View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5866-25 (Length: 121)
Name: Solexa-NF5866-25
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5866-25 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 98; Significance: 1e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 45013597 - 45013714
Alignment:
| Q |
4 |
agaccaagtgtatagtatatttcaatgtgagacttctaactcacattttccacaatagacaatgtcttatcccggtaaacgaatctctcccacacataag |
103 |
Q |
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| T |
45013597 |
agactaagtatatagtatatttcaatgtgagacttctaactcacattttccacagtagacaatgtcttgtcccggtaaacgaatctctcccaaacataag |
45013696 |
T |
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| Q |
104 |
cttactatttttcaaaca |
121 |
Q |
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| T |
45013697 |
cttactatttttcaaaca |
45013714 |
T |
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