View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5852-15 (Length: 137)
Name: Solexa-NF5852-15
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5852-15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 106; Significance: 2e-53; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 43111374 - 43111244
Alignment:
| Q |
7 |
aggtggaatattcctctagacaatggaagtggatttcatatatggccaactactctaaataaattcccctcgaatattcnnnnnnnacacaatctttgcc |
106 |
Q |
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| T |
43111374 |
aggtggaatattcctctagacaacggaagtggatttcatatatggccaactactctaaataaattcccctcgaatattctttttttacacaatctttgcc |
43111275 |
T |
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| Q |
107 |
ctctattacttgaccaaactaaagttcataa |
137 |
Q |
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| T |
43111274 |
ctctattacttgaccaaactaaagttcataa |
43111244 |
T |
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