View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5852-35 (Length: 116)
Name: Solexa-NF5852-35
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5852-35 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 109; Significance: 3e-55; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 12551022 - 12551130
Alignment:
| Q |
8 |
gattggtctttgggtcaagtgtgctttaaaagagggttgtgacttgtgagttcgcaagagattggaccttagactagtctaaaaccattatataatatag |
107 |
Q |
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| T |
12551022 |
gattggtctttgggtcaagtgtgctttaaaagagggttgtgacttgtgagttcgcaagagattggaccttagactagtctaaaaccattatataatatag |
12551121 |
T |
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| Q |
108 |
ttgatgatc |
116 |
Q |
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||||||||| |
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| T |
12551122 |
ttgatgatc |
12551130 |
T |
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