View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5848-22 (Length: 132)
Name: Solexa-NF5848-22
Description: NF5848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5848-22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 5e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 5e-63
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 46161297 - 46161426
Alignment:
| Q |
3 |
agaggaagaagctctaagtgtagaatggtctaatgagaaaggaaaccatggtaaaacctaattatgttagtgtgtagaatggtctaatgagaaaagattt |
102 |
Q |
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| T |
46161297 |
agaggaagaagctctaagtgtagaatggtctaatgagaaaggaaaccatggtaaaacctaattatgttagtgtgtagaatggtctaatgagaaaagattt |
46161396 |
T |
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| Q |
103 |
gattcagtatttttattgatattctgctga |
132 |
Q |
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| T |
46161397 |
gattcagtatttttattgacattttgctga |
46161426 |
T |
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