065963
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||| ||  ||||||| || ||| ||| |||  ||| ||||||||||| |||||||||||||||    
T  16065889 aaagttaagatgattcagga--agatgaaggcatctcagactagggagaagagttatcatgataagaggaggaagga 16065963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 23440414 - 23440349
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| |||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  23440414 aaagttaaaatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 23440349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 20798946 - 20798915
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||||||||||| |||||||||||    
T  20798946 gttaagatgattcaagagaaaatgaaagcgtc 20798915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 21498236 - 21498267
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||| ||||||||||||||    
T  21498236 gttaagatgattcaagaaaagatgaaagcgtc 21498267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 87; Significance: 4e-42; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1024 - 1142
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||| ||| |||||||| ||    
T  1024 ggtgaaagtgctttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatggtccaagagaagatgaaagcgtctcagagtagacagaaga 1123  T
Q  101 gttatcatggtaagaggag 119  Q
    ||||||||| |||||||||    
T  1124 gttatcatgataagaggag 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 85; Significance: 6e-41; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 356 - 480
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||    
T  356 ggtgaaagtgctttgttaggaccggaagttgtgaaagagactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaaga 455  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  456 gttatcatgataagaggagaaagga 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 85; Significance: 6e-41; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23030 - 22906
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| | |||| ||| |||||||| ||    
T  23030 ggtgaaagtgctttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaggagtctcagagtagacagaaga 22931  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  22930 gttatcatgataagaggagaaagga 22906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 80
Target Start/End: Complemental strand, 6308 - 6280
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagc 80  Q
    |||||||||||||||||||||||||||||    
T  6308 gttaagatgattcaagagaagatgaaagc 6280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 6e-41; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 25743200 - 25743323
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||| ||    
T  25743200 ggtgaaagtgctttgt-aggaccggaagttgtgcaagagactacggaaaaggttaagatgattcaagagaagatgagagcgtctcagagtagacagaaga 25743298  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  25743299 gttatcatgataagaggagaaagga 25743323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 23996411 - 23996293
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  23996411 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 23996312  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  23996311 atgataagaggaggaagga 23996293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 16098216 - 16098095
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||| |||||||||||||||||||||||||||| |||  |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  16098216 gaaagtgccttgttaggaccggaagttgtgcaagagactacataaaaggttaagatgatccaagagaagatgaaagcgtcttagagtagacagaagagtt 16098117  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  16098116 atcatgataagaggagaaagga 16098095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 25655651 - 25655528
Alignment:
Q  2 gtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggag 101  Q
    |||||||||||||||||||| | |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  25655651 gtgaaagtgctttgttaggatcagaagttgtgcaagagactaagaaaaaagttaagatgattcaagagaagatgaaagcgtctcagagtagacagaagag 25655552  T
Q  102 ttatcatggtaagaggaggaagga 125  Q
    |||||||  ||||||||| |||||    
T  25655551 ttatcataataagaggagaaagga 25655528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 16382491 - 16382609
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  16382491 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 16382590  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  16382591 atgataagaggagaaagga 16382609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 16233372 - 16233254
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||| |||||||| |||||| | | |||||||| ||||||||    
T  16233372 agtgctttgttaggactggaagttgtgcaagagactacggaaaaggttaagattattcaagaaaagatgaaggcgtctcaaagtagacagaagagttatc 16233273  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  16233272 atgataagaggagaaagga 16233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 15078479 - 15078600
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||| ||||||||||||||| ||| |||||| | |||||    
T  15078479 gaaagtgccttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgatccgagaaaagatgaaagcgtctcagagtagacataagagtt 15078578  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||| ||| |||||    
T  15078579 atcatgataagaagagaaagga 15078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 18838026 - 18838144
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||| ||| || | ||| ||||||||    
T  18838026 agtgctatgttagcaccggaagttgtgcaagagactacggaaaaggttaagatgattcaagaaaagatgaaggcgtctcagagtacatagaagagttatc 18838125  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  18838126 atgataagaggagaaagga 18838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 21413053 - 21413174
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||| || ||||||||||||| |||||||||||| | ||||||||| ||||||||||| ||||| ||||||||||||||| ||| ||||| || |||||    
T  21413053 gaaagcgcattgttaggaccgggagttgtgcaagaaactacggaaaaggttaagatgatccaagaaaagatgaaagcgtctcagagtagaccgaagagtt 21413152  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  21413153 atcatgataagaggagaaagga 21413174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 1648904 - 1649020
Alignment:
Q  9 tgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcat 108  Q
    |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||| ||| ||||||    
T  1648904 tgctttattaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggaaaagatgaaggcgtctcagagtagacagaagagctatcat 1649003  T
Q  109 ggtaagaggaggaagga 125  Q
    | ||||||||| |||||    
T  1649004 gataagaggagaaagga 1649020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 18571820 - 18571696
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||| ||| |||| |||||| ||||||| | ||||||||| |||||||||||||| ||||| | |||||||||| ||| |||||||| ||    
T  18571820 ggtgaaagtgctttattaagaccagaagttatgcaagaaactacggaaaatgttaagatgattcaggagaaaaggaaagcgtctcagagtagacagaaga 18571721  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  18571720 gttatcatgataagaggagaaagga 18571696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 17813891 - 17813773
Alignment:
Q  5 aaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtta 104  Q
    |||||||||||||||||||||| |||||||||||||  ||| |||| |||||| |||||||||||||||||  ||||||| ||| ||| ||||  || ||    
T  17813891 aaagtgctttgttaggaccggaggttgtgcaagagacgacgaaaaaggttaagttgattcaagagaagatg--agcgtctcagagtaggcagaaaaggta 17813794  T
Q  105 tcatggtaagaggaggaagga 125  Q
     |||| |||||||||||||||    
T  17813793 ccatgataagaggaggaagga 17813773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 25765450 - 25765515
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | |||||| ||||||||||| ||||    
T  25765450 aaagtaaagatgattcaagagaaaatgaaagcgtcgtagagtcgacagaagagttatcatgataag 25765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 22433990 - 22433930
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | |||||||||||    
T  22433990 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatg 22433930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 19864805 - 19864743
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  19864805 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 19864743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 12498147 - 12498082
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  12498147 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 12498082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 12510754 - 12510819
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  12510754 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 12510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 25610024 - 25610055
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||||||||||||    
T  25610024 gttaagatgattcaagagaagatgaaagcgtc 25610055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 1543244 - 1543278
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  1543244 aaagttaagatgattcaagagaaaatgaaagcgtc 1543278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 12505473 - 12505411
