View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5853-20 (Length: 138)

Name: Solexa-NF5853-20
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5853-20
Solexa-NF5853-20
[»] chr6 (24 HSPs)
chr6 (7-138)||(16554775-16554906)
chr6 (7-138)||(16631331-16631462)
chr6 (7-138)||(16653018-16653149)
chr6 (8-138)||(16578650-16578780)
chr6 (8-138)||(16616600-16616730)
chr6 (7-130)||(25421219-25421342)
chr6 (7-132)||(27647775-27647898)
chr6 (7-130)||(6027162-6027283)
chr6 (7-130)||(33342238-33342359)
chr6 (7-130)||(34164772-34164893)
chr6 (7-130)||(34166994-34167115)
chr6 (10-132)||(412014-412135)
chr6 (10-132)||(3072894-3073016)
chr6 (13-134)||(6097577-6097699)
chr6 (7-64)||(13153893-13153950)
chr6 (10-135)||(31404808-31404940)
chr6 (10-134)||(2171664-2171796)
chr6 (10-135)||(5406333-5406464)
chr6 (10-135)||(5410658-5410789)
chr6 (10-134)||(16452462-16452594)
chr6 (10-135)||(5413527-5413658)
chr6 (7-44)||(4045423-4045460)
chr6 (10-44)||(21588931-21588966)
chr6 (10-44)||(21593664-21593699)
[»] chr1 (15 HSPs)
chr1 (7-138)||(9036323-9036454)
chr1 (10-134)||(9987112-9987236)
chr1 (10-134)||(40282287-40282411)
chr1 (7-134)||(21053868-21053995)
chr1 (10-134)||(20622372-20622496)
chr1 (7-130)||(44203547-44203668)
chr1 (42-132)||(51765300-51765389)
chr1 (10-45)||(13316485-13316521)
chr1 (10-44)||(1833522-1833557)
chr1 (10-44)||(13547222-13547257)
chr1 (10-44)||(13549133-13549168)
chr1 (10-44)||(29136247-29136282)
chr1 (10-44)||(37033206-37033241)
chr1 (10-44)||(37168297-37168332)
chr1 (10-44)||(44455160-44455195)
[»] chr7 (29 HSPs)
chr7 (7-134)||(20343807-20343934)
chr7 (7-130)||(32060456-32060579)
chr7 (7-130)||(1562136-1562257)
chr7 (7-134)||(24789751-24789878)
chr7 (7-130)||(6592472-6592593)
chr7 (7-130)||(6594690-6594811)
chr7 (7-130)||(18388892-18389013)
chr7 (7-130)||(18392328-18392449)
chr7 (10-132)||(43504289-43504411)
chr7 (10-132)||(39731281-39731403)
chr7 (15-134)||(48408705-48408832)
chr7 (10-133)||(29990959-29991088)
chr7 (10-134)||(25767094-25767219)
chr7 (10-134)||(4178678-4178809)
chr7 (10-134)||(35853818-35853949)
chr7 (13-114)||(25615785-25615885)
chr7 (42-134)||(24514934-24515025)
chr7 (10-44)||(2361105-2361140)
chr7 (10-44)||(4586161-4586196)
chr7 (10-44)||(14069966-14070001)
chr7 (10-44)||(14379994-14380029)
chr7 (42-132)||(19502083-19502172)
chr7 (10-44)||(22269973-22270008)
chr7 (9-44)||(23343975-23344010)
chr7 (10-44)||(26417316-26417351)
chr7 (10-44)||(29608737-29608772)
chr7 (10-44)||(34310849-34310884)
chr7 (10-44)||(48489431-48489466)
chr7 (10-44)||(48491579-48491614)
[»] chr5 (24 HSPs)
chr5 (7-138)||(10593164-10593295)
chr5 (7-130)||(25078034-25078157)
chr5 (7-130)||(25136003-25136126)
chr5 (7-134)||(29751291-29751418)
chr5 (10-134)||(29720274-29720398)
chr5 (10-134)||(29722434-29722558)
chr5 (7-130)||(16544323-16544444)
chr5 (7-130)||(16546545-16546666)
chr5 (7-130)||(22536420-22536541)
chr5 (7-130)||(40380006-40380127)
chr5 (7-130)||(40382217-40382338)
chr5 (10-132)||(18441782-18441904)
chr5 (10-132)||(9789358-9789480)
chr5 (10-132)||(16409387-16409509)
chr5 (10-132)||(26177795-26177916)
chr5 (13-132)||(26170686-26170804)
chr5 (10-127)||(25412672-25412795)
chr5 (7-44)||(13695822-13695859)
chr5 (42-134)||(36074218-36074309)
chr5 (10-44)||(213465-213500)
chr5 (10-44)||(533769-533804)
chr5 (10-44)||(5058047-5058082)
chr5 (10-44)||(28750788-28750823)
chr5 (10-44)||(40147261-40147296)
[»] chr3 (33 HSPs)
chr3 (7-134)||(54635035-54635162)
chr3 (7-132)||(6716412-6716537)
chr3 (7-134)||(45282893-45283020)
chr3 (10-132)||(6718596-6718718)
chr3 (7-130)||(3617363-3617486)
chr3 (7-130)||(4600877-4600998)
chr3 (7-130)||(25637342-25637463)
chr3 (7-130)||(4598656-4598777)
chr3 (7-130)||(10209089-10209210)
chr3 (7-130)||(10211309-10211430)
chr3 (7-130)||(10056133-10056254)
chr3 (7-130)||(10058355-10058476)
chr3 (7-130)||(10060577-10060698)
chr3 (7-130)||(10062799-10062920)
chr3 (7-130)||(10065021-10065142)
chr3 (7-130)||(10067243-10067364)
chr3 (10-132)||(801003-801125)
chr3 (10-81)||(7780137-7780208)
chr3 (10-135)||(45095067-45095198)
chr3 (42-134)||(23198111-23198203)
chr3 (42-134)||(23200310-23200402)
chr3 (10-135)||(5260456-5260589)
chr3 (10-132)||(5258277-5258407)
chr3 (10-132)||(9636259-9636390)
chr3 (7-44)||(29196517-29196555)
chr3 (10-44)||(4569952-4569987)
chr3 (10-44)||(5236589-5236624)
chr3 (10-44)||(34491212-34491247)
chr3 (10-44)||(37408458-37408493)
chr3 (10-44)||(40734498-40734533)
chr3 (10-44)||(41819656-41819691)
chr3 (10-44)||(43401935-43401970)
chr3 (10-44)||(44700611-44700646)
[»] chr8 (19 HSPs)
chr8 (7-132)||(3439416-3439541)
chr8 (7-130)||(25689869-25689992)
chr8 (7-130)||(15290438-15290559)
chr8 (7-130)||(15470807-15470928)
chr8 (7-130)||(42575457-42575578)
chr8 (10-132)||(2627647-2627769)
chr8 (10-135)||(34254464-34254594)
chr8 (10-135)||(34256640-34256770)
chr8 (7-44)||(8965822-8965859)
chr8 (10-134)||(17982556-17982688)
chr8 (42-134)||(31218160-31218251)
chr8 (42-133)||(44303758-44303848)
chr8 (10-44)||(4283524-4283559)
chr8 (10-44)||(4731658-4731693)
chr8 (9-44)||(8153764-8153799)
chr8 (10-44)||(9765745-9765780)
chr8 (10-44)||(15212786-15212821)
chr8 (10-44)||(27811278-27811313)
chr8 (10-44)||(43036423-43036458)
[»] chr4 (17 HSPs)
chr4 (7-130)||(7122596-7122719)
chr4 (7-130)||(7124815-7124938)
chr4 (7-130)||(8395519-8395640)
chr4 (7-130)||(8393310-8393431)
chr4 (7-130)||(5138204-5138325)
chr4 (7-130)||(5135978-5136100)
chr4 (13-132)||(31495454-31495573)
chr4 (10-134)||(13992425-13992551)
chr4 (10-133)||(29999940-30000069)
chr4 (11-44)||(37229857-37229890)
chr4 (10-44)||(9927591-9927626)
chr4 (10-44)||(26364236-26364271)
chr4 (42-81)||(35369614-35369653)
chr4 (10-44)||(52095495-52095530)
chr4 (10-44)||(54200039-54200074)
chr4 (10-44)||(54883020-54883055)
chr4 (10-44)||(56178770-56178805)
[»] chr2 (13 HSPs)
chr2 (7-134)||(6266601-6266728)
chr2 (7-130)||(12647518-12647639)
chr2 (10-132)||(32289477-32289598)
chr2 (7-64)||(13656163-13656220)
chr2 (10-134)||(36205797-36205928)
chr2 (10-134)||(45099658-45099790)
chr2 (13-135)||(5723392-5723520)
chr2 (10-132)||(4484464-4484594)
chr2 (42-134)||(4503306-4503397)
chr2 (7-44)||(13121769-13121806)
chr2 (10-44)||(29867869-29867904)
chr2 (10-46)||(30833342-30833380)
chr2 (10-44)||(38312240-38312275)
[»] scaffold0137 (1 HSPs)
scaffold0137 (7-138)||(6180-6309)
[»] scaffold0674 (1 HSPs)
scaffold0674 (7-130)||(3858-3979)
[»] scaffold0565 (1 HSPs)
scaffold0565 (7-130)||(2736-2857)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-134)||(434436-434568)
[»] scaffold1519 (1 HSPs)
scaffold1519 (10-134)||(820-951)
[»] scaffold0491 (2 HSPs)
scaffold0491 (10-132)||(11295-11425)
scaffold0491 (10-46)||(8869-8907)
[»] scaffold0286 (1 HSPs)
scaffold0286 (94-134)||(22247-22286)


Alignment Details
Target: chr6 (Bit Score: 128; Significance: 1e-66; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 1e-66
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 16554906 - 16554775
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16554906 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 16554807  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    ||||||||||||||||||||||||||||||||    
T  16554806 atcaaagaaccctaaaccctagagttgcccct 16554775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 1e-66
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 16631462 - 16631331
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16631462 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 16631363  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    ||||||||||||||||||||||||||||||||    
T  16631362 atcaaagaaccctaaaccctagagttgcccct 16631331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 16653149 - 16653018
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16653149 acaaaccctaatttttacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 16653050  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    ||||||||||||||||||||||||||||||||    
T  16653049 atcaaagaaccctaaaccctagagttgcccct 16653018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 1e-63
