View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5846-6 (Length: 140)

Name: Solexa-NF5846-6
Description: NF5846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5846-6
Solexa-NF5846-6
[»] scaffold0357 (1 HSPs)
scaffold0357 (2-140)||(14538-14676)
[»] chr7 (14 HSPs)
chr7 (2-140)||(45146529-45146667)
chr7 (2-137)||(14936320-14936455)
chr7 (2-140)||(21674692-21674830)
chr7 (2-137)||(15363913-15364048)
chr7 (2-140)||(17923653-17923791)
chr7 (3-140)||(4439902-4440039)
chr7 (2-140)||(12193529-12193667)
chr7 (2-137)||(7823873-7824008)
chr7 (2-137)||(13378671-13378806)
chr7 (2-137)||(27107936-27108071)
chr7 (3-131)||(12368744-12368871)
chr7 (2-140)||(13353124-13353262)
chr7 (7-140)||(17145417-17145550)
chr7 (9-128)||(23641497-23641616)
[»] chr3 (11 HSPs)
chr3 (6-138)||(6712791-6712923)
chr3 (2-137)||(8274791-8274926)
chr3 (2-131)||(13975443-13975572)
chr3 (2-137)||(6153231-6153366)
chr3 (2-140)||(18748283-18748416)
chr3 (2-130)||(17192707-17192835)
chr3 (2-137)||(15576363-15576498)
chr3 (3-137)||(16743095-16743229)
chr3 (3-106)||(267681-267784)
chr3 (80-140)||(21686636-21686696)
chr3 (2-53)||(21686588-21686639)
[»] chr4 (10 HSPs)
chr4 (2-140)||(12132559-12132697)
chr4 (2-131)||(13247629-13247758)
chr4 (2-137)||(14997300-14997435)
chr4 (2-137)||(15293310-15293445)
chr4 (2-137)||(16445365-16445500)
chr4 (2-119)||(55375529-55375646)
chr4 (2-131)||(9290819-9290948)
chr4 (2-82)||(37955999-37956078)
chr4 (2-136)||(16685238-16685372)
chr4 (3-53)||(12343073-12343123)
[»] chr6 (14 HSPs)
chr6 (2-137)||(14129308-14129443)
chr6 (2-137)||(16233057-16233192)
chr6 (2-137)||(23996096-23996231)
chr6 (2-137)||(25655331-25655466)
chr6 (2-137)||(15078662-15078797)
chr6 (6-131)||(18838212-18838337)
chr6 (2-137)||(1649082-1649217)
chr6 (2-137)||(16382671-16382806)
chr6 (2-137)||(18571499-18571634)
chr6 (2-137)||(25743385-25743520)
chr6 (12-137)||(16097909-16098033)
chr6 (4-92)||(17813573-17813661)
chr6 (7-108)||(21413330-21413431)
chr6 (2-119)||(23124035-23124152)
[»] scaffold0017 (1 HSPs)
scaffold0017 (11-140)||(13984-14113)
[»] scaffold0610 (1 HSPs)
scaffold0610 (2-137)||(9047-9182)
[»] chr2 (9 HSPs)
chr2 (2-140)||(25128262-25128400)
chr2 (2-140)||(28144578-28144716)
chr2 (2-137)||(12640612-12640747)
chr2 (2-137)||(22275894-22276029)
chr2 (2-131)||(22762268-22762397)
chr2 (2-137)||(24570361-24570496)
chr2 (2-137)||(23817786-23817921)
chr2 (2-137)||(24831880-24832015)
chr2 (57-140)||(21908981-21909064)
[»] scaffold0109 (1 HSPs)
scaffold0109 (2-137)||(44602-44737)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-137)||(28422-28557)
[»] scaffold0692 (1 HSPs)
scaffold0692 (2-137)||(4031-4166)
[»] scaffold0554 (1 HSPs)
scaffold0554 (2-137)||(3174-3309)
[»] scaffold0551 (1 HSPs)
scaffold0551 (2-137)||(8110-8245)
[»] scaffold0132 (2 HSPs)
scaffold0132 (2-137)||(14672-14807)
scaffold0132 (2-137)||(43553-43688)
[»] chr1 (6 HSPs)
chr1 (2-137)||(46518720-46518855)
chr1 (2-137)||(22142266-22142401)
chr1 (2-137)||(20831617-20831752)
chr1 (2-137)||(20914209-20914344)
chr1 (2-140)||(21202509-21202647)
chr1 (76-137)||(20184254-20184315)
[»] chr8 (10 HSPs)
chr8 (3-137)||(16877691-16877825)
chr8 (2-131)||(21850939-21851068)
chr8 (2-131)||(21197104-21197233)
chr8 (2-137)||(20652929-20653064)
chr8 (10-137)||(22315249-22315376)
chr8 (2-137)||(23150998-23151133)
chr8 (2-137)||(22982486-22982621)
chr8 (21-138)||(24094211-24094328)
chr8 (2-106)||(25282180-25282285)
chr8 (7-138)||(24818211-24818342)
[»] chr5 (6 HSPs)
chr5 (3-137)||(24581110-24581244)
chr5 (2-137)||(11211029-11211164)
chr5 (2-137)||(27010983-27011117)
chr5 (2-131)||(23503341-23503470)
chr5 (2-137)||(21937523-21937658)
chr5 (71-140)||(24516526-24516595)
[»] scaffold1710 (1 HSPs)
scaffold1710 (2-137)||(1066-1201)
[»] scaffold0808 (1 HSPs)
scaffold0808 (2-137)||(1210-1345)
[»] scaffold0066 (1 HSPs)
scaffold0066 (2-137)||(46169-46304)
[»] scaffold0037 (2 HSPs)
scaffold0037 (2-137)||(98030-98165)
scaffold0037 (2-137)||(23622-23757)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-137)||(23895-24030)
scaffold0008 (5-140)||(231576-231711)
[»] scaffold0305 (1 HSPs)
scaffold0305 (2-140)||(10671-10809)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-128)||(106738-106864)
[»] scaffold0225 (1 HSPs)
scaffold0225 (2-137)||(23409-23544)
[»] scaffold0615 (1 HSPs)
scaffold0615 (2-131)||(5189-5318)
[»] scaffold0507 (1 HSPs)
scaffold0507 (5-137)||(489-621)
[»] scaffold0761 (1 HSPs)
scaffold0761 (2-137)||(542-677)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-137)||(40273-40408)
[»] scaffold0021 (2 HSPs)
scaffold0021 (2-137)||(13266-13401)
scaffold0021 (10-137)||(6333-6460)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-137)||(122106-122241)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-137)||(78785-78920)
[»] scaffold0387 (1 HSPs)
scaffold0387 (3-137)||(14146-14280)
[»] scaffold0447 (2 HSPs)
scaffold0447 (12-137)||(5766-5891)
scaffold0447 (12-137)||(10380-10505)
[»] scaffold0383 (1 HSPs)
scaffold0383 (12-137)||(8375-8500)
[»] scaffold0117 (1 HSPs)
scaffold0117 (2-131)||(10471-10600)
[»] scaffold0589 (1 HSPs)
scaffold0589 (3-137)||(9003-9137)
[»] scaffold0310 (2 HSPs)
scaffold0310 (15-137)||(14893-15014)
scaffold0310 (2-83)||(5370-5451)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-136)||(22716-22843)
[»] scaffold0218 (1 HSPs)
scaffold0218 (2-137)||(4100-4235)
[»] scaffold0162 (1 HSPs)
scaffold0162 (2-137)||(12923-13058)
[»] scaffold0124 (1 HSPs)
scaffold0124 (3-137)||(7966-8101)
[»] scaffold0234 (1 HSPs)
scaffold0234 (3-137)||(16327-16460)
[»] scaffold0012 (1 HSPs)
scaffold0012 (2-137)||(33151-33285)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-131)||(370302-370430)
[»] scaffold0160 (1 HSPs)
scaffold0160 (2-69)||(1201-1268)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-53)||(78364-78415)
[»] scaffold0058 (1 HSPs)
scaffold0058 (85-140)||(73998-74053)
[»] scaffold1068 (1 HSPs)
scaffold1068 (2-53)||(1007-1058)


Alignment Details
Target: scaffold0357 (Bit Score: 107; Significance: 5e-54; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 14538 - 14676
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||||||| |||||    
T  14538 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacctcaaacggtccaac 14637  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  14638 aaaacgaggagtcaacttccgacacttcaaagcacgtcc 14676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 5e-54; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 45146529 - 45146667
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||| ||||||||||||||||||||||||| |||||    
T  45146529 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgtaatccgatacgctaaaaccccaaccttctcaataatctcaaacggtccaac 45146628  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  45146629 aaaatgaggagtcaactttcgacacttcaaagcacgtcc 45146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 14936320 - 14936455
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||||||| || ||    
T  14936320 gagacacatgaaacacatcatgaagattcgataaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacctcaaacggtcccac 14936419  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||| |||||||||||| ||||||||||| |||||    
T  14936420 aaaacaaggagtcaacttccgacacttcaaagcacg 14936455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 21674830 - 21674692
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||| |||||||||||||||||||||| || |||||    
T  21674830 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaacgcaatccgatacgctgcaaccccaaccttctcaataatctcaaaaggtccaac 21674731  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||||||| ||   ||||||||| ||||||||    