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  12505473 gttaagatgattcaagagaatatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 12505411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 22078851 - 22078913
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||| ||| |||||||||||||| |||| | |||| | ||||||||||| ||||    
T  22078851 gttaagatgattccagaaaagatgaaagcgtcgtagagtcgacaaaagagttatcatgataag 22078913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 23078623 - 23078525
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||| |||| ||| | | ||| || |||||||||||||||||||| ||||||||||| ||  ||| | |||| | ||||||||||| ||||    
T  23078623 ttaggaccagaaattgttcaacaaactactgagaaagttaagatgattcaagaaaagatgaaagcatcgcagactcgacaaaagagttatcatgataag 23078525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 5839379 - 5839444
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||| ||||||||| ||||||| |||||||||||  ||| | |||||| ||||||||||| ||||    
T  5839379 aaagtcaagatgatttaagagaaaatgaaagcgtcgcagagtcgacagaagagttatcatgataag 5839444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 16963527 - 16963592
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||| |||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  16963527 aaagtaaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 16963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 18408106 - 18408142
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttaga 88  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  18408106 gttaagataattcaagagaagatgaaagcgtcgtaga 18408142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 79
Target Start/End: Original strand, 22762618 - 22762645
Alignment:
Q  52 gttaagatgattcaagagaagatgaaag 79  Q
    ||||||||||||||||||||||||||||    
T  22762618 gttaagatgattcaagagaagatgaaag 22762645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-40; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 13247947 - 13247832
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| |||||    
T  13247947 gaaagtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaagagaagatgaaggcgtctcagagtagacagaagagtt 13247848  T
Q  104 atcatggtaagaggag 119  Q
    |||||| |||||||||    
T  13247847 atcatgataagaggag 13247832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 9291137 - 9291016
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  9291137 gaaagtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 9291038  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  9291037 atcatgataagaggagaaagga 9291016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 15293127 - 15293248
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  15293127 gaaagtgctttgttaggaccggaagttgtgcaagaaactacagaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 15293226  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||| |||||||||||    
T  15293227 atcatgataaaaggaggaagga 15293248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 55375325 - 55375449
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||||||||||||||| |||||||| ||||| | ||||||||| ||||||||||||||  ||||||||||||||||| ||| |||||||| ||    
T  55375325 ggtgaaagtgctttgttaggaccagaagttgtacaagaaactacggaaaaggttaagatgattcagtagaagatgaaagcgtctcagagtagacagaaga 55375424  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  55375425 gttatcatgataagaggagaaagga 55375449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12132376 - 12132500
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||| ||||||||| || |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| | | ||| |||| ||    
T  12132376 ggtgaaagtgttttgttaggtccagaagttgtgcaagagactacggaaaaggttaagatgattcaagagaagatgaaggcgtctcaaagtaggcagaaga 12132475  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||| ||||| |||||||||||||||    
T  12132476 gttgtcatgataagaggaggaagga 12132500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 14997615 - 14997497
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||| |||||||| |||||| ||| |||||||| |||| |||    
T  14997615 agtgctttgttaggaccgaaagttgtgcaagaaactacggaaaaggttaagatgattcaagaaaagatgaaggcgtctcagagtagacagaagagtcatc 14997516  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  14997515 atgataagaggagaaagga 14997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 16445185 - 16445303
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||| ||||||||||||||| | |||  |||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  16445185 agtgctttgttaggactggaagttgtgcaagaaactacataaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 16445284  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  16445285 atgataagaggaggaagga 16445303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12342830 - 12342952
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||||||  |||||||||| ||||||||||||| |||  |||| |||||||||||||||||||| || |  |||||| ||| ||| |||| ||    
T  12342830 ggtgaaagtgctttactaggaccggaggttgtgcaagagactacataaaaggttaagatgattcaagagaatataagggcgtctcagagtaggcagaaga 12342929  T
Q  101 gttatcatggtaagaggaggaag 123  Q
    ||||||||| |||||||||||||    
T  12342930 gttatcatgataagaggaggaag 12342952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 16685530 - 16685435
Alignment:
Q  30 tgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||| ||| ||| ||||  | |||||||| |||||||| ||||||    
T  16685530 tgtgcaagagactacgaagaaagttaagatgattcaggagaagatgagagcgtctcagagtaggcagaaaatttatcatgataagaggatgaagga 16685435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 14159779 - 14159684
Alignment:
Q  19 ggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||  |||| ||| ||| ||| ||||| ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14159779 ggaccggagattgttcaacagactactgaaaaggttaagatgattcaagagaagatgaaagcgtcgcagagtcgacataagagttatcatgataag 14159684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 15149761 - 15149826
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  15149761 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 15149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 18227201 - 18227275
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaag 123  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| |||| | ||||||    
T  18227201 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcgcaggaag 18227275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 12523933 - 12523873
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | |||||||||||    
T  12523933 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatg 12523873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 14680824 - 14680748
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||| ||||||| |||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  14680824 aaagttaagatgattcaagagaaaatgaaagtgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 14680748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 7090686 - 7090655
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||||||||||||    
T  7090686 gttaagatgattcaagagaagatgaaagcgtc 7090655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 14652562 - 14652500
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14652562 gttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 14652500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 14851124 - 14851186
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||| ||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14851124 gttaagatgatacaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 14851186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 16355200 - 16355234
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  16355200 aaagttaagatgattcaagagaaaatgaaagcgtc 16355234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 1640180 - 1640245
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||| |||||||| |||||  ||| | |||| | ||||||||||| ||||    
T  1640180 aaagttaagatgattcaagaaaagatgaaggcgtcgcagagttgacaaaagagttatcatgataag 1640245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 16252203 - 16252276
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||||| || ||||||||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  16252203 gttaagatgattcaagagaaaataaaagcgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 16252276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 16676458 - 16676534
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||| ||||||| ||||||| |||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  16676458 aaagttaagatgatttaagagaaaatgaaagtgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 16676534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 9e-40; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 16877511 - 16877629
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  16877511 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 16877610  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  16877611 atgataagaggaggaagga 16877629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 21196915 - 21197036
