View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5864-1 (Length: 142)

Name: Solexa-NF5864-1
Description: NF5864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5864-1
Solexa-NF5864-1
[»] scaffold0111 (2 HSPs)
scaffold0111 (1-141)||(13227-13367)
scaffold0111 (1-141)||(19494-19634)
[»] chr1 (29 HSPs)
chr1 (3-141)||(21046742-21046880)
chr1 (1-141)||(4596538-4596678)
chr1 (5-141)||(42912273-42912409)
chr1 (3-141)||(16059007-16059145)
chr1 (1-141)||(20587897-20588038)
chr1 (1-141)||(20592435-20592576)
chr1 (1-141)||(20634328-20634468)
chr1 (1-124)||(19675970-19676093)
chr1 (25-141)||(41227397-41227513)
chr1 (1-97)||(42696936-42697031)
chr1 (1-104)||(18275131-18275233)
chr1 (1-85)||(1642656-1642738)
chr1 (2-141)||(14238305-14238441)
chr1 (1-140)||(38887821-38887957)
chr1 (5-141)||(7052748-7052881)
chr1 (29-104)||(52983387-52983463)
chr1 (3-104)||(51476194-51476294)
chr1 (29-104)||(7792586-7792662)
chr1 (29-104)||(13528528-13528604)
chr1 (1-104)||(18270477-18270579)
chr1 (41-104)||(44822855-44822919)
chr1 (29-86)||(10813275-10813333)
chr1 (29-86)||(21181077-21181135)
chr1 (1-97)||(38057394-38057489)
chr1 (41-104)||(24815586-24815647)
chr1 (29-68)||(19761998-19762037)
chr1 (64-141)||(51082500-51082575)
chr1 (45-104)||(13302045-13302104)
chr1 (41-104)||(18823860-18823924)
[»] chr2 (22 HSPs)
chr2 (1-142)||(28653194-28653335)
chr2 (1-141)||(17306706-17306846)
chr2 (2-141)||(27485163-27485302)
chr2 (1-141)||(9975147-9975287)
chr2 (1-141)||(24515405-24515545)
chr2 (3-123)||(19358152-19358272)
chr2 (1-141)||(23969316-23969456)
chr2 (1-133)||(36839393-36839525)
chr2 (25-141)||(24781533-24781649)
chr2 (42-141)||(5031823-5031922)
chr2 (32-104)||(14693456-14693528)
chr2 (37-97)||(5985336-5985396)
chr2 (1-122)||(10897503-10897624)
chr2 (41-104)||(31520371-31520435)
chr2 (29-134)||(44071733-44071837)
chr2 (29-104)||(6478034-6478110)
chr2 (45-123)||(18391046-18391124)
chr2 (29-140)||(3538981-3539091)
chr2 (45-104)||(27851836-27851895)
chr2 (45-104)||(27860542-27860601)
chr2 (29-68)||(18389070-18389109)
chr2 (29-68)||(25045245-25045284)
[»] chr7 (39 HSPs)
chr7 (1-141)||(20585575-20585715)
chr7 (1-141)||(19282311-19282451)
chr7 (1-139)||(46386782-46386920)
chr7 (5-141)||(44374169-44374305)
chr7 (5-141)||(44383034-44383170)
chr7 (25-141)||(12127857-12127973)
chr7 (1-141)||(12465953-12466093)
chr7 (3-123)||(37785076-37785196)
chr7 (1-111)||(18875648-18875758)
chr7 (25-141)||(11066711-11066827)
chr7 (25-141)||(13148165-13148281)
chr7 (1-111)||(43277548-43277658)
chr7 (11-111)||(3287145-3287245)
chr7 (32-141)||(32434283-32434392)
chr7 (25-133)||(12371521-12371629)
chr7 (1-104)||(15281478-15281579)
chr7 (33-123)||(11053876-11053966)
chr7 (2-104)||(3289556-3289657)
chr7 (1-124)||(33001176-33001296)
chr7 (3-68)||(17130514-17130578)
chr7 (29-104)||(8757130-8757206)
chr7 (29-104)||(40555477-40555553)
chr7 (29-103)||(21735237-21735312)
chr7 (41-104)||(4325310-4325374)
chr7 (29-104)||(13408014-13408090)
chr7 (29-104)||(13865120-13865196)
chr7 (2-104)||(832757-832858)
chr7 (2-104)||(1197937-1198038)
chr7 (19-85)||(14161683-14161748)
chr7 (29-140)||(15096385-15096495)
chr7 (29-68)||(10660032-10660071)
chr7 (29-68)||(17071060-17071099)
chr7 (1-68)||(36705441-36705506)
chr7 (41-86)||(11309537-11309583)
chr7 (41-102)||(12755442-12755504)
chr7 (41-86)||(14191841-14191887)
chr7 (63-141)||(14929025-14929101)
chr7 (63-141)||(15352491-15352567)
chr7 (29-140)||(19558025-19558135)
[»] chr3 (49 HSPs)
chr3 (1-141)||(35065273-35065413)
chr3 (1-141)||(41173064-41173204)
chr3 (1-141)||(5206347-5206487)
chr3 (5-133)||(14508074-14508202)
chr3 (5-141)||(17693291-17693427)
chr3 (1-141)||(11258686-11258826)
chr3 (25-141)||(22307276-22307392)
chr3 (13-141)||(44273705-44273833)
chr3 (19-141)||(2842155-2842277)
chr3 (3-141)||(15932200-15932338)
chr3 (2-141)||(35353819-35353958)
chr3 (2-111)||(14153193-14153302)
chr3 (2-123)||(16728503-16728624)
chr3 (1-141)||(17519566-17519706)
chr3 (1-141)||(17534428-17534568)
chr3 (25-141)||(17538350-17538466)
chr3 (25-141)||(40807239-40807355)
chr3 (2-128)||(19884229-19884355)
chr3 (1-123)||(45531332-45531454)
chr3 (1-107)||(50348833-50348936)
chr3 (1-76)||(5215084-5215159)
chr3 (1-68)||(10562922-10562989)
chr3 (1-123)||(20417294-20417414)
chr3 (29-104)||(3394736-3394812)
chr3 (1-104)||(13523145-13523247)
chr3 (1-104)||(23395794-23395896)
chr3 (29-105)||(10550510-10550587)
chr3 (1-104)||(13520515-13520617)
chr3 (41-104)||(14818278-14818342)
chr3 (45-123)||(13179399-13179477)
chr3 (42-141)||(42353366-42353463)
chr3 (45-104)||(6819367-6819427)
chr3 (29-104)||(17548285-17548361)
chr3 (41-104)||(18367492-18367556)
chr3 (44-123)||(52213193-52213272)
chr3 (46-140)||(13519549-13519641)
chr3 (29-97)||(6158637-6158706)
chr3 (29-97)||(14642293-14642362)
chr3 (29-104)||(179441-179517)
chr3 (29-104)||(52338699-52338775)
chr3 (29-68)||(42324994-42325033)
chr3 (2-68)||(3803096-3803160)
chr3 (2-68)||(11850414-11850478)
chr3 (30-68)||(12275841-12275879)
chr3 (29-97)||(37038058-37038127)
chr3 (29-68)||(12512591-12512630)
chr3 (53-104)||(16050114-16050164)
chr3 (45-104)||(16059489-16059547)
chr3 (29-68)||(54520723-54520762)
[»] scaffold1662 (1 HSPs)
scaffold1662 (1-141)||(114-254)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-141)||(5406-5546)
[»] chr6 (23 HSPs)
chr6 (1-141)||(15891396-15891536)
chr6 (2-141)||(27126170-27126309)
chr6 (1-141)||(31733927-31734067)
chr6 (1-141)||(17318815-17318955)
chr6 (25-141)||(18708743-18708858)
chr6 (25-141)||(23150959-23151075)
chr6 (44-141)||(7827234-7827331)
chr6 (1-123)||(24441141-24441261)
chr6 (1-104)||(31735657-31735760)
chr6 (25-80)||(27322172-27322227)
chr6 (1-104)||(13751088-13751190)
chr6 (29-104)||(18658448-18658524)
chr6 (1-123)||(22212224-22212345)
chr6 (75-140)||(27318249-27318314)
chr6 (29-104)||(610982-611058)
chr6 (29-104)||(19444016-19444092)
chr6 (29-104)||(29848239-29848315)
chr6 (1-49)||(7825865-7825913)
chr6 (29-104)||(16133406-16133482)
chr6 (29-86)||(13764592-13764650)
chr6 (2-68)||(5110534-5110598)
chr6 (29-97)||(19829695-19829764)
chr6 (50-140)||(23497613-23497702)
[»] chr4 (27 HSPs)
chr4 (2-141)||(42875019-42875158)
chr4 (2-141)||(14548846-14548985)
chr4 (1-136)||(16997746-16997881)
chr4 (3-141)||(25090874-25091012)
chr4 (1-111)||(37018817-37018927)
chr4 (1-137)||(11425173-11425310)
chr4 (5-141)||(10357129-10357265)
chr4 (1-111)||(19435500-19435610)
chr4 (25-141)||(19609567-19609683)
chr4 (1-142)||(33243948-33244088)
chr4 (2-141)||(3485134-3485270)
chr4 (3-104)||(21061743-21061844)
chr4 (29-123)||(4615782-4615876)
chr4 (2-104)||(2584945-2585046)
chr4 (29-104)||(14933175-14933251)
chr4 (1-104)||(15448145-15448247)
chr4 (29-104)||(27027977-27028053)
chr4 (2-104)||(6511791-6511892)
chr4 (29-104)||(14942381-14942457)
chr4 (8-103)||(18229880-18229974)
chr4 (2-104)||(13446669-13446770)
chr4 (3-104)||(20899494-20899594)
chr4 (29-97)||(9638247-9638316)
chr4 (2-77)||(19734514-19734589)
chr4 (50-140)||(9638080-9638169)
chr4 (2-68)||(49547996-49548060)
chr4 (29-68)||(51992763-51992802)
[»] scaffold1817 (1 HSPs)
scaffold1817 (3-141)||(90-228)
[»] scaffold0064 (1 HSPs)
scaffold0064 (3-141)||(57969-58107)
[»] chr8 (25 HSPs)
chr8 (5-141)||(20179214-20179350)
chr8 (3-141)||(42818600-42818738)
chr8 (25-141)||(39936703-39936819)
chr8 (25-141)||(19140008-19140124)
chr8 (1-97)||(22259106-22259202)
chr8 (1-104)||(17907703-17907806)
chr8 (1-104)||(17217803-17217905)
chr8 (2-71)||(24713388-24713457)
chr8 (1-104)||(23947415-23947517)
chr8 (1-104)||(22244618-22244721)
chr8 (1-140)||(20084331-20084466)
chr8 (3-123)||(23888942-23889060)
chr8 (1-104)||(22584469-22584571)
chr8 (1-68)||(42266365-42266431)
chr8 (29-86)||(19882207-19882265)
chr8 (29-86)||(20454481-20454539)
chr8 (29-86)||(20455238-20455296)
chr8 (29-86)||(20460216-20460274)
chr8 (48-141)||(6102445-6102536)
chr8 (41-104)||(15635914-15635978)
chr8 (1-68)||(19699281-19699347)
chr8 (1-68)||(39695301-39695366)
chr8 (40-140)||(36728025-36728124)
chr8 (29-140)||(22318655-22318765)
chr8 (29-68)||(25849219-25849258)
[»] scaffold0632 (1 HSPs)
scaffold0632 (3-141)||(386-524)
[»] chr5 (14 HSPs)
chr5 (1-141)||(19920853-19920993)
chr5 (3-97)||(25250632-25250725)
chr5 (3-97)||(25314417-25314510)
chr5 (5-97)||(23200299-23200389)
chr5 (32-140)||(32608058-32608164)
chr5 (1-79)||(21406443-21406520)
chr5 (2-101)||(8952787-8952885)
chr5 (29-104)||(24277340-24277416)
chr5 (29-104)||(24384797-24384873)
chr5 (29-86)||(17812638-17812696)
chr5 (50-104)||(22357692-22357747)
chr5 (2-140)||(36509510-36509645)
chr5 (2-68)||(41876320-41876384)
chr5 (1-68)||(10953188-10953253)
[»] scaffold0384 (1 HSPs)
scaffold0384 (25-141)||(8078-8195)
[»] scaffold0375 (1 HSPs)
scaffold0375 (31-141)||(8996-9106)
[»] scaffold0509 (1 HSPs)
scaffold0509 (25-133)||(9459-9567)
[»] scaffold0134 (1 HSPs)
scaffold0134 (25-141)||(9919-10035)
[»] scaffold0042 (2 HSPs)
scaffold0042 (3-123)||(47280-47399)
scaffold0042 (1-97)||(28494-28589)
[»] scaffold0146 (2 HSPs)
scaffold0146 (4-97)||(23618-23711)
scaffold0146 (44-141)||(22322-22417)
[»] scaffold0083 (3 HSPs)
scaffold0083 (1-124)||(652-772)
scaffold0083 (1-124)||(5956-6076)
scaffold0083 (1-97)||(11448-11543)
[»] scaffold0181 (1 HSPs)
scaffold0181 (29-123)||(34107-34201)
[»] scaffold0409 (2 HSPs)
scaffold0409 (3-122)||(444-562)
scaffold0409 (3-122)||(8699-8817)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-141)||(33573-33709)
[»] scaffold0309 (2 HSPs)
scaffold0309 (1-105)||(6122-6225)
scaffold0309 (1-105)||(8274-8377)
[»] scaffold0439 (1 HSPs)
scaffold0439 (5-140)||(11386-11518)
[»] scaffold0207 (1 HSPs)
scaffold0207 (2-141)||(15202-15338)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-141)||(145960-146092)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-104)||(127152-127253)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-105)||(5040-5143)
[»] scaffold2046 (1 HSPs)
scaffold2046 (1-104)||(326-428)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-104)||(3251-3353)
[»] scaffold0273 (1 HSPs)
scaffold0273 (29-104)||(6862-6938)
[»] scaffold0546 (2 HSPs)
scaffold0546 (2-141)||(7198-7334)
scaffold0546 (2-141)||(11018-11154)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-123)||(10892-11012)
[»] scaffold0109 (2 HSPs)
scaffold0109 (2-141)||(5973-6109)
scaffold0109 (2-141)||(670-806)
[»] scaffold0074 (1 HSPs)
scaffold0074 (19-85)||(765-830)
[»] scaffold0070 (1 HSPs)
scaffold0070 (41-104)||(8311-8375)
[»] scaffold0123 (1 HSPs)
scaffold0123 (29-103)||(2013-2088)
[»] scaffold0002 (1 HSPs)
scaffold0002 (45-123)||(127511-127589)
[»] scaffold0004 (1 HSPs)
scaffold0004 (7-104)||(59565-59661)
[»] scaffold0188 (1 HSPs)
scaffold0188 (29-105)||(370-447)
[»] scaffold0117 (1 HSPs)
scaffold0117 (41-105)||(40958-41023)
[»] scaffold0825 (1 HSPs)
scaffold0825 (41-104)||(1549-1613)
[»] scaffold0607 (1 HSPs)
scaffold0607 (41-104)||(2960-3024)
[»] scaffold0429 (1 HSPs)
scaffold0429 (29-104)||(2724-2800)
[»] scaffold0126 (1 HSPs)
scaffold0126 (41-104)||(6053-6117)
[»] scaffold1815 (1 HSPs)
scaffold1815 (5-79)||(1242-1315)
[»] scaffold0321 (1 HSPs)
scaffold0321 (2-68)||(775-839)
[»] scaffold0962 (1 HSPs)
scaffold0962 (3-68)||(1300-1363)
[»] scaffold0630 (1 HSPs)
scaffold0630 (29-97)||(8304-8373)
[»] scaffold0149 (1 HSPs)
scaffold0149 (29-97)||(20889-20958)
[»] scaffold0107 (1 HSPs)
scaffold0107 (29-104)||(3120-3196)
[»] scaffold0065 (1 HSPs)
scaffold0065 (29-97)||(53378-53446)
[»] scaffold0047 (1 HSPs)
scaffold0047 (40-136)||(78322-78416)
[»] scaffold1633 (1 HSPs)
scaffold1633 (2-133)||(431-559)
[»] scaffold0220 (3 HSPs)
scaffold0220 (29-68)||(16004-16043)
scaffold0220 (3-68)||(17627-17691)
scaffold0220 (29-68)||(13186-13225)
[»] scaffold0056 (1 HSPs)
scaffold0056 (29-123)||(66253-66346)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-52)||(10695-10745)
[»] scaffold0326 (1 HSPs)
scaffold0326 (2-68)||(143-207)
[»] scaffold0019 (1 HSPs)
scaffold0019 (63-141)||(29441-29517)
[»] scaffold0008 (2 HSPs)
scaffold0008 (29-86)||(12262-12320)
scaffold0008 (40-124)||(136333-136416)
[»] scaffold0328 (1 HSPs)
scaffold0328 (29-97)||(19387-19456)
[»] scaffold0177 (1 HSPs)
scaffold0177 (2-51)||(1700-1749)
[»] scaffold0108 (1 HSPs)
scaffold0108 (29-97)||(5657-5726)
[»] scaffold0445 (1 HSPs)
scaffold0445 (45-104)||(2667-2727)
[»] scaffold1695 (1 HSPs)
scaffold1695 (50-140)||(625-714)
[»] scaffold0028 (1 HSPs)
scaffold0028 (93-128)||(63838-63873)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-68)||(159723-159762)


