View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5853-15 (Length: 143)

Name: Solexa-NF5853-15
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5853-15
Solexa-NF5853-15
[»] chr4 (41 HSPs)
chr4 (4-143)||(8395128-8395267)
chr4 (7-143)||(7124429-7124565)
chr4 (12-143)||(5137820-5137951)
chr4 (12-142)||(18856234-18856364)
chr4 (12-143)||(9228631-9228762)
chr4 (67-143)||(8392982-8393058)
chr4 (12-124)||(16628291-16628403)
chr4 (12-126)||(5143807-5143921)
chr4 (67-142)||(18860446-18860521)
chr4 (65-143)||(56141509-56141587)
chr4 (12-123)||(3778116-3778226)
chr4 (67-143)||(3814529-3814605)
chr4 (67-143)||(5135649-5135725)
chr4 (75-143)||(7122275-7122343)
chr4 (67-143)||(9223899-9223975)
chr4 (67-143)||(24742501-24742577)
chr4 (75-143)||(31495825-31495893)
chr4 (67-143)||(51520974-51521050)
chr4 (12-124)||(6742835-6742946)
chr4 (67-142)||(45347317-45347392)
chr4 (67-143)||(5733171-5733247)
chr4 (79-143)||(13992802-13992866)
chr4 (79-143)||(28467990-28468054)
chr4 (79-143)||(31985140-31985204)
chr4 (72-127)||(8689042-8689097)
chr4 (79-124)||(29761182-29761227)
chr4 (72-143)||(5148225-5148296)
chr4 (74-124)||(38151918-38151968)
chr4 (73-125)||(5268698-5268750)
chr4 (12-91)||(34570971-34571048)
chr4 (12-74)||(3792432-3792493)
chr4 (74-124)||(10047932-10047982)
chr4 (74-124)||(16622774-16622824)
chr4 (107-143)||(18712295-18712331)
chr4 (73-124)||(54867745-54867796)
chr4 (79-124)||(36314716-36314761)
chr4 (79-124)||(36328925-36328970)
chr4 (17-65)||(4569674-4569721)
chr4 (74-124)||(9194164-9194215)
chr4 (14-65)||(12740129-12740179)
chr4 (14-65)||(12748335-12748385)
[»] chr7 (44 HSPs)
chr7 (4-143)||(6592845-6592984)
chr7 (12-143)||(12397416-12397547)
chr7 (4-123)||(18390506-18390625)
chr7 (12-143)||(21640347-21640478)
chr7 (12-143)||(18409322-18409454)
chr7 (12-141)||(16880586-16880715)
chr7 (12-141)||(24265622-24265751)
chr7 (67-143)||(1562511-1562587)
chr7 (67-143)||(32060812-32060888)
chr7 (12-143)||(21983790-21983921)
chr7 (67-143)||(6595061-6595137)
chr7 (67-143)||(2058528-2058604)
chr7 (67-143)||(4873645-4873721)
chr7 (67-143)||(12406781-12406857)
chr7 (67-143)||(20343500-20343576)
chr7 (67-143)||(20357028-20357104)
chr7 (75-143)||(24789435-24789503)
chr7 (63-143)||(31109066-31109146)
chr7 (67-142)||(18392705-18392780)
chr7 (79-143)||(43504644-43504708)
chr7 (79-143)||(39730946-39731010)
chr7 (79-140)||(1532897-1532958)
chr7 (66-143)||(24023818-24023895)
chr7 (67-143)||(47264190-47264267)
chr7 (12-88)||(9189445-9189520)
chr7 (79-143)||(48408411-48408475)
chr7 (12-71)||(20000330-20000389)
chr7 (67-143)||(2479883-2479960)
chr7 (67-143)||(44847619-44847696)
chr7 (79-143)||(18414198-18414262)
chr7 (79-143)||(21646566-21646630)
chr7 (66-141)||(21811738-21811813)
chr7 (13-84)||(47674516-47674586)
chr7 (64-141)||(16885441-16885518)
chr7 (67-143)||(21989454-21989531)
chr7 (12-65)||(48491125-48491177)
chr7 (74-124)||(79955-80005)
chr7 (67-141)||(24260821-24260895)
chr7 (109-143)||(4509335-4509369)
chr7 (109-143)||(4511177-4511211)
chr7 (109-143)||(6431467-6431501)
chr7 (80-125)||(49092237-49092282)
chr7 (12-40)||(38281765-38281793)
chr7 (73-124)||(46515808-46515860)
[»] chr5 (53 HSPs)
chr5 (4-142)||(40381826-40381964)
chr5 (7-142)||(16546156-16546291)
chr5 (12-143)||(29722097-29722229)
chr5 (12-143)||(27445490-27445621)
chr5 (12-143)||(16409022-16409154)
chr5 (12-124)||(43592797-43592909)
chr5 (12-141)||(28807021-28807150)
chr5 (12-141)||(37560892-37561021)
chr5 (33-143)||(26177432-26177543)
chr5 (12-110)||(43625605-43625703)
chr5 (13-141)||(33768697-33768826)
chr5 (67-142)||(10592844-10592919)
chr5 (12-141)||(31401291-31401421)
chr5 (67-143)||(22536776-22536852)
chr5 (67-142)||(40379678-40379753)
chr5 (66-143)||(1456637-1456714)
chr5 (75-143)||(9789732-9789800)
chr5 (66-142)||(16543993-16544069)
chr5 (75-143)||(18442156-18442224)
chr5 (66-142)||(25077705-25077781)
chr5 (66-142)||(25135674-25135750)
chr5 (67-143)||(27450333-27450409)
chr5 (75-143)||(29719974-29720042)
chr5 (75-143)||(29752313-29752381)
chr5 (67-143)||(30631872-30631948)
chr5 (67-143)||(29402550-29402626)
chr5 (67-143)||(43599242-43599318)
chr5 (67-143)||(43604734-43604810)
chr5 (67-143)||(43610226-43610302)
chr5 (67-143)||(15045203-15045279)
chr5 (79-143)||(15465048-15465112)
chr5 (79-143)||(26170370-26170434)
chr5 (79-143)||(16407654-16407718)
chr5 (75-143)||(29751647-29751715)
chr5 (66-124)||(31180773-31180831)
chr5 (67-141)||(37556125-37556199)
chr5 (79-143)||(36931856-36931920)
chr5 (80-143)||(24136407-24136470)
chr5 (79-143)||(9352820-9352884)
chr5 (72-124)||(14520796-14520848)
chr5 (44-88)||(28832772-28832816)
chr5 (12-65)||(13487744-13487796)
chr5 (62-141)||(33791829-33791909)
chr5 (14-89)||(25785266-25785340)
chr5 (12-87)||(42426805-42426879)
chr5 (21-124)||(535457-535558)
chr5 (72-141)||(2785888-2785957)
chr5 (72-141)||(31396495-31396564)
chr5 (79-116)||(35388196-35388233)
chr5 (14-86)||(25767275-25767346)
chr5 (74-124)||(12083658-12083708)
chr5 (79-124)||(11916457-11916502)
chr5 (67-125)||(31004645-31004704)
[»] chr6 (49 HSPs)
chr6 (12-143)||(16554399-16554530)
chr6 (12-143)||(16630955-16631086)
chr6 (12-143)||(34166611-34166742)
chr6 (12-143)||(11857491-11857622)
chr6 (12-143)||(14741871-14742002)
chr6 (12-124)||(16652661-16652773)
chr6 (67-143)||(16579025-16579101)
chr6 (67-143)||(16616279-16616355)
chr6 (12-141)||(33335374-33335504)
chr6 (66-143)||(22010188-22010265)
chr6 (67-143)||(6136471-6136547)
chr6 (67-143)||(25420797-25420873)
chr6 (75-143)||(27647476-27647544)
chr6 (67-143)||(30125018-30125094)
chr6 (75-143)||(3073266-3073334)
chr6 (75-143)||(13150857-13150925)
chr6 (67-142)||(6439008-6439083)
chr6 (75-143)||(6097909-6097977)
chr6 (67-143)||(33342612-33342688)
chr6 (12-87)||(16568578-16568652)
chr6 (65-143)||(6026832-6026910)
chr6 (75-143)||(411694-411762)
chr6 (75-143)||(26253598-26253666)
chr6 (75-143)||(34151836-34151904)
chr6 (75-143)||(34164452-34164520)
chr6 (66-143)||(23896880-23896958)
chr6 (67-124)||(5266596-5266653)
chr6 (67-124)||(14737085-14737142)
chr6 (79-143)||(5674242-5674306)
chr6 (79-143)||(22709568-22709632)
chr6 (80-143)||(2172027-2172090)
chr6 (67-122)||(28155090-28155145)
chr6 (67-141)||(5343990-5344064)
chr6 (73-124)||(5016975-5017026)
chr6 (73-124)||(31085952-31086003)
chr6 (12-65)||(5406750-5406802)
chr6 (12-65)||(5407518-5407570)
chr6 (12-65)||(5411075-5411127)
chr6 (12-65)||(5411843-5411895)
chr6 (67-124)||(5571749-5571806)
chr6 (72-141)||(16839256-16839325)
chr6 (72-141)||(33329938-33330007)
chr6 (12-72)||(17759262-17759321)
chr6 (64-124)||(24714938-24715000)
chr6 (72-141)||(6005932-6006001)
chr6 (74-119)||(21272469-21272514)
chr6 (12-65)||(24435393-24435445)
chr6 (12-64)||(28038258-28038309)
chr6 (73-124)||(18234650-18234701)
[»] chr3 (71 HSPs)
chr3 (4-143)||(4599031-4599170)
chr3 (4-143)||(10210915-10211054)
chr3 (12-143)||(10057972-10058103)
chr3 (12-143)||(10060194-10060325)
chr3 (12-143)||(10062416-10062547)
chr3 (12-143)||(10064638-10064769)
chr3 (12-143)||(10066860-10066991)
chr3 (12-124)||(6718233-6718345)
chr3 (12-143)||(28503264-28503395)
chr3 (12-143)||(22172607-22172738)
chr3 (12-143)||(1306527-1306659)
chr3 (12-143)||(23198453-23198585)
chr3 (12-141)||(2676519-2676649)
chr3 (12-141)||(32475997-32476127)
chr3 (18-143)||(37407988-37408113)
chr3 (66-143)||(3617033-3617110)
chr3 (12-141)||(8512753-8512882)
chr3 (67-143)||(6716085-6716161)
chr3 (61-143)||(54634704-54634786)
chr3 (12-88)||(3327787-3327863)
chr3 (67-143)||(4601252-4601328)
chr3 (75-143)||(10055813-10055881)
chr3 (67-143)||(10208778-10208854)
chr3 (67-143)||(25637013-25637089)
chr3 (67-143)||(40372256-40372332)
chr3 (75-143)||(800694-800762)
chr3 (67-143)||(8477926-8478002)
chr3 (67-143)||(28501152-28501228)
chr3 (12-88)||(37466876-37466951)
chr3 (33-125)||(36029658-36029750)
chr3 (67-124)||(45282585-45282642)
chr3 (67-143)||(7167806-7167882)
chr3 (79-143)||(7782635-7782699)
chr3 (67-143)||(18656953-18657029)
chr3 (79-143)||(23200652-23200716)
chr3 (79-143)||(26928093-26928157)
chr3 (12-124)||(40734953-40735063)
chr3 (12-87)||(6794165-6794240)
chr3 (79-143)||(37726222-37726286)
chr3 (83-143)||(27352097-27352157)
chr3 (79-143)||(33386150-33386214)
chr3 (79-141)||(2672431-2672493)
chr3 (67-124)||(8738542-8738599)
chr3 (67-124)||(9090780-9090837)
chr3 (72-124)||(21711768-21711820)
chr3 (79-143)||(27453504-27453568)
chr3 (67-126)||(27974433-27974493)
chr3 (12-84)||(29812587-29812658)
chr3 (76-124)||(40734084-40734132)
chr3 (12-71)||(4386447-4386505)
chr3 (79-126)||(32143868-32143915)
chr3 (74-124)||(16264896-16264946)
chr3 (74-124)||(30709266-30709316)
chr3 (63-124)||(39032013-39032075)
chr3 (79-124)||(27027273-27027318)
chr3 (12-71)||(7763977-7764034)
chr3 (80-126)||(27985971-27986017)
chr3 (12-65)||(5258717-5258769)
chr3 (12-65)||(44331094-44331146)
chr3 (73-117)||(1730915-1730959)
chr3 (72-124)||(27038608-27038660)
chr3 (74-141)||(32480855-32480922)
chr3 (73-124)||(40592251-40592302)
chr3 (66-124)||(16498636-16498694)
chr3 (67-141)||(24968630-24968704)
chr3 (74-124)||(35926057-35926106)
chr3 (75-125)||(40845220-40845270)
chr3 (12-124)||(43402543-43402652)
chr3 (74-124)||(48438782-48438832)
chr3 (12-65)||(9634892-9634944)
chr3 (74-124)||(24694655-24694706)
[»] chr8 (38 HSPs)
chr8 (12-143)||(33037232-33037363)
chr8 (12-143)||(18869969-18870097)
chr8 (12-124)||(10688563-10688675)
chr8 (67-142)||(39784325-39784400)
chr8 (66-143)||(42575833-42575910)
chr8 (67-143)||(10683739-10683815)
chr8 (67-143)||(30656206-30656282)
chr8 (67-143)||(36979938-36980014)
chr8 (64-143)||(3439085-3439164)
chr8 (79-143)||(2627331-2627395)
chr8 (67-143)||(4759534-4759610)
chr8 (67-143)||(7289427-7289503)
chr8 (67-143)||(15290143-15290219)
chr8 (67-143)||(15470512-15470588)
chr8 (67-143)||(18852627-18852703)
chr8 (74-143)||(6311859-6311928)
chr8 (67-142)||(7412876-7412952)
chr8 (67-143)||(25327664-25327740)
chr8 (67-124)||(25689561-25689618)
chr8 (12-88)||(19751834-19751909)
chr8 (79-143)||(26288440-26288504)
chr8 (79-143)||(26301697-26301761)
chr8 (79-143)||(26313691-26313755)
chr8 (79-143)||(31042921-31042985)
chr8 (13-65)||(35741124-35741176)
chr8 (80-143)||(1261428-1261491)
chr8 (73-124)||(5701958-5702009)
chr8 (12-74)||(26268777-26268838)
chr8 (79-124)||(4456575-4456620)
chr8 (17-74)||(15949126-15949182)
chr8 (12-65)||(34254900-34254952)
chr8 (72-141)||(35745904-35745973)
chr8 (12-71)||(10014685-10014743)
chr8 (12-74)||(19492248-19492308)
chr8 (12-70)||(26402624-26402681)
chr8 (12-65)||(41365408-41365460)
chr8 (80-124)||(23799105-23799149)
chr8 (12-72)||(40220203-40220262)
[»] chr1 (33 HSPs)
chr1 (12-143)||(41391109-41391240)
chr1 (12-143)||(25444537-25444668)
chr1 (33-142)||(44023343-44023452)
chr1 (12-143)||(19360857-19360989)
chr1 (66-143)||(9036002-9036079)
chr1 (67-142)||(44203218-44203293)
chr1 (67-143)||(21053540-21053616)
chr1 (67-143)||(39446006-39446082)
chr1 (75-143)||(20622744-20622812)
chr1 (12-124)||(13598967-13599078)
chr1 (66-142)||(1054513-1054589)
chr1 (75-143)||(40281967-40282035)
chr1 (12-88)||(47102279-47102354)
chr1 (63-143)||(13604091-13604172)
chr1 (75-143)||(9986794-9986862)
chr1 (79-143)||(24202264-24202328)
chr1 (79-143)||(19365781-19365845)
chr1 (67-143)||(25439399-25439475)
chr1 (67-124)||(24793666-24793723)
chr1 (83-143)||(51765007-51765067)
chr1 (24-87)||(28220796-28220859)
chr1 (62-124)||(41398764-41398826)
chr1 (79-124)||(21536125-21536170)
chr1 (80-124)||(37070334-37070378)
chr1 (12-75)||(776793-776855)
chr1 (72-143)||(26644379-26644450)
chr1 (12-75)||(50167729-50167791)
chr1 (12-71)||(47703333-47703391)
chr1 (67-124)||(3282273-3282331)
chr1 (66-124)||(13659840-13659898)
chr1 (12-74)||(41360473-41360533)
chr1 (83-124)||(16124197-16124238)
chr1 (12-64)||(155375-155426)
[»] scaffold0491 (2 HSPs)
scaffold0491 (12-143)||(9231-9363)
scaffold0491 (79-143)||(11676-11740)
[»] scaffold0674 (1 HSPs)
scaffold0674 (39-143)||(4234-4338)
[»] scaffold0259 (1 HSPs)
scaffold0259 (12-141)||(1684-1813)
[»] scaffold0197 (2 HSPs)
scaffold0197 (12-141)||(13729-13858)
scaffold0197 (12-141)||(18608-18738)
[»] chr2 (27 HSPs)
chr2 (13-141)||(19344935-19345064)
chr2 (67-143)||(12647891-12647967)
chr2 (66-143)||(44310470-44310547)
chr2 (67-143)||(9295862-9295938)
chr2 (67-143)||(32247276-32247352)
chr2 (67-143)||(39811477-39811553)
chr2 (67-141)||(14292051-14292125)
chr2 (67-143)||(11098387-11098463)
chr2 (12-124)||(39483443-39483554)
chr2 (79-143)||(4484846-4484910)
chr2 (79-143)||(25410189-25410253)
chr2 (79-143)||(32289161-32289225)
chr2 (12-87)||(14634383-14634457)
chr2 (75-143)||(6266283-6266351)
chr2 (79-143)||(40739380-40739444)
chr2 (79-143)||(3492300-3492364)
chr2 (79-143)||(30832934-30832998)
chr2 (74-124)||(8389631-8389681)
chr2 (72-126)||(36757423-36757477)
chr2 (67-126)||(28258669-28258729)
chr2 (73-124)||(33528104-33528155)
chr2 (74-124)||(10706733-10706783)
chr2 (74-124)||(21630511-21630561)
chr2 (12-74)||(31056685-31056746)
chr2 (73-118)||(20522794-20522839)
chr2 (74-124)||(23077952-23078002)
chr2 (12-65)||(13828839-13828891)
[»] scaffold0565 (1 HSPs)
scaffold0565 (67-143)||(3109-3185)