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 16578650 - 16578780
Alignment:
Q  8 caaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  16578650 caaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaa 16578749  T
Q  108 tcaaagaaccctaaaccctagagttgcccct 138  Q
    |||||||||||||||||||||||||||||||    
T  16578750 tcaaagaaccctaaaccctagagttgcccct 16578780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 1e-63
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 16616730 - 16616600
Alignment:
Q  8 caaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  16616730 caaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaa 16616631  T
Q  108 tcaaagaaccctaaaccctagagttgcccct 138  Q
    |||||||||||||||||||||||||||||||    
T  16616630 tcaaagaaccctaaaccctagagttgcccct 16616600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 25421342 - 25421219
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25421342 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 25421243  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  25421242 atcaaagaaccctaaaccctagag 25421219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 27647898 - 27647775
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||    
T  27647898 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct--acatggtgtttcccatgttttcaacccaagagatactcta 27647801  T
Q  107 atcaaagaaccctaaaccctagagtt 132  Q
    ||||||||||||||||||||||||||    
T  27647800 atcaaagaaccctaaaccctagagtt 27647775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 6027283 - 6027162
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  6027283 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 6027186  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  6027185 atcaaagaaccctaaaccctagag 6027162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 33342238 - 33342359
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  33342238 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 33342335  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  33342336 atcaaagaaccctaaaccctagag 33342359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 34164893 - 34164772
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  34164893 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 34164796  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  34164795 atcaaagaaccctaaactctagag 34164772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 34167115 - 34166994
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  34167115 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 34167018  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  34167017 atcaaagaaccctaaactctagag 34166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 412135 - 412014
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||  ||||||||    
T  412135 aaccctaatttctacctttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgttttcaacccaagagaagctctaatc 412036  T
Q  110 aaagaaccctaaaccctagagtt 132  Q
    |||| || |||||||||||||||    
T  412035 aaag-actctaaaccctagagtt 412014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 3072894 - 3073016
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||    
T  3072894 aaccctaatttctaccattttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaat 3072993  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  3072994 caaag-actctaaaccctagagtt 3073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 6097577 - 6097699
Alignment:
Q  13 cctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaa-gagatactctaatcaa 111  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||| || ||   |||||||||| |||||||| | | |||| ||||||||||||||||    
T  6097577 cctaatttctaccatttttccaatctcaccaaaacactcaatgattttcactcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaa 6097676  T
Q  112 agaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||    
T  6097677 agaaccctaaaccctagagttgc 6097699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 13153950 - 13153893
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13153950 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct 13153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 31404808 - 31404940
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagata 101  Q
    |||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||||||| | ||||||||| |    
T  31404808 aaccctaatttctaccattttcccaatctcactgatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgttttccaacccaagaga-a 31404906  T
Q  102 ctctaatcaaagaaccctaaaccctagagttgcc 135  Q
    |||||||||||  ||||||||||||| |||||||    
T  31404907 ctctaatcaaaagaccctaaaccctaaagttgcc 31404940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 2171664 - 2171796
Alignment:
Q  10 aaccctaatttctaccctttt-cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagat 100  Q
    |||||||||||||||| |||| ||||||||||||||       |||||||||||||| || ||   |||||||||| | |||||| | | |||||||||     
T  2171664 aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa 2171763  T
Q  101 actctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||| ||||||||||||||||||||    
T  2171764 actctaatcaaag-accctaaaccctagagttgc 2171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 5406333 - 5406464
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagata 101  Q
    |||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||| ||||| |    
T  5406333 aaccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-a 5406431  T
Q  102 ctctaatcaaagaaccctaaaccctagagttgcc 135  Q
    |||||||||||| ||||||||||||| |||||||    
T  5406432 ctctaatcaaag-accctaaaccctaaagttgcc 5406464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 5410658 - 5410789
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagata 101  Q
    |||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||| ||||| |    
T  5410658 aaccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-a 5410756  T
Q  102 ctctaatcaaagaaccctaaaccctagagttgcc 135  Q
    |||||||||||| ||||||||||||| |||||||    
T  5410757 ctctaatcaaag-accctaaaccctaaagttgcc 5410789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 16452462 - 16452594
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    |||||||||||||||||||||  ||||||||||||||       |||||||||||||| || ||   |||||||||| | |||||| || ||||||||||    
T  16452462 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttctcaacccaagaga 16452561  T
Q  100 tactctaatcaaagaaccctaaaccctagagttgc 134  Q
     ||||||||||||| ||||||||| ||| ||||||    
T  16452562 -actctaatcaaag-accctaaactctaaagttgc 16452594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 5413527 - 5413658
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagata 101  Q
    |||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   ||| |||||| | ||||||  | |||| ||||| |    
T  5413527 aaccctaatttctacctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccgagaga-a 5413625  T
Q  102 ctctaatcaaagaaccctaaaccctagagttgcc 135  Q
    |||||||||||| ||||||||||||| |||||||    
T  5413626 ctctaatcaaag-accctaaaccctaaagttgcc 5413658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 4045460 - 4045423
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaa 44  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  4045460 acaaaccctaatttctaccattttcccaatctctccaa 4045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 21588966 - 21588931
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21588966 aaccctaatttctacccattttcccaatctcaccaa 21588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 21593699 - 21593664
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21593699 aaccctaatttctacccattttcccaatctcaccaa 21593664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 1e-66; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 1e-66
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 9036454 - 9036323
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9036454 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 9036355  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    ||||||||||||||||||||||||||||||||    
T  9036354 atcaaagaaccctaaaccctagagttgcccct 9036323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 9987236 - 9987112