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||| ||| | | ||||||||||    
T  21196915 gaaagtgctttgttaggaccggaagttgtgcaagagactatgtaaaaagttaagatgattcaagagaaaatgaaagcgtctcagagttggcagaggagtt 21197014  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  21197015 atcatgataagaggagaaagga 21197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23157421 - 23157545
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||  ||||||||||||||| |||| |||| |||||||||||||||||||| |||||||| ||| ||| |||| ||||||    
T  23157421 ggtgaaagtgctttgttaggaccaaaagttgtgcaagagactacgaaaaaggttaagatgattcaagagaatatgaaagcatctcagaatagatagagga 23157520  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  23157521 gttatcatgataagaggaggaagga 23157545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22315562 - 22315438
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||| ||| | |||||||||||||||| ||||| | ||| ||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||    
T  22315562 ggtgaaagttcttgggtaggaccggaagttgttcaagaaactacagaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaaga 22315463  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  22315462 gttatcatgataagaggaggaagga 22315438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 21850753 - 21850871
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||| ||| ||||    
T  21850753 agtgctttgttagggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggaaaagatgaaggcgtctcagagtagacagaagagctatc 21850852  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||| ||||||    
T  21850853 atgataagaggatgaagga 21850871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 22982801 - 22982699
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    ||||||||||||| |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||| ||| |||||||| ||||||||    
T  22982801 agtgctttgttagaaccggaagttgtgcaagagactatggaaaaggttaagatgatccaagagaagatgaaagcatctcagagtagacagaagagttatc 22982702  T
Q  107 atg 109  Q
    |||    
T  22982701 atg 22982699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 20652746 - 20652867
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||| |||||||||||||| || |||||||||| |||||| || ||||||||||| ||||||||||||||||||||| ||| | |||||| |||||    
T  20652746 gaaagtgccttgttaggaccggaggtggtgcaagagactacggagaaggttaagatgatccaagagaagatgaaagcgtctcagagtggacagaagagtt 20652845  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||  ||||||||| |||||    
T  20652846 atcattataagaggagaaagga 20652867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 25282490 - 25282378
Alignment:
Q  13 ttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggta 112  Q
    ||||||||||||||| |||||||| |||  || || || |||||||| |||||||||||||||| || ||||  || ||| |||| ||||||||||  ||    
T  25282490 ttgttaggaccggaaattgtgcaaaagacgacagagaaggttaagatcattcaagagaagatgagagtgtctcggagtaggcagaagagttatcataata 25282391  T
Q  113 agaggaggaagga 125  Q
    |||||||||||||    
T  25282390 agaggaggaagga 25282378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 19978290 - 19978225
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  19978290 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 19978225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 22283369 - 22283243
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaa--------gttaagatgattcaagagaagatgaaagcgtcttagattagacagag 98  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||        |||||||||||||| ||||| |||| || |||| ||| |||  |||     
T  22283369 agtgttttgttaggaccgaaagttgtgcaagagactacggaataacggaataggttaagatgattcaggagaaaatgagagtgtctcagagtaggtagaa 22283270  T
Q  99 gagttatcatggtaagaggaggaagga 125  Q
    ||||||||||| ||| |||||||||||    
T  22283269 gagttatcatgataaaaggaggaagga 22283243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 32600464 - 32600391
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||||| |||||||||||  ||| | |||||| ||||||||||| |||| | ||||||||    
T  32600464 gttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacagaagagttatcatgataagcgcaggaagga 32600391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 21166998 - 21167060
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  21166998 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 21167060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 15533703 - 15533638
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||||| ||||||||||||||||||||  ||| | |||||| ||||||||||| ||||    
T  15533703 aaagttaaaatgatacaagagaagatgaaagcgtcgcagagtcgacagaagagttatcatgataag 15533638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 22377904 - 22377976
Alignment:
Q  42 tacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||| || ||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  22377904 tacggagaaggttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 22377976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 22384079 - 22384151
Alignment:
Q  42 tacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||| || ||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  22384079 tacggagaaggttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 22384151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 23949243 - 23949167
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||| ||||| ||||||||||||||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  23949243 aaagttaagatgatccaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcgtaggaagga 23949167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 16408470 - 16408568
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||  |||| ||  ||| ||| || ||||||||||||||||||||||| ||||||| |||  ||| | |||| | ||||||||||| ||||    
T  16408470 ttaggaccggagattgttcagcagactactgagaaagttaagatgattcaagagaaaatgaaagtgtcgcagagtcgacaaaagagttatcatgataag 16408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 82
Target Start/End: Original strand, 21394326 - 21394356
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgt 82  Q
    |||||||||||||||||||||||||||||||    
T  21394326 gttaagatgattcaagagaagatgaaagcgt 21394356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 82
Target Start/End: Original strand, 21788819 - 21788849
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgt 82  Q
    |||||||||||||||||||||||||||||||    
T  21788819 gttaagatgattcaagagaagatgaaagcgt 21788849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 22133499 - 22133564
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| ||||| |||||  ||| | |||| | ||||||||||| ||||    
T  22133499 aaagttaagatgattcaagagaaaatgaaggcgtcgcagagtcgacaaaagagttatcatgataag 22133564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 22164649 - 22164714
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| ||||| |||||  ||| | |||| | ||||||||||| ||||    
T  22164649 aaagttaagatgattcaagagaaaatgaaggcgtcgcagagtcgacaaaagagttatcatgataag 22164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 22987524 - 22987459
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||| ||| ||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  22987524 aaagataatatgattcaagagaagatgaaagcgtcgcagaatcgacaaaagagttatcatgataag 22987459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 30313602 - 30313667
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| ||||||| |||  ||| | |||| | ||||||||||| ||||    
T  30313602 aaagttaagatgattcaagagaaaatgaaagtgtcgcagagtcgacaaaagagttatcatgataag 30313667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 21681921 - 21681988
Alignment:
Q  42 tacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    |||||| ||||| ||||||||   ||| |||||||||||||| |||| | |||||| |||||||||||    
T  21681921 tacggagaaagtcaagatgataagagaaaagatgaaagcgtcgtagagtcgacagaagagttatcatg 21681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 24818048 - 24818147
Alignment:
Q  23 cggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaa 122  Q
    |||||||||| ||| ||| |||  |||| |||||||||||||| || ||||||||| ||||| ||| |||  ||| |||||| |||| | |||| |||||    
T  24818048 cggaagttgttcaacagactacataaaaggttaagatgattcaggaaaagatgaaatcgtctcagagtaggaagaagagttaccatgatgagagaaggaa 24818147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 9e-40; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 12640432 - 12640550
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  12640432 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 12640531  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| |||||||||||||||    
T  12640532 atgataagaggaggaagga 12640550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 23817564 - 23817684
Alignment:
Q  5 aaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtta 104  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||| ||||||    
T  23817564 aaagtgctttgttaggaccggaggttgtgcaagagactacggaaaaagttaagatgatccaagagaagatcaaagcgtctcagagtagacagaagagtta 23817663  T
Q  105 tcatggtaagaggaggaagga 125  Q
