View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5852-30 (Length: 122)
Name: Solexa-NF5852-30
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5852-30 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 90; Significance: 6e-44; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 50337236 - 50337115
Alignment:
| Q |
1 |
aaaaaatagaggtagagtagtaccttagaaatggcgtggcggaaatcatcatggttaatgggtcgttgagaaatgtcccaatcaacagaaggtaatatag |
100 |
Q |
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| T |
50337236 |
aaaaaatagaggtagagtggtaccttagaaatggcgtggcgtaaatcatcatggttaatgggtcgttgagaaatgacccaatcaccagaagggaatctag |
50337137 |
T |
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| Q |
101 |
caagagactttctacataaatc |
122 |
Q |
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|||||| |||||||| |||||| |
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| T |
50337136 |
caagaggctttctacctaaatc |
50337115 |
T |
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