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  9987236 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatc 9987137  T
Q  110 aaagaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||||    
T  9987136 aaagaaccctaaaccctagagttgc 9987112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 40282411 - 40282287
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  40282411 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatc 40282312  T
Q  110 aaagaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||||    
T  40282311 aaagaaccctaaaccctagagttgc 40282287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 21053995 - 21053868
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||    
T  21053995 acaaaccctaatttctacacttttcccaatctcaccaagacactcaatgattttttctctacaaggtgtttcccatgttttcaacccaagagatactcta 21053896  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  21053895 atcaaagaaccctaaaccctagagttgc 21053868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 20622372 - 20622496
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||    
T  20622372 aaccctaatttctacccttttcccaatctcaccaagacagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagagatactctaatc 20622471  T
Q  110 aaagaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||||    
T  20622472 aaagaaccctaaaccctagagttgc 20622496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 44203668 - 44203547
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  44203668 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 44203571  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  44203570 atcaaagaaccctaaaccctagag 44203547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 51765389 - 51765300
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagagtt 132  Q
    |||||||||||||||||  | ||   |||||||||| | |||||| | ||||||||||  |||||||||||| ||||||||||||||||||    
T  51765389 caagacactcaatgatttacactcaccaaggtgtttacaatgtttccaacccaagagaagctctaatcaaag-accctaaaccctagagtt 51765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 13316485 - 13316521
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaag 45  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13316485 aaccctaatttctaccctttttcccaatctcaccaag 13316521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 1833557 - 1833522
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1833557 aaccctaatttctacccattttcccaatctcaccaa 1833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 13547222 - 13547257
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13547222 aaccctaatttctacccattttcccaatctcaccaa 13547257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 13549133 - 13549168
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13549133 aaccctaatttctacccattttcccaatctcaccaa 13549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 29136282 - 29136247
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29136282 aaccctaatttctacccattttcccaatctcaccaa 29136247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 37033206 - 37033241
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37033206 aaccctaatttctacccattttcccaatctcaccaa 37033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 37168332 - 37168297
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37168332 aaccctaatttctacccattttcccaatctcaccaa 37168297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 44455195 - 44455160
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44455195 aaccctaatttctacccattttcccaatctcaccaa 44455160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 4e-64; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 20343934 - 20343807
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20343934 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 20343835  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  20343834 atcaaagaaccctaaaccctagagttgc 20343807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 32060456 - 32060579
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32060456 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 32060555  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  32060556 atcaaagaaccctaaaccctagag 32060579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 1562136 - 1562257
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  1562136 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 1562233  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  1562234 atcaaagaaccctaaaccctagag 1562257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 24789878 - 24789751
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  24789878 acaaaccctaatttttacccttttcccaatcttaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactcta 24789779  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  24789778 atcaaagaaccctaaaccctagagttgc 24789751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 6592472 - 6592593
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  6592472 acaaaccctaatttctacccatttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 6592569  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  6592570 atcaaagaaccctaaaccctagag 6592593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 6594690 - 6594811
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  6594690 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 6594787  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  6594788 atcaaagaaccctaaaccctagag 6594811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 18388892 - 18389013
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  18388892 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 18388989  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  18388990 atcaaagaaccctaaaccctagag 18389013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 18392328 - 18392449
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  18392328 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 18392425  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  18392426 atcaaagaaccctaaaccctagag 18392449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 43504289 - 43504411
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||  | | ||||||||  |||||||    
T  43504289 aaccctaatttctacccttttcccaatctcaccaagacactcgatgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaat 43504388  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  43504389 caaag-actctaaaccctagagtt 43504411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 39731403 - 39731281
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||  |||||||    
T  39731403 aaccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaat 39731304  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| ||||||||||||||||||    
T  39731303 caaag-accctaaaccctagagtt 39731281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 48408832 - 48408705
Alignment:
Q  15 taatttctaccctttt-cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagatactct 105  Q
    |||||||||||||||| ||||||||||||||       |||||||||||||| || ||   |||||||||| | |||||| | | ||||||||| |||||    
T  48408832 taatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactct 48408733  T
Q  106 aatcaaagaaccctaaaccctagagttgc 134  Q
    |||||||| ||||||||||||||||||||    
T  48408732 aatcaaag-accctaaaccctagagttgc 48408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 29991088 - 29990959
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagata 101  Q
    |||||||||||||| |||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |    
T  29991088 aaccctaatttctatccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-a 29990990  T
Q  102 ctctaatcaaagaaccctaaaccctagagttg 133  Q
    |||||||||||| ||||||||||||| |||||    
T  29990989 ctctaatcaaag-accctaaaccctaaagttg 29990959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 25767094 - 25767219
Alignment:
Q  10 aaccctaatttctacccttttc-ccaatctcac----caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactc 104  Q
    |||||||||||||||||||||  |||||||||     ||||||||||||||||| || ||   |||||||||| | |||||| | |   |||||| ||||    