Alignment Details
Target: scaffold0111 (Bit Score: 125; Significance: 9e-65; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 13367 - 13227
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13367 gcagagacaataacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 13268  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  13267 ataaatatatgtaactcaaattattcaacaacaacattcac 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19634 - 19494
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19634 gcagagacaagaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 19535  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  19534 ataaatatatgtaactcaaattattcaacaacaacattcac 19494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 4e-61; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 21046880 - 21046742
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21046880 agagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 21046781  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | ||||||| |||||||||||||||| ||||||||||||    
T  21046780 agatatatgtaactcaaattattcaacaacaacattcac 21046742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 4596678 - 4596538
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  4596678 gcagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattagtttctatatcataccttttccac 4596579  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||| ||||||    
T  4596578 ataaatatatgtaactcaaattattcaacaacaatattcac 4596538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 42912273 - 42912409
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  42912273 agacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 42912372  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  42912373 atatatgtaactcaaattattcaacaacaacattcac 42912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 16059145 - 16059007
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  16059145 agagacaaacacatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 16059046  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  16059045 aaatatatgtaactcaaattattcaacaacaacattcac 16059007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20587897 - 20588038
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  20587897 gcagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccac 20587996  T
Q  101 ataaatatatgcaactcaaa-ttattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||| |||||||| ||||||||||||    
T  20587997 ataaatatatgtaactcaaatttattcaacaacaacattcac 20588038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20592435 - 20592576
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  20592435 gcagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccac 20592534  T
Q  101 ataaatatatgcaactcaaa-ttattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||| |||||||| ||||||||||||    
T  20592535 ataaatatatgtaactcaaatttattcaacaacaacattcac 20592576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 20634468 - 20634328
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  20634468 gcagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttttatatcatgccttttccac 20634369  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| ||||||||||||| || ||||||||||||    
T  20634368 ataaatatatgtaactcaaattatttaacaacaacattcac 20634328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 19675970 - 19676093
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||    
T  19675970 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcataccttttgcac 19676069  T
Q  101 ataaatatatgcaactcaaattat 124  Q
    ||||||||||| |  |||||||||    
T  19676070 ataaatatatgtatttcaaattat 19676093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 41227513 - 41227397
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||| ||||||||||||    
T  41227513 ttcacaacatagcatcattaatgataacaaattgaatggtataacaacattattttctatatcataccttttccacataattgtatgtaactcaaattat 41227414  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  41227413 tcaacaacaacattcac 41227397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42696936 - 42697031
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  42696936 gcagagacaacaacataaaacaacttg-caacgtagcaacattaataacaacatcttggatgatataacaacattattttctatatcataccttttc 42697031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18275131 - 18275233
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    |||| |||||||||||||| ||||||  |||||||||| | ||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||    
T  18275131 gcagggacaacaacataaa-caacttg-caacatagcaacgttaataataacaacttgaatgatataaacaacaatattttctatatcatacattttcca 18275228  T
Q  100 cataa 104  Q
    |||||    
T  18275229 cataa 18275233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1642656 - 1642738
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctata 85  Q
    ||||||||||||||||||| || ||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  1642656 gcagagacaacaacataaa-catctt-acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctata 1642738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 14238441 - 14238305
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||| | | |||| || ||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||  | | ||||    
T  14238441 cagagacagcaacatacaacaacttga-atcataacaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 14238344  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  14238343 t-aatatatgtatctcaaattattcaacaacaacattcac 14238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38887957 - 38887821
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||| ||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||  | | |||    
T  38887957 gcagaaacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcac 38887860  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    || |||||||| | |||||||||||||| |||||||||||    
T  38887859 at-aatatatgtacctcaaattattcaacaacaacattca 38887821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 7052881 - 7052748
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||  | | ||| | |    
T  7052881 agacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacct-a 7052785  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||| | |||||||||||||| ||||||||||||    
T  7052784 atatatgtatctcaaattattcaacaacaacattcac 7052748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 52983387 - 52983463
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||||    
T  52983387 caacataacaacattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 52983463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 51476194 - 51476294
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccaca 101  Q
    ||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||||||| |||| ||||||  |||| ||||||| |||| |||||||||    
T  51476194 agagagaacaacataaa-caacttg-caacatagcaacattaataataacaacttgaataatataaacaacggtattatctatatcatacattttccaca 51476291  T
Q  102 taa 104  Q
    |||    
T  51476292 taa 51476294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 7792662 - 7792586
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgata-taacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  ||||||||||||||||||||||||| | |||||  |||||||||||| |||| |||||| |||||    
T  7792662 caacatagcaatattaataataacaacttgaatgatatttacaacgatattttctatatcatacattttcctcataa 7792586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 13528604 - 13528528
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||   ||||||||||| |||| ||||||||||||    
T  13528604 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa 13528528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18270477 - 18270579
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaa-cattattttctatattataccttttcca 99  Q
    |||| |||||||||||||| ||||||  ||||||| || | | ||||||||||||| ||||||||||| || || |||||||||||| |||| |||||||    
T  18270477 gcagggacaacaacataaa-caacttg-caacataacaacgtaaataataacaactagaatgatataaaaaacaatattttctatatcatacattttcca 18270574  T
Q  100 cataa 104  Q
    |||||    
T  18270575 cataa 18270579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 44822919 - 44822855
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||| |||||    
T  44822919 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 44822855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 10813333 - 10813275
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  10813333 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 10813275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 21181135 - 21181077
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  21181135 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 21181077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38057489 - 38057394
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    ||||| |||||||||| ||||| |||  |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  38057489 gcagaaacaacaacat-aaacatctt-gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 38057394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 24815647 - 24815586
Alignment:
Q  41 attaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||||  |||  |||||||||||| |||| |||||| |||||    
T  24815647 attaataataacaacttgaatgatata--aacgatattttctatatcatacattttcctcataa 24815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 19762037 - 19761998
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  19762037 caacatagcaacatcaataataacaacttgaatgatataa 19761998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 51082500 - 51082575
Alignment:
Q  64 tataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    |||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  51082500 tataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 51082575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 13302045 - 13302104
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||| ||||||| || ||||||||| ||||  |||||||||||    
T  13302045 ataataacaacttgaatgatatgaacaacaata-tttctatatcatacaatttccacataa 13302104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 18823860 - 18823924
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||| ||||||||||||||||| ||||||   ||||||||||| |||  ||||||||||||    
T  18823860 attaataacaacaacttgaatgatataaacaacgacattttctatatcatatattttccacataa 18823924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 1e-60; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 1e-60
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28653335 - 28653194
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  28653335 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattatctatatcataccttttccac 28653236  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcacg 142  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  28653235 ataaatatatgtaactcaaattattcaacaacaacattcacg 28653194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17306706 - 17306846
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||    
T  17306706 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattttataacaatattattttctatatcataccttttccac 17306805  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  17306806 ataaatatatgtaactcaaattattcaacaacaacattcac 17306846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 27485302 - 27485163
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  27485302 cagagacatcaacatatcacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 27485203  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  27485202 taaatatatgtaactcaaattattcaacaacaacattcac 27485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 9975147 - 9975287
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||    
T  9975147 gcagagacaacaacatacaacaactttacaacatagcatcattaataataacaacttgaatggtataacaacattattttctataccatacattttccac 9975246  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||| ||||||| |||||||||||||||| ||||||||||||    
T  9975247 atatatatatgtaactcaaattattcaacaacaacattcac 9975287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24515405 - 24515545
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  24515405 gcagagacaacaacatacaacaacttcgcaacatagcatcattaatcataacaacttcaatggtataacaacattattttctatatcataccttttccac 24515504  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||| ||||||||||| ||||||||||||    
T  24515505 ataaatatatgtaactgaaattattcaacaacaacattcac 24515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 19358152 - 19358272
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19358152 agagacatcaacatacaacaactttacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 19358251  T
Q  103 aaatatatgcaactcaaatta 123  Q
    ||||||||| |||||||||||    
T  19358252 aaatatatgtaactcaaatta 19358272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23969456 - 23969316
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||| ||| |||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  23969456 gcagatacatcaacatactacaacttcacaacatatcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 23969357  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  23969356 ataaatatatgtaactcaaattattcaacaacaacattcac 23969316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 36839393 - 36839525
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||    
T  36839393 gcagagacaacaacatacgacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacactattttctatatcatacattttccac 36839492  T
Q  101 ataaatatatgcaactcaaattattcaaaaaca 133  Q
    ||||||||||| |||||||||||||||| ||||    
T  36839493 ataaatatatgtaactcaaattattcaacaaca 36839525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 24781649 - 24781533
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  24781649 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttccacataaatatatgtaactcaaattat 24781550  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| || |||||||||    
T  24781549 tcaacaataacattcac 24781533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 5031922 - 5031823
Alignment:
Q  42 ttaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  5031922 ttaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattattcaacaacaacattcac 5031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 14693456 - 14693528
Alignment:
Q  32 catagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||| ||||||| ||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||    
T  14693456 catagcaacattaatcataacaacttgaatgatataacatcaatattttctatatcatacattttccacataa 14693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 5985336 - 5985396
Alignment:
Q  37 catcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  5985336 catcaataataacaacaacttggatgatataacaacattattttctatatcataccttttc 5985396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 10897624 - 10897503
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa-caacattattttctatattataccttttcca 99  Q
    ||||||||||||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||| ||  | |||||| ||||  ||| ||||||||    
T  10897624 gcagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaacatgaatattttgtataacatatcttttcca 10897526  T
Q  100 cataaatatatgcaactcaaatt 122  Q
    |||||||||||| | ||||||||    
T  10897525 cataaatatatgtagctcaaatt 10897503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 31520371 - 31520435
Alignment:
Q  41 attaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||| |||||||   |||||||||||| |||| ||||||||||||    
T  31520371 attaataataacaacttgaatgataataacaatgatattttctatatcatacattttccacataa 31520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 44071733 - 44071837
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattca 127  Q
    ||||||| || || |||||||||||||||||| ||||| ||||||| || ||||||||| ||||  ||||||||| |||||||| | |||||||||| ||    
T  44071733 caacataacaacactaataataacaacttgaacgatatgaacaacaata-tttctatatcatacaatttccacat-aatatatgtatctcaaattatcca 44071830  T
Q  128 aaaacaa 134  Q
    | |||||    
T  44071831 acaacaa 44071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 6478110 - 6478034
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||   ||||||||||| || | ||||||||||||    