[»] scaffold1455 (1 HSPs)
scaffold1455 (67-142)||(1709-1784)
[»] scaffold0137 (1 HSPs)
scaffold0137 (66-142)||(5858-5934)
[»] scaffold0464 (1 HSPs)
scaffold0464 (67-142)||(870-945)
[»] scaffold0006 (4 HSPs)
scaffold0006 (12-124)||(6252-6363)
scaffold0006 (63-143)||(132748-132829)
scaffold0006 (73-124)||(3060-3111)
scaffold0006 (66-124)||(149601-149659)
[»] scaffold0135 (1 HSPs)
scaffold0135 (67-143)||(34554-34630)
[»] scaffold0355 (1 HSPs)
scaffold0355 (67-143)||(3337-3413)
[»] scaffold0188 (1 HSPs)
scaffold0188 (79-143)||(17444-17508)
[»] scaffold0140 (1 HSPs)
scaffold0140 (79-143)||(7924-7988)
[»] scaffold0510 (1 HSPs)
scaffold0510 (66-143)||(1082-1160)
[»] scaffold0665 (1 HSPs)
scaffold0665 (67-124)||(8216-8273)
[»] scaffold0286 (1 HSPs)
scaffold0286 (80-143)||(21953-22016)
[»] scaffold0087 (2 HSPs)
scaffold0087 (79-143)||(43447-43511)
scaffold0087 (72-126)||(36330-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (79-126)||(45744-45791)
[»] scaffold0078 (1 HSPs)
scaffold0078 (12-87)||(32754-32828)
[»] scaffold0028 (1 HSPs)
scaffold0028 (66-141)||(148443-148518)
[»] scaffold0036 (1 HSPs)
scaffold0036 (53-124)||(86153-86225)
[»] scaffold1908 (1 HSPs)
scaffold1908 (12-40)||(1083-1111)
[»] scaffold1519 (1 HSPs)
scaffold1519 (107-143)||(523-559)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-141)||(176457-176524)


Alignment Details
Target: chr4 (Bit Score: 136; Significance: 3e-71; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 8395128 - 8395267
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8395128 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaac 8395227  T
Q  104 agggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8395228 agggaaatcgtgacacgattttggtatcgtgacacgattt 8395267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 7124429 - 7124565
Alignment:
Q  7 aaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  7124429 aaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtgtggaagaacagg 7124528  T
Q  107 gaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7124529 gaaatcgtgacacgattttgggatcgtgacacgattt 7124565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 5137820 - 5137951
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  5137820 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggcttggaagaacagggaaat 5137919  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  5137920 cgtgacacgattttggtatcgtgacgcgattt 5137951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 18856364 - 18856234
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18856364 ggtggttgatggttaaattggcatcaccaccaaattagaagtcaaggtggagaaatgttgaaattggcttcaaatttgtggtctggaagaacagagaaat 18856265  T
Q  112 cgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||||||||||| ||||||||||||||    
T  18856264 cgtgacacgattttggaatcgtgacacgatt 18856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 9228631 - 9228762
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  9228631 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 9228730  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  9228731 cgtgacacgattttggcatcgtgacacgattt 9228762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 8392982 - 8393058
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 8393058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 16628291 - 16628403
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaa-attgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||||||||||||| |||||||||| ||||| | |||| ||||||||||||||| ||||||||||| ||||    
T  16628291 ggtggttgatggttaaattgacatcaccaccaaattagaagtcgaggtggagaa-tgttgtatattggcttcaaatttgtggtttggaagaacagagaaa 16628389  T
Q  111 tcgtgacacgattt 124  Q
    ||||||||||||||    
T  16628390 tcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 5143921 - 5143807
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa-ttgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    |||||||||||| |||| |  ||||| |||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  5143921 ggtggttgatgggtaaactaacatcaccaccaa-ttagtagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttggaagaacagagaaa 5143823  T
Q  111 tcgtgacacgattttg 126  Q
    ||||||||||||||||    
T  5143822 tcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18860521 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 56141509 - 56141587
Alignment:
Q  65 aatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  56141509 aatgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 56141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 3778226 - 3778116
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaa-attgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||| |||||||||||||||||||| ||||| | |||| ||||||||||||||| ||||||||||| ||||    
T  3778226 ggtggttgatggttaaattgacatcaccaccaa-ttagaagtcaaggtggagaa-tgttgtatattggcttcaaatttgtggtttggaagaacagagaaa 3778129  T
Q  111 tcgtgacacgatt 123  Q
    |||||||||||||    
T  3778128 tcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 3814605 - 3814529
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3814605 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 3814529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 5135649 - 5135725
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5135649 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 5135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 7122275 - 7122343
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7122275 ttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 7122343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 9223899 - 9223975
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 9223975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 24742577 - 24742501
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 24742501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 31495893 - 31495825
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  31495893 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 31495825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 51521050 - 51520974
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  51521050 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 51520974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 6742835 - 6742946
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||| ||||||||||| || ||||| ||| ||||||||||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||| ||||    
T  6742835 ggtggatgatggttaaaatgacatcaccac-aaattagaagtcaaggtggagaa-tgttgtaaattggcttcaaatttatggtttggaagaacagagaaa 6742932  T
Q  111 tcgtgacacgattt 124  Q
    ||||||||||||||    
T  6742933 tcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 45347317 - 45347392
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  45347317 tgttaaaattggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgatt 45347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 5733247 - 5733171
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||    
T  5733247 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgattt 5733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 13992866 - 13992802
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  13992866 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 13992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 28467990 - 28468054
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||| |||||||||    
T  28467990 cttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattt 28468054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 31985140 - 31985204
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||| |||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  31985140 cttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 31985204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 8689042 - 8689097
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 127  Q
    |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8689042 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 29761227 - 29761182
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29761227 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 5148296 - 5148225
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||| |||||||| || |||||||||||||||||||   | |||||||||||||    
T  5148296 aaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattt 5148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 5268698 - 5268750
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 125  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  5268698 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 34571048 - 34570971
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtg 91  Q
    ||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||   ||| |||||||||||||    
T  34571048 ggtggttgatggttaaagtggcatcatcatc-aatttgaagttaaggtggag-aatgttgtttttgccttcaaatttgtg 34570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3792432 - 3792493
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    ||||||||||||||||| || ||||| ||| || ||||| |||||||||||||||||||||||    
T  3792432 ggtggttgatggttaaattgacatcaccactaatttaga-gtcaaggtggagaaatgttgaaa 3792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 18712295 - 18712331
Alignment:
Q  107 gaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||| |||||||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgattt 18712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 54867796 - 54867745
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  54867796 aattggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 4569674 - 4569721
Alignment:
Q  17 ttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||||    
T  4569674 ttgatggttaaattggcatcatca-ctaatttgaagtcaaggtggagaa 4569721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 9194215 - 9194164
Alignment:
Q  74 attgtcttcaaatttgtggtct-ggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  9194215 attggcttcaaatttgtggttttggaagaacagagaaattgtgacacgattt 9194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 12740179 - 12740129
Alignment:
Q  14 tggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||| |||||||||||||| | | |||| |||||||||||||||||    
T  12740179 tggttgatggctaaagtggcatcattatc-aatttgaagtcaaggtggagaa 12740129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 12748385 - 12748335
Alignment:
Q  14 tggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||| |||||||||||||| | | |||| |||||||||||||||||    
T  12748385 tggttgatggctaaagtggcatcattatc-aatttgaagtcaaggtggagaa 12748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 6e-69; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 6592984 - 6592845
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6592984 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaac 6592885  T
Q  104 agggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6592884 agggaaatcgtgacacgattttgggatcgtgacacgattt 6592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 12397547 - 12397416
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  12397547 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 12397448  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    || |||||||||||||||||||||||||||||    
T  12397447 cgcgacacgattttggtatcgtgacacgattt 12397416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 18390625 - 18390506
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  18390625 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtttagaagaac 18390526  T
Q  104 agggaaatcgtgacacgatt 123  Q
    |||||||||||| |||||||    
T  18390525 agggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 21640478 - 21640347
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  21640478 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 21640379  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  21640378 cgtgacacgattttggcatcgtgacacgattt 21640347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 18409454 - 18409322
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||| ||||||||||||| ||||    
T  18409454 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtagagaaatgttgagatttggcttcaaatttgtgttctggaagaacagagaaa 18409355  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||| |||||| ||||| |||||||||||||||    
T  18409354 tcgtaacacgaatttggcatcgtgacacgattt 18409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 16880715 - 16880586
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| ||| | |||    
T  16880715 ggtggttgatggttaaattgacatcaccaccaatttagaagtcaaggtggagaaatgttggaattgacttcaaattagtggtttggaagagcagaggaat 16880616  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||  |||||||||||||    
T  16880615 cgtgtcacgattttgccatcgtgacacgat 16880586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 24265622 - 24265751
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||| | |||    
T  24265622 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattgacttcaaattagtggtttgggagaacagaggaat 24265721  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||   ||||||||||||    