    ||||| ||| ||||| |||||    
T  23817664 tcatgataaaaggagaaagga 23817684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25128583 - 25128459
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||| |||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||    
T  25128583 ggtgaaagtgttttgttaggatcggaggttgtccaagagactacggaaaaagttaagatgattcaagagaagatgaaagcatctcagagtagacagaaga 25128484  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| | | |||||||||||    
T  25128483 gttatcatgatgaaaggaggaagga 25128459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 22276209 - 22276091
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    ||||| |||||||||| ||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  22276209 agtgccttgttaggactggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 22276110  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  22276109 atgataagaggagaaagga 22276091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 24570178 - 24570299
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||| ||||| ||| |||| ||| ||| |    
T  24570178 gaaagtgttttgttaggaccggaagttgtgaaagagactacggaaaaggttaagatgaatcaagagaagatgaaaacgtctcagagtagatagaagagct 24570277  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  24570278 atcatgataagaggagaaagga 24570299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 24831702 - 24831818
Alignment:
Q  9 tgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcat 108  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| | |||| ||| |||||||| ||||||||||    
T  24831702 tgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggtgtctcagagtagacagaagagttatcat 24831801  T
Q  109 ggtaagaggaggaagga 125  Q
    | |||||| | ||||||    
T  24831802 gataagagaacgaagga 24831818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 22762079 - 22762193
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||| ||||||||||||||||||||| ||| |||  ||| |||||    
T  22762079 gaaagtgctttgttaggaccggaagttgtgcaagagactacataaaaggttaagatgatccaagagaagatgaaagcgtctcagagtaggaagaagagtt 22762178  T
Q  104 atcatggtaagagga 118  Q
    ||||||  |||||||    
T  22762179 atcatgacaagagga 22762193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 24675377 - 24675312
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| ||||||||||| |||| | |||| | ||||||||||| ||||    
T  24675377 aaagttaagatgattcaagagaaaatgaaagcgtcgtagagtcgacaaaagagttatcatgataag 24675312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 21908803 - 21908915
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||| || ||  ||||||||||||||||| ||  || || || ||||||||||| ||||| |||| ||||||| ||| ||  ||||  ||||    
T  21908803 gaaagtgctttgataagaatggaagttgtgcaagagactatagagaaggtgaagatgattcacgagaatatgatagcgtctcagagtatgcaga--agtt 21908900  T
Q  104 atcatggtaagagga 118  Q
    |||||||||||||||    
T  21908901 atcatggtaagagga 21908915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 22756985 - 22757083
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||  |||| ||| ||| ||| || ||||||||| |||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  22756985 ttaggaccagagattgttcaacagattactgagaaagttaaggtgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 22757083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 23063962 - 23063900
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| |||||| | |||||| |||| ||||    
T  23063962 gttaagatgattcaagagaagatgaaagcgtcgcagagtagacaaaagagttaccatgataag 23063900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 21325821 - 21325886
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  21325821 aaagttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 21325886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 14708977 - 14708902
Alignment:
Q  47 aaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaa 122  Q
    |||| ||||||||||| ||  ||||||||||||| || | || |||||||| ||||||||||| |||| |||||||    
T  14708977 aaaaggttaagatgatccagaagaagatgaaagcatcgtggagtagacagaagagttatcatgataagcggaggaa 14708902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 24708004 - 24708071
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||| ||| |||| ||  ||| ||| || ||||||||||||||||||||||| |||||||||||    
T  24708004 ttaggaccagaaattgttcagcagactactgagaaagttaagatgattcaagagaaaatgaaagcgtc 24708071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 24825840 - 24825902
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||| ||||| ||||||||||||||  ||| | |||| ||||||||||||| ||||    
T  24825840 gttaagatgatccaagaaaagatgaaagcgtcgcagagtcgacaaaggagttatcatgataag 24825902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 21145585 - 21145650
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||| |||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  21145585 aaagttcagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 21145650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 27368391 - 27368452
Alignment:
Q  53 ttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  27368391 ttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 27368452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 12574286 - 12574166
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| | |||| ||||||||  | || || |||| ||| |||||||| ||||||||   ||||||||||||||||||  ||| | |||||| |||||    
T  12574286 gaaagtgttgtgttgggaccggatttggttcaggagactacagaaaaagtcaagatgatcagagagaagatgaaagcgtcacagagtcgacagaagagtt 12574187  T
Q  104 atcatggtaagaggaggaagg 124  Q
    | ||||  ||| |||||||||    
T  12574186 accatgacaagcggaggaagg 12574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 23087321 - 23087278
Alignment:
Q  66 agagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    |||||||||||||||||| |||| | |||||| |||||||||||    
T  23087321 agagaagatgaaagcgtcgtagagtcgacagaagagttatcatg 23087278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 14710 - 14831
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| |||||    
T  14710 gaaagcgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaagagaagatgaaggcgtctcagagtagacagaagagtt 14809  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  14810 atcatgataagaggagaaagga 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 82; Significance: 4e-39; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 43871 - 43750
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| | |||||    
T  43871 gaaagtgctttattaggaccggaagttgtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaagcgtctcagagtagacataagagtt 43772  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  43771 atcatgataagaggagaaagga 43750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 14987 - 14869
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||| | |||| ||| ||||||||  |||||||    
T  14987 agtgctttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgatttaggagaagatgaaggtgtctcagagtagacagaaaagttatc 14888  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  14887 atgataagaggagaaagga 14869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 81; Significance: 1e-38; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 1394 - 1518
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||| |||| ||| ||    
T  1394 ggtgaaagtgccttgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgatccaagagaagatgaaagcgtctcagagtagatagaaga 1493  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||| ||| |||||    
T  1494 gttatcatgataagaagagaaagga 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 80; Significance: 6e-38; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 8426 - 8307
Alignment:
Q  6 aagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttat 105  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||| || ||||    
T  8426 aagtgctttgttagggccggaagttgtgcaagagactacggaaaaggttaagatgattcaagagaatatgaaagcgtctcagagtagacagaagacttat 8327  T
Q  106 catggtaagaggaggaagga 125  Q
    |||| ||||||||| |||||    
T  8326 catgataagaggagaaagga 8307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 79; Significance: 2e-37; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 23724 - 23606
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  23724 agtgctttgttaggaccggaggttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaagcgtctcagagtagacagaagagttatc 23625  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  23624 atgataagaggagaaagga 23606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9323 - 9199
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||| ||    
T  9323 ggtgaaagtgctttgttaggacaggaagttgtgcaagagactacagaaaaggttaagatgattcaagagaagatgaaagcgtctcagagtagatagaaga 9224  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    | ||||||| ||||| ||| |||||    
T  9223 gctatcatgataagatgagaaagga 9199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 7504 - 7380
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||| |||||||| ||   |||  |    
T  7504 ggtgaaagtgctttgttaggaccggaagttgtgcaagaaactacggaaaaagagaagatgattcaagagaagatgaaagtgtcttagagtacgtagaaaa 7405  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| |||||||||||||||    
