View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5851-8 (Length: 114)
Name: Solexa-NF5851-8
Description: NF5851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5851-8 |
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| [»] scaffold0003 (1 HSPs) |
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Alignment Details
Target: scaffold0003 (Bit Score: 102; Significance: 4e-51; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 348585 - 348686
Alignment:
| Q |
13 |
gacgaagaaaaggtttaagattagagtaacgctgataccaatcaaaagaaccaccctcttgaatgtaacgagcgtcccagtaatgagcatcaccgtaatc |
112 |
Q |
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| T |
348585 |
gacgaagaaaaggtttaagattagagtaacgctgataccaatcaaaagaaccaccctcttgaatgtaacgagcgtcccagtaatgagcatcaccgtaatc |
348684 |
T |
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| Q |
113 |
at |
114 |
Q |
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|| |
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| T |
348685 |
at |
348686 |
T |
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