T  25767094 aaccctaatttctacccttttttccaatctcaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttccca---aagagaaactc 25767190  T
Q  105 taatcaaagaaccctaaaccctagagttgc 134  Q
    |||||||||| |||||||||||||||||||    
T  25767191 taatcaaaga-ccctaaaccctagagttgc 25767219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 4178809 - 4178678
Alignment:
Q  10 aaccctaatttctaccctttt-cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    |||||||||||||||| |||| ||||||||||||||       |||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||     
T  4178809 aaccctaatttctaccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga- 4178711  T
Q  101 actctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||| ||||||||||||| ||||||    
T  4178710 actctaatcaaag-accctaaaccctaaagttgc 4178678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 35853949 - 35853818
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    ||||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||     
T  35853949 aaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga- 35853851  T
Q  101 actctaatcaaagaaccctaaaccctagagttgc 134  Q
    |||| |||||||| ||||||||||||| ||||||    
T  35853850 actcaaatcaaag-accctaaaccctaaagttgc 35853818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 25615885 - 25615785
Alignment:
Q  13 cctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-ctacccaagagatactctaatc 109  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||| |||||    |||||||||| | ||||||| | |||||||||| |||||||||    
T  25615885 cctaatttctacccattttcccaatctca---agacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaagaga-actctaatc 25615790  T
Q  110 aaaga 114  Q
    |||||    
T  25615789 aaaga 25615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 24514934 - 24515025
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||||||||||| ||||||    
T  24514934 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgc 24515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 2361105 - 2361140
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2361105 aaccctaatttctacccattttcccaatctcaccaa 2361140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4586196 - 4586161
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4586196 aaccctaatttctacccattttcccaatctcaccaa 4586161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 14069966 - 14070001
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14069966 aaccctaatttctaccctttttcccaatctcaccaa 14070001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 14379994 - 14380029
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14379994 aaccctaatttctaccctttttcccaatctcaccaa 14380029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 19502172 - 19502083
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagtt 132  Q
    |||||||||||||||||||| ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||| ||||||| ||||    
T  19502172 caagacactcaatgattctcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagtt 19502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 22270008 - 22269973
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22270008 aaccctaatttctacccattttcccaatctcaccaa 22269973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 23344010 - 23343975
Alignment:
Q  9 aaaccctaatttctacccttttcccaatctcaccaa 44  Q
    ||||| |||||||||||||||||| |||||||||||    
T  23344010 aaaccttaatttctacccttttccaaatctcaccaa 23343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 26417351 - 26417316
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26417351 aaccctaatttctacccattttcccaatctcaccaa 26417316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 29608772 - 29608737
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29608772 aaccctaatttctacccattttcccaatctcaccaa 29608737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 34310849 - 34310884
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34310849 aaccctaatttctacccattttcccaatctcaccaa 34310884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 48489466 - 48489431
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  48489466 aaccctaatttctacccattttcccaatctcaccaa 48489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 48491614 - 48491579
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  48491614 aaccctaatttctacccattttcccaatctcaccaa 48491579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 4e-64; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 10593295 - 10593164
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593295 acaaaccctaatttctacccttctcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 10593196  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    |||||||||||||||||||||||||| |||||    
T  10593195 atcaaagaaccctaaaccctagagttccccct 10593164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 25078157 - 25078034
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25078157 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 25078058  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  25078057 atcaaagaaccctaaaccctagag 25078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 25136126 - 25136003
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25136126 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 25136027  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  25136026 atcaaagaaccctaaaccctagag 25136003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 29751291 - 29751418
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  29751291 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactcta 29751390  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  29751391 atcaaagaaccctaaaccctagagttgc 29751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 29720398 - 29720274
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  29720398 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatc 29720299  T
Q  110 aaagaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||||    
T  29720298 aaagaaccctaaaccctagagttgc 29720274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 29722558 - 29722434
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  29722558 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatc 29722459  T
Q  110 aaagaaccctaaaccctagagttgc 134  Q
    |||||||||||||||||||||||||    
T  29722458 aaagaaccctaaaccctagagttgc 29722434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 16544444 - 16544323
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  16544444 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 16544347  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  16544346 atcaaagaaccctaaaccctagag 16544323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 16546666 - 16546545
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  16546666 acaaaccctaatttctacccctttcctaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 16546569  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  16546568 atcaaagaaccctaaaccctagag 16546545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 22536420 - 22536541
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||||||||||    
T  22536420 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tgcagggtgtttcccatgttttcaacccaagagatactcta 22536517  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  22536518 atcaaagaaccctaaaccctagag 22536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 40380127 - 40380006
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||    
T  40380127 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccgagagatactcta 40380030  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  40380029 atcaaagaaccctaaaccctagag 40380006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 40382338 - 40382217
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||    
T  40382338 acaaaccctaacttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccgagagatactcta 40382241  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  40382240 atcaaagaaccctaaaccctagag 40382217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 18441782 - 18441904