T  24265722 cgtgtcacgattttgcagtcgtgacacgat 24265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 1562587 - 1562511
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562587 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 1562511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 32060888 - 32060812
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060888 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 32060812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 21983921 - 21983790
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa-ttgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| |  ||||| || ||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  21983921 ggtggttgatggttaaactaacatcaccaacaa-ttagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttggaagaacagagaaa 21983823  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||    |||||||||||||||    
T  21983822 tcgtgacacgatttcatcatcgtgacacgattt 21983790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 6595137 - 6595061
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6595137 tgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgattt 6595061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 2058604 - 2058528
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2058604 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 2058528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4873721 - 4873645
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  4873721 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 4873645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 12406857 - 12406781
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  12406857 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 12406781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 20343500 - 20343576
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgattt 20343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 20357028 - 20357104
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  20357028 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 20357104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 24789435 - 24789503
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24789435 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 24789503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 31109066 - 31109146
Alignment:
Q  63 gaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  31109066 gaaatgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgattt 31109146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 18392780 - 18392705
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  18392780 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 18392705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 43504708 - 43504644
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 43504644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 39730946 - 39731010
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  39730946 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 39731010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 1532897 - 1532958
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacga 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 24023818 - 24023895
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||    
T  24023818 atgttgatattagcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgattt 24023895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 47264267 - 47264190
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| | ||||||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattt 47264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 9189445 - 9189520
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  9189445 ggtggttgatggttaaactgacatcatcatcaa-ttagaagtcaaggtggagaaatgttgtaattgacttcaaattt 9189520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 48408411 - 48408475
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  48408411 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 48408475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20000389 - 20000330
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 71  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  20000389 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttg 20000330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 2479960 - 2479883
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| | ||||||||||||||| || |||||||| ||||| ||||||||||||||| |||||||||||||||    
T  2479960 tgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattt 2479883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 44847619 - 44847696
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| | ||||||||||||||| |  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  44847619 tgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 18414262 - 18414198
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||    
T  18414262 cttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 18414198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 21646630 - 21646566
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | ||||| |||||||||||||||    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgattt 21646566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 21811738 - 21811813
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| | ||| ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||||    
T  21811738 atgttgtatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgat 21811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 47674586 - 47674516
Alignment:
Q  13 gtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaa 84  Q
    ||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||| | ||| ||||||    
T  47674586 gtggttggtggttaaagtggcatcatcatcaattt-gaagtcaaggtggagaaatgttgtatttgccttcaa 47674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 16885518 - 16885441
Alignment:
Q  64 aaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||||| ||||| ||||||||| ||||| ||||||| ||| | ||||||| ||||||||||  |||||||||||||    
T  16885518 aaatgttggaattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat 16885441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 21989531 - 21989454
Alignment:
Q  67 tgttgaaa-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||| ||| ||||||||||||||| ||||||||||| |||||||||||| |||||    |||||||||||||||    
T  21989531 tgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 48491125 - 48491177
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  48491125 ggtggttgatggttaaagtggcatcatcatc-aatttgaagtcaaggtggagaa 48491177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 24260821 - 24260895
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  24260821 tgttggaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 4509369 - 4509335
Alignment:
Q  109 aatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| |||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgattt 4509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 4511211 - 4511177
Alignment:
Q  109 aatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| |||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgattt 4511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 6431467 - 6431501
Alignment:
Q  109 aatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| |||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgattt 6431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 125  Q
    ||||||||||| || ||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 38281765 - 38281793
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatca 40  Q
    |||||||||||||||||||||||||||||    
T  38281765 ggtggttgatggttaaagtggcatcatca 38281793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 46515808 - 46515860
Alignment:
Q  73 aattgtcttcaaatttgtggtct-ggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| |||||||||| |||| | |||||||||| ||||||||||||||||||    
T  46515808 aattggcttcaaatttatggttttggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 1e-63; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 1e-63
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 40381826 - 40381964
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  40381826 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctgaaagaac 40381925  T
Q  104 agggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  40381926 agggaaatcgtgccacgattttggaatcgtgacacgatt 40381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 16546156 - 16546291
Alignment:
Q  7 aaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagg 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  16546156 aaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtttggaagaacagg 16546255  T
Q  107 gaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||| ||||||||||| ||||||||||||||    
T  16546256 gaaatcgtgccacgattttggaatcgtgacacgatt 16546291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 29722097 - 29722229
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga-aattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  29722097 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagatttgtcttcaaatttgtggtctggaagaacagggaaa 29722196  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| ||||| |||||||||||||||    
T  29722197 tcgtgacacgaatttggcatcgtgacacgattt 29722229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 27445621 - 27445490
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||    
T  27445621 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctagaagaacagagaaat 27445522  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  27445521 cgtgacacgattttggcatcgtgacacgattt 27445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 16409022 - 16409154
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga-aattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||| |||||||| ||||    
T  16409022 ggtggttgatggttaaagtgacatcaccaccaaattagaagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtctgaaagaacagagaaa 16409121  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| ||||| |||||||||||||||    
T  16409122 tcgtgacacgaatttggcatcgtgacacgattt 16409154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 43592909 - 43592797
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  43592909 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 43592810  T
Q  112 cgtgacacgattt 124  Q
    |||||||||||||    
T  43592809 cgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 28807021 - 28807150
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| | |||    
T  28807021 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattggcttcaaatttatggtctggaagaacagaggaat 28807120  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||  |||||||||||||    
T  28807121 cgtgtcacgattttgcaatcgtgacacgat 28807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 37560892 - 37561021
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||    
T  37560892 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaatttggcttcaaatttgtggtctggaagaacagagtaat 37560991  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||||||||||||    |||||||||||||    
T  37560992 cgtgacacgatttgataatcgtgacacgat 37561021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 26177432 - 26177543
Alignment:
Q  33 catcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatc 131  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  26177432 catcaccaccaaattagaagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatc 26177531  T
Q  132 gtgacacgattt 143  Q
    ||||||||||||    
T  26177532 gtgacacgattt 26177543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 43625703 - 43625605
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625703 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 33768826 - 33768697
Alignment:
Q  13 gtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| | |||    
T  33768826 gtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaat 33768727  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| | |||||| |  |||||||||||||    
T  33768726 cgtgtcgcgatttggcaatcgtgacacgat 33768697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 10592844 - 10592919
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 10592919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 31401291 - 31401421
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||| || | ||    
T  31401291 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttgggagaatagaggaa 31401390  T
Q  111 tcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| |||||||| |  |||||||||||||    
T  31401391 tcgtgtcacgatttggcaatcgtgacacgat 31401421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 22536852 - 22536776
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  22536852 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgattt 22536776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 40379678 - 40379753
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40379678 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 40379753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 1456637 - 1456714