T  6478110 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatccattttccacataa 6478034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 18391124 - 18391046
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| |||  |||||||||| |||||||| | |||||||||    
T  18391124 ataataacaacttgaatgatatgaacaacaatatttccgatatcatatattttccacat-aatatatgtagctcaaatta 18391046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 3538981 - 3539091
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattca 127  Q
    ||||||| || ||| || || ||||||||||||||||| ||||||| ||||| |||||| ||||  | | ||||||| |||||| | |||||||||| ||    
T  3538981 caacataacaacatcaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 3539078  T
Q  128 aaaacaacattca 140  Q
    | |||||||||||    
T  3539079 acaacaacattca 3539091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 27851836 - 27851895
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||| ||||||| || ||||||||| ||||  |||||||||||    
T  27851836 ataataacaacttgaatgatatgaacaacaata-tttctatatcatacaatttccacataa 27851895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 27860542 - 27860601
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||| ||||||| || ||||||||| ||||  |||||||||||    
T  27860542 ataataacaacttgaatgatatgaacaacaata-tttctatatcatacaatttccacataa 27860601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 18389109 - 18389070
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| |||  ||||||||||||||||||||||||    
T  18389109 caacatagcaacatcgataataacaacttgaatgatataa 18389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 25045245 - 25045284
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| ||||| |||||||||||||||||||    
T  25045245 caacatagcaacatcaataacaacaacttgaatgatataa 25045284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 5e-60; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 5e-60
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20585575 - 20585715
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  20585575 gcagagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccac 20585674  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  20585675 ataaatatatgtaactcaaattattcaacaacaacattcac 20585715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19282311 - 19282451
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||     
T  19282311 gcagagacaacaacatacaacaacttcacaacatagcatcgttaataataacaacttgaatggtataacaacattattttctatattatatcttttccat 19282410  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  19282411 ataaatatatgtaactcaaattattcaacaacaacattcac 19282451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 46386920 - 46386782
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  46386920 gcagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 46386821  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattc 139  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  46386820 ataaatatatgtaactcaaattattcaacaacaacattc 46386782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 44374169 - 44374305
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  44374169 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 44374268  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||| | |||||||||||||||| ||||||||||||    
T  44374269 atatacgtaactcaaattattcaacaacaacattcac 44374305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 44383034 - 44383170
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  44383034 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 44383133  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||| | |||||||||||||||| ||||||||||||    
T  44383134 atatacgtaactcaaattattcaacaacaacattcac 44383170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 12127973 - 12127857
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  12127973 ttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 12127874  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  12127873 tcaacaacaacattcac 12127857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 12466093 - 12465953
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||| ||||||||    
T  12466093 gcagagacagcaacatacaacaacttaacaacataacatcattaataataacaacttgaatggtataacaacattatttactatatcatacattttccac 12465994  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  12465993 ataaatatatgtaactcaaattattcaacaacaacattcac 12465953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 37785196 - 37785076
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  37785196 agagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 37785097  T
Q  103 aaatatatgcaactcaaatta 123  Q
    ||||||||| |||||||||||    
T  37785096 aaatatatgtaactcaaatta 37785076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18875758 - 18875648
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  18875758 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattgtataacaacattattttctatatcataccttttccac 18875659  T
Q  101 ataaatatatg 111  Q
    |||||||||||    
T  18875658 ataaatatatg 18875648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 11066711 - 11066827
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  11066711 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttccatatcatacattttccacataaatatatgtaactcaaattat 11066810  T
Q  125 tcaaaaacaacattcac 141  Q
    ||||  |||||||||||    
T  11066811 tcaacgacaacattcac 11066827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 13148281 - 13148165
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  13148281 ttcacaacatagcatcattaataataacaacttgaatggtataaaaatattattttctatatcataccttttccgcataaatatatgtaactcaaattat 13148182  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  13148181 tcaacaacaacattcac 13148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43277658 - 43277548
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  43277658 gcagagacagtaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 43277559  T
Q  101 ataaatatatg 111  Q
    |||||||||||    
T  43277558 ataaatatatg 43277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 3287145 - 3287245
Alignment:
Q  11 caacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatat 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3287145 caacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatat 3287244  T
Q  111 g 111  Q
    |    
T  3287245 g 3287245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 32434392 - 32434283
Alignment:
Q  32 catagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaa 131  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||    
T  32434392 cataacatcattaataacaacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtaactcaaattattcaacaa 32434293  T
Q  132 caacattcac 141  Q
    ||| ||||||    
T  32434292 caatattcac 32434283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 12371521 - 12371629
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||| |||||||| |||||||||  ||||||||||||    
T  12371521 ttcacaacatagcatcattaataataacaacttgaatggtataaaaactttattttctatatcatactttttccacgtaaatatatataactcaaattat 12371620  T
Q  125 tcaaaaaca 133  Q
    |||| ||||    
T  12371621 tcaacaaca 12371629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15281478 - 15281579
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||||| ||| |||||||||  |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||    
T  15281478 gcagagacaacaccattaaacaacttg-caacatagcaacatta-taataacaacttggatgatataacaacattattttctatatcatacactttccac 15281575  T
Q  101 ataa 104  Q
    ||||    
T  15281576 ataa 15281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 11053876 - 11053966
Alignment:
Q  33 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||||| |||||||| | |||||||||    
T  11053876 atagcaacattaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagctcaaatta 11053966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 3289657 - 3289556
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa-caacattattttctatattataccttttccac 100  Q
    |||||||||||||||||| ||||||  |||||||||| | | ||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||||||    
T  3289657 cagagacaacaacataaa-caacttg-caacatagcaacgtcaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccac 3289560  T
Q  101 ataa 104  Q
    ||||    
T  3289559 ataa 3289556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 33001176 - 33001296
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||||||||||||  |||||||||| | ||||||| || |||||| |||||| |||||||| ||||||||||| |||| |||| |||    
T  33001176 gcagagacagcaacataaaacaacttg-caacatagcaacgttaataacaataacttggatgatacaacaacataattttctatatcatacatttt-cac 33001273  T
Q  101 ataaatatatgcaactcaaattat 124  Q
    || |||||||| | ||||||||||    
T  33001274 at-aatatatgtatctcaaattat 33001296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 17130578 - 17130514
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||||||||||||||||| ||||||||||  |||||||| |||||||||| |||||||||    
T  17130578 agagacaacaacataaaacaactt-acaacatagccacattaatactaacaacttggatgatataa 17130514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 8757206 - 8757130
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| |||| |||||||    
T  8757206 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacatttttcacataa 8757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 40555553 - 40555477
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||| ||||    
T  40555553 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccatataa 40555477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 21735312 - 21735237
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacata 103  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||  |||||||||| | |||| |||||||||||    
T  21735312 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 21735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 4325310 - 4325374
Alignment:
Q  41 attaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| |||| ||||| ||||||    
T  4325310 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttcaacataa 4325374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 13408014 - 13408090
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||| || |||||  |||||||||||| |||| |||||| |||||    
T  13408014 caacatagcaatattaataataacaacttgaatgataattacaacgatattttctatatcatacattttcctcataa 13408090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 13865196 - 13865120
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  ||||||||||||||||| |||||| ||||||||  |||||||||||| |||| |||||| |||||    
T  13865196 caacatagcaatattaataataacaacttcaatgataataacaacgatattttctatatcatacattttcctcataa 13865120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 832858 - 832757
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||  ||||||  ||||||||||  |||||||||||||||||||||||||| || |||  |||||||| ||| |||| |||||| |    
T  832858 cagagacaacaacataag-caacttg-caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctc 832761  T
Q  101 ataa 104  Q
    ||||    
T  832760 ataa 832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1198038 - 1197937
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||  ||||||  ||||||||||  |||||||||||||||||||||||||| || |||  |||||||| ||| |||| |||||| |    
T  1198038 cagagacaacaacataag-caacttg-caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctc 1197941  T
Q  101 ataa 104  Q
    ||||    
T  1197940 ataa 1197937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 14161748 - 14161683
Alignment:
Q  19 aacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctata 85  Q
    |||||||| |||||||  || ||||||||| |||| |||| ||||||||||||||||||||||||||    
T  14161748 aacaactt-acaacatgacaacattaataacaacatcttggatgatataacaacattattttctata 14161683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 15096495 - 15096385
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattca 127  Q
    ||||||| || |||||| || ||||||||||||||||| ||||||| || ||||||||| ||||  | | ||||| |||||||| | |||||||||| ||    
T  15096495 caacataacaacattaacaacaacaacttgaatgatatgaacaacaata-tttctatatcatacaatattcacat-aatatatgtatctcaaattatcca 15096398  T
Q  128 aaaacaacattca 140  Q
    | |||||||||||    
T  15096397 acaacaacattca 15096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 10660071 - 10660032
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  10660071 caacatagcaacatcaataataacaacttgaatgatataa 10660032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 17071099 - 17071060
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  17071099 caacatagcaacatcaataataacaacttgaatgatataa 17071060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36705506 - 36705441
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||||||||||||||| || |||  |||||||||| ||| || ||||||||||||||||||||||    
T  36705506 gcagagacaacaacataaa-catcttg-caacatagcaacatgaacaataacaacttgaatgatataa 36705441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 11309537 - 11309583
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  11309537 attaataataacaacttgaataatataaacaacaatattttctatat 11309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 12755504 - 12755442
Alignment:
Q  41 attaataataacaacttgaatgatataa-caacattattttctatattataccttttccacat 102  Q
    |||||| |||||||||||||| |||||| ||||  |||||||||||| |||| ||||||||||    
T  12755504 attaatcataacaacttgaattatataaacaacgatattttctatatcatacattttccacat 12755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 14191887 - 14191841
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  14191887 attaataataacaacttgaatgatataaacaacgatattttctatat 14191841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 14929101 - 14929025
Alignment:
Q  63 atataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  14929101 atataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 14929025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 15352567 - 15352491
Alignment:
Q  63 atataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  15352567 atataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 15352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 19558135 - 19558025
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattca 127  Q
    ||||||| || ||| ||||| ||||||||||||||||| ||||||  || ||||||||| ||||  | | ||||| |||||||| | |||||||||| ||    
T  19558135 caacataacaacatcaataacaacaacttgaatgatatgaacaactata-tttctatatcatacaatattcacat-aatatatgtatctcaaattatcca 19558038  T
Q  128 aaaacaacattca 140  Q
    | |||||||||||    
T  19558037 acaacaacattca 19558025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 5e-60; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 5e-60
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 35065413 - 35065273
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  35065413 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatactttttccac 35065314  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  35065313 ataaatatatgtaactcaaattgttcaacaacaacattcac 35065273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 5e-60
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 41173204 - 41173064
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  41173204 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccac 41173105  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  41173104 ataaatatatgtaactcaaattcttcaacaacaacattcac 41173064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 5206487 - 5206347
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  5206487 gcagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 5206388  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  5206387 ataaatatatgtaactcaaattattcaacaacaacattcac 5206347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 14508074 - 14508202
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  14508074 agacaaaaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatataataccttttccacataa 14508173  T
Q  105 atatatgcaactcaaattattcaaaaaca 133  Q
    ||||||| |||||||||||||||| ||||    
T  14508174 atatatgtaactcaaattattcaacaaca 14508202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 17693291 - 17693427
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||    