T  21674730 aaaacgaggagtcaatttcttacacttcaaagcacgtcc 21674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 15363913 - 15364048
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||||||| || ||    
T  15363913 gagacacatgaaacacatcatgaagattctataaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacctcaaacggtcccac 15364012  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||| |||||||||||| ||||||||||| |||||    
T  15364013 aaaacaaggagtcaacttccgacacttcaaagcacg 15364048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 17923653 - 17923791
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||| ||||||  ||||||| ||||| ||||||||||||||||||||||||| |||||    
T  17923653 gagacacatgaaacacatcatgtaaattcgacaaaggcggtggtaacgcaatccgatacgctgcaaccccaaccttctcaataatctcaaacggtccaac 17923752  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||||||| ||   ||||||||| ||||||||    
T  17923753 aaaacgaggagtcaatttcttacacttcaaagcacgtcc 17923791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 4439902 - 4440039
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||  |||||||||||||||||||||| || |||| |    
T  4439902 agacacatgaaacacatcatgtaaatttgacaaagacggtggtaacgcaatctgatacgctacaactgcaaccttctcaataatctcaaatggtccaata 4440001  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||||||||| | ||||||||| ||||||||    
T  4440002 aaacgaggagtcaacttcctacacttcaaagcacgtcc 4440039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 12193529 - 12193667
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||| | ||||  ||| ||||||||| |||||||||||| |||||||||||| |||||    
T  12193529 gagacacatgaaacacatcatgaagattcgacaaatatcgtggtaacgtaatccgatatgctacaaccccaaccttctcaacaatctcaaacggtccaac 12193628  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||||||| || || ||||| ||||||||    
T  12193629 aaaacgaggagtcaacttccggcatttcaaagcacgtcc 12193667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 7823873 - 7824008
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  7823873 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacggcccaac 7823972  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||||| || |||||    
T  7823973 aaaacgaggagtcaacttcctacactttaaagcacg 7824008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 13378671 - 13378806
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||| |||||||| ||||| |||||| ||  |||||||| |||||    
T  13378671 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaacgaaatccgatacactacaaccccaaccgtctcaacaacatcaaacggtccaac 13378770  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||| |||||||||||| ||||| ||||| |||||    
T  13378771 aaaacaaggagtcaacttccgacaattcaaagcacg 13378806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 27108071 - 27107936
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  27108071 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacggcccaac 27107972  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||||| || |||||    
T  27107971 aaaacgaggagtcaacttcctacactttaaagcacg 27107936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 12368871 - 12368744
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||  ||||||||||||| ||||||| |||||||  |||||||| |||||     
T  12368871 agacacatgaaacacatcatgaagatttgacaaagacggtggcaatgtaatccgatacgctacaaccccaaccttatcaataacatcaaacggtccaac- 12368773  T
Q  103 aaacgaggagtcaactttcgacacttcaa 131  Q
    ||||||||||||||||| | |||||||||    
T  12368772 aaacgaggagtcaacttcctacacttcaa 12368744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 13353124 - 13353262
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||| |||||||| ||||| |  ||| |||||||||||||||| ||||||  |||| |||||||| ||||||||||||||| || ||| || |||||    
T  13353124 gagacacgtgaaacacgtcatgtaagttcaacaaagacggtggtaacgcaatccgatacactacaaccccaaccttctcaataagcttaaatggtccaac 13353223  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  13353224 aaaacgaggagtcaactttcaacacttcaaagcacgtcc 13353262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 17145550 - 17145417
Alignment:
Q  7 acatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaac 106  Q
    ||||||||||||||||||||||| ||||| || || |||||  |||||  ||||||||||||  |||| |||| ||||||||||||||| |||| |||||    
T  17145550 acatgaaacacatcatgaagatttgacaacgatggcggtaacacaatccgatacgctacaactccaacattctaaataatctcaaacggtccaataaaac 17145451  T
Q  107 gaggagtcaactttcgacacttcaacgcacgtcc 140  Q
      || |||||||| ||||||| |||  |||||||    
T  17145450 agggtgtcaacttccgacactccaaaacacgtcc 17145417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 23641497 - 23641616
Alignment:
Q  9 atgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacga 108  Q
    |||||| | |||||||||||||||||| || || || || ||||||  |||||||||| |  |||||||||| |||||||||||||| |||| ||||||     
T  23641497 atgaaataaatcatgaagattcgacaatgatggcggcaacgcaatccgatacgctacagctccaaccttctctataatctcaaacggtccaataaaacgc 23641596  T
Q  109 ggagtcaactttcgacactt 128  Q
     | |||||||||||||||||    
T  23641597 agtgtcaactttcgacactt 23641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 8e-53; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 6712923 - 6712791
Alignment:
Q  6 cacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6712923 cacatgaaacacatcatgaagattcgacaaagacggtggtaacacaatctgatacgctacaaccccaaccttctcaataatctcaaacggaccaacaaaa 6712824  T
Q  106 cgaggagtcaactttcgacacttcaacgcacgt 138  Q
    |||||||||||||| ||||||||||| ||||||    
T  6712823 cgaggagtcaacttccgacacttcaaagcacgt 6712791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 8274926 - 8274791
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  8274926 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggcccaac 8274827  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  8274826 aaaacgaggagtcaacttcctacacttcaaagcacg 8274791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 13975572 - 13975443
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  13975572 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggcccaac 13975473  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
     ||||||||||||||||| | |||||||||    
T  13975472 gaaacgaggagtcaacttcctacacttcaa 13975443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 6153366 - 6153231
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||| ||||| ||||| |||||||||  ||||||||||||||| |||||||||||||  |||||||| || ||    
T  6153366 gagacacatgaaacacattatgaagattcgaaaaagatggtggcaatgcaatccgatacgctacaacctcgaccttctcaataacatcaaacggtccgac 6153267  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||||||  |||||||| |||||    
T  6153266 aaaacgaggagtcaactttctgcacttcaaagcacg 6153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 18748283 - 18748416
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||     || |||||||  |||||||| ||||||||||||||| |||||    
T  18748283 gagacacatgaaacacaccatgcagattcgacaaagacggtgctaacgcaatc-----cgatacaaccctaaccttcttaataatctcaaacggtccaac 18748377  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18748378 aaaacgaggagtcaactttcgacacttcaaagcacgtcc 18748416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 17192707 - 17192835
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||  ||||||   |||||||||||| |||||||||||| ||  ||||| || |||||    
T  17192707 gagacacatgaaacacatcatgaagatttgacaaagacagtggtagcgcaatccggtacgctacaaccccaaccttctcaacaacatcaaaaggcccaac 17192806  T
Q  102 aaaacgaggagtcaactttcgacacttca 130  Q
    |||||||||||||||||| ||||||||||    
T  17192807 aaaacgaggagtcaacttccgacacttca 17192835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 15576363 - 15576498
