View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5866-2 (Length: 136)
Name: Solexa-NF5866-2
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5866-2 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 6e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 3099555 - 3099686
Alignment:
| Q |
3 |
cagagacagagctgatatcaataccagcaacaccaagagtgtcaacaccagagatactgacaccatcaggacaaaggtcaccaagacaaggatcaaagga |
102 |
Q |
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| T |
3099555 |
cagagacagagctgatatcaataccagcaacaccaagagtgtcaacaccagagatactgacaccatcaggacaaaggtcaccaagacaaggatcaaagga |
3099654 |
T |
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| Q |
103 |
agctaaatcatcaaatgcatggacaccaacat |
134 |
Q |
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| T |
3099655 |
agctaaatcatcaaatgcatggacaccaacat |
3099686 |
T |
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