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  | ||||||||||  |||||||    
T  18441782 aaccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaat 18441881  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  18441882 caaag-actctaaaccctagagtt 18441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 9789358 - 9789480
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  | ||||||||||  |||||||    
T  9789358 aaccttaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaat 9789457  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  9789458 caaag-actctaaaccctagagtt 9789480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 16409509 - 16409387
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||  |||||||    
T  16409509 aaccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaat 16409410  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  16409409 caaag-actctaaaccctagagtt 16409387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 26177916 - 26177795
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||  |||||||    
T  26177916 aaccctaatttctacccttttcc-aatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaat 26177818  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  26177817 caaag-actctaaaccctagagtt 26177795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 26170804 - 26170686
Alignment:
Q  13 cctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaa 111  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||  || |||||||    
T  26170804 cctaatttctacccttttcc-aatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaa 26170706  T
Q  112 agaaccctaaaccctagagtt 132  Q
    || || |||||||||||||||    
T  26170705 ag-actctaaaccctagagtt 26170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 25412795 - 25412672
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagata 101  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |    
T  25412795 aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-a 25412697  T
Q  102 ctctaatcaaagaaccctaaacccta 127  Q
    |||||||||||| |||||||||||||    
T  25412696 ctctaatcaaag-accctaaacccta 25412672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 13695822 - 13695859
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaa 44  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  13695822 acaaaccctaatttgtacccttttcccaatctctccaa 13695859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 36074218 - 36074309
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||||||||||| ||||||    
T  36074218 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgc 36074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 213500 - 213465
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  213500 aaccctaatttctacccattttcccaatctcaccaa 213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 533804 - 533769
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  533804 aaccctaatttctacccattttcccaatctcaccaa 533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 5058082 - 5058047
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5058082 aaccctaatttctacccattttcccaatctcaccaa 5058047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 28750788 - 28750823
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28750788 aaccctaatttctacccattttcccaatctcaccaa 28750823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 40147296 - 40147261
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40147296 aaccctaatttctacccattttcccaatctcaccaa 40147261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 4e-64; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 54635162 - 54635035
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54635162 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 54635063  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  54635062 atcaaagaaccctaaaccctagagttgc 54635035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 6716537 - 6716412
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6716537 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 6716438  T
Q  107 atcaaagaaccctaaaccctagagtt 132  Q
    ||||||||||||||||||||||||||    
T  6716437 atcaaagaaccctaaaccctagagtt 6716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 9e-62
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 45283020 - 45282893
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  45283020 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttgcaaggtgtttcccatgttttcaacccaagagatactcta 45282921  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  45282920 atcaaagaaccctaaaccctagagttgc 45282893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 3e-61
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 6718718 - 6718596
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6718718 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 6718619  T
Q  110 aaagaaccctaaaccctagagtt 132  Q
    |||||||||||||||||||||||    
T  6718618 aaagaaccctaaaccctagagtt 6718596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 3617486 - 3617363
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3617486 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 3617387  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  3617386 atcaaagaaccctaaaccctagag 3617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 4600877 - 4600998
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  4600877 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 4600974  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  4600975 atcaaagaaccctaaaccctagag 4600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 25637463 - 25637342
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  25637463 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 25637366  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  25637365 atcaaagaaccctaaaccctagag 25637342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 4598656 - 4598777
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||    
T  4598656 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acagggtgtttcccatgttttcaacccaagagatactcta 4598753  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  4598754 atcaaagaaccctaaaccctagag 4598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10209210 - 10209089
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10209210 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10209113  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  10209112 atcaaagaaccctaaaccctagag 10209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10211430 - 10211309
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10211430 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10211333  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  10211332 atcaaagaaccctaaaccctagag 10211309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10056254 - 10056133
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10056254 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10056157  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10056156 atcaaagaaccctaaactctagag 10056133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10058476 - 10058355
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10058476 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10058379  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10058378 atcaaagaaccctaaactctagag 10058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10060698 - 10060577
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10060698 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10060601  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10060600 atcaaagaaccctaaactctagag 10060577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10062920 - 10062799
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10062920 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10062823  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10062822 atcaaagaaccctaaactctagag 10062799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10065142 - 10065021