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   || ||||||||| ||||||||||||| |  |||||| | |||||    
T  15576363 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtatgctacaaccccaaccttctcaatcacatcaaacagcccaac 15576462  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  15576463 aaaacgaggagtcaacttcctacacttcaaagcacg 15576498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 16743229 - 16743095
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    |||||||||||| |||| ||||||||| ||||||||| |||||||  |||||  ||||||||||||| ||||||||||||| |  |||||||| ||||||    
T  16743229 agacacatgaaaaacattatgaagattggacaaagacagtggtaacacaatccaatacgctacaaccccaaccttctcaatgacatcaaacggtccaaca 16743130  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||| | ||||||||| |||||    
T  16743129 aaacgaggagtcaacttcctacacttcaaagcacg 16743095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 267784 - 267681
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctaca-acctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||| || ||||||||||| ||| ||||| ||||  ||||||  |||||||||  | || |||||||||||||||||||||||| |||||    
T  267784 agacacatgaaacaaataatgaagattcggcaacgacggcggtagcgcaatccgatacgctactgatct-aaccttctcaataatctcaaacggtccaac 267686  T
Q  102 aaaac 106  Q
    |||||    
T  267685 aaaac 267681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 21686636 - 21686696
Alignment:
Q  80 caataatctcaaacggaccaacaaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||| | |||||||||| ||| |||||||||||||||||||| ||||||||    
T  21686636 caataatctcaaacagtccaacaaaacaaggtgtcaactttcgacacttcaaagcacgtcc 21686696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 21686588 - 21686639
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaat 53  Q
    |||| ||||||||||||||||||||||| ||||| ||||  ||||| |||||    
T  21686588 gagatacatgaaacacatcatgaagattagacaacgacgacggtaacgcaat 21686639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 1e-51; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 12132697 - 12132559
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||| |||||||||| |||||||| ||||| |||||    
T  12132697 gagacacatgaaacacatcatgaggattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctccataatctccaacggtccaac 12132598  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  12132597 aaaacgaggagtcaactttcgacacttcaaagcacgtcc 12132559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 13247629 - 13247758
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  13247629 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 13247728  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||||||| | |||||||||    
T  13247729 aaaacgaggagtcaacttcctacacttcaa 13247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 14997300 - 14997435
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  14997300 gagacacatgaagcacattatgaagattcgacaaagacggtggtaatgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 14997399  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  14997400 aaaacgaggagtcaacttcctacacttcaaagcacg 14997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 15293445 - 15293310
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  15293445 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 15293346  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  15293345 aaaacgaggagtcaacttcctacacttcaaagcacg 15293310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 16445500 - 16445365
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  16445500 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 16445401  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  16445400 aaaacgaggagtcaacttcctacacttcaaagcacg 16445365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 55375646 - 55375529
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  55375646 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 55375547  T
Q  102 aaaacgaggagtcaactt 119  Q
    |||||||| |||||||||    
T  55375546 aaaacgagaagtcaactt 55375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 9290819 - 9290948
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||| |||||   ||||||||||||| |||||||||||||||  |||||||| |||||    
T  9290819 gagacacatgaaacacattatgaagattctacaaagatggtggtaacgcaatttgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 9290918  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
     ||||||||||||||||| | |||||||||    
T  9290919 gaaacgaggagtcaacttcctacacttcaa 9290948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 37956078 - 37955999
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaa 82  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  37956078 gagacacataaaacacatcatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaacc-caaccttctcaa 37955999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 16685238 - 16685372
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| |||| ||||||||||||||||||| || | ||||| ||||| ||| ||  ||||  || | | ||||||||||| |||||||||||||| |||||    
T  16685238 gagatacataaaacacatcatgaagattcaacgacgacggcggtaacgcagtctgatacaatatagcttcaaccttctctataatctcaaacggcccaac 16685337  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcac 136  Q
    |||||| || |||||||| | ||||||||| ||||    
T  16685338 aaaacgcggtgtcaacttccaacacttcaaagcac 16685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 12343123 - 12343073
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaat 53  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  12343123 agacacatgaaacacatcttgaagatttgacaaagacggtggtaacgcaat 12343073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 8e-50; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 14129308 - 14129443
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  14129308 gagacacatgaaacacatcatgaagattcaacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 14129407  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||||||||||||||| |||||    
T  14129408 aaaacgaggagtcaactttcgacacttcaaagcacg 14129443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 16233057 - 16233192
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  16233057 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 16233156  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||| |||||||| | |||||||||||||||    
T  16233157 aaaacgaggtgtcaacttcctacacttcaacgcacg 16233192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23996096 - 23996231
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  23996096 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 23996195  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  23996196 aaaacgaggagtcaacttcctacacttcaaagcacg 23996231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 25655331 - 25655466
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||| || |||||    
T  25655331 gagacacatgaaacacatcatgaagattcaacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataatctcaaatggtccaac 25655430  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||| ||||| ||||| ||||| ||||| |||||    
T  25655431 aaaacggggagttaacttccgacagttcaaagcacg 25655466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 15078797 - 15078662
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| |||||||||||| ||  |||||||| |||||    
T  15078797 gagatacatgaaacacatcatgaagatttgacaaagacggtggtaacgcaatctgatacgctacaaccccaaccttctcaacaacatcaaacggtccaac 15078698  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  15078697 aaaacgaggagtcaacttcctacacttcaaagcacg 15078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 18838337 - 18838212