T  17693291 agacatcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtatatcaacattattttctatatcatacattttccacataa 17693390  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  17693391 atatatgtaactcaaattattcaacaacaacattcac 17693427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11258686 - 11258826
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||| ||| |||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  11258686 gcagaaacatcaacatactacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 11258785  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  11258786 ataaatatatgtaactcaaattattcaacaacaacattcac 11258826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 22307392 - 22307276
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  22307392 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 22307293  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  22307292 tcaacaacaacattcac 22307276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 44273705 - 44273833
Alignment:
Q  13 acataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgc 112  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||     
T  44273705 acatacaacaactccacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgt 44273804  T
Q  113 aactcaaattattcaaaaacaacattcac 141  Q
    |||||||||||||||| ||||||||||||    
T  44273805 aactcaaattattcaacaacaacattcac 44273833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 2842277 - 2842155
Alignment:
Q  19 aacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactca 118  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||    
T  2842277 aacaacttcacaacatagcatcattaataataaaaacttgaatgatataacaacattattttctatatcataccttttccacataaatatgtgtaacaca 2842178  T
Q  119 aattattcaaaaacaacattcac 141  Q
    |||||||||| ||||||||||||    
T  2842177 aattattcaacaacaacattcac 2842155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 15932338 - 15932200
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||    
T  15932338 agagacagcagcatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacaatttccacat 15932239  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||| ||||| |||||||||||||||| ||||||||||||    
T  15932238 aaacatatgtaactcaaattattcaacaacaacattcac 15932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 35353819 - 35353958
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || | ||||||||||||||||||||||  |||| |||||||||    
T  35353819 cagagacaacaacatacaacaacttcacaacatagcataattaataataacaacttaaaaggtataacaacattattttctataacatacattttccaca 35353918  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    |||||||||| |||| ||||||||||| ||||||||||||    
T  35353919 taaatatatgtaactaaaattattcaacaacaacattcac 35353958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 14153302 - 14153193
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14153302 cagagacagtaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccaca 14153203  T
Q  102 taaatatatg 111  Q
    ||||||||||    
T  14153202 taaatatatg 14153193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 16728503 - 16728624
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  16728503 cagagacaacaacatacaacaacttcacaacatatcatcattaataataacaacttgaatggtataacaacattgttttctatatcatacattttccaca 16728602  T
Q  102 taaatatatgcaactcaaatta 123  Q
    |||||||||| |||||||||||    
T  16728603 taaatatatgtaactcaaatta 16728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 17519706 - 17519566
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||| || |||||||||||||||| |||| |||| |||    
T  17519706 gcagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttcac 17519607  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  17519606 ataaatatatgtaactcaaattattcaacaacaacattcac 17519566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 17534568 - 17534428
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||| || |||||||||||||||| |||| |||| |||    
T  17534568 gcagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttcac 17534469  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  17534468 ataaatatatgtaactcaaattattcaacaacaacattcac 17534428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 17538350 - 17538466
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  17538350 ttcacaacatagcttcattaataataacaactttaatggtataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 17538449  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  17538450 tcaacaacaacattcac 17538466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 40807239 - 40807355
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  40807239 ttcacaacatagcatcattaataataataactttaatggtataacaacattattttctatatcatacattttccacataaatatatgtaactcaaattat 40807338  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  40807339 tcaacaacaacattcac 40807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 19884355 - 19884229
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| ||||||| || |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||    
T  19884355 cagagacatcaacatacaacaactccataacataacatcattaataataacaacttgaatggtataaaaacattattttctatatcatacattttccaca 19884256  T
Q  102 taaatatatgcaactcaaattattcaa 128  Q
    |||||||||| ||||||||||||||||    
T  19884255 taaatatatgtaactcaaattattcaa 19884229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 45531454 - 45531332
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||| |||| ||||||||    
T  45531454 gcagagacaataacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattatcttttatatcatacattttccac 45531355  T
Q  101 ataaatatatgcaactcaaatta 123  Q
    ||||||||||| |||||||||||    
T  45531354 ataaatatatgtaactcaaatta 45531332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 50348936 - 50348833
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  50348936 gcagagacagcaacata---caacttcacaacatagcatcattaataataacaacttgaatggtataacaatattattttctatatcataccttttccac 50348840  T
Q  101 ataaata 107  Q
    |||||||    
T  50348839 ataaata 50348833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5215084 - 5215159
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacatta 76  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  5215084 gcagagacaacaacatacaacaatttcacaacatagcatcataaataataacaacttgaatggtataacaacatta 5215159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10562922 - 10562989
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10562922 gcagagataacaacatacaacaacttcacaacatagcatcattaaaaataacaacttgaacgatataa 10562989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20417294 - 20417414
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||| ||||||  ||||||| ||  |||||||||||||||||||||||||| ||||||| ||| || ||||| |||| |||||||    
T  20417294 gcagagacaacaacataaa-caacttg-caacatatcaatattaataataacaacttgaatgatataaacaacaatatcttttatatcatacattttcca 20417391  T
Q  100 cataaatatatgcaactcaaatta 123  Q
    ||| |||||||| | |||||||||    
T  20417392 cat-aatatatgtagctcaaatta 20417414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 3394812 - 3394736
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||||    
T  3394812 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 3394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13523247 - 13523145
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||| ||||||||| ||||||  ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||     
T  13523247 gcagagacagcaacataaa-caacttg-caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcct 13523150  T
Q  100 cataa 104  Q
    |||||    
T  13523149 cataa 13523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23395896 - 23395794
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa-caacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||| ||||||  ||| ||| || | ||||||||||||||| ||||||||||| ||||| |||||||||||| |||| |||||||    
T  23395896 gcagagacaacaacataaa-caacttg-caatataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttcca 23395799  T
Q  100 cataa 104  Q
    |||||    
T  23395798 cataa 23395794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 10550510 - 10550587
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaa 105  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  || ||||||||| |||| |||||||||||||    
T  10550510 caacatagcaatattaataataacaacttgaatgatataaacaacgataatttctatatcatacattttccacataaa 10550587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13520617 - 13520515
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||  ||||||  ||||||||||  |||||||||||||| ||||||||||| ||||||  |||||||||||| |||| ||||||     
T  13520617 gcagagacaacaacataag-caacttg-caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcatacattttcct 13520520  T
Q  100 cataa 104  Q
    |||||    
T  13520519 cataa 13520515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 14818278 - 14818342
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||||    
T  14818278 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 14818342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 13179399 - 13179477
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||| |||| ||||| |||||||| | |||||||||    
T  13179399 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaatta 13179477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 42353463 - 42353366
Alignment:
Q  42 ttaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| ||||| ||| |||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  42353463 ttaataataaccacttggatggtataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 42353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 6819367 - 6819427
Alignment:
Q  45 ataataacaacttgaatgata-taacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||||||||||| |||||||  |||||||||||| |||| ||||||||||||    
T  6819367 ataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 6819427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 17548361 - 17548285
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||  | |||||||||| |||| ||||||||||||    
T  17548361 caacatagcaatattaataacaacaacttgaatgatataaacaacgattttttctatatcatacattttccacataa 17548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 18367556 - 18367492
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||| ||||||  ||||||| |||| |||| ||||||||||||    
T  18367556 attaataataacaacttgaatgatataaacaacgatattttcaatatcatacattttccacataa 18367492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 52213272 - 52213193
Alignment:
Q  44 aataataacaacttgaatgatataa-caacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||| |||| |||||||||| ||||||| ||||| ||||||    
T  52213272 aataataacaatttgaatgatataaacaacgatattttctatataatacattttccacat-aatatatacaacttaaatta 52213193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 13519549 - 13519641
Alignment:
Q  46 taataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||||||| ||||| ||| |||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| |||||||||||    
T  13519549 taataaccacttggatggtataacaacattattt-ctatatcatacgatattcacataa-tatatgtacctcaaattattcaacaacaacattca 13519641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 6158637 - 6158706
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  6158637 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 6158706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 14642362 - 14642293
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  14642362 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 14642293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 179517 - 179441
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  ||||||| |||||||||||||||| ||||||||  |||||||||||| | || |||| |||||||    
T  179517 caacatagcaatattaatagtaacaacttgaatgataataacaacgatattttctatatcaaacattttgcacataa 179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 52338775 - 52338699
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataac-aacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| |||||||||||||||||||  |||   ||||||||||| |||| ||||||||||||    
T  52338775 caacatagcaatattaataacaacaacttgaatgatataaataacgacattttctatatcatacattttccacataa 52338699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 42325033 - 42324994
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  42325033 caacatagcaacatgaataataacaacttgaatgatataa 42324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 3803096 - 3803160
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  3803096 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactcgaatgatataa 3803160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 11850478 - 11850414
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  11850478 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactagaatgatataa 11850414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 12275841 - 12275879
Alignment:
Q  30 aacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  12275841 aacatagcaatattaataataacaacttgaatgatataa 12275879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 37038058 - 37038127
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||| ||||||||||| ||||| | || ||||||||| |||| |||||    
T  37038058 caacatagcaacatcaataataacaatttgaatgatataaacaataataatttctatatcatacattttc 37038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 12512630 - 12512591
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| || ||||||||||||||||||||||    
T  12512630 caacatagcaacatcaacaataacaacttgaatgatataa 12512591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 16050114 - 16050164
Alignment:
Q  53 aacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||| | ||||||||| ||||  |||||||||||    
T  16050114 aacttgaatgatataacaacatca-tttctatatcatacactttccacataa 16050164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 16059489 - 16059547
Alignment:
Q  45 ataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||| |||||||||||| ||||||||| | ||||||||| ||||  |||||||||||    
T  16059489 ataataataacttgaatgatttaacaacatca-tttctatatcatacactttccacataa 16059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 54520723 - 54520762
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| | ||||||||||||||| |||||||||||    
T  54520723 caacatagcaacgttaataataacaactcgaatgatataa 54520762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 254 - 114
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  254 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccac 155  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | || |||||| |||||||||||||||| ||||||||||||    
T  154 aaaattatatgtaactcaaattattcaacaacaacattcac 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 5546 - 5406
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  5546 gcagagacaacaacatacaacaacttcacaacatagcaacattaataataacaacttgaatggtataacaacattattttctatatcatactttttccac 5447  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  5446 ataaatatatgtaactcaaattattcaacaacaacattcac 5406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 1e-57; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 15891536 - 15891396
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||    
T  15891536 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcatacattttccac 15891437  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  15891436 ataaatatatgtaactcaaattattcaacaacaacattcac 15891396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 27126309 - 27126170
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27126309 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 27126210  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||| |||| |||||||||||||||| ||||||||||||    
T  27126209 taaatttatgtaactcaaattattcaacaacaacattcac 27126170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31733927 - 31734067
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||    
T  31733927 gcagagacaacaacatacaacaacttcacaacataacatcattaataataacaacttaaatggtataacaacattattttctatatcatacctttttcac 31734026  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31734027 ataaatatatgtaactcaaattattcaacaacaacattcac 31734067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 8e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 17318955 - 17318815