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10065142 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10065045  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10065044 atcaaagaaccctaaactctagag 10065021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 10067364 - 10067243
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10067364 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 10067267  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||| ||||||    
T  10067266 atcaaagaaccctaaactctagag 10067243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 801125 - 801003
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||    
T  801125 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaat 801026  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  801025 caaag-actctaaaccctagagtt 801003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 7780137 - 7780208
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttccca 81  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||    
T  7780137 aaccctaatttctacccttttcccaatctcacgaagacactcaatgattttctctcttcaaggtgtttccca 7780208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 45095198 - 45095067
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagata 101  Q
    |||||||||||||||| ||||||||||||||||||       |||||||||||||| || ||   |||||||||| | |||||| | | ||||||||| |    
T  45095198 aaccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-a 45095100  T
Q  102 ctctaatcaaagaaccctaaaccctagagttgcc 135  Q
    ||||||||||||| |||||||||||| |||||||    
T  45095099 ctctaatcaaaga-ccctaaaccctaaagttgcc 45095067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 23198111 - 23198203
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | |||||| | | ||||||||| ||||||||||||| ||||||||||||||||||||    
T  23198111 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaag-accctaaaccctagagttgc 23198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 23200310 - 23200402
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttttcta-cccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | |||||| | | ||||||||| ||||||||||||| ||||||||||||||||||||    
T  23200310 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaag-accctaaaccctagagttgc 23200402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 5260456 - 5260589
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcacca-------agacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    |||||||||||||||||||||  |||||||||||||       ||||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||    
T  5260456 aaccctaatttctacccttttttcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga 5260555  T
Q  100 tactctaatcaaagaaccctaaaccctagagttgcc 135  Q
     ||||||||||||| ||||||||||||| |||||||    
T  5260556 -actctaatcaaag-accctaaaccctaaagttgcc 5260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 5258277 - 5258407
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    |||||||||||||||||||||  ||||||||||||||       |||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||    
T  5258277 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga 5258376  T
Q  100 tactctaatcaaagaaccctaaaccctagagtt 132  Q
     ||||||||||||| ||||||||||||| ||||    
T  5258377 -actctaatcaaag-accctaaaccctaaagtt 5258407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 9636259 - 9636390
Alignment:
Q  10 aaccctaatttctacccttttc--ccaatctcacca-------agacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    ||||||||||||||||||||||  ||||||||||||       ||||||||||||||| || ||   |||||||||| | || |||  | ||||||||||    
T  9636259 aaccctaatttctacccttttctcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatatttcccaacccaagaga 9636358  T
Q  100 tactctaatcaaagaaccctaaaccctagagtt 132  Q
     ||||||||||||| ||||||||||||| ||||    
T  9636359 gactctaatcaaag-accctaaaccctaaagtt 9636390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 29196517 - 29196555
Alignment:
Q  7 acaaaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29196517 acaaaccctaatttctacccattttcccaatctcaccaa 29196555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4569987 - 4569952
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4569987 aaccctaatttctacccattttcccaatctcaccaa 4569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 5236589 - 5236624
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5236589 aaccctaatttctacccattttcccaatctcaccaa 5236624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 34491247 - 34491212
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34491247 aaccctaatttctacccattttcccaatctcaccaa 34491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 37408493 - 37408458
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37408493 aaccctaatttctaccctttttcccaatctcaccaa 37408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 40734533 - 40734498
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40734533 aaccctaatttctacccattttcccaatctcaccaa 40734498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 41819656 - 41819691
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  41819656 aaccctaatttctacccattttcccaatctcaccaa 41819691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 43401935 - 43401970
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  43401935 aaccctaatttctacccattttcccaatctcaccaa 43401970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 44700611 - 44700646
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44700611 aaccctaatttctacccattttcccaatctcaccaa 44700646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 1e-60; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 3439541 - 3439416
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  3439541 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctttacaaggtgtttcccatgttttcaacccaagagatactcta 3439442  T
Q  107 atcaaagaaccctaaaccctagagtt 132  Q
    ||||||||||||||||||||||||||    
T  3439441 atcaaagaaccctaaaccctagagtt 3439416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 25689992 - 25689869
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25689992 acaaaccctaatttctacctttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 25689893  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  25689892 atcaaagaaccctaaaccctagag 25689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 15290559 - 15290438
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  15290559 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 15290462  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  15290461 atcaaagaaccctaaaccctagag 15290438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 15470928 - 15470807
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  15470928 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 15470831  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  15470830 atcaaagaaccctaaaccctagag 15470807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 42575457 - 42575578
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  42575457 acaatccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactcta 42575554  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  42575555 atcaaagaaccctaaaccctagag 42575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 2627769 - 2627647
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaat 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||    
T  2627769 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaat 2627670  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  2627669 caaag-actctaaaccctagagtt 2627647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 34254464 - 34254594
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatac 102  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||| | | |||||||||| ||    
T  34254464 aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtctccaacccaagaga-ac 34254562  T
Q  103 tctaatcaaagaaccctaaaccctagagttgcc 135  Q
    ||||||||||| ||||||||||||| |||||||    
T  34254563 tctaatcaaag-accctaaaccctaaagttgcc 34254594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 34256640 - 34256770
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatac 102  Q
