View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5866-1 (Length: 276)
Name: Solexa-NF5866-1
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5866-1 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 36170684 - 36170464
Alignment:
| Q |
8 |
gttaacctttgctttaaactcctcactttgaaatccaagaccagaactttctgcatctacataagaggaaaataattgggttcttggtgattcaaattca |
107 |
Q |
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| T |
36170684 |
gttaacctttgctttaaactcctcacttttaaatccaagaccagaactttctgcatctacataagaggaaaataattgggttcttggtgattcaaattca |
36170585 |
T |
|
| Q |
108 |
gcttcctctgctgcattctgtaatttcaagagctgctcttgtaaaactctttgtgctttcctctcatatctcctctttaagcattcaacttcctttgcac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36170584 |
gcttcctctgctgcattctgtaatttcaagagctgctcttgtaaaactctttgtgctttcctctcatatctcctctttaagcattcaacttcctttgcac |
36170485 |
T |
|
| Q |
208 |
tctttgtttcattaagcaatt |
228 |
Q |
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||||||||||||||||||||| |
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| T |
36170484 |
tctttgtttcattaagcaatt |
36170464 |
T |
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