T  7404 gttatcatgataagaggaggaagga 7380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 13232 - 13120
Alignment:
Q  13 ttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggta 112  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| |||||||| ||||||||||| ||    
T  13232 ttgttaggaccggaagttgtgcaagagactacggaaaaggttaaaatgatccaagagaagatgaaagcgtctcagagtagacagaagagttatcatgata 13133  T
Q  113 agaggaggaagga 125  Q
    ||||||| |||||    
T  13132 agaggagaaagga 13120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 28236 - 28360
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||| || ||| | | |||||||| ||    
T  28236 ggtgaaagtgctttgttaggaccgaaagttgtgcaagaaactacggaaaaggttaagatgattcaagagaagatgaaggcatctcaaagtagacagaaga 28335  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  28336 gttatcatgataagaggagaaagga 28360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 4e-36; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22135597 - 22135721
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||| | |||||||||||||||| ||| ||| |||| ||    
T  22135597 ggtgaaagtgctttgttaggaccagaagttgtgcaagaaactacgaaaaaagttaagatgattcaggggaagatgaaagcgtctcagagtaggcagaaga 22135696  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  22135697 gttatcatgataagaggagaaagga 22135721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 20831434 - 20831555
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  20831434 gaaagtgctttgtttgggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 20831533  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  20831534 atcatgataagaggagaaagga 20831555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 20914527 - 20914423
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||| ||| |||||    
T  20914527 gaaagtgctatgttagaaccggaagttgtgcaagagactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagagagaagagtt 20914428  T
Q  104 atcat 108  Q
    |||||    
T  20914427 atcat 20914423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 46519020 - 46518917
Alignment:
Q  22 ccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggagga 121  Q
    ||||||||||||||||| | ||||||||| |||||||||||||| |||||||| ||  ||||| ||| |||||||| ||| ||||||| |||||||||||    
T  46519020 ccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagattaagacgtctcagagtagacagaagagctatcatgataagaggagga 46518921  T
Q  122 agga 125  Q
    ||||    
T  46518920 agga 46518917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 21202327 - 21202443
Alignment:
Q  2 gtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggag 101  Q
    |||||||||||||||||| ||||  ||||||||||| || ||  || || ||||||||||||||||||||||||||||| ||| |||  || |||| |||    
T  21202327 gtgaaagtgctttgttagaaccgagagttgtgcaagggactatagagaaggttaagatgattcaagagaagatgaaagcatctcagagaaggcagaagag 21202426  T
Q  102 ttatcatggtaagagga 118  Q
    |||||||| ||||||||    
T  21202427 ttatcatgataagagga 21202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 20184499 - 20184381
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| ||||||||||||| |||| || ||||||| || | | ||||| |||||||| ||||||||||||  || |||| ||| ||| |||| |||||    
T  20184499 gaaagtgatttgttaggaccgaaagtggtacaagagactatgaagaaagtgaagatgatccaagagaagatgtgagtgtctcagagtaggcagaagagtt 20184400  T
Q  104 atcatggtaagaggaggaa 122  Q
    || ||| ||||||||||||    
T  20184399 ataatgataagaggaggaa 20184381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 16078739 - 16078815
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  16078739 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 16078815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 17045102 - 17045178
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  17045102 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 17045178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 19106639 - 19106569
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggag 119  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| |||| ||||    
T  19106639 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcggag 19106569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 20250122 - 20250088
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||||||||||| ||||||||||||||    
T  20250122 aaagttaagatgattcaagaaaagatgaaagcgtc 20250088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 16369572 - 16369504
Alignment:
Q  46 gaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||| || |||||||||||||| |||||||||||||| |||| | |||| | | ||||||||| ||||    
T  16369572 gaaaaggtaaagatgattcaagaaaagatgaaagcgtcgtagagtcgacaaaagggttatcatgataag 16369504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 79
Target Start/End: Complemental strand, 20137047 - 20137020
Alignment:
Q  52 gttaagatgattcaagagaagatgaaag 79  Q
    ||||||||||||||||||||||||||||    
T  20137047 gttaagatgattcaagagaagatgaaag 20137020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 21747803 - 21747772
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||| ||||||||||||||    
T  21747803 gttaagatgattcaagaaaagatgaaagcgtc 21747772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 75; Significance: 5e-35; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 3851 - 3969
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||| | ||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  3851 agtgctttgttaggcctggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaagcgtctcagagtagacagaagagttatc 3950  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  3951 atgataagaggagaaagga 3969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 75; Significance: 5e-35; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 46484 - 46366
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||| | ||||||||    
T  46484 agtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacaaaagagttatc 46385  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  46384 atgataagaggagaaagga 46366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 5e-35; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 71552 - 71442
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||| |||||    
T  71552 gaaagtgttgtgttaggaccggaagttgtgcaagagactacggaaaaggttaagatgatccaagagaagatgaaagcgtctcagagtagacagaagagtt 71453  T
Q  104 atcatggtaag 114  Q
    |||||| ||||    
T  71452 atcatgataag 71442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 13584 - 13463
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||| |||||||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||| ||| |||| ||| ||| |    
T  13584 gaaagtgccttgttaggaccggaggttgtgcaagagactacagaaaaggttaagatgatccaagagaagatgaaagcgtctcagagtagatagaagagct 13485  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||| ||||| |||||    
T  13484 atcatgataaaaggagaaagga 13463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 26139 - 26018
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| | | |||||||| |||||    
T  26139 gaaagtgctttgtttggaccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcatagtagacagaagagtt 26040  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  26039 atcatgataagaggagaaagga 26018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 40591 - 40470
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  40591 gaaagtgctttgtttgggccggaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 40492  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  40491 atcatgataagaggagaaagga 40470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 71; Significance: 1e-32; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 98345 - 98227
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||| |||||||||||| |||||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  98345 agtgttttgttaggaccagaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagttatc 98246  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  98245 atgataagaggagtaagga 98227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 5e-32; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 106546 - 106667
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||| |||||||||||||| ||| ||| |||||| | || ||    
T  106546 gaaagtgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaggatgattcaggagaagatgaaagcatctcagagtagacataagattt 106645  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  106646 atcatgataagaggagaaagga 106667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 43442 - 43408
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  43442 aaagttaagatgattcaagagaaaatgaaagcgtc 43408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 8806 - 8739
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||  |||| ||  ||| ||| || |||||| |||||||||||||||| |||||||||||    
T  8806 ttaggaccggagattgttcagcagactactgagaaagttcagatgattcaagagaaaatgaaagcgtc 8739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 70; Significance: 5e-32; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 121923 - 122044
