View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5862-17 (Length: 106)
Name: Solexa-NF5862-17
Description: NF5862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5862-17 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 94; Significance: 2e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16300359 - 16300254
Alignment:
| Q |
1 |
gtgactggtggatcaattggagttgatggtggtgagttatagtatccaccacttgatggaggggttgatggtgttgaaggtgttggattatgtgatggtg |
100 |
Q |
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| T |
16300359 |
gtgactggtggatcagttggagttgatggtggtgagttatagtatccaccacttgatggagggtttgatggtgttgaaggtgtttgattatgtgatggtg |
16300260 |
T |
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| Q |
101 |
ttgatg |
106 |
Q |
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|||||| |
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| T |
16300259 |
ttgatg |
16300254 |
T |
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