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  1456637 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 1456714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 9789800 - 9789732
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9789800 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 9789732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 16543993 - 16544069
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  16543993 atgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16544069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 18442224 - 18442156
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18442224 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 18442156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 25077705 - 25077781
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  25077705 atgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25077781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 25135674 - 25135750
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  25135674 atgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 27450409 - 27450333
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27450409 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 27450333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 29719974 - 29720042
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  29719974 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 29720042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 29752381 - 29752313
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  29752381 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 29752313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 30631948 - 30631872
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 30631872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 29402550 - 29402626
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  29402550 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgattt 29402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 43599318 - 43599242
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  43599318 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43599242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 43604810 - 43604734
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  43604810 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43604734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 43610302 - 43610226
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  43610302 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 15045279 - 15045203
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  15045279 tgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 15045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 15465112 - 15465048
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  15465112 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattt 15465048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 26170370 - 26170434
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattt 26170434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 16407654 - 16407718
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  16407654 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattt 16407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 29751715 - 29751647
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||  ||||||||||    
T  29751715 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgattt 29751647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 31180831 - 31180773
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180831 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 37556125 - 37556199
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||||| |  |||||||||||||    
T  37556125 tgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgat 37556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 36931856 - 36931920
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||| ||||||||    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 36931920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 24136470 - 24136407
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||| ||||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaattt 24136407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 9352820 - 9352884
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||| ||| |||||||||||||||    
T  9352820 cttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattt 9352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14520848 - 14520796
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14520848 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 28832816 - 28832772
Alignment:
Q  44 aattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  28832816 aattagaagtcaaggtggagaaatgttgaaattgacttcaaattt 28832772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 13487744 - 13487796
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  13487744 ggtggttgatggttaaagtggcatcatcatc-aatttgaagtcaaggtggagaa 13487796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 33791909 - 33791829
Alignment:
Q  62 agaaatgttgaaa-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||    
T  33791909 agaaatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 25785340 - 25785266
Alignment:
Q  14 tggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttg 89  Q
    ||||||||||||||| | |||||| ||| || ||||| ||||||||||||||||||| |||||| ||| |||||||    
T  25785340 tggttgatggttaaatttgcatcaccactaatttaga-gtcaaggtggagaaatgttaaaattggcttaaaatttg 25785266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 42426879 - 42426805
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatt 87  Q
    ||||||||||  ||||||||||||||||| ||| || ||| ||||||||||||||| ||||||||| ||| |||||    
T  42426879 ggtggttgatacttaaagtggcatcatcatcaattt-gaattcaaggtggagaaatattgaaattgccttgaaatt 42426805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 535457 - 535558
Alignment:
Q  21 tggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 119  Q
    |||||||||||||||||||| | |||| |||| |||||||||||||||||| ||| || ||||||  ||||| |   || |||||| |||||||||||||    
T  535457 tggttaaagtggcatcatcatc-aatttgaaggcaaggtggagaaatgttgtaaagtgccttcaa--ttgtgattgtgaggaacagagaaatcgtgacac 535553  T
Q  120 gattt 124  Q
    |||||    
T  535554 gattt 535558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 2785957 - 2785888
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||    
T  2785957 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 2785888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 31396495 - 31396564
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  31396495 aaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 35388233 - 35388196
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtga 116  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  35388233 cttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 25767275 - 25767346
Alignment:
Q  14 tggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaat 86  Q
    ||||||||||||||| |||||||| ||| || |||| |||||||||||| ||||||| |||||| ||| ||||    
T  25767275 tggttgatggttaaattggcatcaccactaatttag-agtcaaggtggaaaaatgttaaaattggcttaaaat 25767346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||| |||||| |||| ||||||||||| ||||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 11916457 - 11916502
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 31004645 - 31004704
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacag-ggaaatcgtgacacgatttt 125  Q
    ||||||| ||||||||||||||||| | ||| |||||||  ||||||||| |||||||||    
T  31004645 tgttgaatttgtcttcaaatttgtgttttgggagaacagatgaaatcgtgtcacgatttt 31004704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 9e-62; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 16554399 - 16554530
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16554399 ggtggttgatggttaaagtggcatcatcgccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaacagggaaat 16554498  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||||||||||||||||||||||||    
T  16554499 cgtgacatgattttggtatcgtgacacgattt 16554530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 16630955 - 16631086
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16630955 ggtggttgatggttaaagtggcatcatcgccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaacagggaaat 16631054  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||||||||||||||||||||||||    
T  16631055 cgtgacatgattttggtatcgtgacacgattt 16631086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 34166611 - 34166742
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  34166611 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 34166710  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  34166711 cgtgacacgattttggtatcgtgacgcgattt 34166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 11857622 - 11857491
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  11857622 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 11857523  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  11857522 cgtgacacgattttggcatcgtgacacgattt 11857491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 14741871 - 14742002
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  14741871 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 14741970  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  14741971 cgtgacacgattttggcatcgtgacacgattt 14742002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 16652661 - 16652773
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16652661 ggtggttgatggttaaagtggcatcatcaccaaatttgaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctgaaagaacagggaaat 16652760  T
Q  112 cgtgacacgattt 124  Q
    |||||||||||||    
T  16652761 cgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 16579101 - 16579025
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579101 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 16579025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 16616279 - 16616355
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616279 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 16616355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 33335374 - 33335504
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| | ||    
T  33335374 ggtggttgatggttatattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaa 33335473  T
Q  111 tcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||  | |||||| |  |||||||||||||    
T  33335474 tcgtttcgcgatttggcaatcgtgacacgat 33335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22010188 - 22010265
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  22010188 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 22010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 6136547 - 6136471
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  6136547 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgattt 6136471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 25420797 - 25420873
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  25420797 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgattt 25420873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 27647476 - 27647544
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgattt 27647544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 30125018 - 30125094
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  30125018 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 30125094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 3073334 - 3073266
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  3073334 ttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgattt 3073266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 13150857 - 13150925
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 13150925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 6439083 - 6439008
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  6439083 tgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgatt 6439008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 6097977 - 6097909
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  6097977 ttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgattt 6097909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 33342688 - 33342612
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||| ||||||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgattt 33342612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 16568578 - 16568652
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatt 87  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||||    
T  16568578 ggtggttgacggttaaagtggcatcatcaccaa-ttagaagtcaaggcggagaaatgttgaaactgccttcaaatt 16568652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 6026832 - 6026910
Alignment:
Q  65 aatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||  || || ||||||||||||    