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  17318955 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 17318856  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||  ||||||||| |||||| ||||| ||||||    
T  17318855 ataaatatatataactcaaataattcaagaacaatattcac 17318815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 18708743 - 18708858
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  18708743 ttcacaacatagcatcattaataataa-aacttgaatggtataacaacattattttctatatcataccttttccacataactatatgtaactcaaattat 18708841  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  18708842 tcaacaacaacattcac 18708858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 23151075 - 23150959
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  23151075 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgtaactcaaattat 23150976  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  23150975 tcaacaacaacattcac 23150959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 7827234 - 7827331
Alignment:
Q  44 aataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  7827234 aataataacaacttgaatggtataacaaaattattttctatatcatacctttttcacataaatatatgtaactcaaattattcaacaacaacattcac 7827331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24441141 - 24441261
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||||  ||||||  ||||||||||  |||||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  24441141 gcagagacaacaacataag-caacttg-caacatagcaatattaataataacaacttgaatggtataacaacattatcttcaatatcataccttttccac 24441238  T
Q  101 ataaatatatgcaactcaaatta 123  Q
    ||||||||||| |||||||||||    
T  24441239 ataaatatatgtaactcaaatta 24441261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31735760 - 31735657
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||| ||||||||||||||||   ||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||| | || |||||||    
T  31735760 gcagagacagcaacataaaacaacttgt-aacatagcaacattaataataacaatttgaatgatataaacaacaatattttctatatcaaacattttcca 31735662  T
Q  100 cataa 104  Q
    |||||    
T  31735661 cataa 31735657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 27322227 - 27322172
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattatttt 80  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  27322227 ttcacaacatagcatcattaataacaacaacttgaatggtataacaacattatttt 27322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13751190 - 13751088
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||  ||||||  ||||||||||  ||||||||||||||||||||||| || ||||||  |||||||||||| |||| |||||||    
T  13751190 gcagagacaacaacataag-caacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttcca 13751093  T
Q  100 cataa 104  Q
    |||||    
T  13751092 cataa 13751088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 18658448 - 18658524
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||||    
T  18658448 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 18658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22212345 - 22212224
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    |||||| || ||||||||||||||||  ||||| | || ||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||  ||| ||    
T  22212345 gcagaggcagcaacataaaacaacttg-caacacaacaacatcaataataacaacttgaatgatataaacaaaattattttctatatcatacaattttca 22212247  T
Q  100 cataaatatatgcaactcaaatta 123  Q
    ||| |||||||| | |||||||||    
T  22212246 cat-aatatatgtatctcaaatta 22212224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 27318314 - 27318249
Alignment:
Q  75 tattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    |||||| ||||| |||| ||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  27318314 tattttatatatcatacattttccacataaatatatgtaacttaaattattcaacaacaacattca 27318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 610982 - 611058
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||| |||||    
T  610982 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 611058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 19444092 - 19444016
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||||    
T  19444092 caacatagcaatattaataacaacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 19444016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 29848315 - 29848239
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||| | || |||||| |||||    
T  29848315 caacatagcaatattaataataacaacttgaatgatataaacaacaatattttctatatcacacattttcctcataa 29848239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7825865 - 7825913
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataat 49  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  7825865 gcagagacagcaacatacaacaacttcacaacataacatcattaataat 7825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 16133482 - 16133406
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||   ||||||||||| |||| ||||||||||||    
T  16133482 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa 16133406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 13764592 - 13764650
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  13764592 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 13764650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 5110598 - 5110534
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  5110598 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactcgaatgatataa 5110534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 19829764 - 19829695
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  19829764 caacatagcaacatcaataatatcaacttgaatgatataaacaataataatttctatatcatacattttc 19829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 23497702 - 23497613
Alignment:
Q  50 aacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||||||||||||||||| ||||||| | |||| ||||| ||||  | | ||||||| |||||| | |||||||||||||| |||||||||||    
T  23497702 aacaacttgaatgatatgaacaacactctttt-tatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattca 23497613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 5e-57; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 5e-57
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 42875019 - 42875158
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  42875019 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatactttttccaca 42875118  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  42875119 taaatatatgtaactcaaattattcaacaacaacattcac 42875158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 14548846 - 14548985
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  14548846 cagagacagcaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 14548945  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    || ||||||| |||||||||||||||| ||||||||||||    
T  14548946 tacatatatgtaactcaaattattcaacaacaacattcac 14548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 1e-54
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 16997746 - 16997881
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  16997746 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccac 16997845  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaaca 136  Q
    ||||||||| | |||||||||||||||| |||||||    
T  16997846 ataaatataagtaactcaaattattcaacaacaaca 16997881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 25090874 - 25091012
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  25090874 agagaaaacaacacacaacaacttcacaacataacatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacat 25090973  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  25090974 aaatatatgtaactcaaattattcaacaacaacattcac 25091012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37018817 - 37018927
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  37018817 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccac 37018916  T
Q  101 ataaatatatg 111  Q
    |||||||||||    
T  37018917 ataaatatatg 37018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 11425173 - 11425310
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacatta-ttttctatattataccttttcca 99  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||| |||||    
T  11425173 gcagagacaacaacatacatcaacttcacaacatagcatcattaataataacaacatgaatgatataacaatattatttttctatatcatacctattcca 11425272  T
Q  100 cataaatatatgcaactcaaattattcaaaaacaacat 137  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  11425273 cataaatatatgtaactcaaattattcaacaacaacat 11425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 10357265 - 10357129
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| || |||    
T  10357265 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttctacgtaa 10357166  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||| |||||||||||||||  ||||||||||||    
T  10357165 atatatgtaactcaaattattcatcaacaacattcac 10357129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 19435610 - 19435500
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||    
T  19435610 gcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattgttttctatatcataccttttccac 19435511  T
Q  101 ataaatatatg 111  Q
    |||||||||||    
T  19435510 ataaatatatg 19435500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 19609567 - 19609683
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||    
T  19609567 ttcacaacatagcatcattaataataacaacttgaatggtttaacaacattattttctatatcatacattttccacataaatatatgtcactcaaattat 19609666  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  19609667 tcaacaacaacattcac 19609683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33244088 - 33243948
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||    
T  33244088 gcagagacatcaacatacaataacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttattcac 33243989  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcacg 142  Q
    |  |||||||| | |||||||||||||| || || |||||||    
T  33243988 a-caatatatgtatctcaaattattcaacaaaaatattcacg 33243948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 3485134 - 3485270
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||||||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||  | | ||||    
T  3485134 cagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 3485231  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  3485232 t-aatatatgtatctcaaattattcaacaacaacattcac 3485270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 21061743 - 21061844
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccaca 101  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||| |||| || |||||||||||| | || |||||||||    
T  21061743 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaacttgaatgatataaacatcaatattttctatatcaaacattttccaca 21061841  T
Q  102 taa 104  Q
    |||    
T  21061842 taa 21061844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 4615876 - 4615782
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||||||| |||||||| |||||||||||    
T  4615876 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatgtaactcaaatta 4615782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 2585046 - 2584945
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa-caacattattttctatattataccttttccac 100  Q
    |||||||| ||||||||| ||||||  ||||||| || | ||||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||||||    
T  2585046 cagagacagcaacataaa-caacttg-caacataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccac 2584949  T
Q  101 ataa 104  Q
    ||||    
T  2584948 ataa 2584945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 14933251 - 14933175
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||  |||||||||||| |||| ||||||||||||    
T  14933251 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctatatcatacattttccacataa 14933175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15448247 - 15448145
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||  ||||||  |||||||| |  ||||||||||| |||||||||||||| ||||||  |||||||||||| |||| |||||||    
T  15448247 gcagagacaacaacataag-caacttg-caacatagaaatattaataataaaaacttgaatgatataaacaacgatattttctatatcatacattttcca 15448150  T
Q  100 cataa 104  Q
    |||||    
T  15448149 cataa 15448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 27027977 - 27028053
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  || ||||||||| |||| ||||||||||||    
T  27027977 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataa 27028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 6511791 - 6511892
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccac 100  Q
    ||||| |||||||||||| |||||| | || |||||| | ||||||||||||||| ||||||||| ||||||| |||||||||||| |||| ||||| ||    
T  6511791 cagaggcaacaacataaa-caacttga-aatatagcaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttctac 6511888  T
Q  101 ataa 104  Q
    ||||    
T  6511889 ataa 6511892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 14942457 - 14942381
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||  ||||||||| || |||| ||||||||||||    
T  14942457 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctagatcatacattttccacataa 14942381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 18229880 - 18229974
Alignment:
Q  8 caacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacata 103  Q
    |||||||||||| ||||||  ||||||||||  ||||||| |||||||||||||||| ||||||||  |||||||||| | |||| |||||||||||    
T  18229880 caacaacataaa-caacttg-caacatagcaatattaatattaacaacttgaatgataataacaacgatattttctatctcatacattttccacata 18229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 13446669 - 13446770
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||  ||||||  |||||||||| | ||||||||||||||| ||||||||| ||||||  |||||||||| | |||| |||| |||    
T  13446669 cagagacaacaacataag-caacttg-caacatagcaacgttaataataacaactcgaatgatataaacaacgatattttctatctcatacatttttcac 13446766  T
Q  101 ataa 104  Q
    ||||    
T  13446767 ataa 13446770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 20899594 - 20899494
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccaca 101  Q
    ||||||||||||||||  ||||||  ||||||| ||  |||||||| ||||||||||||||||| ||||||   ||||||||||| |||| |||||||||    
T  20899594 agagacaacaacataag-caacttg-caacataacaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccaca 20899497  T
Q  102 taa 104  Q
    |||    
T  20899496 taa 20899494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 9638247 - 9638316
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  9638247 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 9638316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 19734514 - 19734589
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaac-ttgaatgatataacaacattat 77  Q
    |||||||||||||||| |||||||| | | ||||||| ||||||||||||| || ||| ||| ||||||||||||||    
T  19734514 cagagacaacaacatacaacaacttga-atcatagcaacattaataataaccactttggatggtataacaacattat 19734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 9638080 - 9638169
Alignment:
Q  50 aacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| |||||||||||    
T  9638080 aacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattca 9638169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 49548060 - 49547996
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  49548060 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactcgaatgatataa 49547996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 51992763 - 51992802
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| || ||||||||||||||||||||||    
T  51992763 caacatagcaacatcaacaataacaacttgaatgatataa 51992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 111; Significance: 2e-56; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 228 - 90
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  228 agagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttaaatggtataacaacattattttctatatcataccttttccacat 129  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  128 aaatatatgtaactcaaattattcaacaacaacattcac 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 111; Significance: 2e-56; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 57969 - 58107
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  57969 agagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 58068  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  58069 aaatatatgtaactcaaattcttcaacaacaacattcac 58107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 3e-55; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 20179350 - 20179214
