View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5866-10 (Length: 145)
Name: Solexa-NF5866-10
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5866-10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 137; Significance: 7e-72; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 137; E-Value: 7e-72
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39167358 - 39167214
Alignment:
| Q |
1 |
gagagatgaactacgaggtcccagacaaaatctcaatgattggtacaggtatgttggttttatggttgctctataggcaccttattgttcaaaagattga |
100 |
Q |
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| T |
39167358 |
gagaaatgaactacgaggtcccagacaaaatctcaatgattggtacaggtatattggttttatggttgctctataggcaccttattgttcaaaagattga |
39167259 |
T |
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| Q |
101 |
gtgttattctaaatttgtagaacaatagatgaattaaaacatagt |
145 |
Q |
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| T |
39167258 |
gtgttattctaaatttgtagaacaatagatgaattaaaacatagt |
39167214 |
T |
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