View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5850-10 (Length: 61)
Name: Solexa-NF5850-10
Description: NF5850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5850-10 |
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Alignment Details
Target: chr4 (Bit Score: 40; Significance: 0.00000000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 45545055 - 45545016
Alignment:
| Q |
7 |
acagaaaactactcactttgcatgttgctcgtgcaagatc |
46 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
45545055 |
acagaaaactactcactttgcatgttgctcgtgcaagatc |
45545016 |
T |
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