T  6026832 aatgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgattt 6026910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 411694 - 411762
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||| ||||    
T  411694 ttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaattt 411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 26253598 - 26253666
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  26253598 ttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattt 26253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 34151836 - 34151904
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  34151836 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgattt 34151904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 34164452 - 34164520
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  34164452 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgattt 34164520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 23896958 - 23896880
Alignment:
Q  66 atgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| | ||||||||||||||| || ||||||||  |||||||||||||||||||| |||||||||||||||    
T  23896958 atgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 23896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 5266653 - 5266596
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5266653 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 14737085 - 14737142
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14737085 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 5674242 - 5674306
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||| |||||    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattt 5674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 22709632 - 22709568
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||||||    
T  22709632 cttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattt 22709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 2172090 - 2172027
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| |||||||||||||||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgattt 2172027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 28155090 - 28155145
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 122  Q
    ||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155090 tgttggaattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 5344064 - 5343990
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| ||||||||| |||||||| |  |||||||||||||    
T  5344064 tgttggaattggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 5016975 - 5017026
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  5016975 aattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 31085952 - 31086003
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31085952 aattggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 5406802 - 5406750
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||||||||||    
T  5406802 ggtggttgatggttaaagtggcatcatcatc-aatttcaagtcaaggtggagaa 5406750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 5407570 - 5407518
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||| ||||||||||||||||||||||| | |||| |||||||||||||||||    
T  5407570 ggtggatgatggttaaagtggcatcatcatc-aatttgaagtcaaggtggagaa 5407518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 5411127 - 5411075
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||||||||||    
T  5411127 ggtggttgatggttaaagtggcatcatcatc-aatttcaagtcaaggtggagaa 5411075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 5411895 - 5411843
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||| ||||||||||||||||||||||| | |||| |||||||||||||||||    
T  5411895 ggtggatgatggttaaagtggcatcatcatc-aatttgaagtcaaggtggagaa 5411843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 5571749 - 5571806
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||| ||||||||||||||||| | ||| |||| || ||||||||||||||||||    
T  5571749 tgttgaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 16839325 - 16839256
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||    
T  16839325 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 16839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 33329938 - 33330007
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||    
T  33329938 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17759262 - 17759321
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga 72  Q
    ||||||||||||||||| |||||||| ||| || |||| ||||||||||||||| ||||||    
T  17759262 ggtggttgatggttaaattggcatcaacacaaatttag-agtcaaggtggagaattgttga 17759321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 24715000 - 24714938
Alignment:
Q  64 aaatgttgaaa-ttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||| ||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  24715000 aaatgttgaaaattggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 6006001 - 6005932
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||||| ||||| | ||||||| | |||||| |  |||||||||||||    
T  6006001 aaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 6005932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 119  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 24435393 - 24435445
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||| | || |||||||||| ||||| ||||||||||||||||    
T  24435393 ggtggttgatggttatattgacatcatcacc-aattataagtcaaggtggagaa 24435445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 28038309 - 28038258
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggaga 64  Q
    ||||||||||||||||| ||| |||||||| || ||| |||||||||||||||    
T  28038309 ggtggttgatggttaaattggtatcatcactaattta-aagtcaaggtggaga 28038258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 18234701 - 18234650
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||| ||||||||||| ||||||||||| |||||  |||||||||||    
T  18234701 aattggctttaaatttgtggtttggaagaacagagaaatgttgacacgattt 18234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 9e-62; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 4599170 - 4599031
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4599170 aagaagggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtttggaagaac 4599071  T
Q  104 agggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  4599070 agggaaatcgtgacacgattttgggatcgcgacacgattt 4599031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 10210915 - 10211054
Alignment:
Q  4 aagaaaggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaac 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  10210915 aagaagggggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtctttaaatttgtggtttggaagaac 10211014  T
Q  104 agggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  10211015 agggaaatcgtgacacgattttggtatcgtgacgcgattt 10211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 10057972 - 10058103
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10057972 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 10058071  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  10058072 cgtgacacgattttggtatcgtgacgcgattt 10058103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 10060194 - 10060325
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10060194 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 10060293  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  10060294 cgtgacacgattttggtatcgtgacgcgattt 10060325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 10062416 - 10062547
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10062416 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 10062515  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  10062516 cgtgacacgattttggtatcgtgacgcgattt 10062547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 10064638 - 10064769
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10064638 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 10064737  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  10064738 cgtgacacgattttggtatcgtgacgcgattt 10064769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 10066860 - 10066991
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10066860 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagtttgtcttcaaatttgtggtttggaagaacagggaaat 10066959  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||| ||||||    
T  10066960 cgtgacacgattttggtatcgtgacgcgattt 10066991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 6718233 - 6718345
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6718233 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaacagggaaat 6718332  T
Q  112 cgtgacacgattt 124  Q
    |||||||||||||    
T  6718333 cgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 28503264 - 28503395
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||    
T  28503264 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggcctggaagaacagagaaat 28503363  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  28503364 cgtgacacgattttggcatcgtgacacgattt 28503395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 22172607 - 22172738
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||| | ||  |||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  22172607 ggtggttgatggttatattgatatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 22172706  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  22172707 cgtgacacgattttggcatcgtgacacgattt 22172738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 1306659 - 1306527
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga-aattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||| ||||    
T  1306659 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgagatttggcttcaaatttatggtctggaagaacagagaaa 1306560  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||| || ||||| |||||||||||||||    
T  1306559 tcgtgacatgaatttggcatcgtgacacgattt 1306527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 23198585 - 23198453
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  23198585 ggtggttgatggttaaattgacatcaccaacaaattagaagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtctggaagaacagagaaa 23198486  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| ||||  |||||||||||||||    
T  23198485 tcgtgacacgaatttgacatcgtgacacgattt 23198453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 2676519 - 2676649
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgtt-gaaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| | ||    
T  2676519 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttggaatttggcttcaaatttgtggtctggaagaacagaggaa 2676618  T
Q  111 tcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| ||||||||||  |||||||||||||    
T  2676619 tcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 32476127 - 32475997
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaa-attgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||| | ||    
T  32476127 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaagattggcttcaaatttgtggtttgggagaacagaggaa 32476028  T
Q  111 tcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| |||||||| |  |||||||||||||    
T  32476027 tcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 37407988 - 37408113
Alignment:
Q  18 tgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 116  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||  ||||||||||    
T  37407988 tgatggttaaagtggcatcatcatcaattt-gaagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtga 37408086  T
Q  117 cacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||| |||||||||||||||    
T  37408087 cacgattgtggcatcgtgacacgattt 37408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 3617033 - 3617110
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617033 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 3617110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 8512882 - 8512753
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||| | |||    
T  8512882 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattgacttcaaattagtggtttgggagaacagaggaat 8512783  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||   ||||||||||||    
T  8512782 cgtgtcacgattttgcagtcgtgacacgat 8512753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 6716085 - 6716161
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716085 tgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 6716161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 54634704 - 54634786
Alignment:
Q  61 gagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  54634704 gagaagtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgattt 54634786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 3327787 - 3327863
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3327787 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaattgacttcaaattt 3327863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4601328 - 4601252
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  4601328 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgattt 4601252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 10055813 - 10055881
