View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5852-22 (Length: 132)
Name: Solexa-NF5852-22
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5852-22 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 9e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 46140327 - 46140455
Alignment:
| Q |
4 |
gacaaaaataccatgtctacccccactataaaactgtccaaccacattgacacttttaccctcaagcaacttcaccaattccctctgacgatccacaagt |
103 |
Q |
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| T |
46140327 |
gacaaaaataccatgtctaccaccactataaaactgtccaaccacattgacacttttaccctcaagcaacttcaccaattccctctgacgatccacaagt |
46140426 |
T |
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| Q |
104 |
tgatccccatcacaaccaaaaaccgctac |
132 |
Q |
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| T |
46140427 |
tgatccccatcacaaccaaaaaccgctac |
46140455 |
T |
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