Alignment:
Q  6 cacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaa 105  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||||||    
T  18838337 cacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaacaaaa 18838238  T
Q  106 cgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||| | |||||||||    
T  18838237 cgaggagtcaacttcctacacttcaa 18838212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 1649217 - 1649082
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  1649217 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatcacatcaaacggcccaac 1649118  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  1649117 aaaacgaggagtcaacttcccacacttcaaagcacg 1649082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 16382806 - 16382671
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  16382806 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacggcccaac 16382707  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||||| || |||||    
T  16382706 aaaacgaggagtcaacttcctacactttaaagcacg 16382671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 18571499 - 18571634
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||| ||| |||| |||||||||| |||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  18571499 gagacacattaaatacattatgaagattctacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 18571598  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||| |||| | | ||||||| |||||    
T  18571599 aaaacgaggagtctacttcctatacttcaaagcacg 18571634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 25743520 - 25743385
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||| || |||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||||||||||||||  ||||| ||  ||||    
T  25743520 gagacacatgaaacatatgatgaagattcgacaaagatggtggtaacgcaatccgatatgctacaaccccaaccttctcaataacatcaaatggtgcaac 25743421  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  25743420 aaaacgaggagtcaacttcctacacttcaaagcacg 25743385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 16097909 - 16098033
Alignment:
Q  12 aaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgagga 111  Q
    ||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||| ||||||||||||| |  |||||| | |||||||||||||||    
T  16097909 aaacacatcatgaagattcgacaaagacggtggtaacacaatccgatacgctacaaccccaaccttctcaatcacatcaaac-gtccaacaaaacgagga 16098007  T
Q  112 gtcaactttcgacacttcaacgcacg 137  Q
    |||||||| | ||||||||| |||||    
T  16098008 gtcaacttcctacacttcaaagcacg 16098033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 17813573 - 17813661
Alignment:
Q  4 gacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaa 92  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||| ||  |||||||||||| ||| |||||    
T  17813573 gacacatgaaacacatcatgaagattcgacaacgacggtagtaatgcaatccgatacgctaccactccaaccttctcaacaatttcaaa 17813661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 21413431 - 21413330
Alignment:
Q  7 acatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaac 106  Q
    |||||||||||||||||||||||||||||| | ||||| || |||||   ||||||||||||| |||||||||||| ||  |||||||| | ||||||||    
T  21413431 acatgaaacacatcatgaagattcgacaaatatggtggcaacgcaatgcgatacgctacaaccccaaccttctcaacaacatcaaacggtctaacaaaac 21413332  T
Q  107 ga 108  Q
    ||    
T  21413331 ga 21413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 23124035 - 23124152
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||||||| |||||||| || ||||| |||||| |||||  ||||||||||||  | |||||||| |  ||||||||||| |||||    
T  23124035 gagatacatgaaacacatcatggagattcgataacgacggaggtaatacaatccgatacgctacaactcccaccttctctactatctcaaacggtccaac 23124134  T
Q  102 aaaacgaggagtcaactt 119  Q
    |||||| || ||||||||    
T  23124135 aaaacgtggtgtcaactt 23124152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 13984 - 14113
Alignment:
Q  11 gaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgagg 110  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||    
T  13984 gaaacacatcatgaagattcgacaaagacggtggtaacgcaatctgatacgctataaccccaaccttttcaataatctcaaacggtccaacaaaacgagg 14083  T
Q  111 agtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||||||||||||| ||||||||    
T  14084 agtcaactttcgacacttcaaagcacgtcc 14113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 96; Significance: 2e-47; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 9182 - 9047
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||| ||||||||||||||| ||||||||| |||||    
T  9182 gagatacatgaaacacatcatgaagattcgacaaagacggtggtaacgcaatccgatacactacaaccccaaccttctcaataacctcaaacggtccaac 9083  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| ||||||||||| |||||    
T  9082 aaaacgaggagtcaacttccgacacttcaaagcacg 9047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 7e-47; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 25128262 - 25128400
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  25128262 gagacacatgaaacacatcatgaagattcgataaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataatctcaaacggtccaac 25128361  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||| ||||||| ||||||||||| ||||| || |||||    
T  25128362 aaaaagaggagtaaactttcgacaattcaaagcgcgtcc 25128400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 28144578 - 28144716
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  28144578 gagaaacatgaaacacatcatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataatctcaaacggtccaac 28144677  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||| |||| ||||| | ||||||||| ||||||||    
T  28144678 aaaacgatgagttaacttcctacacttcaaagcacgtcc 28144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 12640747 - 12640612
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  12640747 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 12640648  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  12640647 aaaacgaggagtcaacttcctacacttcaaagcacg 12640612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 22275894 - 22276029
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  22275894 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 22275993  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | || |||||| |||||    
T  22275994 aaaacgaggagtcaacttcctacccttcaaagcacg 22276029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 22762397 - 22762268
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| |||||||||||| ||  |||||||| ||| |    
T  22762397 gagacacatgaaacacatcatgaagattggacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaacaacatcaaacggtccacc 22762298  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||| |||||||||||||||||||||||||    
T  22762297 aaaatgaggagtcaactttcgacacttcaa 22762268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 24570496 - 24570361
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||| ||  |||||||| |||||    
T  24570496 gagacacatgaaacacattatgaagattcgacaaagatggtggtaacgcaatccaatacgctacaaccccaaccttctcaacaacatcaaacggtccaac 24570397  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  24570396 aaaacgaggagtcaacttccaacacttcaaagcacg 24570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 23817921 - 23817786
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||| ||||||  ||||||||||||| ||||||||||||||| |||||| || || ||    
T  23817921 gagacacatgaaacacattatgaagattcggcaaagttggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacctcaaatggtcctac 23817822  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||| |||||||||||| ||||||||||| |||||    
