View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5853-22 (Length: 135)
Name: Solexa-NF5853-22
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5853-22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 103; Significance: 1e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 38197509 - 38197374
Alignment:
| Q |
1 |
ggaaagcacacactaaaggaaatcttacaagcttatgagcatgcatccggacaagccatcaactatcaaaaatcag-nnnnnnngttcagcaaaaataca |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
38197509 |
ggaaagcacacactaaaggaaatcttacaagcttatgagcatgcatccggacaagccatcaactatcaaaaatcagaaaaaaaaattcagcaaaaataca |
38197410 |
T |
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| Q |
100 |
cctgaggcggacagaatagatgtgaagaatatcctt |
135 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
38197409 |
cctgaggcggacagaatagatgtgaagaatatcctt |
38197374 |
T |
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