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| |||||||||| |||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||| |||||| ||| |||||||| |||||    
T  121923 gaaagtgttttgttaggaacggaagttgtgcaagaaattacggaaaaggttaacatgattcaggagaagatgaaggcgtctcagagtagacagaagagtt 122022  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  122023 atcatgataagaggagaaagga 122044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 180257 - 180142
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    ||||||| ||||||||||||| ||||||||||||| | ||||||||| |||||||||||||| |||||||||||  ||||| ||| |||||||| |||||    
T  180257 gaaagtgttttgttaggaccgcaagttgtgcaagaaactacggaaaaggttaagatgattcaggagaagatgaagtcgtctcagagtagacagaagagtt 180158  T
Q  104 atcatggtaagaggag 119  Q
    |||||| |||||||||    
T  180157 atcatgataagaggag 180142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 26554 - 26585
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||| ||||||||||||||    
T  26554 gttaagatgattcaagaaaagatgaaagcgtc 26585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 70; Significance: 5e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 78602 - 78723
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||| |||| |||||||||  |||||||||| || ||| |||||||||||| |||||    
T  78602 gaaagtgctttgttaggatcgaaagttgtgcaagagactacggaaaaggttatgatgattcagtagaagatgaaggcatctcagattagacagaagagtt 78701  T
Q  104 atcatggtaagaggaggaagga 125  Q
    |||||| ||||||||| |||||    
T  78702 atcatgataagaggagaaagga 78723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 69; Significance: 2e-31; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26127 - 26251
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||| ||||||||||||  |||||||||||||| | ||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||| ||    
T  26127 ggtgaaagttctttgttaggactagaagttgtgcaagaaactacggaaaaggttaagatgattcaggaaaagatgaaggcgtctcagagtagacagaaga 26226  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||||| |||||    
T  26227 gttatcatgataagaggagaaagga 26251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 69; Significance: 2e-31; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 7788 - 7904
Alignment:
Q  9 tgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcat 108  Q
    ||||||||||||||| |||||||||||||| | | ||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||| ||| ||||||    
T  7788 tgctttgttaggaccagaagttgtgcaagaaactgcggaaaaggttaagatgattcaggagaagatgaaggcgtctcagagtagacagaagagctatcat 7887  T
Q  109 ggtaagaggaggaagga 125  Q
    | |||||||||||||||    
T  7888 gataagaggaggaagga 7904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 67; Significance: 3e-30; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 3920 - 4038
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||| |||||| | | |||||| | ||||||||    
T  3920 agtgctttgttaagaccggaagttgtgcaagagactacgaaaaaggttaagatgattcaggagaagatgaaggcgtctcaaagtagacataagagttatc 4019  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  4020 atgataagaggagaaagga 4038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 3e-30; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 32971 - 33089
Alignment:
Q  7 agtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatc 106  Q
    |||||||||||||| || |||||||||||||| | ||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||| ||||||||    
T  32971 agtgctttgttaggcccagaagttgtgcaagaaactacggaaaaggttaagatgattcaggaaaagatgaaggcgtctcagagtagacagaagagttatc 33070  T
Q  107 atggtaagaggaggaagga 125  Q
    ||| ||||||||| |||||    
T  33071 atgataagaggagaaagga 33089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 219438 - 219500
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  219438 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 219500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 229328 - 229297
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||| ||||||||||||||    
T  229328 gttaagatgattcaagaaaagatgaaagcgtc 229297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 64; Significance: 2e-28; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 24215 - 24092
Alignment:
Q  2 gtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggag 101  Q
    |||| ||||||||||||||||| |||||||| ||||||| || |||||| |||||||||||||| |||||||| ||||| ||| | | |||||||| |||    
T  24215 gtgagagtgctttgttaggaccagaagttgtccaagagactatggaaaaggttaagatgattcaggagaagattaaagcatctcaaagtagacagaagag 24116  T
Q  102 ttatcatggtaagaggaggaagga 125  Q
    |||||||| ||||||||| |||||    
T  24115 ttatcatgataagaggagaaagga 24092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 231894 - 231770
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||| ||| |||||||||| ||||||||||||| || ||| || |||||||||||||||| |||||||  || |||||||| ||  |||| ||    
T  231894 ggtgaaagtgcattgctaggaccggaggttgtgcaagagactaaggataaggttaagatgattcaagggaagatgggagtgtcttagagtaagcagaaga 231795  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    ||||||||| ||||||| |||||||    
T  231794 gttatcatgataagaggcggaagga 231770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 61; Significance: 1e-26; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10992 - 10868
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagagga 100  Q
    ||||||||||| |||||||||||| | ||||||||||||  |||  |||| ||||||||||||||||||||||||| ||||||| | | ||| |||| ||    
T  10992 ggtgaaagtgcgttgttaggaccgtaggttgtgcaagaggctacaaaaaatgttaagatgattcaagagaagatgagagcgtctcatagtaggcagaaga 10893  T
Q  101 gttatcatggtaagaggaggaagga 125  Q
    |||| |||| |||||||||||||||    
T  10892 gttaccatgataagaggaggaagga 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 58; Significance: 8e-25; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 346 - 427
Alignment:
Q  44 cggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||| ||||||||||| |||||||||||||||    
T  346 cggaaaaagttaagatgattcaagagaagatgaaagcatctcagagtaggcagaagagttatcatgataagaggaggaagga 427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 57; Significance: 3e-24; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 14470 - 14370
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagtt 103  Q
    |||||| ||||||||||||||||||| |||||||| | |||| ||||||||||||||| ||||||||| |||||||| ||| ||| |||||||| |||||    
T  14470 gaaagttctttgttaggaccggaagtcgtgcaagaaactacgaaaaaagttaagatgaatcaagagaaaatgaaagcatctcagagtagacagaagagtt 14371  T
Q  104 a 104  Q
    |    
T  14370 a 14370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 46; Significance: 1e-17; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 2889 - 2828
Alignment:
Q  4 gaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattca 65  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  2889 gaaagcgctttgttaggaccggaagttgtgcaagaaactacggaaaaggttaagatgattca 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 7e-16; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 39840 - 39902
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||| ||||    
T  39840 gttaagatgattcaagagaagatgaaagcgtcgtagagtcgacagaagagttatcatgataag 39902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 65693 - 65628
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| ||||    
T  65693 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 65628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 712 - 777
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||| | ||||||||||| ||||    
T  712 aaagttaagatgattcaagagaagatgaaagcgtcgtagagtcgacaaaagagttatcatgataag 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21934 - 21877
Alignment:
Q  1 ggtgaaagtgctttgttaggaccggaagttgtgcaagagagtacggaaaaagttaaga 58  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||| |||||||    
T  21934 ggtgaaagtgctttgttaggaccagaggttgtgcaagagactacggaaaaggttaaga 21877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 22155 - 22079
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||| |||||||||||||||||||||||||| |||| | |||| | ||||||||||| |||| | ||||||||    
T  22155 aaagttaaaatgattcaagagaagatgaaagcgtcgtagagtcgacaaaagagttatcatgataagtgcaggaagga 22079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 18394 - 18327
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggag 119  Q
    |||||||||||||| ||||||||||| |||||| ||| ||| |||| ||||||||||| |||||||||    
T  18394 gttaagatgattcaggagaagatgaaggcgtctcagagtaggcagaagagttatcatgataagaggag 18327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 6011 - 5953
Alignment:
Q  67 gagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||| ||| |||||||| ||||||||||| ||||||||| |||||    
T  6011 gagaagatgaaagcgtctcagagtagacagaagagttatcatgataagaggagaaagga 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 10625 - 10567
Alignment:
Q  67 gagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||| ||| |||||||| ||||||||||| ||||||||| |||||    
T  10625 gagaagatgaaagcgtctcagagtagacagaagagttatcatgataagaggagaaagga 10567  T