T  23817821 aaaactaggagtcaacttccgacacttcaaagcacg 23817786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 24832015 - 24831880
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||| ||| |  |||||||| |||||    
T  24832015 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttcttaatgacatcaaacggtccaac 24831916  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  24831915 aaaacgaggagtcaacttcctacacttcaaagcacg 24831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 21909064 - 21908981
Alignment:
Q  57 atacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||||  | || ||||| ||||||||||| || ||||||||| | || |||||||| || ||||||||  |||||||    
T  21909064 atacgctacaactccgactttctctataatctcaaatggtccaacaaaatgcggtgtcaacttccggcacttcaaatcacgtcc 21908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 92; Significance: 4e-45; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 44737 - 44602
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||  |||||||| |||||    
T  44737 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaacctcaacctgctcaataacatcaaacggtccaac 44638  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  44637 aaaacgaggagtcaacttcctacacttcaaagcacg 44602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 92; Significance: 4e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 28557 - 28422
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||  |||||||| |||||    
T  28557 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatcctatacgctacaaccccaaccttctcaataacatcaaacggtccaac 28458  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||| |||||||||||||| | ||||||||| |||||    
T  28457 aaatcgaggagtcaacttcctacacttcaaagcacg 28422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 88; Significance: 1e-42; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 4166 - 4031
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  4166 gagacacatgaaacacattatgaagattcgacaaagacggtggtaatgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 4067  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
     ||||||||||||||||| | |||||| || |||||    
T  4066 taaacgaggagtcaacttcctacactttaaagcacg 4031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 88; Significance: 1e-42; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 3174 - 3309
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||  |  |||||||| |||||    
T  3174 gagacacatgaaacacatcatgaagattcgacaaagatggtggtaatgcaatccgatacgctacaaccccaaccttctcaacgacatcaaacggtccaac 3273  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  3274 aaaacgaggagtcaacttcctacacttcaaagcacg 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 88; Significance: 1e-42; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 8110 - 8245
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  8110 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 8209  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||| |||| |||||    
T  8210 aaaacgaggagtcaacttcctacacatcaaagcacg 8245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 88; Significance: 1e-42; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 14672 - 14807
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  14672 gagacacatgaaacacatcatgaagattcgacaaagatgatggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 14771  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  14772 aaaacgaggagtcaacttcctacacttcaaagcacg 14807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 43553 - 43688
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| ||||||  |||| ||||||||  ||||||||||||||  ||||| || |||||    
T  43553 gagacacatgaaacacattatgaagattcgacaaagatggtggtaacgcaatccgatacactacaaccctaaccttctcaataacatcaaatggtccaac 43652  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||| || | |||||| || |||||    
T  43653 aaaacgaggagtcaatttcctacactttaaagcacg 43688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 1e-42; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 46518720 - 46518855
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  46518720 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggcccaac 46518819  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  46518820 aaaacgaggagtcaacttcctacacttcaaagcacg 46518855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 22142401 - 22142266
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||||  ||||||||||||| ||||||||||||||| |||||| || |||||    
T  22142401 gagacacatgaaacacatcatgaagattcgacaaagacagtggtaacacaatctgatacgctacaaccccaaccttctcaataacctcaaatggtccaac 22142302  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||| |||||||||||||   ||||||||| |||||    
T  22142301 aaaatgaggagtcaacttcttacacttcaaagcacg 22142266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 20831752 - 20831617
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  20831752 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacggcccaac 20831653  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||||| || |||||    
T  20831652 aaaacgaggagtcaacttcctacactttaaagcacg 20831617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 20914209 - 20914344
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||||| |||||||| |||| |  |||||||| |||||    
T  20914209 gagacgcatgaaacacattatgaagattcgacaaagacggtggtaacgcaattcgatacgctacaaccccaaccttcacaatgacatcaaacggtccaac 20914308  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  20914309 aaaacgaggagtcaacttcctacacttcaaagcacg 20914344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 21202647 - 21202509
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||| || ||||||||||||| || || ||||| ||||||  ||||||||||||  |||| ||||| | ||||||||| || | |||    
T  21202647 gagacacatgaaacacaacaagaagattcgacaacgatggcggtaacgcaatccgatacgctacaactccaactttctcgacaatctcaaaaggtctaac 21202548  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||| |    |||||||| ||||||||||| | ||||||    
T  21202547 aaaatgcaatgtcaacttccgacacttcaaagtacgtcc 21202509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 20184254 - 20184315
Alignment:
Q  76 ttctcaataatctcaaacggaccaacaaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||| |||||||||||| ||||||||||| || |||||||| ||||||||||| |||||    
T  20184254 ttctcaacaatctcaaacggtccaacaaaacgtggtgtcaacttccgacacttcaaagcacg 20184315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 4e-42; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 16877825 - 16877691
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| ||||||    
T  16877825 agacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaaca 16877726  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||| | ||||||||| |||||    
T  16877725 aaacgaggagtcaacttcctacacttcaaagcacg 16877691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 21851068 - 21850939
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  21851068 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatctgatacgctacaaccccaaccttctcaatgacatcaaacggcccaac 21850969  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||||||| | |||||||||    
T  21850968 aaaacgaggagtcaacttcctacacttcaa 21850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 21197233 - 21197104
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||| ||||| |||||| ||  |||||||| |||||    
T  21197233 gagacacatgaaacacatcatgaagattcgacaaagacgatggtaacgcaatccgatacgctacaaccccaaccgtctcaacaacatcaaacggcccaac 21197134  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||||||| | |||||||||    
T  21197133 aaaacgaggagtcaacttcctacacttcaa 21197104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 20653064 - 20652929
