View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5853-13 (Length: 144)
Name: Solexa-NF5853-13
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5853-13 |
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Alignment Details
Target: chr4 (Bit Score: 126; Significance: 2e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 2408034 - 2408163
Alignment:
| Q |
4 |
cagagacgacgttcacatggcaaagaaataaatgagaaaaggaccacataccatgttttgagagaatcttctagttcttacgtcgtacacgcttggtaca |
103 |
Q |
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| T |
2408034 |
cagagacgacgttcacatggcaaagaaataaatgagaaaaggaccacataccatgttttgagagaatcttctagttcttacgtcgtacacgcttggtaca |
2408133 |
T |
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| Q |
104 |
tcctctaactatttggactttttcatgacc |
133 |
Q |
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|||| ||||||||||||||||||||||||| |
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| T |
2408134 |
tcctttaactatttggactttttcatgacc |
2408163 |
T |
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