View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5853-46 (Length: 88)
Name: Solexa-NF5853-46
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5853-46 |
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| [»] scaffold0065 (1 HSPs) |
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Alignment Details
Target: scaffold0065 (Bit Score: 71; Significance: 9e-33; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 71; E-Value: 9e-33
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 10929 - 11007
Alignment:
| Q |
8 |
gagcctaccctgcacgcttcacaagtgcacacacaaggtataatacatgcaggataggcccaacgcagtctcttactcc |
86 |
Q |
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| T |
10929 |
gagcctaccctgcatgcttcacaagtgcacacacaaggtataatacatgcaggatagacccaacgcagtctcttactcc |
11007 |
T |
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