View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: Solexa-NF5863-32 (Length: 71)
Name: Solexa-NF5863-32
Description: NF5863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5863-32 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 53; Significance: 4e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-22
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4058417 - 4058481
Alignment:
| Q |
7 |
acttattacaagatcaatttaggtgactagttaaggcagaagtaggtgacacaataacttataat |
71 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4058417 |
acttattccaagatcaatttaggtgactagttaaggcagaagcaggtgacacagtaacttataat |
4058481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University