View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5855-42 (Length: 111)
Name: Solexa-NF5855-42
Description: NF5855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5855-42 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 101; Significance: 1e-50; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 1e-50
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 6790298 - 6790194
Alignment:
| Q |
7 |
actattgtgtgggtcaaaatttagcattgattgaaatgaagattgttcttgccatgcttttgcagagatattctttaactgtttcaccaacatatgttca |
106 |
Q |
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| T |
6790298 |
actattgtgtgggtcaaaatttagcattgattgaaatgaagattgttcttgccatgcttttgcagagatattcttttactgtttcaccaacatatgttca |
6790199 |
T |
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| Q |
107 |
tggac |
111 |
Q |
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||||| |
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| T |
6790198 |
tggac |
6790194 |
T |
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