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Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 8620 - 8562
Alignment:
Q  67 gagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||||||| ||| |||||||| ||||||||||| ||||||||| |||||    
T  8620 gagaagatgaaagcgtctcagagtagacagaagagttatcatgataagaggagaaagga 8562  T

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Target: scaffold0234 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 16211 - 16265
Alignment:
Q  71 agatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    |||||||||||||| ||| |||||||| ||||||||||| |||||||||||||||    
T  16211 agatgaaagcgtctcagagtagacagaagagttatcatgataagaggaggaagga 16265  T

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Target: scaffold0375 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 3737 - 3802
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  3737 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 3802  T

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Target: scaffold0020 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 180505 - 180440
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  180505 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 180440  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 14648 - 14572
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||||||||| |||||||||||  ||| | |||| | ||||||||||| |||| | ||||||||    
T  14648 aaagttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataagcgcaggaagga 14572  T

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Target: scaffold0676 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 6302 - 6243
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcat 108  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||    
T  6302 aaagttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcat 6243  T

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Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 5512 - 5445
Alignment:
Q  46 gaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaa 113  Q
    ||||| ||||||||||||||||| ||||||||||||||  ||| | |||| | |||||||||||||||    
T  5512 gaaaaggttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatggtaa 5445  T

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Target: scaffold1068 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 818 - 896
Alignment:
Q  47 aaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||||||||||||||| | || |||||||| || ||| ||| ||| |||| || |||||||| |||||||||||||||    
T  818 aaaaagttaagatgatttaggaaaagatgaatgcatctcagagtaggcagaagatttatcatgataagaggaggaagga 896  T