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20179350 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 20179251  T
Q  105 atatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||| | |||||||||||||||| ||||||||||||    
T  20179250 atatacgtaactcaaattattcaacaacaacattcac 20179214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 42818738 - 42818600
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||| |||    
T  42818738 agagacaacaacatacaacaacttcacaacatatcatcgttaataataaaaacttgaatggtataacaacattattttctatatcatatcttttcctcat 42818639  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  42818638 aaatatatgtaactcaaattattcaacaacaacattcac 42818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 39936819 - 39936703
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  39936819 ttcacaacatagcatcattaataataacaacttgaatggtataaccacattattttctatatcataccttttccacataaatatatgtaactcaaattat 39936720  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  39936719 tcaacaacaacattcac 39936703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 19140008 - 19140124
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  19140008 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtaactcaaattat 19140107  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| || |||||||||    
T  19140108 tcaacaagaacattcac 19140124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22259202 - 22259106
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22259202 gcagagacaacaacatacaacaacttcacaacatggcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttc 22259106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17907806 - 17907703
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||| |||| |||||||    
T  17907806 gcagagacaacaacataaaacaacttg-caacatagcaacattaataatatcaacttgaatgatatgaacaacaatattttctatatcatactttttcca 17907708  T
Q  100 cataa 104  Q
    |||||    
T  17907707 cataa 17907703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17217803 - 17217905
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||    
T  17217803 gcagagacagcaacataaaacaacttg-caacatagcaacattaataataacaacttagatgatataacaacattattttctatatcatacactttccac 17217901  T
Q  101 ataa 104  Q
    ||||    
T  17217902 ataa 17217905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24713388 - 24713457
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaa 71  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  24713388 cagagacagcaacatacaacaacttcacaacataacatcattaataataacaatttgaatgatataacaa 24713457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23947415 - 23947517
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||| | |||||||||||| ||| | ||||||    
T  23947415 gcagagacagcaacataaaacaacttg-caacatagcaacattaataataacaacttgaatgatataaacaataatattttctatatcata-catttcca 23947512  T
Q  100 cataa 104  Q
    |||||    
T  23947513 cataa 23947517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22244618 - 22244721
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||| ||||||||||||||||  |||||||| | ||||||||||||||||||||| ||||| ||||| | |||||||||||| |||| ||||| |    
T  22244618 gcagagacatcaacataaaacaacttg-caacatagaaacattaataataacaacttgaaagatataaacaataatattttctatatcatacattttcaa 22244716  T
Q  100 cataa 104  Q
    |||||    
T  22244717 cataa 22244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20084466 - 20084331
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||||||||||| |||||||| | | |||| || ||||||||||||| ||||| ||| ||||||||||||||||| ||||| ||||  | | |||    
T  20084466 gcagagacaacaacatacaacaacttga-atcataacaacattaataataaccacttg-atggtataacaacattatttt-tatatcatacaatattcac 20084370  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    || |||||||| | |||||||||||||| || ||||||||    
T  20084369 at-aatatatgtacctcaaattattcaacaagaacattca 20084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 23888942 - 23889060
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccaca 101  Q
    ||||||| ||||||||| ||||||  ||||| |||  ||||||||||||||||||||| ||||| ||||||| ||| |||||||| |||| |||||||||    
T  23888942 agagacagcaacataaa-caacttg-caacacagctacattaataataacaacttgaacgatataaacaacaatatcttctatatcatacattttccaca 23889039  T
Q  102 taaatatatgcaactcaaatta 123  Q
    | |||||||| | |||||||||    
T  23889040 t-aatatatgtagctcaaatta 23889060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22584571 - 22584469
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||| ||||||||| ||||||  |||||||||| ||||||||||||| ||||||||||||| ||||||  ||||||| |||| |||| |||| ||    
T  22584571 gcagagacagcaacataaa-caacttg-caacatagcaacattaataataaccacttgaatgatataaacaacgatattttcaatatcatacatttttca 22584474  T
Q  100 cataa 104  Q
    |||||    
T  22584473 cataa 22584469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42266431 - 42266365
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||| |||||||||||||||| |||  |||||||||| |||  ||||||||||||||||||||||||    
T  42266431 gcagaaacaacaacataaaacatcttg-caacatagcaacatcgataataacaacttgaatgatataa 42266365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 19882207 - 19882265
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  19882207 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 19882265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 20454481 - 20454539
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  20454481 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 20454539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 20455238 - 20455296
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  20455238 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 20455296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 20460216 - 20460274
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  20460216 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 20460274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 6102536 - 6102445
Alignment:
Q  48 ataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||| ||||| ||| |||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  6102536 ataaccacttggatggtataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaataacaacattcac 6102445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 15635978 - 15635914
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| | || |||||| |||||    
T  15635978 attaataataacaacttgaatgatataaacaacgatattttctatatcacacattttcctcataa 15635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19699281 - 19699347
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||||||||||||||| |||||| ||| ||||||  |||||||| |||||||||| || ||||||    
T  19699281 gcagagacaacaacataaagcaactt-acatcatagccacattaatactaacaacttggataatataa 19699347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39695366 - 39695301
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||| |||||||||| ||||| |||  |||||||||| ||| |||||||||||||||||||||||||    
T  39695366 gcagaaacaacaacat-aaacatctt-gcaacatagcaacatcaataataacaacttgaatgatataa 39695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 36728124 - 36728025
Alignment:
Q  40 cattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacatt 138  Q
    |||||| || ||||||||||||||||| ||||||| ||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||| |||    
T  36728124 cattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaatatt 36728027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 22318765 - 22318655
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattca 127  Q
    ||||||| || |||||| || ||||||||||||||||| ||||||| || ||||||||| ||||  | ||||| | |||||||| | |||||||||| ||    
T  22318765 caacataacaacattaacaacaacaacttgaatgatatgaacaacaata-tttctatatcatacaatatccacgt-aatatatgtatctcaaattatcca 22318668  T
Q  128 aaaacaacattca 140  Q
    | ||||| |||||    
T  22318667 acaacaatattca 22318655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 25849258 - 25849219
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||| |||| ||| |||||||||||||||||||||||||    
T  25849258 caacacagcaacatcaataataacaacttgaatgatataa 25849219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 99; Significance: 3e-49; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 386 - 524
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||| ||    
T  386 agagacaacaacgtacaacaacttcacaacatatcatcattaataataacaacttgaatggtataaaaacgttattttctatatcataccttttccatat 485  T
Q  103 aaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  486 aaatatatgtaactcaaattattcaacaacaacattcac 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 5e-48; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19920853 - 19920993
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||||| ||||| | ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||  ||||||||    
T  19920853 gcagagacagcaacacacaacaacttcacaacatatcatcattaataataataacttgaatggtataacaacattattttctatatcatagtttttccac 19920952  T
Q  101 ataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  19920953 ataaatatatgtaactcaaattattcaacaacaacattcac 19920993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25250725 - 25250632
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||| ||||| ||| |||||||| |||||||||||||||||| |||| |||||    
T  25250725 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25250632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25314510 - 25314417
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||| ||||| ||| |||||||| |||||||||||||||||| |||| |||||    
T  25314510 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25314417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 23200389 - 23200299
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||| || ||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  23200389 agacaacaacataaa-catctt-acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctataacataccttttc 23200299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 32608164 - 32608058
Alignment:
Q  32 catagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaa 131  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||  | | ||||| |||||||| | || ||||||||||| ||    
T  32608164 catagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctaaaattattcaacaa 32608067  T
Q  132 caacattca 140  Q
    |||||||||    
T  32608066 caacattca 32608058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21406520 - 21406443
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattt 79  Q
    ||||||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||||||    
T  21406520 gcagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacattattt 21406443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 8952885 - 8952787
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||  ||||||  ||||||||||  |||||||| ||||||||||||||||| ||||||   ||||||||||| |||| ||||||||    
T  8952885 cagagacaacaacataag-caacttg-caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccac 8952788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 24277416 - 24277340
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||| |||| |||||| |||||    
T  24277416 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24277340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 24384797 - 24384873
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||| |||| |||||| |||||    
T  24384797 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 17812638 - 17812696
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||    
T  17812638 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatat 17812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 22357747 - 22357692
Alignment:
Q  50 aacaacttgaatgatataa-caacattattttctatattataccttttccacataa 104  Q
    ||||||||||||||||||| |||||  ||||||||||| |||| ||||||||||||    
T  22357747 aacaacttgaatgatataaacaacaacattttctatatcatacattttccacataa 22357692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 36509645 - 36509510
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| |||| || |||||||| | | ||| ||| ||||||||||||  ||||| ||| ||||| ||| |||||| |||||| ||||  | | ||||    
T  36509645 cagagacagcaacgtacaacaacttga-atcatggcaacattaataataatcacttggatggtataataacgttattt-ctatatcatacgatattcaca 36509548  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||| |||||| | |||||||||||||| |||||||||||    
T  36509547 taa-tatatgtacctcaaattattcaacaacaacattca 36509510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 41876384 - 41876320
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  41876384 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactcgaatgatataa 41876320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10953188 - 10953253
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||||||||||||||| || |||  |||||||||| ||| || |||||||||||||||| |||||    
T  10953188 gcagagacaacaacataaa-catcttg-caacatagcaacatcaacaataacaacttgaatggtataa 10953253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 3e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 8195 - 8078
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattatacc-ttttccacataaatatatgcaactcaaatta 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  8195 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacctttttccacataaatatatgtaactcaaatta 8096  T
Q  124 ttcaaaaacaacattcac 141  Q
    ||||| ||||||||||||    
T  8095 ttcaacaacaacattcac 8078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 91; Significance: 2e-44; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 9106 - 8996
Alignment:
Q  31 acatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaa 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| |    
T  9106 acatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacataaatatatgtaactcaatttattcaaca 9007  T
Q  131 acaacattcac 141  Q
    |||||||||||    
T  9006 acaacattcac 8996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 89; Significance: 3e-43; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 9567 - 9459
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  9567 ttcacaacatagcatcattaataataacaacttgaaaggtataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 9468  T
Q  125 tcaaaaaca 133  Q
    |||| ||||    
T  9467 tcaacaaca 9459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 89; Significance: 3e-43; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 10035 - 9919
Alignment:
Q  25 ttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  10035 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgtaactcaaattat 9936  T
Q  125 tcaaaaacaacattcac 141  Q
    |||| ||||||||||||    
T  9935 tcaacaacaacattcac 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 89; Significance: 3e-43; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 47399 - 47280
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacat 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  47399 agagacaacaacatacaacaacttcacaacatagcatcattaattataacaacttgaatggtataacaacatt-ttttctatatcataccttttccacat 47301  T
Q  103 aaatatatgcaactcaaatta 123  Q
    ||||||||| ||| |||||||    
T  47300 aaatatatgtaacccaaatta 47280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28494 - 28589
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||| | ||||||||||||||||  || |||||   ||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||    
T  28494 gcagagatagcaacataaaacaacttg-cagcatagtcacattaataataacaacttgaatgatataacaacattagtttctgtatcatacattttc 28589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 1e-29; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 23618 - 23711
Alignment:
Q  4 gagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| || ||||||||||    
T  23618 gagacaacaacatacaacaatttcacaacatagcatcattaatgataacaacttaaatggtataacaacattattttctacatcataccttttc 23711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 22322 - 22417
Alignment:
Q  44 aataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||| ||||| ||| |||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  22322 aataataaccacttggatggtataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 22417  T