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10055813 ttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10055881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 10208778 - 10208854
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  10208778 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgattt 10208854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 25637013 - 25637089
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  25637013 tgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgattt 25637089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 40372256 - 40372332
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  40372256 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 40372332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 800694 - 800762
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  800694 ttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 800762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 8478002 - 8477926
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgattt 8477926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 28501152 - 28501228
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  28501152 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 28501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 37466951 - 37466876
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  37466951 ggtggttgatggttaaactgacatcatcaccaa-ttagaagtcaaggtggagaaatgttgaaattgacttcaaattt 37466876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 36029750 - 36029658
Alignment:
Q  33 catcatcaccaaattagaagtcaaggtggagaaatgttgaa-attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 125  Q
    ||||| ||||||||||||||| ||||||||||| ||||| | |||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36029750 catcaccaccaaattagaagttaaggtggagaa-tgttgtatattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 36029658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282585 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 7167882 - 7167806
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  7167882 tgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaattt 7167806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 7782699 - 7782635
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  7782699 cttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 7782635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 18657029 - 18656953
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||    
T  18657029 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgattt 18656953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 23200716 - 23200652
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  23200716 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 23200652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 26928093 - 26928157
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  26928093 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 26928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 40734953 - 40735063
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||| |||||||||||||||||||||||| ||| || ||||||||||||||||| |||||    |||||||||||||||||| |||| ||||||  ||||    
T  40734953 ggtgattgatggttaaagtggcatcatcatcaattt-gaagtcaaggtggagaa-tgttgtgtatgtcttcaaatttgtggtttggatgaacagataaat 40735050  T
Q  112 cgtgacacgattt 124  Q
    |||||||||||||    
T  40735051 cgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 6794165 - 6794240
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatt 87  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||    
T  6794165 ggtggttgatggttaaactgacatcatcaccacattagaagtcaaggtggagaaatgttgtaattgactttaaatt 6794240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 37726286 - 37726222
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  37726286 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattt 37726222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 27352097 - 27352157
Alignment:
Q  83 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 27352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 33386150 - 33386214
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| | |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  33386150 cttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 33386214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 2672431 - 2672493
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 8738542 - 8738599
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  8738542 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 9090780 - 9090837
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  9090780 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 21711820 - 21711768
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21711820 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 27453568 - 27453504
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||| ||| ||||| ||||||||| ||||| |||||||||||||||    
T  27453568 cttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattt 27453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 27974433 - 27974493
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27974433 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29812587 - 29812658
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaa 84  Q
    |||||||||||||||||||| |||||||| | |||| ||||||||||||||||||||||| | ||| ||||||    
T  29812587 ggtggttgatggttaaagtgacatcatcatc-aatttgaagtcaaggtggagaaatgttgtatttgccttcaa 29812658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  76 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 4386447 - 4386505
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 71  Q
    ||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||    
T  4386447 ggtggttgatggttaaattgacatcatcaccaatttag-agtcaaggtggagaaatgttg 4386505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 32143915 - 32143868
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32143915 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 39032013 - 39032075
Alignment:
Q  63 gaaatgttgaaa-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||||||||| ||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  39032013 gaaatgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 7763977 - 7764034
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 71  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||    
T  7763977 ggtggttgatggttaaagtggcatcatcatc-aatttgaagtcaaggtgga-aaatgttg 7764034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 5258769 - 5258717
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||||||||||| |||||||| | |||| |||||||||||||||||    
T  5258769 ggtggttgatggttaaagtgacatcatcatc-aatttgaagtcaaggtggagaa 5258717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 44331094 - 44331146
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||||||||||| |||||||| | |||| |||||||||||||||||    
T  44331094 ggtggttgatggttaaagtgacatcatcatc-aatttgaagtcaaggtggagaa 44331146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 1730915 - 1730959
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 117  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730915 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 27038660 - 27038608
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  27038660 aaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 32480922 - 32480855
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  32480922 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 40592251 - 40592302
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| ||||||||| | |||||||||||| |||||    
T  40592251 aattggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 16498636 - 16498694
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  16498636 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 24968704 - 24968630
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| ||||| ||||||||| ||||| ||||||||||  | ||||||| |||||||| |  |||||||||||||    
T  24968704 tgttggaattgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgat 24968630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 40845270 - 40845220
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 125  Q
    |||||||||||||| || | ||| ||||||| |||||||||||||||||||    
T  40845270 ttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 43402652 - 43402543
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||||||||||||||  | |||| |||| |||||||||| ||||||| ||| ||  |||||  ||||| | |||||||| || ||||    
T  43402652 ggtggttgatggttaaagtggcatcatcttc-aatttgaaggcaaggtggag-aatgttgtaaagtgctttcaa--ttgtgttttggaagaatagagaaa 43402557  T
Q  111 tcgtgacacgattt 124  Q
    |||||| |||||||    
T  43402556 tcgtgaaacgattt 43402543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||| ||||||||||| || |||||||| ||||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 9634944 - 9634892
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||||||||||| |||||||| | | || |||||||||||||||||    
T  9634944 ggtggttgatggttaaagtgacatcatcatc-agtttgaagtcaaggtggagaa 9634892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 24694655 - 24694706
Alignment:
Q  74 attgtcttcaaatttgtggtct-ggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| | |||||||||| |||||||||| |||||||    
T  24694655 attggcttcaaatttgtggttttggaagaacagagaaatcgtgatacgattt 24694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 3e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 33037232 - 33037363
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  33037232 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 33037331  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  33037332 cgtgacacgattttggcatcgtgacacgattt 33037363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 18869969 - 18870097
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||   ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  18869969 ggtggttgatggttaaactgacatc---accaaattagaagtcaatgtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 18870065  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  18870066 cgtgacacgattttggcatcgtgacacgattt 18870097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 10688563 - 10688675
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  10688563 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgatattggcttcaaatttgtggtctggaagaacagagaaat 10688662  T
Q  112 cgtgacacgattt 124  Q
    |||||||||||||    
T  10688663 cgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 39784325 - 39784400
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 39784400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 42575910 - 42575833
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  42575910 atgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgattt 42575833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 10683739 - 10683815
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 10683815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 30656282 - 30656206
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  30656282 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 30656206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 36980014 - 36979938
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 36979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 3439085 - 3439164
Alignment:
Q  64 aaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  3439085 aaatgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgattt 3439164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 2627331 - 2627395
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  2627331 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 2627395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 4759534 - 4759610
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  4759534 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgattt 4759610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 7289427 - 7289503
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgattt 7289503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 15290143 - 15290219
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||    
T  15290143 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgattt 15290219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 15470512 - 15470588
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||    
T  15470512 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgattt 15470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 18852627 - 18852703
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  18852627 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgattt 18852703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 6311928 - 6311859
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgattt 6311859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 7412952 - 7412876
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 7412876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 25327664 - 25327740