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Target: scaffold0476 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 9628 - 9566
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||| ||||| |||| | |||| | ||||||||||| ||||    
T  9628 gttaagatgattcaagagaagatgaaggcgtcgtagagtcgacaaaagagttatcatgataag 9566  T

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Target: scaffold0106 (Bit Score: 35; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 14324 - 14262
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  14324 gttaagatgattcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 14262  T

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Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 17730 - 17696
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  17730 aaagttaagatgattcaagagaaaatgaaagcgtc 17696  T

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Target: scaffold0091 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 8075 - 8013
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||| |||||||||||  ||| | |||||| ||||||||||| ||||    
T  8075 gttaagatgattcaagagaaaatgaaagcgtcgcagagtcgacagaagagttatcatgataag 8013  T

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Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 15162 - 15100
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| ||||||||||||||| ||| | |||| | ||||||||||| ||||    
T  15162 gttaagatgattcaagaaaagatgaaagcgtctcagagtcgacatatgagttatcatgataag 15100  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 127220 - 127282
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||||||||||||||   ||| | |||||| ||||||||||| ||||    
T  127220 gttaagatgattcaagagaagatgaaagcgttccagagtcgacagaagagttatcatgataag 127282  T

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Target: scaffold0216 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 798 - 863
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||| |||||||||||||||| ||||||||||| |||| | |||| | ||||||||||| ||||    
T  798 aaagttcagatgattcaagagaaaatgaaagcgtcgtagagtcgacaaaagagttatcatgataag 863  T

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Target: scaffold1710 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 940 - 1004
Alignment:
Q  61 attcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaagaggaggaagga 125  Q
    ||||| ||||||||||| |||||| ||| |||||| | ||||||||||| ||||||||| |||||    
T  940 attcaggagaagatgaaggcgtctcagagtagacataagagttatcatgataagaggagaaagga 1004  T

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Target: scaffold0739 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 290 - 230
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    ||||||||||||| |||||||||||||||||||||  ||| | |||| | |||||||||||    
T  290 aaagttaagatgagtcaagagaagatgaaagcgtcgcagagtcgacaaaagagttatcatg 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 841 - 901
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    ||||||||||||||||||||||||||| |||||||  ||| | |||| | |||||||||||    
T  841 aaagttaagatgattcaagagaagatggaagcgtcacagagtcgacaaaagagttatcatg 901  T

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Target: scaffold1355 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 964 - 930
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||||||||||| ||||||||||||||    
T  964 aaagttaagatgattcaagaaaagatgaaagcgtc 930  T

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Target: scaffold0546 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 4390 - 4488
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||  |||| ||| ||| ||| || ||||||||||||||||||||||| ||||| |||||  ||| | |||| | ||||||||||| ||||    
T  4390 ttaggaccagagattgttcaacagactaccgagaaagttaagatgattcaagagaaaatgaaggcgtcgcagagtcgacaaaagagttatcatgataag 4488  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 12775 - 12741
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  12775 aaagttaagatgattcaagagaaaatgaaagcgtc 12741  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 16437 - 16499
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  16437 gttaagatgattcaagaaaagatgaaagcgtcgcagactcgacaaaagagttatcatgataag 16499  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 8917 - 8819
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||  |||| ||| ||| ||| || ||||||||||||||||||||||| ||||| |||||  ||| | |||| | ||||||||||| ||||    
T  8917 ttaggaccagagattgttcaacagactaccgagaaagttaagatgattcaagagaaaatgaaggcgtcgcagagtcgacaaaagagttatcatgataag 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 33558 - 33656
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||| ||  |||| ||| ||| ||| || ||||||||||||||||||||||| ||||| |||||  ||| | |||| | ||||||||||| ||||    
T  33558 ttaggaccagagattgttcaacagactaccgagaaagttaagatgattcaagagaaaatgaaggcgtcgcagagtcgacaaaagagttatcatgataag 33656  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 7685 - 7651
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||||||||| |||||||||||    
T  7685 aaagttaagatgattcaagagaaaatgaaagcgtc 7651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 64053 - 64083
Alignment:
Q  53 ttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||||||||||||||||||||||    
T  64053 ttaagatgattcaagagaagatgaaagcgtc 64083  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 164730 - 164792
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    ||||||||||||||||| ||||||||||||||  ||| | |||| | ||||||||||| ||||    
T  164730 gttaagatgattcaagaaaagatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 164792  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 278848 - 278913
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||||||||||||||||| || |||||||||||  ||| | |||| | ||||||||||| ||||    
T  278848 aaagttaagatgattcaagaaaaaatgaaagcgtcgcagagtcgacaaaagagttatcatgataag 278913  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 109829 - 109894
Alignment:
Q  49 aaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatggtaag 114  Q
    |||||| ||||||| |||||||| |||||||||||  ||| | |||||| ||||||||||| ||||    
T  109829 aaagttcagatgatccaagagaaaatgaaagcgtcgcagagtcgacagaagagttatcatgataag 109894  T

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Target: scaffold0894 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 1424 - 1393
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    ||||||||||||||||| ||||||||||||||    
T  1424 gttaagatgattcaagataagatgaaagcgtc 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 7698 - 7631
Alignment:
Q  16 ttaggaccggaagttgtgcaagagagtacggaaaaagttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||   ||| ||| ||| ||| || |||||| |||||||||||||||| |||||||||||    
T  7698 ttaggaccggagactgttcaacagactactgagaaagttcagatgattcaagagaaaatgaaagcgtc 7631  T

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Target: scaffold0403 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 6657 - 6626
Alignment:
Q  52 gttaagatgattcaagagaagatgaaagcgtc 83  Q
    |||||||||||||||||| |||||||||||||    
T  6657 gttaagatgattcaagagtagatgaaagcgtc 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 322999 - 322932
Alignment:
Q  42 tacggaaaaagttaagatgattcaagagaagatgaaagcgtcttagattagacagaggagttatcatg 109  Q
    |||||| ||||| ||||||||   ||||||||||||||||||  ||| | |||||| |||||||||||    
T  322999 tacggagaaagtcaagatgatcagagagaagatgaaagcgtcgcagagtcgacagaagagttatcatg 322932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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