View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5852-4 (Length: 170)
Name: Solexa-NF5852-4
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5852-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 6e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 6e-85
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 17869991 - 17870153
Alignment:
| Q |
8 |
atttggttgtttatgcatgtttagtttgaagactcaccaaagagtaataagcaccaaaaggtcctttatccaataatgctttgtgagttccaatttcaac |
107 |
Q |
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| T |
17869991 |
atttggttgtttatgcatgtttagtttgaagactcaccaaagagtaataagcaccaaaaggtcctttatccaataatgctttgtgagttccaatttcaac |
17870090 |
T |
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| Q |
108 |
cattttccctttttctaaaacagcaataacatcacaattgtgtatggtactcaacctacgtgc |
170 |
Q |
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| T |
17870091 |
cattttccctttttctaaaacagcaataacatcacaattgtgtatggtactcaacctatgtgc |
17870153 |
T |
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