    |||||||||||||||| |||| |||||||||||||       |||||||||||||| || |    |||||||||| | |||||| | |||||||| | ||    
T  34256640 aaccctaatttctaccatttttccaatctcaccaatgaacaagacactcaatgattttcacacaccaaggtgtttacaatgtttccaacccaagata-ac 34256738  T
Q  103 tctaatcaaagaaccctaaaccctagagttgcc 135  Q
    ||||||||||| ||||||||||||| |||||||    
T  34256739 tctaatcaaag-accctaaaccctaaagttgcc 34256770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 8965822 - 8965859
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaa 44  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8965822 acaaaccctaatttctacctttttcccaatctcaccaa 8965859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 17982688 - 17982556
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    |||||||||||||||||||||  ||||||||||||||       |||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||    
T  17982688 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga 17982589  T
Q  100 tactctaatcaaagaaccctaaaccctagagttgc 134  Q
     ||||||||||||| ||||||||||||| ||||||    
T  17982588 -actctaatcaaag-accctaaaccctaaagttgc 17982556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 31218251 - 31218160
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||||||||||| ||||||    
T  31218251 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgc 31218160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 44303848 - 44303758
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttg 133  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||||||||||| |||||    
T  44303848 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttg 44303758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4283559 - 4283524
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4283559 aaccctaatttctacccattttcccaatctcaccaa 4283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4731693 - 4731658
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4731693 aaccctaatttctacccattttcccaatctcaccaa 4731658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 8153799 - 8153764
Alignment:
Q  9 aaaccctaatttctacccttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||| ||||||||||||    
T  8153799 aaaccctaatttctaccattttctcaatctcaccaa 8153764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 9765780 - 9765745
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9765780 aaccctaatttctacccattttcccaatctcaccaa 9765745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 15212821 - 15212786
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15212821 aaccctaatttctacccattttcccaatctcaccaa 15212786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 27811313 - 27811278
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27811313 aaccctaatttctacccattttcccaatctcaccaa 27811278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 43036458 - 43036423
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  43036458 aaccctaatttctacccattttcccaatctcaccaa 43036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 2e-59; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 7122719 - 7122596
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7122719 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 7122620  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  7122619 atcaaagaaccctaaaccctagag 7122596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 7124938 - 7124815
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7124938 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 7124839  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  7124838 atcaaagaaccctaaaccctagag 7124815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 8395640 - 8395519
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  8395640 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 8395543  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  8395542 atcaaagaaccctaaaccctagag 8395519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 8393431 - 8393310
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  8393431 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 8393334  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||| ||||||||||||    
T  8393333 atcaaagaaccataaaccctagag 8393310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 5138325 - 5138204
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||    
T  5138325 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtatttcccatgttttcaacccaagagatactcta 5138228  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  5138227 atcaaagaaccctaaaccctagag 5138204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 5136100 - 5135978
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatg-ttttctacccaagagatactct 105  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||| ||||||||||||||||    
T  5136100 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtatttcccatgtttttcaacccaagagatactct 5136003  T
Q  106 aatcaaagaaccctaaaccctagag 130  Q
    |||||||||||||||||||||||||    
T  5136002 aatcaaagaaccctaaaccctagag 5135978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 31495454 - 31495573
Alignment:
Q  13 cctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  ||||||||||    
T  31495454 cctaatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaa 31495553  T
Q  112 agaaccctaaaccctagagtt 132  Q
    || ||  ||||||||||||||    
T  31495554 ag-actataaaccctagagtt 31495573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 13992425 - 13992551
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactcta 106  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||    
T  13992425 aaccctaatttctacccttttttcccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagagactcta 13992524  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||| ||||||||||||| ||||||    
T  13992525 atcaaag-accctaaaccctaaagttgc 13992551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 29999940 - 30000069
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttc-tacccaagagata 101  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||| || ||   |||||||||| | |||||| |  |||||||||| |    
T  29999940 aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaacgattttcactcaccaaggtgtttacaatgtttccaaacccaagaga-a 30000038  T
Q  102 ctctaatcaaagaaccctaaaccctagagttg 133  Q
    |||||||||||| ||||||||||||| |||||    
T  30000039 ctctaatcaaag-accctaaaccctaaagttg 30000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 37229857 - 37229890
Alignment:
Q  11 accctaatttctacccttttcccaatctcaccaa 44  Q
    ||||||||||||||| ||||||||||||||||||    
T  37229857 accctaatttctaccattttcccaatctcaccaa 37229890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 9927591 - 9927626
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9927591 aaccctaatttctacccattttcccaatctcaccaa 9927626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 26364271 - 26364236
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26364271 aaccctaatttctacccattttcccaatctcaccaa 26364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 35369614 - 35369653
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttccca 81  Q
    ||||||||||||||||| || || ||||||||||||||||    
T  35369614 caagacactcaatgattttcactctacaaggtgtttccca 35369653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 52095495 - 52095530
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  52095495 aaccctaatttctacccattttcccaatctcaccaa 52095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 54200039 - 54200074
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  54200039 aaccctaatttctacccattttcccaatctcaccaa 54200074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 54883055 - 54883020
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  54883055 aaccctaatttctacccattttcccaatctcaccaa 54883020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 56178770 - 56178805
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  56178770 aaccctaatttctaccctttttcccaatctcaccaa 56178805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 2e-59; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 6266728 - 6266601