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Target: scaffold0083 (Bit Score: 60; Significance: 6e-26; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 772 - 652
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||| | ||||||||||||||||| |||||||||| | |||||||  |||||||| ||||||||||||||||||||||||||| ||||||||| |||    
T  772 gcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcatacctttt-cac 675  T
Q  101 ataaatatatgcaactcaaattat 124  Q
    || |||||||| | ||||||||||    
T  674 at-aatatatgtatctcaaattat 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6076 - 5956
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    ||||||| | ||||||||||||||||| |||||||||| | |||||||  |||||||| ||||||||||||||||||||||||||| ||||||||| |||    
T  6076 gcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcatacctttt-cac 5979  T
Q  101 ataaatatatgcaactcaaattat 124  Q
    || |||||||| | ||||||||||    
T  5978 at-aatatatgtatctcaaattat 5956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11543 - 11448
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    ||||||||||||||||||||||| ||  |||||||||| | ||||| | || | |||| |||||| ||||| |||||||||||||| |||| |||||    
T  11543 gcagagacaacaacataaaacaaattg-caacatagcaacgttaatgacaaaaccttggatgatacaacaaaattattttctatatcatactttttc 11448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 34201 - 34107
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||||| |||| |||||||||| |||||||| |||||||||||    
T  34201 caacatagcaacattaataataacaacttgaatgatataaacaacaatatcttctatatcatacattttccacat-aatatatgtaactcaaatta 34107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 53; Significance: 9e-22; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 444 - 562
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatata-acaacattattttctatattataccttttccaca 101  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||  |||||||| |||| | |||||||||||| |||| |||||||||    
T  444 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 542  T
Q  102 taaatatatgcaactcaaatt 122  Q
    | |||||||| | ||||||||    
T  543 t-aatatatgtagctcaaatt 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 8699 - 8817
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatata-acaacattattttctatattataccttttccaca 101  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||  |||||||| |||| | |||||||||||| |||| |||||||||    
T  8699 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 8797  T
Q  102 taaatatatgcaactcaaatt 122  Q
    | |||||||| | ||||||||    
T  8798 t-aatatatgtagctcaaatt 8817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 52; Significance: 3e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 33573 - 33709
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||  | | ||||    
T  33573 cagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 33670  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  33671 t-aatatatgtatctcaaattattcaacaacaacattcac 33709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 50; Significance: 5e-20; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6122 - 6225
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||| ||||||  ||||||||||  ||||||||||| |||||||||||||| ||||||| || ||||||||| |||| |||||||    
T  6122 gcagagacaacaacataaa-caacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcca 6219  T
Q  100 cataaa 105  Q
    ||||||    
T  6220 cataaa 6225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8274 - 8377
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||| ||||||  ||||||||||  ||||||||||| |||||||||||||| ||||||| || ||||||||| |||| |||||||    
T  8274 gcagagacaacaacataaa-caacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcca 8371  T
Q  100 cataaa 105  Q
    ||||||    
T  8372 cataaa 8377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 48; Significance: 8e-19; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 11386 - 11518
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| |||||||| | | ||||||| ||||||||||||| | ||| ||| ||||||||||||| ||||||||| ||||  | | ||||| |    
T  11386 agacaacaacatacaacaacttga-accatagcaacattaataataaccatttggatggtataacaacatta-tttctatatcatacaatattcacat-a 11482  T
Q  105 atatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||||||| | |||||||||||||| |||||||||||    
T  11483 atatatgtacctcaaattattcaacaacaacattca 11518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 48; Significance: 8e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 15338 - 15202
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||| ||||||| ||||||||| ||||  | | ||||    
T  15338 cagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaaaacatta-tttctatatcatacaatattcaca 15241  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  15240 t-aatatatgtatctcaaattattcaacaacaacattcac 15202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 8e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 145960 - 146092
Alignment:
Q  6 gacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaa 105  Q
    |||||||||||| |||||||| | | | ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||  | | ||||| ||    
T  145960 gacaacaacatacaacaacttga-accgtagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatattcacat-aa 146056  T
Q  106 tatatgcaactcaaattattcaaaaacaacattcac 141  Q
    |||||| | ||||||||| |||| ||||||||||||    
T  146057 tatatgtatctcaaattaatcaacaacaacattcac 146092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 8e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 127253 - 127152
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccac 100  Q
    |||||||||||||||||||||| |||  |||||||||| | ||||||| ||||||||| ||||||||| ||||||||||||  ||| ||||| |||||||    
T  127253 gcagagacaacaacataaaacagcttg-caacatagcaactttaataacaacaacttggatgatataataacattattttccctatcatacc-tttccac 127156  T
Q  101 ataa 104  Q
    ||||    
T  127155 ataa 127152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 46; Significance: 1e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5040 - 5143
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||  ||||||  ||||||||||  ||||||||||| |||||||||||||| ||||||| || ||||||||| |||| |||||||    
T  5040 gcagagacaacaacataag-caacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcca 5137  T
Q  100 cataaa 105  Q
    ||||||    
T  5138 cataaa 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 326 - 428
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||  ||||||  ||||||||||  ||||||||||||||||||||||| || ||||||  |||||||||||| |||| |||||||    
T  326 gcagagacaacaacataag-caacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttcca 423  T
Q  100 cataa 104  Q
    |||||    
T  424 cataa 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3251 - 3353
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||||| ||||||  ||||||||||  ||||| |||||||||||||||| ||| ||||||  |||||||||||| |||| |||||||    
T  3251 gcagagacaacaacataaa-caacttg-caacatagcaatattaacaataacaacttgaatgttataaacaacgatattttctatatcatacattttcca 3348  T
Q  100 cataa 104  Q
    |||||    
T  3349 cataa 3353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 6862 - 6938
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||| |||||||||||||||||  |||||||| ||||||| |||||||||||| |||| ||||||||||||    
T  6862 caacatagcaacattaataataacaactcaaatgatataaacaacaatattttctatatcatacattttccacataa 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 44; Significance: 2e-16; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 7198 - 7334
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| |||||||||||||||| | |||| ||||  | | ||||    
T  7198 cagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacattatttcc-atatcatacaatattcaca 7295  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||| | |||| | |||||||||||||| ||||||||||||    
T  7296 taatt-tatgtatctcaaattattcaacaacaacattcac 7334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 11018 - 11154
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||| | ||||||| |||||||| | | ||||||| ||||||||||||| ||||  ||| ||||||||||||| ||||||| | ||||  | | ||||    
T  11018 cagagaaagcaacatacaacaacttga-atcatagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatattcaca 11115  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  11116 t-aatatatgtatctcaaattattcaacaacaacattcac 11154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10892 - 11012
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttcca 99  Q
    ||||||||||||||||| | ||||||  |||||||| | ||||||||||||||||||||||||||| || |||| |||  | ||||| |||| |||||||    
T  10892 gcagagacaacaacataga-caacttg-caacatagaaacattaataataacaacttgaatgatataaagaacaatatcatatatatcatacattttcca 10989  T
Q  100 cataaatatatgcaactcaaatta 123  Q
    ||| |||||||| |||||||||||    
T  10990 cat-aatatatgtaactcaaatta 11012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 44; Significance: 2e-16; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 6109 - 5973
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| |||||||||||||||| | |||| ||||  | | ||||    
T  6109 cagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacattatttcc-atatcatacaatattcaca 6012  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||| | |||| | |||||||||||||| ||||||||||||    
T  6011 taatt-tatgtatctcaaattattcaacaacaacattcac 5973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 806 - 670
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||| | ||||||| |||||||| | | ||||||| ||||||||||||| ||||  ||| ||||||||||||| ||||||| | ||||  | | ||||    
T  806 cagagaaagcaacatacaacaacttga-atcatagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatattcaca 709  T
Q  102 taaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    | |||||||| | |||||||||||||| ||||||||||||    
T  708 t-aatatatgtatctcaaattattcaacaacaacattcac 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 8e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 765 - 830
Alignment:
Q  19 aacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctata 85  Q
    |||||||| ||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||    
T  765 aacaactt-acaacatagcagcattaataacaacatcttggatgatataacaacattattttctata 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 8311 - 8375
Alignment:
Q  41 attaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| |||| ||||||||||||    
T  8311 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 8375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 2088 - 2013
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacata 103  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||  |||||||||| | |||| |||||||||||    
T  2088 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 2013  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 127589 - 127511
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||| |||| ||||| |||||||| | |||||||||    
T  127589 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaatta 127511  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 59565 - 59661
Alignment:
Q  7 acaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||||| ||||||  ||||||| || | ||||||||||||||| ||||||||| || |||| |||||||||||| |||| ||||||||||||    
T  59565 acaacaacataaa-caacttg-caacataacaacgttaataataacaactcgaatgatataaaaaacaatattttctatatcatacattttccacataa 59661  T