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||    
T  25327664 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgattt 25327740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 25689561 - 25689618
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689561 tgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 19751834 - 19751909
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    ||||||||||||||||| || |||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  19751834 ggtggttgatggttaaactgacatcgtcaccaa-ttagaagtcaaggtggagaaatgttgtaattgacttcaaattt 19751909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 26288504 - 26288440
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  26288504 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26288440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 26301761 - 26301697
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  26301761 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26301697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 26313755 - 26313691
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  26313755 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattt 26313691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 31042921 - 31042985
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||    
T  31042921 cttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgattt 31042985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 35741176 - 35741124
Alignment:
Q  13 gtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||||||||    
T  35741176 gtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaa 35741124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 1261428 - 1261491
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| ||||| |||||||||||||||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgattt 1261491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 5701958 - 5702009
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5701958 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 26268838 - 26268777
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    |||| ||||| |||||| |||||||||||| || ||||| |||||||||||||||||||||||    
T  26268838 ggtgattgatagttaaattggcatcatcactaatttaga-gtcaaggtggagaaatgttgaaa 26268777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 4456620 - 4456575
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 15949126 - 15949182
Alignment:
Q  17 ttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    |||||||||||| ||| |||||| |||| ||||| |||||||||||||||||||||||    
T  15949126 ttgatggttaaattggtatcatcgccaatttaga-gtcaaggtggagaaatgttgaaa 15949182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 34254952 - 34254900
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||||||||||||||||||| |||||||| | |||| |||||||||||||||||    
T  34254952 ggtggttgatggttaaagtgacatcatcatc-aatttgaagtcaaggtggagaa 34254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 35745973 - 35745904
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||    
T  35745973 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 35745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 10014685 - 10014743
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 71  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10014685 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 10014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19492308 - 19492248
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    ||||||||||||||||  || ||||| || ||||||||| |||||||||||||||||||||||    
T  19492308 ggtggttgatggttaat-tgacatcaccatcaaattaga-gtcaaggtggagaaatgttgaaa 19492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 26402624 - 26402681
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgtt 70  Q
    ||||||||||||||||| |  ||||| |||||| ||||| |||||||||||||||||||    
T  26402624 ggtggttgatggttaaatttacatcaccaccaatttaga-gtcaaggtggagaaatgtt 26402681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 41365460 - 41365408
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    |||| |||||||||||||||||||||||| | |||| |||| ||||||||||||    
T  41365460 ggtgattgatggttaaagtggcatcatcatc-aatttgaaggcaaggtggagaa 41365408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||||||||||| || |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 40220262 - 40220203
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga 72  Q
    ||||||||||||||||| | ||||||||| ||  |||| ||||||||||||||| ||||||    
T  40220262 ggtggttgatggttaaattagcatcatcatcattttag-agtcaaggtggagaattgttga 40220203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 8e-50; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 8e-50
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 41391240 - 41391109
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||    
T  41391240 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttgattttggcttcaaatttgtggtctggaagaacagagaaat 41391141  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||| |||||||||||||||    
T  41391140 cgtgacacgattttggaatcgtgacacgattt 41391109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 25444537 - 25444668
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | |||    
T  25444537 ggtggttgatggttaaactgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattggcttcaaatttgtggtctggaagaacagagcaat 25444636  T
Q  112 cgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||| |  |||||||||||||||    
T  25444637 cgtgacacgatttggtaatcgtgacacgattt 25444668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 44023343 - 44023452
Alignment:
Q  33 catcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcg 132  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44023343 catcaccaccaaattagaattcaaggtggagaaatgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcg 44023442  T
Q  133 tgacacgatt 142  Q
    ||||||||||    
T  44023443 tgacacgatt 44023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 19360857 - 19360989
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||| |||||||| ||||    
T  19360857 ggtggttgatggttaaactgacatcaccaccaaattataagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtctgaaagaacagagaaa 19360956  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| |||||||||||||||||||||    
T  19360957 tcgtgacacgaatttggtatcgtgacacgattt 19360989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 9036002 - 9036079
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036002 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 9036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 44203218 - 44203293
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44203218 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgatt 44203293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 21053540 - 21053616
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 21053616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 39446082 - 39446006
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  39446082 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 39446006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 20622812 - 20622744
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20622812 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 20622744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 13599078 - 13598967
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga-aattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    |||||||| |||||||| || ||||| |||||| |||||||||||||||||||| |||||  ||||| ||||||||||||||| ||||||||||| ||||    
T  13599078 ggtggttgctggttaaattgacatcaccaccaa-ttagaagtcaaggtggagaa-tgttgttaattggcttcaaatttgtggtttggaagaacagagaaa 13598981  T
Q  111 tcgtgacacgattt 124  Q
    ||||||||||||||    
T  13598980 tcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 1054513 - 1054589
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||    
T  1054513 atgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgatt 1054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 40281967 - 40282035
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  40281967 ttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgattt 40282035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 47102279 - 47102354
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaattt 88  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  47102279 ggtggttgatggttaaattgacatcatcaccaa-ttagaagtcaaggtggagaaatgttgaaattgacttcaaattt 47102354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 13604091 - 13604172
Alignment:
Q  63 gaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  13604091 gaaatgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 13604172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 9986794 - 9986862
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||    
T  9986794 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgattt 9986862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 24202264 - 24202328
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  24202264 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 24202328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 19365781 - 19365845
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  19365781 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 19365845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 25439399 - 25439475
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||| |  |||||||||||||||    
T  25439399 tgttggaattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 24793666 - 24793723
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24793666 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 51765007 - 51765067
Alignment:
Q  83 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  51765007 aaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattt 51765067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 28220859 - 28220796
Alignment:
Q  24 ttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatt 87  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  28220859 ttaaattggcatcatcaccaa-ttagaagtcaaggtggagaaatgttgaaaattgacttcaaatt 28220796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 41398826 - 41398764
Alignment:
Q  62 agaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||  ||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398826 agaactgttgattttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 21536125 - 21536170
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 776793 - 776855
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaat 75  Q
    |||||||||||||||||||  ||||| || ||| ||||| ||||||||||||||||||||||||    
T  776793 ggtggttgatggttaaagttccatcaccatcaatttaga-gtcaaggtggagaaatgttgaaat 776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 26644379 - 26644450
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| ||| ||||||||||| ||||||||||| | |||||||| |||||||||  ||||| |||||||||    
T  26644379 aaattggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 50167791 - 50167729
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaat 75  Q
    |||||||||||||||||||  ||||| || ||| ||||| ||||||||||||||||||||||||    
T  50167791 ggtggttgatggttaaagtttcatcaccatcaatttaga-gtcaaggtggagaaatgttgaaat 50167729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 47703333 - 47703391
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 71  Q
    ||||||||||||||||| || ||||| |||||| |||| |||||||||||| ||||||||    
T  47703333 ggtggttgatggttaaattgacatcaccaccaatttag-agtcaaggtggataaatgttg 47703391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 3282331 - 3282273
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||||||| | |||||||||||||||  ||||||||||  |||||||||||||||||    
T  3282331 tgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 13659898 - 13659840
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  13659898 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 41360473 - 41360533
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    ||||||||||||||||  || ||||| || ||||||||| |||||||||||||||||||||||    
T  41360473 ggtggttgatggttaat-tgacatcaccatcaaattaga-gtcaaggtggagaaatgttgaaa 41360533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  83 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 155375 - 155426
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggaga 64  Q
    ||||||||||||||||| ||||||||||||  | |||| ||||||||||||||    
T  155375 ggtggttgatggttaaattggcatcatcacttatttag-agtcaaggtggaga 155426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 93; Significance: 1e-45; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 9363 - 9231
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  9363 ggtggttgatggttaaagtgacatcaccatcaaattagaagtcaaggtggagaaatgttgagatttggcttcaaatttgtggtctggaagaacagagaaa 9264  T
Q  111 tcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| ||||| |||||||||||||||    
T  9263 tcgtgacacgaatttggcatcgtgacacgattt 9231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 11740 - 11676
