View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5862-6 (Length: 146)
Name: Solexa-NF5862-6
Description: NF5862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5862-6 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 127; Significance: 6e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 6e-66
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 31078933 - 31078792
Alignment:
| Q |
7 |
atgaacatcacgatgaatattatgattttggcaaatttggtgtgataccaa--acatattctatacaagataatgagtatgttttgacgttggaactttt |
104 |
Q |
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| T |
31078933 |
atgaacatcacgatgaatattatgattttggcaaatttggtgtgataccaattacatattctatacaagataatgagtatgttttgacgttggaaccttt |
31078834 |
T |
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| Q |
105 |
ggaacatatttatgcaacatttacttttatgagaaatgctaa |
146 |
Q |
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| T |
31078833 |
ggaacatatttatgcaacatttacttttatgagaaatgctaa |
31078792 |
T |
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