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Target: scaffold0188 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 447 - 370
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaa 105  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  || ||||||||| |||| |||| ||||||||    
T  447 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacatttttcacataaa 370  T

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Target: scaffold0117 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 41023 - 40958
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaa 105  Q
    |||||||||||||||||||||||||| ||||||  || ||||||||| |||| |||||||||||||    
T  41023 attaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataaa 40958  T

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Target: scaffold0825 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 1613 - 1549
Alignment:
Q  41 attaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| | || ||||||||||||    
T  1613 attaataataacaacttgaatgataataacaacgatattttctatatcaaacattttccacataa 1549  T

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Target: scaffold0607 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 2960 - 3024
Alignment:
Q  41 attaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||| |||||    
T  2960 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 3024  T

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Target: scaffold0429 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 2800 - 2724
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  ||||| |||||||||||||||||||| |||||   |||||||||||| |||| ||||||||||||    
T  2800 caacatagcaatattaaaaataacaacttgaatgatataaacaatgatattttctatatcatacattttccacataa 2724  T

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Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 6053 - 6117
Alignment:
Q  41 attaataataacaacttgaatgat-ataacaacattattttctatattataccttttccacataa 104  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| | || ||||||||||||    
T  6053 attaataataacaacttgaatgataataacaacgatattttctatatcacacattttccacataa 6117  T

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Target: scaffold1815 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 1242 - 1315
Alignment:
Q  5 agacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattt 79  Q
    ||||| ||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||||||||||    
T  1242 agacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacattattt 1315  T

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Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 839 - 775
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||||||||||| || |||  |||||||||| ||| |||||||||||||||||||||||||    
T  839 cagagacaacaacataaa-catcttg-caacatagcaacatcaataataacaacttgaatgatataa 775  T

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Target: scaffold0962 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1363 - 1300
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||| ||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||||    
T  1363 agagacagcaacataag-caactt-acaacatagcaatattaataataacaacttgaatgatataa 1300  T

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Target: scaffold0630 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 8304 - 8373
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  8304 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 8373  T

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Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 20889 - 20958
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  20889 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 20958  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 3120 - 3196
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||   ||||||||||| |||| |||||| |||||    
T  3120 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccccataa 3196  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 53446 - 53378
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| ||||||||||||||||||||||||| || | || |||| |||| |||| |||||    
T  53446 caacatagcaacatcaataataacaacttgaatgatataaaaataataatttccatatcatacattttc 53378  T

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Target: scaffold0047 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 78322 - 78416
Alignment:
Q  40 cattaataataacaacttgaatgatataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaaca 136  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||||  ||||  | | ||||| |||||||| | |||||||||||||| |||||||    
T  78322 cattaataataaccacttggatggtataacaacatta-tttctataccatacaatattcacat-aatatatgtatctcaaattattcaacaacaaca 78416  T

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Target: scaffold1633 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 431 - 559
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 101  Q
    |||||||| ||| ||| |||||||| | | ||||| | ||||||||||||| ||||| ||| |||||||| |||| ||||||||| ||||  | | ||||    
T  431 cagagacaccaatatacaacaacttga-atcatagaaacattaataataaccacttggatggtataacaatatta-tttctatatcatacaatattcaca 528  T
Q  102 taaatatatgcaactcaaattattcaaaaaca 133  Q
    | |||||||| | |||||||||||||| ||||    
T  529 t-aatatatgtatctcaaattattcaacaaca 559  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000003; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 16004 - 16043
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  16004 caacatagcaacatcaataataacaacttgaatgatataa 16043  T

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Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 17627 - 17691
Alignment:
Q  3 agagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    ||||||| ||||||||||||||||  |||||||||  |||||||| ||||| |||| |||||||||    
T  17627 agagacagcaacataaaacaactt-gcaacatagccacattaatactaacaccttggatgatataa 17691  T

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Target: scaffold0220; HSP #3
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 13186 - 13225
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| | ||| |||||||||||||||||||||||||    
T  13186 caacatagaaacatcaataataacaacttgaatgatataa 13225  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 66253 - 66346
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaatta 123  Q
    ||||||| || |||||||||||||||||| |||||||| ||||||| || ||||||||| ||||  |||||||||  ||||||| | |||||||||    
T  66253 caacataacaacattaataataacaactttaatgatatgaacaacaata-tttctatatcatacaatttccacat-catatatgtatctcaaatta 66346  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10745 - 10695
Alignment:
Q  1 gcagagacaacaacataaaacaacttcacaacatagcatcattaataataac 52  Q
    ||||||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  10745 gcagagacaacaacatacaacaacttca-atcatagcaacattaataataac 10695  T

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Target: scaffold0326 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 207 - 143
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||| |||||||||||    
T  207 cagagacagcaacataaa-caacttg-caacatagcaacgttaataataacaactcgaatgatataa 143  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 29441 - 29517
Alignment:
Q  63 atataacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattcac 141  Q
    ||||||||||||||||| |||||| ||||  | | ||||||| |||||| | |||||||||||||| ||||||||||||    
T  29441 atataacaacattattt-ctatatcatacaatattcacataa-tatatgtatctcaaattattcaacaacaacattcac 29517  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 12320 - 12262
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatat 86  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||||  ||||||||||||    
T  12320 caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatat 12262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 136416 - 136333
Alignment:
Q  40 cattaataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattat 124  Q
    ||||||||| ||||||||||||||||| ||||||| || ||||||||| ||||  ||| ||||| |||||||| | ||||||||||    
T  136416 cattaataacaacaacttgaatgatatgaacaacaata-tttctatatcatacaattttcacat-aatatatgtatctcaaattat 136333  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 19456 - 19387
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||| | ||| ||||||||||||||||||||||| ||||| | || ||||||||| |||| |||||    
T  19456 caacatagaaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 19387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 1700 - 1749
Alignment:
Q  2 cagagacaacaacataaaacaacttcacaacatagcatcattaataataa 51  Q
    |||||| | ||| ||| |||||||| ||||||||||||||||||||||||    
T  1700 cagagatagcaaaatacaacaacttaacaacatagcatcattaataataa 1749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 5657 - 5726
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatat-aacaacattattttctatattataccttttc 97  Q
    |||||||||| ||| |||||||||||||||||| |||| ||||| | || ||||||||| |||| |||||    
T  5657 caacatagcaacatcaataataacaacttgaattatataaacaataataatttctatatcatacattttc 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 2727 - 2667
Alignment:
Q  45 ataataacaacttgaatgatat-aacaacattattttctatattataccttttccacataa 104  Q
    |||||||| | ||||||||||| ||||||| |||||||||||| ||||  |||||||||||    
T  2727 ataataacgatttgaatgatatgaacaacaatattttctatatcatacaatttccacataa 2667  T

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Target: scaffold1695 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 625 - 714
Alignment:
Q  50 aacaacttgaatgatat-aacaacattattttctatattataccttttccacataaatatatgcaactcaaattattcaaaaacaacattca 140  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||||  | | ||||||| |||||| | |||||||||| ||| |||||||||||    
T  625 aacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatccaacaacaacattca 714  T

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Target: scaffold0028 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 63873 - 63838
Alignment:
Q  93 ttttccacataaatatatgcaactcaaattattcaa 128  Q
    |||| |||||||||||||| ||||||||||||||||    
T  63873 tttttcacataaatatatgtaactcaaattattcaa 63838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 159762 - 159723
Alignment:
Q  29 caacatagcatcattaataataacaacttgaatgatataa 68  Q
    |||||||||| |||  ||||||||||||||||||||||||    
T  159762 caacatagcaacatcgataataacaacttgaatgatataa 159723  T

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