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  11740 cttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 11676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 89; Significance: 3e-43; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 4338 - 4234
Alignment:
Q  39 caccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacac 138  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  4338 caccaaattagaagttaaggtggagaaatgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacac 4239  T
Q  139 gattt 143  Q
    |||||    
T  4238 gattt 4234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 78; Significance: 1e-36; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 1684 - 1813
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| | |||    
T  1684 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattgacttcaaattagtggtttggaagaacagaggaat 1783  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| |||||||| |  |||||||||||||    
T  1784 cgtgtcacgatttggcaatcgtgacacgat 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 74; Significance: 3e-34; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 13729 - 13858
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||| | |||    
T  13729 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttggaattgacttcaaattagtggtttgggagaacagaggaat 13828  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||||   ||||||||||||    
T  13829 cgtgtcacgattttgcagtcgtgacacgat 13858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 18608 - 18738
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||| | ||    
T  18608 ggtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttgggagaacagaggaa 18707  T
Q  111 tcgtgacacgattttggtatcgtgacacgat 141  Q
    ||||| | |||||| |  |||||||||||||    
T  18708 tcgtgtcgcgatttggcaatcgtgacacgat 18738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 6e-32; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 19345064 - 19344935
Alignment:
Q  13 gtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg-aaattgtcttcaaatttgtggtctggaagaacagggaaat 111  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| | |||    
T  19345064 gtggttgatggttaaattgacatcaccaccaaattagaagtcaaggtggagaaatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaat 19344965  T
Q  112 cgtgacacgattttggtatcgtgacacgat 141  Q
    |||| | |||||| |  ||||||| |||||    
T  19344964 cgtgtcgcgatttggcaatcgtgatacgat 19344935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 12647967 - 12647891
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12647967 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 12647891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 44310470 - 44310547
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  44310470 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 9295862 - 9295938
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  9295862 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 9295938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 32247352 - 32247276
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32247352 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 39811477 - 39811553
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  39811477 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 39811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 14292125 - 14292051
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 14292051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 11098387 - 11098463
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  11098387 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgattt 11098463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 39483554 - 39483443
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaa-attgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    ||||||||||||||||| || ||||| |||||| |||||||||||||||||||| |||||   |||| ||||||||||||||| ||||||||||| ||||    
T  39483554 ggtggttgatggttaaattgacatcaccaccaa-ttagaagtcaaggtggagaa-tgttgtttattggcttcaaatttgtggtttggaagaacagagaaa 39483457  T
Q  111 tcgtgacacgattt 124  Q
    | ||||||||||||    
T  39483456 ttgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 4484910 - 4484846
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  4484910 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 4484846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 25410253 - 25410189
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 25410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 32289161 - 32289225
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  32289161 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 32289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 14634457 - 14634383
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatt 87  Q
    ||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  14634457 ggtggctgatggttaaagtgacatcatcgccaa-ttagaagtcaaggtggagaaatgttgaaattgtctttaaatt 14634383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 6266283 - 6266351
Alignment:
Q  75 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||| ||||    
T  6266283 ttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaattt 6266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 40739444 - 40739380
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||||    
T  40739444 cttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattt 40739380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 3492364 - 3492300
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||||||| ||||| ||||||||| ||||| |||||||||||||||    
T  3492364 cttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattt 3492300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 30832934 - 30832998
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||  |||||||||||||||    
T  30832934 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgattt 30832998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 36757423 - 36757477
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||| ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  36757423 aaattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 28258669 - 28258729
Alignment:
Q  67 tgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||||||| | ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  28258669 tgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 33528104 - 33528155
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  33528104 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 31056746 - 31056685
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaa 74  Q
    ||||||||||| ||||| || ||||| |||||| ||||| |||||||||||||||||||||||    
T  31056746 ggtggttgatgattaaattgacatcaccaccaatttaga-gtcaaggtggagaaatgttgaaa 31056685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 20522839 - 20522794
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 118  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522839 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||| ||||||| || |||| ||||||||||| ||||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 13828891 - 13828839
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaa 65  Q
    ||||||||||||||||| || ||||||||| || |||| |||||||||||||||    
T  13828891 ggtggttgatggttaaattgacatcatcacaaatttag-agtcaaggtggagaa 13828839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 69; Significance: 2e-31; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 3185 - 3109
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3185 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1709 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 61; Significance: 1e-26; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 5858 - 5934
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5858 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgatt 5934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 945 - 870
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 142  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  945 tgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 9e-25; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 6363 - 6252
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttga-aattgtcttcaaatttgtggtctggaagaacagggaaa 110  Q
    |||||||| |||||||| || ||||| |||||| |||||||||||||||||||| |||||  ||||| ||||||||||||||| ||||||||||| ||||    
T  6363 ggtggttgctggttaaattgacatcaccaccaa-ttagaagtcaaggtggagaa-tgttgttaattggcttcaaatttgtggtttggaagaacagagaaa 6266  T
Q  111 tcgtgacacgattt 124  Q
    ||||||||||||||    
T  6265 tcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 132748 - 132829
Alignment:
Q  63 gaaatgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  132748 gaaatgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 3111 - 3060
Alignment:
Q  73 aattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||| ||||||||||||||| ||||||||||| |||||| |||||||||||    
T  3111 aattggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 149659 - 149601
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  149659 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 57; Significance: 4e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 34554 - 34630
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactattt 34630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 53; Significance: 9e-22; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 3337 - 3413
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||  |||||||||||||||    
T  3337 tgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgattt 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 53; Significance: 9e-22; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 17444 - 17508
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  17444 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 17508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 49; Significance: 2e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 7924 - 7988
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  7924 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 7988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 1082 - 1160
Alignment:
Q  66 atgttgaaatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||| | ||||||||||||||| || ||||||||  |||||||||||||||||||| |||||||||||||||    
T  1082 atgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 46; Significance: 1e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 8273 - 8216
Alignment:
Q  67 tgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8273 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 21953 - 22016
Alignment:
Q  80 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| |||||||||||||||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgattt 22016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 43447 - 43511
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    |||||||||| |||| |||||||| || ||||||||||||||||| ||| |||||||||||||||    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattt 43511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 36330 - 36384
Alignment:
Q  72 aaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    |||||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  36330 aaattggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 45791 - 45744
Alignment:
Q  79 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 126  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  45791 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 32828 - 32754
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttgaaattgtcttcaaatt 87  Q
    ||||||||||||||||| || |||||||||| | ||| ||||||| ||||| |||| ||| |||||||||||||||    
T  32828 ggtggttgatggttaaattgacatcatcacctattta-aagtcaaagtggaaaaatattgtaattgtcttcaaatt 32754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 148443 - 148518
Alignment:
Q  66 atgttgaaattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||||| ||||| ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    
T  148443 atgttggaattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 86225 - 86153
Alignment:
Q  53 tcaaggtggagaaatgttgaa-attgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattt 124  Q
    ||||||||||||| ||||| | |||| |||||||||| ||||| |||||||| || ||||||||||||||||||    
T  86225 tcaaggtggagaa-tgttgtatattggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1908 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 1083 - 1111
Alignment:
Q  12 ggtggttgatggttaaagtggcatcatca 40  Q
    |||||||||||||||||||||||||||||    
T  1083 ggtggttgatggttaaagtggcatcatca 1111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 523 - 559
Alignment:
Q  107 gaaatcgtgacacgattttggtatcgtgacacgattt 143  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgattt 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 176457 - 176524
Alignment:
Q  74 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 141  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 176524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University