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||| ||||||||||||  |  |||||||| |||||    
T  20653064 gagatacatgaaacacatcatgaagattcgacaacgatggtggtaatgcaatccgatacgctacaaccccaaccttctcaaccacatcaaacggtccaac 20652965  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
     ||||||||||||||||| | ||||||||| |||||    
T  20652964 gaaacgaggagtcaacttcctacacttcaaagcacg 20652929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 22315249 - 22315376
Alignment:
Q  10 tgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgag 109  Q
    |||||||||||||| | ||||||||| || |||||||| ||||||  ||| ||||||||| |||||||||||||||||||||| || |||||||||||||    
T  22315249 tgaaacacatcatgtaaattcgacaacgatggtggtaacgcaatccgatatgctacaaccccaaccttctcaataatctcaaatggtccaacaaaacgag 22315348  T
Q  110 gagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||| ||||||||||| |||||    
T  22315349 gagtcaacttccgacacttcaaagcacg 22315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23150998 - 23151133
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||  ||||||||||||| |||||||||||| ||  ||||| ||||||||    
T  23150998 gagacacatgaaacatatcatgaagattcgacaaagacgatggtaacgcattctgatacgctacaaccccaaccttctcaacaacatcaaaaggaccaac 23151097  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||| |||||||| |||| | |||||| || |||||    
T  23151098 aaaatgaggagtcgacttcctacactttaaagcacg 23151133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 22982486 - 22982621
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||||||||| |||||| ||||| || ||||||  ||||||||||||| |||  | ||||| ||  |||||||| || ||    
T  22982486 gagacacatgaaacacatcatgaagattcggcaaagatggtggcaacgcaatccgatacgctacaaccccaatttcctcaacaacatcaaacggtccgac 22982585  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||||  |||||||||| |||||    
T  22982586 aaaacgaggagtcaacttctgacacttcaaagcacg 22982621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 24094211 - 24094328
Alignment:
Q  21 atgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgaggagtcaacttt 120  Q
    ||||||||||||||| |||||  | |||| ||||  ||||| ||||||  |||||||||  ||||||| |||| ||||||  ||||| || ||||||||     
T  24094211 atgaagattcgacaacgacggaagcaatgaaatccgatacggtacaactccaaccttcttgataatcttaaacagaccaagtaaacgtggtgtcaacttc 24094310  T
Q  121 cgacacttcaacgcacgt 138  Q
    | ||||||||| ||||||    
T  24094311 ctacacttcaaagcacgt 24094328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 25282180 - 25282285
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaa-gacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaa 100  Q
    |||| ||||||||||||||||||| |||||| ||| ||||| |  || ||||||  ||| |||||| |  |||| |||||||||| ||||||| | ||||    
T  25282180 gagatacatgaaacacatcatgaaaattcgaaaaacgacggcgaaaacgcaatctgatatgctacatctccaacattctcaataaactcaaacagcccaa 25282279  T
Q  101 caaaac 106  Q
    ||||||    
T  25282280 caaaac 25282285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 24818342 - 24818211
Alignment:
Q  7 acatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaac 106  Q
    |||||||| |||  |||||||||||||||  |||| || || ||||||  |||||||||  |  | || |||||||| |||||||| ||||||| ||||     
T  24818342 acatgaaatacactatgaagattcgacaacaacggcggcaacgcaatccgatacgctactgctcccactttctcaatgatctcaaatggaccaataaaat 24818243  T
Q  107 gaggagtcaactttcgacacttcaacgcacgt 138  Q
      || |||||||| | ||||||||| ||||||    
T  24818242 atggtgtcaacttcctacacttcaaagcacgt 24818211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 4e-42; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 24581110 - 24581244
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| ||||||    
T  24581110 agacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatctgatacgctacaaccccaaccttctcaatgacatcaaacggcccaaca 24581209  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||| | ||||||||| |||||    
T  24581210 aaacgaggagtcaacttcctacacttcaaagcacg 24581244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 11211164 - 11211029
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| ||||||  |||||| |||||| |||||||||||||||  |||||||| |||||    
T  11211164 gagacacatgaaacacattgtgaagattcgacaaagatggtggtaacgcaatccgatacgccacaaccccaaccttctcaataacatcaaacggtccaac 11211065  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  11211064 aaaacgaggagtcaacttcctacacttcaaagcacg 11211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 27010983 - 27011117
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  27010983 gagacacatgaaacacattatgaagatttgacaaagacggtggtaacgcaatctgatacgctacaaccccaaccttctcaatgacatcaaacgg-ccaac 27011081  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  27011082 aaaacgaggagtcaacttcctacacttcaaagcacg 27011117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 23503341 - 23503470
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||| ||||||||  ||||||||||||||  |||||||| |||||    
T  23503341 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacactacaaccctaaccttctcaataacatcaaacggtccaac 23503440  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||| ||||||| | |||||||||    
T  23503441 aaaacgaggattcaacttcctacacttcaa 23503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 21937658 - 21937523
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||| | |||||    
T  21937658 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacagcccaac 21937559  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  21937558 aaaacgaggagtcaacttcctacacttcaaagcacg 21937523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 24516526 - 24516595
Alignment:
Q  71 caaccttctcaataatctcaaacggaccaacaaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||||||||| |||||||||||| | ||||||| | || |||||||| ||| ||||||| ||||||||    
T  24516526 caaccttctcaacaatctcaaacggtcaaacaaaatgtggtgtcaacttccgatacttcaaagcacgtcc 24516595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 84; Significance: 3e-40; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 1201 - 1066
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  1201 gagatacatgaaacacattatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 1102  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  1101 aaaacgaggagtcaacttcctacacttcaaagcacg 1066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 84; Significance: 3e-40; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 1345 - 1210
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| |||| || |||||||||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  1345 gagatacattaatcacatcatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 1246  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| ||||||||||| |||||    
T  1245 aaaacgaggagtcaacttccgacacttcaaagcacg 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 84; Significance: 3e-40; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 46169 - 46304
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| || ||||||||||||| |  |||||||| |||||    
T  46169 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacagccccaaccttctcaatgacatcaaacggtccaac 46268  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  46269 aaaacgaggagtcaacttcctacacttcaaagcacg 46304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 84; Significance: 3e-40; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 98030 - 98165
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  98030 gagacacatgaaacacattatgaagattcaacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggcccaac 98129  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  98130 aaaacgaggagtcaacttcctacacttcaaagcacg 98165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 23757 - 23622