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  6266728 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactcta 6266629  T
Q  107 atcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||||||||||||||    
T  6266628 atcaaagaaccctaaaccctagagttgc 6266601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 12647518 - 12647639
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  12647518 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 12647615  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  12647616 atcaaagaaccctaaaccctagag 12647639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 32289598 - 32289477
Alignment:
Q  10 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttc-tacccaagagatactctaat 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||   |||||||||| |||||||| |  ||||||||||  |||||||    
T  32289598 aaccctaatttctacccttttcc-aatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaat 32289500  T
Q  109 caaagaaccctaaaccctagagtt 132  Q
    ||||| || |||||||||||||||    
T  32289499 caaag-actctaaaccctagagtt 32289477  T

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Target: chr2; HSP #4
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 13656163 - 13656220
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13656163 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct 13656220  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 36205797 - 36205928
Alignment:
Q  10 aaccctaatttctaccctttt-cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    |||||||||||||||| |||| ||||||||||||||       |||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||     
T  36205797 aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga- 36205895  T
Q  101 actctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||| ||||||||||||| ||||||    
T  36205896 actctaatcaaag-accctaaaccctaaagttgc 36205928  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 45099790 - 45099658
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagaga 99  Q
    |||||||||||||||||||||  ||||||||||||||       |||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||    
T  45099790 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga 45099691  T
Q  100 tactctaatcaaagaaccctaaaccctagagttgc 134  Q
     ||||||||||||| ||||||||||||| ||||||    
T  45099690 -actctaatcaaag-accctaaaccctaaagttgc 45099658  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 5723392 - 5723520
Alignment:
Q  13 cctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactc 104  Q
    ||||||||||||||||||| |||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||    
T  5723392 cctaatttctacccttttctcaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actc 5723490  T
Q  105 taatcaaagaaccctaaaccctagagttgcc 135  Q
    ||||||||| |||| |||||||| |||||||    
T  5723491 taatcaaag-accccaaaccctaaagttgcc 5723520  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 4484464 - 4484594
Alignment:
Q  10 aaccctaatttctacccttttc--ccaatctcaccaag------acactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    ||||||||||||||||||||||  ||||| ||||||||      |||||||||||||  | ||   |||||||||| | ||||||  | ||||||||||     
T  4484464 aaccctaatttctacccttttctcccaatttcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaa 4484563  T
Q  101 actctaatcaaagaaccctaaaccctagagtt 132  Q
     |||||||||||| ||||||||||||||||||    
T  4484564 gctctaatcaaag-accctaaaccctagagtt 4484594  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 4503306 - 4503397
Alignment:
Q  42 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||||| ||||||||||| ||||||    
T  4503306 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaa-cctaaaccctaaagttgc 4503397  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 13121806 - 13121769
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaa 44  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  13121806 acaaaccctaatttctaccattttcccagtctcaccaa 13121769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 29867904 - 29867869
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29867904 aaccctaatttctacccattttcccaatctcaccaa 29867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 30833380 - 30833342
Alignment:
Q  10 aaccctaatttctacccttt--tcccaatctcaccaaga 46  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  30833380 aaccctaatttctacccttttctcccaatctcaccaaga 30833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 38312275 - 38312240
Alignment:
Q  10 aaccctaatttctaccc-ttttcccaatctcaccaa 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38312275 aaccctaatttctacccattttcccaatctcaccaa 38312240  T

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Target: scaffold0137 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 6309 - 6180
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  6309 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 6212  T
Q  107 atcaaagaaccctaaaccctagagttgcccct 138  Q
    ||||||||||||||||||||||||||||||||    
T  6211 atcaaagaaccctaaaccctagagttgcccct 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 105; Significance: 8e-53; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 3858 - 3979
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  3858 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 3955  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  3956 atcaaagaaccctaaaccctagag 3979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 105; Significance: 8e-53; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 2736 - 2857
Alignment:
Q  7 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactcta 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  2736 acaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactcta 2833  T
Q  107 atcaaagaaccctaaaccctagag 130  Q
    ||||||||||||||||||||||||    
T  2834 atcaaagaaccctaaaccctagag 2857  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 434568 - 434436
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctctctttacaaggtgtttcccatgtttt-ctacccaagaga 99  Q
    |||||||||||||||||||||  ||||||||||||||       |||||||||||||| || ||   |||||| ||| ||||||||| | ||||||||||    
T  434568 aaccctaatttctaccctttttccccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtatttaccatgttttccaacccaagaga 434469  T
Q  100 tactctaatcaaagaaccctaaaccctagagttgc 134  Q
     ||||||||||||| ||||||||||||| ||||||    
T  434468 -actctaatcaaag-accctaaaccctaaagttgc 434436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 951 - 820
Alignment:
Q  10 aaccctaatttctaccctttt--cccaatctcaccaaga------cactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    |||||||||||||||||||||  ||||||||||||||||      |||||||||||| || ||   |||||||||| | ||||||  | ||||||||||     
T  951 aaccctaatttctacccttttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga- 853  T
Q  101 actctaatcaaagaaccctaaaccctagagttgc 134  Q
    ||||||||||||| ||||||||||||| ||||||    
T  852 actctaatcaaag-accctaaaccctaaagttgc 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 30; Significance: 0.00000004; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 11295 - 11425
Alignment:
Q  10 aaccctaatttctacccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagat 100  Q
    ||||||||||||||||||||  ||||||||||||      |||||||||||||||||  | ||   |||||||||| | ||||||  | ||||||||||     
T  11295 aaccctaatttctacccttttctcccaatctcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaa 11394  T
Q  101 actctaatcaaagaaccctaaaccctagagtt 132  Q
     |||||||||||| ||| ||||||||||||||    
T  11395 gctctaatcaaag-accataaaccctagagtt 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 8869 - 8907
Alignment:
Q  10 aaccctaatttctacccttt--tcccaatctcaccaaga 46  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  8869 aaccctaatttctacccttttctcccaatctcaccaaga 8907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 22286 - 22247
Alignment:
Q  94 aagagatactctaatcaaagaaccctaaaccctagagttgc 134  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  22286 aagagaaactctaatcaaaga-ccctaaaccctagagttgc 22247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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