View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5863-37 (Length: 46)
Name: Solexa-NF5863-37
Description: NF5863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5863-37 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 39; Significance: 0.00000000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 21773151 - 21773189
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatc |
46 |
Q |
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| T |
21773151 |
aaaaggtcaagatgatgacataccggaacatacaagatc |
21773189 |
T |
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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 21786679 - 21786717
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatc |
46 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
21786679 |
aaaaggtcaagatgatgacataccggaacatacaagatc |
21786717 |
T |
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