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| ||||||  ||||||||||| | |||||||||||||||  |||||||| ||||     
T  23757 gagacacatgaaacacattatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaatcccaaccttctcaataacatcaaacggtccaat 23658  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||| | ||||||||||| | ||||||||| |||||    
T  23657 aaaatggggagtcaacttcctacacttcaaagcacg 23622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 84; Significance: 3e-40; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23895 - 24030
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| | |||    
T  23895 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtctaac 23994  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||| |||||||||||| | ||||||||| |||||    
T  23995 aaaacaaggagtcaacttcctacacttcaaagcacg 24030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 231576 - 231711
Alignment:
Q  5 acacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||| | ||   |||||| | || ||||||| |||| ||||||||    
T  231576 acacatgaaacacatcatgaagattcgacaaagacggtggtaacgcattctgatacgctgccactctaacctttttaacaatctcatacggtccaacaaa 231675  T
Q  105 acgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    |||||| |||||||| ||||||||||| ||||||||    
T  231676 acgaggtgtcaacttccgacacttcaaagcacgtcc 231711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 83; Significance: 1e-39; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 10671 - 10809
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||  |||||||||||| |||||||||||| |||||    
T  10671 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaacacaatccgatacgctacaactccaaccttctcaacaatctcaaacggcccaac 10770  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||| ||||||||   |||||| || ||||||||    
T  10771 aaaacgaggtgtcaacttctaacacttgaaagcacgtcc 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 83; Significance: 1e-39; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 106864 - 106738
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||    
T  106864 gagacacatgaaacacattatgaagattcaacaaagacggtggtaacgcaatctgatacgctacaaccccaaccttctcaataacatcaaacggtccaac 106765  T
Q  102 aaaacgaggagtcaactttcgacactt 128  Q
    |||||||||||||||||| | ||||||    
T  106764 aaaacgaggagtcaacttcctacactt 106738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 80; Significance: 6e-38; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23409 - 23544
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||| |||||    
T  23409 gagacacatgaaacacattatgaagattcgacaaagaaggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacggtccaac 23508  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||| ||||||||| | ||||||||| |||||    
T  23509 aaaacgagcagtcaacttcctacacttcaaagcacg 23544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 78; Significance: 1e-36; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 5318 - 5189
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||||  |||| |||||||| |||||||||||||||  ||||| || |||||    
T  5318 gagaaacatgaaacacatcatgaagattctacaaagacggtggtaacgcaatccgatacactacaaccccaaccttctcaataacatcaaatggcccaac 5219  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||||||| | |||||||||    
T  5218 aaaacgaggagtcaacttcctacacttcaa 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 621 - 489
Alignment:
Q  5 acacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaa 104  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||| ||  |||||||| ||||||||    
T  621 acacatgaaatacatcatgaagattcgacaaagacggtggtaacgcaatccgatacgctacgaccccaaccttctcaacaacatcaaacggtccaacaaa 522  T
Q  105 acgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||| ||||||||||| | ||||||||| |||||    
T  521 acggggagtcaacttcctacacttcaaagcacg 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 677 - 542
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| |  |||||||  |||||    
T  677 gagacacatgaaatacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaatgacatcaaacgttccaac 578  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||| ||| |||||    
T  577 aaaacgaggagtcaacttcctacactccaaagcacg 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 40273 - 40408
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||   |||||||||||| ||||||||||||| |  |||||||| |||||    
T  40273 gagacacatgaaacacattatgaagattcgacaaagacggtggcaacgcaatccggtacgctacaaccccaaccttctcaatgacatcaaacggcccaac 40372  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | |||||| || |||||    
T  40373 aaaacgaggagtcaacttcctacactttaaagcacg 40408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 13266 - 13401
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||| ||||| |||||| ||  ||||||   |||||    
T  13266 gagatacatgaaacacatcatgaagattcgacaaagacggtggtaacacaatctgatacgctacaaccccaaccctctcaacaacatcaaacaacccaac 13365  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| |||||||| ||||||||    
T  13366 aaaacgaggagtcaacttccgacactttaacgcacg 13401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 6333 - 6460
Alignment:
Q  10 tgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgag 109  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||| ||||| |||||| ||  |||||||| ||||||||||| |    
T  6333 tgaaacacatcatgaagattcgacaaagacagtggtaacgcaatccgatacgctacaaccccaaccctctcaacaacatcaaacggcccaacaaaacgtg 6432  T
Q  110 gagtcaactttcgacacttcaacgcacg 137  Q
    |||| ||||| |||||||| ||||||||    
T  6433 gagttaacttccgacactttaacgcacg 6460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 122241 - 122106
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||||| |  | ||| || |||||    
T  122241 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatcctatacgctacatccccaaccttctcaattacattaaatggtccaac 122142  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||| ||||||||||||| | ||||||||| |||||    
T  122141 aaaatgaggagtcaacttcctacacttcaaagcacg 122106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 78920 - 78785
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||| ||||||  ||||||||||||| |||||||||| ||||  |||||| | |||||    
T  78920 gagacacatgaaacacattatgaagatttgacatagacggtggtaacgcaatccgatacgctacaaccccaaccttctctataacatcaaaccgtccaac 78821  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  78820 aaaacgaggagtcaacttcctacacttcaaagcacg 78785  T

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Target: scaffold0387 (Bit Score: 75; Significance: 6e-35; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 14146 - 14280
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| |||| |  ||||||||||||| |||||||||| || |  |||||||| ||||||    
T  14146 agacacatgaaacacatcatgaagatttgccaaagactgtggtaacgcaacccgatacgctacaaccccaaccttctcgatgacatcaaacggcccaaca 14245  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||| ||||||||||| |||||    
T  14246 aaacgaggagtcaacttccgacacttcaaagcacg 14280  T

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Target: scaffold0447 (Bit Score: 74; Significance: 2e-34; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 5766 - 5891
Alignment:
Q  12 aaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgagga 111  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||||||| ||||    
T  5766 aaacacatcatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaacaaaacaagga 5865  T
Q  112 gtcaactttcgacacttcaacgcacg 137  Q
    ||| |||| | ||||||||| |||||    
T  5866 gtcgacttcctacacttcaaagcacg 5891  T

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Target: scaffold0447; HSP #2
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 10380 - 10505
Alignment:
Q  12 aaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgagga 111  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||||||| ||||    
T  10380 aaacacatcatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaacaaaacaagga 10479  T
Q  112 gtcaactttcgacacttcaacgcacg 137  Q
    ||| |||| | ||||||||| |||||    
T  10480 gtcgacttcctacacttcaaagcacg 10505  T

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Target: scaffold0383 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 8375 - 8500
Alignment:
Q  12 aaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgagga 111  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||| |||||||||| ||||    
T  8375 aaacacatcatgaagattcgacaaagatggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacggtccaacaaaacaagga 8474  T
Q  112 gtcaactttcgacacttcaacgcacg 137  Q
    ||| |||| | ||||||||| |||||    
T  8475 gtcgacttcctacacttcaaagcacg 8500  T

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Target: scaffold0117 (Bit Score: 74; Significance: 2e-34; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 10600 - 10471
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| |||||   ||||||||||||| |||| ||||||||||  ||||| || |||||    
T  10600 gagacacatgaaacacatcatgaatattcgacaaagatggtggtaacgcaattcgatacgctacaaccccaactttctcaataacatcaaatggcccaac 10501  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||||||||||||||| | |||||||||    
T  10500 aaaacgaggagtcaacttcctacacttcaa 10471  T

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Target: scaffold0589 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 9003 - 9137
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||| |||||||||| |  |  |||||||| ||||||    
T  9003 agacacgtgaaacacatcatgaagattcaacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctctacgacatcaaacggtccaaca 9102  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||| || | ||||||||| |||||    
T  9103 aaacgaggagtcaaattccaacacttcaaagcacg 9137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 67; Significance: 4e-30; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 15014 - 14893
Alignment:
Q  15 cacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaacaaaacgaggagtc 114  Q
    ||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||| | ||||| ||||||||||||    
T  15014 cacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaataacatcaaacagtccaac-aaacgaggagtc 14916  T
Q  115 aactttcgacacttcaacgcacg 137  Q
    ||||| | ||||||||| |||||    
T  14915 aacttcctacacttcaaagcacg 14893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 5451 - 5370
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaat 83  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  5451 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaaccccaaccttctcaat 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 65; Significance: 6e-29; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 22716 - 22843
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||||       |||||||| ||||||||||||| |  |||||||| |||||    
T  22716 gagacacatgaaacacattatgaagattcgacagagatggtggtaatgcaatc-------ctacaaccccaaccttctcaatgacatcaaacggtccaac 22808  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcac 136  Q
    |||||||||||||||||| | ||||||||| ||||    
T  22809 aaaacgaggagtcaacttcctacacttcaaagcac 22843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 4235 - 4100
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| |||||||||| ||||||||||||| || ||||||  | || ||||||||  ||||||||||||||  ||||| || |||||    
T  4235 gagacacatgaaacacattatgaagattctacaaagacggtggcaacgcaatccgacactctacaaccctaaccttctcaataacatcaaatggtccaac 4136  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||| || | ||||||||| |||||    
T  4135 aaaacgaggagtcaaattcctacacttcaaagcacg 4100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 12923 - 13058
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | ||||  ||||||||||||   |||| ||||||| |  | ||| |||||||     
T  12923 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgaaatccgatacgctacaacacaaaccatctcaatgacataaaaaggaccaaa 13022  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  13023 aaaacgaggagtcaacttcctacacttcaaagcacg 13058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 8101 - 7966
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacgg-accaac 101  Q
    |||| |||||||||||| |||||||||||||||||||||||| || |||||    |||||||||||| ||||||| ||||| |  |||||||| ||||||    
T  8101 agacccatgaaacacattatgaagattcgacaaagacggtggcaacgcaattcggtacgctacaaccccaaccttttcaatcacatcaaacggtaccaac 8002  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    |||||||||||||||||| | ||||||||| |||||    
T  8001 aaaacgaggagtcaacttcctacacttcaaagcacg 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 63; Significance: 9e-28; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 16460 - 16327
Alignment:
Q  3 agacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaaca 102  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||  || ||  ||||||||||||| | ||||| |||||||  |||||||| |||| |    
T  16460 agacacacgaaacacatcatgaagattcaacaaagacggtggtaacacactccgatacgctacaacc-ccaccttttcaataacatcaaacggtccaata 16362  T
Q  103 aaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||| | ||||||||| |||||    
T  16361 aaacgaggagtcaacttcctacacttcaaagcacg 16327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 33285 - 33151
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| ||||||  ||| ||||||||| ||||||||||| | |  ||||||   |||||    
T  33285 gagacacatgatacacattatgaagattcgacaaagacggtggtaacgcaatctgata-gctacaaccccaaccttctcagttacatcaaacaatccaac 33187  T
Q  102 aaaacgaggagtcaactttcgacacttcaacgcacg 137  Q
    ||||||||||||||||||   ||||||||| |||||    
T  33186 aaaacgaggagtcaacttcttacacttcaaagcacg 33151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 9e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 370430 - 370302
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacctcaaccttctcaataatctcaaacggaccaac 101  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||  |||||  ||||||||||||  ||||||| |||| ||||||||| || |||||    
T  370430 gagacaaatgaaacacatcatgaagattcgacaatgacgg-ggtaacacaatccaatacgctacaactccaaccttatcaacaatctcaaatggtccaac 370332  T
Q  102 aaaacgaggagtcaactttcgacacttcaa 131  Q
    |||||| || |||||||| | |||||||||    
T  370331 aaaacgcggtgtcaacttccaacacttcaa 370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 52; Significance: 3e-21; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 1201 - 1268
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaatcatatacgctacaacc 69  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  1201 gagacacatgaaacacattatgaagattcgacaaagacggtggtaacgcaatccgatacgctacaacc 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 78364 - 78415
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaat 53  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  78364 gagacacatgaaacacatcatgaagattcgacaacgacggcggtaacgcaat 78415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 73998 - 74053
Alignment:
Q  85 atctcaaacggaccaacaaaacgaggagtcaactttcgacacttcaacgcacgtcc 140  Q
    ||||||||||| ||||||||||| || |||||||| | ||||||||| ||||||||    
T  73998 atctcaaacggtccaacaaaacgtggtgtcaacttccaacacttcaaagcacgtcc 74053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 1058 - 1007
Alignment:
Q  2 gagacacatgaaacacatcatgaagattcgacaaagacggtggtaatgcaat 53  Q
    |||||||||||||||||| ||| || |||||||| | ||||||||| |||||    
T  1058 gagacacatgaaacacattatgcaggttcgacaacgtcggtggtaacgcaat 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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